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At least 73 records · Page 4Linked to original sources

Microbial diversity, genomics, and phage–host interactions of cyanobacterial harmful algal blooms

The occurrence of cyanobacterial harmful algal blooms (cyanoHABs) is related to their physical and chemical environment. However, less is known about their associated microbial interactions and processes. In this study, cyanoHABs were analyzed as a microbial ecosystem, using 1 year of 16S rRNA sequencing and 70 metagenomes collected during the bloom season from Lake Okeechobee (Florida, USA). Biogeographical patterns observed in microbial community composition and function reflected ecological zones distinct in their physical and chemical parameters that resulted in bloom “hotspots” near major lake inflows. Changes in relative abundances of taxa within multiple phyla followed increasing bloom severity. Functional pathways that correlated with increasing bloom severity encoded organic nitrogen and phosphorus utilization, storage of nutrients, exchange of genetic material, phage defense, and protection against oxidative stress, suggesting that microbial interactions may promote cyanoHAB resilience. Cyanobacterial communities were highly diverse, with picocyanobacteria ubiquitous and oftentimes most abundant, especially in the absence of blooms. The identification of novel bloom-forming cyanobacteria and genomic comparisons indicated a functionally diverse cyanobacterial community with differences in its capability to store nitrogen using cyanophycin and to defend against phage using CRISPR and restriction-modification systems. Considering blooms in the context of a microbial ecosystem and their interactions in nature, physiologies and interactions supporting the proliferation and stability of cyanoHABs are proposed, including a role for phage infection of picocyanobacteria. This study displayed the power of “-omics” to reveal important biological processes that could support the effective management and prediction of cyanoHABs.

Florida↗

Territories within groups: The dynamic competition of drift-feeding juvenile Chinook salmon in 3-dimensional space

Salmonid populations are often regulated by territorial competition among juveniles for food and space. In the canonical view, salmonid territories are spaced horizontally across the river bottom in a 2-D mosaic. However, some juveniles instead feed in tight, three-dimensional (3-D) social groups. To investigate whether territoriality is possible within such groups, we applied a new concept—the momentary home range—to quantify the size, exclusivity, and temporal dynamics of 3-D space use by juvenile Chinook Salmon ( Oncorhynchus tshawytscha ) in the Chena River, Alaska. Individual strategies spanned a broad continuum of exclusivity and stationarity. However, some of the largest, most dominant fish in each group aggressively defended stationary, exclusive feeding spaces and thus were unambiguously territorial. Transient floaters entered and left the group quickly. A majority of fish were not aggressive but nevertheless occupied exclusive, stationary spaces that probably function as territories with regard to resource distribution and population regulation. The presence of territoriality within social groups, in a 3-D configuration, expands the known domain of this important behavior.

Alaska↗

Spring mudflows at Wrightwood, Southern California

The Wrightwood area in the San Gabriel Mountains of southern California is known as a site of recurring mudflow activity. The community of Wrightwood is built on the coalesced fans of Sheep, Acorn and Heath Creeks, and the fan deposits are probably chiefly of mudflow origin. Historically, mudflows there have been observed in association with three climatic conditions: (1) short period of high-intensity rainfall during the summer dry season (thunderstorms); (2) periods of heavy rainfall during the October-March winter season, when most of the year's rain and snow fall; and (3) thaw of the winter snow pack. The mudflow activity associated with heavy rainfall has generally been of only a few hours or at most a few days duration. Mudflow activity associated with spring thaw has been of longer duration, as much as several weeks. At various times in the past, mudflows generated by all three conditions have inundated homes and highways in the Wrightwood area, which is now defended by a flood control levee system. During May and June, 1969 the rapid melting of a heavy snow pack resulted in a 40-day period of mudflow activity in Heath Creek. All flows originated in the steep upper reaches of Heath Creek, where steep ravines are incised in the toe of a large active landslide. Direct observation by the authors showed that flows formed when small masses of debris fell or slid from the surface of the landslide mass into the steep channel. Some of the masses were fluid enough to continue downstream without interruption; others stopped in the channel until remobilized by added melt water or the passage of a mudflow from a higher altitude. Both processes resulted in discrete ‘slugs’ which continued down the steep ravine, through an allu-viated canyon, to a fan where most of the debris was deposited. The activity may be described as a spring mudflow cycle, within which three stages were observed in a gradational sequence. A waxing stage began with sporadic short-duration mudflows, during which the lower alluviated canyon floor of Heath Creek was aggraded. A climactic stage of larger mudflows at more frequent intervals and of longer duration was characterized by the incision of a single, narrow, U-shaped channel in the alluviated canyon floor, and transportation of debris as much as 2 miles (3.2 km) from the source. A waning stage followed as meltwater supply decreased; short-duration flows backfilled the U-shaped channel and spilled over the banks, again aggrading the alluviated canyon floor.

California↗

Sex differences in the thermoregulation and evaporative water loss of a heterothermic bat, Lasiurus cinereus, during its spring migration

This study quantifies sex differences in thermoregulation and water loss of a small (20-35 g) insectivorous heterothermic mammal, the hoary bat Lasiurus cinereus , during its spring migration. We measured body temperature, metabolic rate and evaporative water loss, and calculated wet thermal conductance, for bats exposed to air temperatures ranging from 0 to 40°C for periods of 2-5 h. Pregnant females maintained normothermic body temperatures (35.7±0.7°C; mean ± s.e.m. ) independent of air temperature. In contrast, males became torpid during the majority (68%) of exposures to air temperatures <25°C. The thermal neutral zone (TNZ) ranged between approximately 30°C and 34°C in both sexes and, within the TNZ, females had lower mass-specific metabolic rates (6.1±0.2 mW g -1 ) than males (9.0±0.9 mW g -1 ). Wet thermal conductance values in torpid bats (0.7±0.5 mW g -1 deg. -1 ) were lower than those of normothermic individuals (1.1±0.3 mW g -1 deg. -1 ). Mass-specific rates of evaporative water loss in males were consistently higher than in females at most air temperatures and rates of water loss in torpid bats were 63±6% of normothermic values. These results suggest that male and pregnant female L. cinereus employ different thermoregulatory strategies during their spring migration. Females defend normothermic body temperatures, presumably to expedite embryonic growth, while males use torpor, presumably to minimize energy and water deficits. These variable thermoregulatory strategies may reflect continental differences in the summer distribution of the sexes.

Journal of Experimental Biology↗

Foraging optimally for home ranges

Economic models predict behavior of animals based on the presumption that natural selection has shaped behaviors important to an animal's fitness to maximize benefits over costs. Economic analyses have shown that territories of animals are structured by trade-offs between benefits gained from resources and costs of defending them. Intuitively, home ranges should be similarly structured, but trade-offs are difficult to assess because there are no costs of defense, thus economic models of home-range behavior are rare. We present economic models that predict how home ranges can be efficient with respect to spatially distributed resources, discounted for travel costs, under 2 strategies of optimization, resource maximization and area minimization. We show how constraints such as competitors can influence structure of homes ranges through resource depression, ultimately structuring density of animals within a population and their distribution on a landscape. We present simulations based on these models to show how they can be generally predictive of home-range behavior and the mechanisms that structure the spatial distribution of animals. We also show how contiguous home ranges estimated statistically from location data can be misleading for animals that optimize home ranges on landscapes with patchily distributed resources. We conclude with a summary of how we applied our models to nonterritorial black bears (Ursus americanus) living in the mountains of North Carolina, where we found their home ranges were best predicted by an area-minimization strategy constrained by intraspecific competition within a social hierarchy. Economic models can provide strong inference about home-range behavior and the resources that structure home ranges by offering falsifiable, a priori hypotheses that can be tested with field observations.

Journal of Mammalogy↗

Willow Flycatcher nonbreeding territory defense behavior in Costa Rica

We studied the intraspecific territorial defense behavior of wintering Willow Flycatchers (Empidonax traillii) in Costa Rica using a randomized playback experiment that exposed male and female birds to recordings of Willow Flycatcher songs and calls, Lesser Ground Cuckoo (Morococcyx erythropygius) vocalizations, and random noise. Flycatchers of both sexes responded most strongly to simulated conspecific territory intrusion, and the agonistic behaviors that we observed were similar to those seen during natural intraspecific encounters in winter. Both males and females engaged in song and aggressive behaviors in defense of territories, and there was no significant difference between the sexes in scored agonistic responses. The similarity between the sexes in intraspecific territorial defense behaviors and aggressiveness may account for both sexes of flycatchers using the same habitats at our study sites in Costa Rica, and wintering females defending territories against males. The Willow Flycatcher, a sexually monomorphic species, differs in this way from a number of sexually dimorphic passerines, in which behaviorally dominant males occur in more optimal winter habitats. ?? The Cooper Ornithological Society 2007.

The Condor↗

Sunrise nest attendance and aggression by least Bell's vireos fail to deter cowbird parasitism

We video-recorded three, natural, brood-parasitism events by Brown-headed Cowbirds ( Molothrus ater ) at nests of Least Bell's Vireos ( Vireo bellii pusillus ). All instances occurred near dawn, during both egg-laying and incubation stages of the nesting cycle. In each case, an adult vireo was on the nest when the female cowbird arrived. Both members of each parasitized pair vigorously attacked the intruding cowbird, but in no encounter did a pair of vireos successfully defend its nest from parasitism. Thus, Least Bell's Vireos in our study were unable to prevent a female cowbird from parasitizing their nests once the cowbird had reached the nest.

The Wilson Bulletin↗

Reply to “comment on ‘an evaluation of the timing accuracy of global and regional seismic stations and networks’ by Yang et al. (2021)” by Xin Zhang and Lianxing Wen

The finding of Yang et al. (2021 ; hereafter, YSR21) casts fundamental doubts on all the previous studies on the temporal changes of the inner core (IC) surface that are based on absolute arrival times, including Wen (2006 ; hereafter, WEN06) and its follow‐up studies. The reports of small time shifts of the IC‐reflected phase ( PKiKP ) likely misinterpreted station‐related issues (clock errors and instrument changes) as evidence for rapid localized deformation at the IC surface. The comment by Zhang and Wen (2024 ; hereafter, ZW24) aims at defending the results and conclusions of WEN06 by questioning a tiny portion of the results (2 out of over 400 doublets and 3 out of over 400 problematic stations) in YSR21. In response, we acknowledge an accidental error in table S1 of YSR21, which is corrected in an erratum ( Yang et al. , 2023 ), although this does not affect the results or interpretations of YSR21. However, we strongly disagree with the criticisms in ZW24 due to many problems therein, especially the issue of irreproducibility due to its inconsistent procedures with YSR21. While the problems are related to the use of absolute arrivals in the previous studies by Wen’s group, key problems in this new comment are related to questionable data selection and inconsistent processing. We further caution the metadata updates, particularly when involving small temporal change signals. We focus on the main points in ZW24 and demonstrate that its arguments are problematic in many aspects and do not diminish the credibility of YSR21 or other related works by Yang and Song in support of the IC differential rotation.

Seismological Research Letters↗

Breeding ecology of Wandering Tattlers Tringa incana: a study from south-central Alaska

Montane-nesting shorebirds are arguably the least studied of the Charadriiformes, owing in part to the remoteness of their breeding areas, low nesting densities, and specialized behaviors. We studied a marked population of the Wandering Tattler Tringa incana, during a three-year period (1997&ndash;1999) on nesting grounds in south-central Alaska. Two aspects of our results stand out. First is the previously undescribed preference for tattlers to nest several kilometers removed from pre-nesting feeding areas, mostly in association with both small (kettle) lakes and running water (near small distributaries of major drainages). Second is the apparent use of the study area by cohorts of birds of different breeding status, including (1) local breeders, which defended pre-breeding foraging areas, (2) local non-breeding birds, which remained on the area but were not territorial, and (3) transients that were captured later in the season, but not seen again on the area during the season of capture. We also found that (1) birds tended to nest in clusters despite what appeared to be the ample availability of nesting habitat, (2) they employed an inconspicuous&rsquo; nesting strategy whereby neither member of a pair betrayed its presence on the nesting area, and (3) females departed the area during early chick-rearing, leaving males to tend broods.

Alaska↗

Effects of stream enclosures on drifting invertebrates and fish growth

Stream ecologists often use enclosure experiments to investigate predator-prey interactions and competition within and among fish species. The design of enclosures, manipulation of species densities, and method of replication may influence experimental results. We designed an experiment with enclosure cages (1 m2, 6-mm mesh) to examine the relative influence of fish size, density, and prey availability on growth of brown trout (Salmo trutta), brook trout (Salvelinus fontinalis), and slimy sculpin (Cottus cognatus) within enclosures in Valley Creek, Minnesota. In addition, we examined water flow and invertebrate drift entering enclosures and in open riffles to investigate whether enclosures reduced the supply of invertebrate prey. Growth of small (age-0) brook and brown trout was not influenced by fish density, but growth of larger (age-1) trout generally decreased as density increased. Sculpin growth was not related to fish size or density, but increased with mean size of invertebrates in the drift. Enclosures reduced water flow and tended to reduce invertebrate drift rate, although total drift rate (ind./min), total drift density (ind./m3), and mean size of invertebrates were not significantly different inside enclosures compared to adjacent stream riffles. Enclosures had no effect on drift rate or size of Gammarus pseudolimnaeus, the main prey item for trout and sculpin in Valley Creek. Overall, our analyses indicated that reductions of prey availability by enclosures did not influence fish growth. Trout growth may have been limited at larger sizes and densities because of increased activity costs of establishing and defending territories, whereas sculpin growth was related to availability of large prey, a factor not influenced by enclosures. ?? 2006 by The North American Benthological Society.

Journal of the North American Benthological Societ↗

Some limitations on the possible composition of the ore-forming fluid

The activity ratios of various important anions (S (super =) , CO 3 (super =) , SO 4 (super =) , OH (super -) , F (super -) , and Cl (super -) ) in hydrothermal solutions at the time of deposition are evaluated using a simple thermodynamic technique. The ratios are interpreted in the light of the mineralogy of ore deposits and limits are placed on the variability of each ratio in hydrothermal solutions. All of the calculations are made for 25 degrees C and cautious extrapolation to higher temperatures seems justified; however, additional data for elevated temperatures and pressures are needed before more than approximate values may be assigned to these ratios in the ore-forming fluid.The calculated partial pressure of CO 2 in the ore fluid is generally less than one atmosphere, which suggests that a dense CO 2 phase cannot be considered an important ore fluid for most deposits. The partial pressure of H 2 S is usually less than 10 (super -4) atmosphere, which makes it extremely difficult to defend the theory that metals (other than the easily complexible mercury, arsenic, antimony, and perhaps gold and silver) are transported in quantity as complex sulfides or hydrosulfides. The sulfate to sulfide ratio is such that the oxidation potential at the time of deposition is defined by the following equation: Eh (in volts) = 0.22 + or - 0.04 - 0.059 pH.

Economic Geology↗

Density estimation in wildlife surveys

Several authors have recently discussed the problems with using index methods to estimate trends in population size. Some have expressed the view that index methods should virtually never be used. Others have responded by defending index methods and questioning whether better alternatives exist. We suggest that index methods are often a cost-effective component of valid wildlife monitoring but that double-sampling or another procedure that corrects for bias or establishes bounds on bias is essential. The common assertion that index methods require constant detection rates for trend estimation is mathematically incorrect; the requirement is no long-term trend in detection "ratios" (index result/parameter of interest), a requirement that is probably approximately met by many well-designed index surveys. We urge that more attention be given to defining bird density rigorously and in ways useful to managers. Once this is done, 4 sources of bias in density estimates may be distinguished: coverage, closure, surplus birds, and detection rates. Distance, double-observer, and removal methods do not reduce bias due to coverage, closure, or surplus birds. These methods may yield unbiased estimates of the number of birds present at the time of the survey, but only if their required assumptions are met, which we doubt occurs very often in practice. Double-sampling, in contrast, produces unbiased density estimates if the plots are randomly selected and estimates on the intensive surveys are unbiased. More work is needed, however, to determine the feasibility of double-sampling in different populations and habitats. We believe the tension that has developed over appropriate survey methods can best be resolved through increased appreciation of the mathematical aspects of indices, especially the effects of bias, and through studies in which candidate methods are evaluated against known numbers determined through intensive surveys.

Wildlife Society Bulletin↗

Depredation of common eider, Somateria mollissima, nests on a central Beaufort Sea barrier island: A case where no one wins

Along the central Beaufort Sea, Pacific Common Eiders ( Somateria mollissima v-nigra ) nest on unvegetated, barrier islands; often near nesting Glaucous Gulls ( Larus hyperboreus ). Nest-site choice likely reflects a strategy of predator avoidance: nesting on islands to avoid mammalian predators and near territorial gulls to avoid other avian predators. We observed a nesting colony of Common Eiders from first nest initiation through nesting termination on Egg Island near Prudhoe Bay, Alaska (2002 – 2003). Resident gulls depredated many eider nests, mostly during initiation. All nests failed when an Arctic Fox ( Alopex lagopus ) visited the island and flushed hens from their nests, exposing the eggs to depredation by the fox and gulls (resident and non-resident). Common Eiders actively defended nests from gulls, but not from foxes. Likely all three species (i.e., eiders, gulls, and foxes) ultimately achieved negligible benefit from their nest-site selection or predatory activity: (a) island nesting provided no safety from mammalian predators for eiders or gulls, (b) for Common Eiders, nesting near gulls increased egg loss, (c) for Glaucous Gulls, nesting near colonial eiders may have reduced nest success by attracting the fox, and (d) for Arctic Foxes, the depredation was of questionable value, as most eggs were cached and probably not recoverable (due to damage from fall storms). Thus, the predator-prey interactions we observed appear to be a case where little or no fitness advantage was realized by any of the species involved.

Canadian Field-Naturalist↗

Describing Willow Flycatcher habitats: scale perspectives and gender differences

We compared habitat characteristics of nest sites (female-selected sites) and song perch sites (male-selected sites) with those of sites unused by Willow Flycatchers ( Empidonax traillii ) at three different scales of vegetation measurement: (1) microplot (central willow [ Salix spp.] bush and four adjacent bushes); (2) mesoplot (0.07 ha); and, (3) macroplot (flycatcher territory size). Willow Flycatchers exhibited vegetation preferences at all three scales. Nest sites were distinguished by high willow density and low variability in willow patch size and bush height. Song perch sites were characterized by large central shrubs, low central shrub vigor, and high variability in shrub size. Unused sites were characterized by greater distances between willows and willow patches, less willow coverage, and a smaller riparian zone width than either nest or song perch sites. At all scales, nest sites were situated farther from unused sites in multivariate habitat space than were song perch sites, suggesting (1) a correspondence among scales in their ability to describe Willow Flycatcher habitat, and (2) females are more discriminating in habitat selection than males. Microhabitat differences between male-selected (song perch) and female-selected (nest) sites were evident at the two smaller scales; at the finest scale, the segregation in habitat space between male-selected and female-selected sites was greater than that between male-selected and unused sites. Differences between song perch and nest sites were not apparent at the scale of flycatcher territory size, possibly due to inclusion of (1) both nest and song perch sites, (2) defended, but unused habitat, and/or (3) habitat outside of the territory, in larger scale analyses. The differences between nest and song perch sites at the finer scales reflect their different functions (e.g., nest concealment and microclimatic requirements vs. advertising and territorial defense, respectively), and suggest that the exclusive use of either nest or song perch sites in vegetation analyses can result in misleading, or at least incomplete, descriptions of a species' habitat. Habitat interpretations for Willow Flycatchers (and perhaps for many passerines) are a function of the gender-specific behavior of the birds observed and the scale of vegetation measurement.

The Condor↗

Does nonrandom nest placement imply nonrandom nest predation?: A reply

In response to the critique by Schmidt and Whelan (Condor 101(4):916-920, 1999), we find that the relationship between nest success and tree selectivity is dependent upon inclusion or exclusion of particular tree species, whether or not years are pooled, and the selectivity index used. We question their use of point estimates of nest success with extremely high variances, defend our index, question the application of the Chesson (1983) index to our data, and explain the need to analyze years separately. Bottomland hardwood forest systems are extremely variable; hydroperiods alter the suitability of nesting substrates, availability of alternative food, and behavior of predators and their prey. Given these features, actively searching for Acadian Flycatcher (Empidonax virescens) nests is seldom an efficient predator foraging strategy. Therefore, these predation events are best described as random; nests are principally encountered opportunistically by generalist predators while searching for other prey.

Condor↗

Behavioral interactions of penned red and arctic foxes

Expansion of the geographical distribution of red foxes ( Vulpes vulpes ) into the far north tundra region may lead to competition between arctic ( Alopex lagopus ) and red foxes for space and resources. Behavioral interactions between red and arctic foxes were evaluated during 9 trials conducted in a 4.05-ha enclosure near Woodworth, North Dakota. Each trial consisted of introducing a male-female pair of arctic foxes into the enclosure and allowing them to acclimate for approximately a week before releasing a female red fox into the enclosure, followed by her mate a few days later. In 8 of 9 trials, red foxes were dominant over arctic foxes during encounters. Activity of the arctic foxes decreased upon addition of red foxes. Arctic foxes tried unsuccessfully to defend preferred den, resting, and feeding areas. Even though the outcome of competition between red and arctic foxes in the Arctic is uncertain, the more aggressive red fox can dominate arctic foxes in direct competition for den sites and other limited resources.

North Dakota↗

Social organization in a nesting population of eastern willets ( Catoptrophorus semipalmatus )

The breeding ecology of eastern Willets ( Catoptrophorus semipalmatus ) was studied over a 3-yr period in a salt marsh on the Atlantic coast of Virginia. During the study, 171 adults were color-marked. Willets are strictly monogamous and show strong site and mate fidelity from year to year. Normally a pair bond dissolves only after one member dies or fails to return in the spring. With an estimated annual adult mortality of 15%, the average life of a pair bond is 3 yr. The sexes share in most aspects of breeding, including brood-rearing, but females abandon both mate and brood about 2 weeks after the chicks hatch. Males apparently incubate at night and sometimes relieve the female at the nest during the middle of the day. In this area Willets defend separate nesting and feeding territories, though nest-site defense decreases through the incubation period. When mates are lost, males retain their original nesting and feeding territories, while females pair with available mates near their original nesting territory. Females compete for mates, and males select the most aggressive females. Nesting was particularly synchronous in lowland marsh sites, where the onset of egg laying was slightly earlier than in upland sites. Nest density was the highest reported for any scolopacid, and the highest densities were in sites closest to the marsh. Nest spacing is achieved through agonistic behavior, but there is evidence of a counter-tendency leading to nest clumping. Several features of the Willet social system resemble characteristics typical of colonial species of birds. These are discussed along with other aspects of social organization and the selective forces operating on it.

The Auk↗