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Methane fluxes between terrestrial ecosystems and the atmosphere at northern high latitudes during the past century: A retrospective analysis with a process-based biogeochemistry model
We develop and use a new version of the Terrestrial Ecosystem Model (TEM) to study how rates of methane (CH4) emissions and consumption in high-latitude soils of the Northern Hemisphere have changed over the past century in response to observed changes in the region's climate. We estimate that the net emissions of CH4 (emissions minus consumption) from these soils have increased by an average 0.08 Tg CH4 yr-1 during the twentieth century. Our estimate of the annual net emission rate at the end of the century for the region is 51 Tg CH4 yr-1. Russia, Canada, and Alaska are the major CH4 regional sources to the atmosphere, responsible for 64%, 11%, and 7% of these net emissions, respectively. Our simulations indicate that large interannual variability in net CH4 emissions occurred over the last century. Our analyses of the responses of net CH4 emissions to the past climate change suggest that future global warming will increase net CH4 emissions from the Pan-Arctic region. The higher net CH4 emissions may increase atmospheric CH 4 concentrations to provide a major positive feedback to the climate system. Copyright 2004 by the American Geophysical Union.
Manganese biogeochemistry in a small Adirondack forested lake watershed
I n September and October 1981, manganese (Mn) concentrations and p H were intensively monitored in a small forested lake watershed in the west-central Adirondack Mountains, New York, during two large acidic storms (each ∼5 cm rainfall, p H 4.61 and 4.15). The data were evaluated to identify biogeochemical pathways of Mn and to assess how these pathways are altered by acidic atmospheric inputs. Concentrations of Mn averaged 1.1 μg/L in precipitation and increased to 107 μg/L in canopy throughfall, the enrichment reflecting active biological cycling of Mn. Rain p H and throughfall Mn were negatively correlated, suggesting that foliar leaching of Mn was enhanced by rainfall acidity. The pulselike input of Mn to the forest floor in the high initial concentrations in throughfall (∼1000 μg/L) did not affect Mn concentrations in soil water (< 20 μg/L) or groundwater (usually < 40 μg/L), which varied little with time. In the inlet stream, Mn concentrations remained constant at 48 μg/L as discharge varied from 1.1 to 96 L/s. Manganese was retained in the vegetative cycle and regulated in the stream by adsorption in the soil organic horizon. The higher Mn levels in the stream may be linked to its high acidity (pH 4.2–4.3). Mixing of Mn-rich stream water with neutral lake water ( p H 7.0) caused precipitation of Mn and deposition in lake sediment.
Biogeochemistry: Hexadecane decay by methanogenesis
The potential for the biological conversion of long-chain saturated hydrocarbons to methane under anaerobic conditions has been demonstrated by using an enrichment culture of bacteria to degrade pure-phase hexadecane . The formation of methane in hydrocarbon-rich subsurface zones could be explained if a similar conversion of long-chain alkanes to methane were to take place in subsurface environments. If this process could be stimulated in the subsurface, it could be used to enhance hydrocarbon recovery from petroleum reserves . Parkes , however, questions the environmental significance of the enrichment-culture results 1 on the grounds that alkane conversion to methane is very slow and because sulphate-reducing and methanogenic bacteria might both be necessary for even this slow process to occur, restricting the conversion to specialized, unusual zones in sediments. Here we show that, on the contrary, subsurface bacteria can adapt to convert hexadecane to methane rapidly and in the absence of sulphate-reducing bacteria.
Biogeochemistry: unexpected uptake
Lichens, cyanobacteria, mosses and algae coat many terrestrial surfaces. These biological covers turn out to play an important role in the global cycling of carbon and nitrogen.
Integrating hydrology and biogeochemistry across frozen landscapes
Research has traditionally focused on atmospheric release of carbon from thawing permafrost, yet overlooked waterborne release pathways likely contribute significantly, especially in a warming Arctic. To address this knowledge gap and better constrain the fate of carbon in the North, we recommend inter-disciplinary efforts bridging physical, chemical and computational research.
Biogeochemistry of beetle-killed forests: Explaining a weak nitrate response
A current pine beetle infestation has caused extensive mortality of lodgepole pine ( Pinus contorta ) in forests of Colorado and Wyoming; it is part of an unprecedented multispecies beetle outbreak extending from Mexico to Canada. In United States and European watersheds, where atmospheric deposition of inorganic N is moderate to low (<10 kg⋅ha⋅y), disturbance of forests by timber harvest or violent storms causes an increase in stream nitrate concentration that typically is close to 400% of predisturbance concentrations. In contrast, no significant increase in streamwater nitrate concentrations has occurred following extensive tree mortality caused by the mountain pine beetle in Colorado. A model of nitrate release from Colorado watersheds calibrated with field data indicates that stimulation of nitrate uptake by vegetation components unaffected by beetles accounts for significant nitrate retention in beetle-infested watersheds. The combination of low atmospheric N deposition (<10 kg⋅ha⋅y), tree mortality spread over multiple years, and high compensatory capacity associated with undisturbed residual vegetation and soils explains the ability of these beetle-infested watersheds to retain nitrate despite catastrophic mortality of the dominant canopy tree species.
Biogeochemistry and water quality of the everglades: Symposium overview
[No abstract available]
Sulfur in the South Florida ecosystem: Distribution, sources, biogeochemistry, impacts, and management for restoration
Sulfur is broadly recognized as a water quality issue of significance for the freshwater Florida Everglades. Roughly 60% of the remnant Everglades has surface water sulfate concentrations above 1 mg l-1, a restoration performance measure based on present sulfate levels in unenriched areas. Highly enriched marshes in the northern Everglades have average sulfate levels of 60 mg l-1. Sulfate loading to the Everglades is principally a result of land and water management in South Florida. The highest concentrations of sulfate (average 60-70 mg l-1) in the ecosystem are in canal water in the Everglades Agricultural Area (EAA). Potential sulfur sourcesin the watershed are many, but geochemical data and a preliminary sulfur mass balance for the EAA are consistent with sulfur presently used in agricultural, and sulfur released by oxidation of organic EAA soils (including legacy agricultural applications and natural sulfur) as the primary sources of sulfate enrichment in the EAA canals. Sulfate loading to the Everglades increases microbial sulfate reduction in soils, leading to more reducing conditions, greater cycling of nutrients in soils, production of toxic sulfide, and enhanced methylmercury (MeHg) production and bioaccumulation. Wetlands are zones of naturally high MeHg production, but the combination of high atmospheric mercury deposition rates in South Florida and elevated sulfate loading leads to increased MeHg production and MeHg risk to Everglades wildlife and human consumers. Sulfate from the EAA drainage canals penetrates deep into the Everglades Water Conservation Areas, and may extend into Everglades National Park. Present plans to restore sheet flow and to deliver more water to the Everglades may increase overall sulfur loads to the ecosystem, and move sulfate-enriched water further south. However, water management practices that minimize soil drying and rewetting cycles can mitigate sulfate release during soil oxidation. A comprehensive Everglades restoration strategy should include reduction of sulfur loads as a goal because of the many detrimental impacts of sulfate on the ecosystem. Monitoring data show that the ecosystem response to changes in sulfate levels is rapid, and strategies for reducing sulfate loading may be effective in the near term. A multifaceted approach employing best management practices for sulfur in agriculture, agricultural practices that minimize soil oxidation, and changes to stormwater treatment areas that increase sulfate retention could help achieve reduced sulfate loads to the Everglades, with resulting benefits.
Spatial variability of CO2 concentrations and biogeochemistry in the Lower Columbia River
Carbon dioxide (CO 2 ) emissions from rivers and other inland waters are thought to be a major component of regional and global carbon cycling. In large managed rivers such as the Columbia River, contemporary ecosystem changes such as damming, nutrient enrichment, and increased water residence times may lead to reduced CO 2 concentrations (and emissions) due to increased primary production, as has been shown in another large North American river (Upper Mississippi). In this work, spatial patterns of water quality, including dissolved CO 2 concentrations, were assessed in the Lower Columbia River (LCR) and major tributaries using underway measurements from a small research vessel during July 2016. We observed near-equilibrium CO 2 conditions and overall weak supersaturation of CO 2 in the main channel (average 133.8% saturation) and tributaries. We observed only weak correlations between CO 2 saturation, chlorophyll a fluorescence, and turbidity, thus not strongly supporting our hypothesis of primary productivity controls. In general, the LCR was clear (low turbidity, mean = 1.48 FNU) and had low chlorophyll fluorescence (mean = 0.177 RFU) during the sampling period. As a whole, the LCR was homogeneous with respect to biogeochemical conditions and showed low spatial variability at >100 km scales. Overall, we find that the LCR is likely a weak summertime source of CO 2 to the atmosphere, in line with findings from other altered rivers such as the Upper Mississippi.
Coupled hydrology and biogeochemistry of Paleocene–Eocene coal beds, northern Gulf of Mexico
Thirty-six formation waters, gas, and microbial samples were collected and analyzed from natural gas and oil wells producing from the Paleocene to Eocene Wilcox Group coal beds and adjacent sandstones in north-central Louisiana, USA, to investigate the role hydrology plays on the generation and distribution of microbial methane. Major ion chemistry and Cl − Br relations of Wilcox Group formation waters suggest mixing of freshwater with halite-derived brines. High alkalinities (up to 47.8 meq/L), no detectable SO 4 , and elevated δ 13 C values of dissolved inorganic carbon (up to 20.5‰ Vienna Peedee belemnite [VPDB]) and CO 2 (up to 17.67‰ VPDB) in the Wilcox Group coals and adjacent sandstones indicate the dominance of microbial methanogenesis. The δ 13 C and δD values of CH 4 , and carbon isotope fractionation of CO 2 and CH 4 , suggest CO 2 reduction is the major methanogenic pathway. Geochemical indicators for methanogenesis drop off significantly at chloride concentrations above ∼1.7 mol/L, suggesting that high salinities inhibit microbial activity at depths greater than ∼1.6 km. Formation waters in the Wilcox Group contain up to 1.6% modern carbon (A 14 C) to at least 1690 m depth; the covariance of δD values of co-produced H 2 O and CH 4 indicate that the microbial methane was generated in situ with these Late Pleistocene or younger waters. The most enriched carbon isotope values for dissolved inorganic carbon (DIC) and CO 2 , and highest alkalinities, were detected in Wilcox Group sandstone reservoirs that were CO 2 flooded in the 1980s for enhanced oil recovery, leading to the intriguing hypothesis that CO 2 sequestration may actually enhance methanogenesis in organic-rich formations.
Biogeochemistry of microbial coal-bed methane
Microbial methane accumulations have been discovered in multiple coal-bearing basins over the past two decades. Such discoveries were originally based on unique biogenic signatures in the stable isotopic composition of methane and carbon dioxide. Basins with microbial methane contain either low-maturity coals with predominantly microbial methane gas or uplifted coals containing older, thermogenic gas mixed with more recently produced microbial methane. Recent advances in genomics have allowed further evaluation of the source of microbial methane, through the use of high-throughput phylogenetic sequencing and fluorescent in situ hybridization, to describe the diversity and abundance of bacteria and methanogenic archaea in these subsurface formations. However, the anaerobic metabolism of the bacteria breaking coal down to methanogenic substrates, the likely rate-limiting step in biogenic gas production, is not fully understood. Coal molecules are more recalcitrant to biodegradation with increasing thermal maturity, and progress has been made in identifying some of the enzymes involved in the anaerobic degradation of these recalcitrant organic molecules using metagenomic studies and culture enrichments. In recent years, researchers have attempted lab and subsurface stimulation of the naturally slow process of methanogenic degradation of coal.
Biogeochemistry of a temperate forest nitrogen gradient
Wide natural gradients of soil nitrogen (N) can be used to examine fundamental relationships between plant–soil–microbial N cycling and hydrologic N loss, and to test N-saturation theory as a general framework for understanding ecosystem N dynamics. We characterized plant production, N uptake and return in litterfall, soil gross and net N mineralization rates, and hydrologic N losses of nine Douglas-fir ( Pseudotsuga menziesii ) forests across a wide soil N gradient in the Oregon Coast Range (USA). Surface mineral soil N (0–10 cm) ranged nearly three-fold from 0.29% to 0.78% N, and in contrast to predictions of N-saturation theory, was linearly related to 10-fold variation in net N mineralization, from 8 to 82 kg N·ha −1 ·yr −1 . Net N mineralization was unrelated to soil C:N, soil texture, precipitation, and temperature differences among sites. Net nitrification was negatively related to soil pH, and accounted for <20% of net N mineralization at low-N sites, increasing to 85–100% of net N mineralization at intermediate- and high-N sites. The ratio of net : gross N mineralization and nitrification increased along the gradient, indicating progressive saturation of microbial N demands at high soil N. Aboveground N uptake by plants increased asymptotically with net N mineralization to a peak of 35 kg N·ha −1 ·yr −1 . Aboveground net primary production per unit net N mineralization varied inversely with soil N, suggesting progressive saturation of plant N demands at high soil N. Hydrologic N losses were dominated by dissolved organic N at low-N sites, with increased nitrate loss causing a shift to dominance by nitrate at high-N sites, particularly where net nitrification exceeded plant N demands. With the exception of N mineralization patterns, our results broadly support the application of the N-saturation model developed from studies of anthropogenic N deposition to understand N cycling and saturation of plant and microbial sinks along natural soil N gradients. This convergence of behavior in unpolluted and polluted forest N cycles suggests that where future reductions in deposition to polluted sites do occur, symptoms of N saturation are most likely to persist where soil N content remains elevated.
Biogeochemistry of a treeline watershed, northwestern Alaska
Since 1950, mean annual temperatures in northwestern Alaska have increased. Change in forest floor and soil temperature or moisture could alter N mineralization rates, production of dissolved organic carbon (DOC) and organic nitrogen (DON), and their export to the aquatic ecosystem. In 1990, we began study of nutrient cycles in the 800-ha Asik watershed, located at treeline in the Noatak National Preserve, northwestern Alaska. This paper summarizes relationships between topographic aspect, soil temperature and moisture, inorganic and organic N pools, C pools, CO 2 efflux, growing season net N mineralization rates, and stream water chemistry. Forest floor (O2) C/N ratios, C pools, temperature, and moisture were greater on south aspects. More rapid melt of the soil active layer (zone of annual freeze–thaw) and permafrost accounted for the higher moisture. The O2 C and N content were correlated with moisture, inorganic N pools, CO 2 efflux, and inversely with temperature. Inorganic N pools were correlated with temperature and CO 2 efflux. Net N mineralization rates were positive in early summer, and correlated with O2 moisture, temperature, and C and N pools. Net nitrification rates were inversely correlated with moisture, total C and N. The CO 2 efflux increased with temperature and moisture, and was greater on south aspects. Stream ion concentrations declined and DOC increased with discharge. Stream inorganic nitrogen (DIN) output exceeded input by 70%. Alpine stream water nitrate (NO − 3 ) and DOC concentrations indicated substantial contributions to the watershed DIN and DOC budgets.
The early Earth as an analogue for exoplanetary biogeochemistry
Planet Earth has evolved over the past 4.5 billion years from an entirely anoxic planet with possibly a different tectonic regime to the oxygenated world with horizontal plate tectonics that we know today. For most of this time, Earth has been inhabited by a purely microbial biosphere albeit with seemingly increasing complexity over time. A rich record of this geobiological evolution over most of Earth’s history thus provides insights into the remote detectability of microbial life under a variety of planetary conditions. Here we leverage Earth’s geobiological record with the aim of (a) illustrating the current state of knowledge and key knowledge gaps about the early Earth as a reference point in exoplanet science research; (b) compiling biotic and abiotic mechanisms that controlled the evolution of the atmosphere over time; and (c) reviewing current constraints on the detectability of Earth’s early biosphere with state-of-the-art telescope technology. We highlight that life may have originated on a planet with a different (stagnant lid) tectonic regime and strong hydrothermal activity, and under these conditions, biogenic CH 4 gas was perhaps the most detectable atmospheric biosignature. Oxygenic photosynthesis, which is responsible for essentially all O 2 gas in the modern atmosphere, appears to have emerged concurrently with the establishment of modern plate tectonics and the emergence of continental crust, but O 2 accumulation to modern levels only occurred late in Earth’s history, perhaps tied to the rise of land plants. Nutrient limitation in anoxic oceans, promoted by hydrothermal Fe fluxes, may have limited biological productivity and O 2 production. N 2 O is an alternative biosignature that was perhaps significant on the redox-stratified Proterozoic Earth. We conclude that the detectability of atmospheric biosignatures on Earth was not only dependent on biological evolution but also strongly controlled by the evolving tectonic context.
Biogeochemistry of aquatic humic substances in Thoreau's Bog, Concord, Massachusetts
Thoreau's Bog is an ombrotrophic floating—mat Sphagnum bog developed in a glacial kettlehole and surrounded by a red maple swamp. Concentrations of dissolved organic carbon in the porewater of the bog average 36 mg/L and are greatest near the surface, especially during late summer. This distribution suggest that the upper layer of living and dead Sphagnum and moderately humified peat is the major site of dissolved organic material production in the bog. The dissolved organic material consists mainly of aquatic fulvic acid (67%) and hydrophilic acids (20%); these organic acids control the pH (typically 4 or somewhat lower) of the bogwater. The elemental, amino acid, carbohydrate, and carboxylic acid contents of fulvic acid from the bog are similar to those of aquatic fulvic acid from the nearby Shawsheen River, although the phenolic hydroxyl content of fulvic acid from Thoreau's Bog is higher. The hydrophilic acids have greater amino acid, carbohydrate, and carboxylic acid contents than the fulvic acid, consistent with the hypothesis that hydrophilic acids are more labile intermediate compounds in the formation of fulvic acid.
Comparative effects of climate on ecosystem nitrogen and soil biogeochemistry in U.S. national parks. FY 2001 Annual Report (Res. Rept. No. 94)
In 1998, the USGS Global Change program funded research for a network of Long-Term Reference Ecosystems initially established in national parks and funded by the National Park Service. The network included Noland Divide, Great Smoky Mountains National Park, Tennessee; Pine Canyon, Big Ben National park, Texas; West Twin Creek, Olympic National Park, Washingtona?? Wallace Lake, Isle Royale National Park, Michigan; and the Asik watershed, Noatak National Preserve, Alaska. The watershed ecosystem model was used since this approach permits additional statistical power in detection of trends among variables, and the watershed in increasingly a land unit used in resource management and planning. The ecosystems represent a major fraction of lands administered by the National Park Service, and were chosen generally for the contrasts among sites. For example, tow of the site, Noland and West Twin, are characterized by high precipitation amounts, but Noland receives some of the highest atmospheric nitrogen (N) inputs in North America. In contrast, Pine Canyon and Asik are warm and cold desert sites respectively. The Asik watershed receives <1% the atmospheric N inputs Noland receives. The Asik site is at the northern extent (treeline) of the boreal biome in the North America while Wallace is at the southern ecotone between boreal and northern hardwoods. The research goal for these sites is to gain a basic understanding of ecosystem structure and function, and the response to global change especially atmospheric inputs and climate.