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Climate change effects on biodiversity, ecosystems, ecosystem services, and natural resource management in the United States

Climate change is a pervasive and growing global threat to biodiversity and ecosystems. Here, we present the most up-to-date assessment of climate change impacts on biodiversity, ecosystems, and ecosystem services in the U.S. and implications for natural resource management. We draw from the 4th National Climate Assessment to summarize observed and projected changes to ecosystems and biodiversity, explore linkages to important ecosystem services, and discuss associated challenges and opportunities for natural resource management. We find that species are responding to climate change through changes in morphology and behavior, phenology, and geographic range shifts, and these changes are mediated by plastic and evolutionary responses. Responses by species and populations, combined with direct effects of climate change on ecosystems (including more extreme events), are resulting in widespread changes in productivity, species interactions, vulnerability to biological invasions, and other emergent properties. Collectively, these impacts alter the benefits and services that natural ecosystems can provide to society. Although not all impacts are negative, even positive changes can require costly societal adjustments. Natural resource managers need proactive, flexible adaptation strategies that consider historical and future outlooks to minimize costs over the long term. Many organizations are beginning to explore these approaches, but implementation is not yet prevalent or systematic across the nation.

Science of the Total Environment

Sedimentological and radiochemical characteristics of marsh deposits from Assateague Island and the adjacent vicinity, Maryland and Virginia, following Hurricane Sandy

The effect of tropical and extratropical cyclones on coastal wetlands and marshes is highly variable and depends on a number of climatic, geologic, and physical variables. The impacts of storms can be either positive or negative with respect to the wetland and marsh ecosystems. Small to moderate amounts of inorganic sediment added to the marsh surface during storms or other events help to abate pressure from sea-level rise. However, if the volume of sediment is large and the resulting deposits are thick, the organic substrate may compact causing submergence and a loss in elevation. Similarly, thick deposits of coarse inorganic sediment may also alter the hydrology of the site and impede vegetative processes. Alternative impacts associated with storms include shoreline erosion at the marsh edge as well as potential emergence. Evaluating the outcome of these various responses and potential long-term implications is possible from a systematic assessment of both historical and recent event deposits. A study was conducted by the U.S. Geological Survey to assess the sedimentological and radiochemical characteristics of marsh deposits from Assateague Island and areas around Chincoteague Bay, Maryland and Virginia, following Hurricane Sandy in 2012. The objectives of this study were to (1) characterize the surficial sediment of the relict to recent washover fans and back-barrier marshes in the study area, and (2) characterize the sediment of six marsh cores from the back-barrier marshes and a single marsh island core near the mainland. These geologic data will be integrated with other remote sensing data collected along Assateague Island in Maryland and Virginia and assimilated into an assessment of coastal wetland response to storms. This report serves as an archive for sedimentological and radiochemical data derived from the surface sediments and marsh cores collected March 26–April 4, 2014. Select surficial data are available for the additional sampling periods October 21–30, 2014. Downloadable data are available as Excel spreadsheets and as JPEG files. Additional files include: Field documentation, x-radiographs, photographs, detailed results of sediment grain size analyses, and formal Federal Geographic Data Committee metadata ( data downloads ).

Maryland, Virginia

Volatile organic compounds in groundwater used for public supply across the United States: Occurrence, explanatory factors, and human-health context

This systematic assessment of occurrence for 85 volatile organic compounds (VOCs) in raw (untreated) groundwater used for public supply across the United States (U.S.), which includes 43 compounds not previously monitored by national studies, relates VOC occurrence to explanatory factors and assesses VOC detections in a human-health context. Samples were collected in 2013 through 2019 from 1537 public-supply wells in aquifers representing 78% of the volume pumped for public drinking-water supply. Laboratory detection limits for VOCs generally were less than 0.1 μg/L. Detections were reported for 36% of the sampled principal-aquifer area (38% of sampled wells) and were most common in wells in shallow, unconfined aquifers in urban areas that produce high proportions of modern-age and oxic groundwater. The disinfection by-product trichloromethane (chloroform) was the most commonly detected VOC associated primarily with anthropogenic sources (24% of the sampled area, 25% of sampled wells), followed by the gasoline oxygenate methyl tert-butyl ether (8.4% of area, 11% of wells). Carbon disulfide (12% of area, 14% of wells) was examined separately because of likely substantial contributions from natural sources. Newly monitored VOCs were each detected in <1% of the sampled area. Although detections of 1,4-dioxane in this first national study of its occurrence in raw groundwater were rare, measured concentrations exceeded the most stringent (non-enforceable) human-health benchmark in 0.5% of the sampled area (9 wells). Two wells had exceedances of enforceable benchmarks for tetrachloroethylene and trichloroethylene, and 50 wells total (representing 2.0% of the sampled area, 3.3% of sampled wells) had combined VOC concentrations exceeding 10% of benchmarks of any type. Compared with previous national findings, this study reports lower rates of VOC detection, but confirms widespread anthropogenic influence on groundwater used for public supply, with relatively few concentrations of individual VOCs or mixtures that approach or exceed human-health benchmarks.

Science of the Total Environment

Mercury exposure of tidal marsh songbirds in the northeastern United States and its association with nest survival

The biogeochemistry of tidal marsh sediments facilitates the transformation of mercury (Hg) into the biologically available form methylmercury (MeHg), resulting in elevated Hg exposures to tidal marsh wildlife. Saltmarsh and Acadian Nelson’s sparrows ( Ammospiza caudacutua and A. nelsoni subvirgatus , respectively) exclusively inhabit tidal marshes, potentially experiencing elevated risk to Hg exposure, and have experienced range-wide population declines. To characterize spatial and temporal variation of Hg exposure in these species, we sampled total mercury (THg) in blood collected from 9 populations spanning 560 km of coastline, including individuals resampled within and among years. Using concurrent nesting studies, we tested whether THg was correlated with nest survival probabilities, an index of fecundity. Blood THg ranged from 0.074–3.373 µg/g ww across 170 samples from 127 individuals. We detected high spatial variability in Hg exposure, observing differences of more than 45-fold across all individuals and 8-fold in mean blood THg among all study plots, including 4-fold between study plots within 4 km. Intraindividual changes in blood Hg exposure did not vary systematically in time but were considerable, varying by up to 2-fold within and among years. Controlling for both species differences and maximum water level, the dominant driver of fecundity in this system, nest survival probability decreased by 10% across the full range of female blood THg concentrations observed. We conclude that Hg has the potential to impair songbird reproduction, potentially exacerbating known climate-change driven population declines from sea-level rise in saltmarsh and Acadian Nelson’s sparrows.

Connecticut, Maine, New Hampshire, New Jersey

Preliminary assessment of channel stability and bed-material transport in the Tillamook Bay tributaries and Nehalem River basin, northwestern Oregon

This report summarizes a preliminary study of bed-material transport, vertical and lateral channel changes, and existing datasets for the Tillamook (drainage area 156 square kilometers [km 2 ]), Trask (451 km 2 ), Wilson (500 km 2 ), Kilchis (169 km 2 ), Miami (94 km 2 ), and Nehalem (2,207 km 2 ) Rivers along the northwestern Oregon coast. This study, conducted in coopera-tion with the U.S. Army Corps of Engineers and Oregon Department of State Lands to inform permitting decisions regarding instream gravel mining, revealed that: Study areas along the six rivers can be divided into reaches based on tidal influence and topography. The fluvial (nontidal or dominated by riverine processes) reaches vary in length (2.4-9.3 kilometer [km]), gradient (0.0011-0.0075 meter of elevation change per meter of channel length [m/m]), and bed-material composition (a mixture of alluvium and intermittent bedrock outcrops to predominately alluvium). In fluvial reaches, unit bar area (square meter of bar area per meter of channel length [m 2 /m]) as mapped from 2009 photographs ranged from 7.1 m 2 /m on the Tillamook River to 27.9 m 2 /m on the Miami River. In tidal reaches, all six rivers flow over alluvial deposits, but have varying gradients (0.0001-0.0013 m/m) and lengths affected by tide (1.3-24.6 km). The Miami River has the steepest and shortest tidal reach and the Nehalem River has the flattest and longest tidal reach. Bars in the tidal reaches are generally composed of sand and mud. Unit bar area was greatest in the Tidal Nehalem Reach, where extensive mud flats flank the lower channel. Background factors such as valley and channel confinement, basin geology, channel slope, and tidal extent control the spatial variation in the accumulation and texture of bed material. Presently, the Upper Fluvial Wilson and Miami Reaches and Fluvial Nehalem Reach have the greatest abundance of gravel bars, likely owing to local bed-material sources in combination with decreasing channel gradient and valley confinement. Natural and human-caused disturbances such as mass movements, logging, fire, channel modifications for navigation and flood control, and gravel mining also have varying effects on channel condition, bed-material transport, and distribution and area of bars throughout the study areas and over time. Existing datasets include at least 16 and 18 sets of aerial and orthophotographs that were taken of the study areas in the Tillamook Bay tributary basins and Nehalem River basin, respectively, from 1939 to 2011. These photographs are available for future assessments of long-term changes in channel condition, bar area, and vegetation establishment patterns. High resolution Light Detection And Ranging (LiDAR) surveys acquired in 2007-2009 could support future quantitative analyses of channel morphology and bed-material transport in all study areas. A review of deposited and mined gravel volumes reported for instream gravel mining sites shows that bed-material deposition tends to rebuild mined bar surfaces in most years. Mean annual deposition volumes on individual bars exceeded 3,000 cubic meters (m 3 ) on Donaldson Bar on the Wilson River, Dill Bar on the Kilchis River, and Plant and Winslow Bars on the Nehalem River. Cumulative reported volumes of bed-material deposition were greatest at Donaldson and Dill Bars, totaling over 25,000 m 3 per site from 2004 to 2011. Within this period, reported cumulative mined volumes were greatest for the Donaldson, Plant, and Winslow Bars, ranging from 24,470 to 33,940 m 3 . Analysis of historical stage-streamflow data collected by the U.S. Geological Survey on the Wilson River near Tillamook (14301500) and Nehalem River near Foss (14301000) shows that these rivers have episodically aggraded and incised, mostly following high flow events, but they do not exhibit systematic, long-term trends in bed elevation. Multiple cross sections show that channels near bridge crossings in all six study areas are dynamic with many subject to incision and aggradation as well as lateral shifts in thalweg position and bank deposition and erosion. In fluvial reaches, unit bar area declined a net 5.3-83.6 percent from 1939 to 2009. The documented reduction in bar area may be attributable to several factors, including vegetation establishment and stabilization of formerly active bar surfaces, lateral channel changes and resulting alterations in sediment deposition and erosion patterns, and streamflow and/or tide differences between photographs. Other factors that may be associated with the observed reduction in bar area but not assessed in this reconnaissance level study include changes in the sediment and hydrology regimes of these rivers over the analysis period. In tidal reaches, unit bar area increased on the Tillamook and Nehalem Rivers (98.0 and 14.7 percent, respectively), but declined a net 24.2 to 83.1 percent in the other four tidal reaches. Net increases in bar area in the Tidal Tillamook and Nehalem Reaches were possibly attributable to tidal differences between the photographs as well as sediment deposition behind log booms and pile structures on the Tillamook River between 1939 and 1967. The armoring ratio (ratio of the median grain sizes of a bar's surface and subsurface layers) was 1.6 at Lower Waldron Bar on the Miami River, tentatively indicating a relative balance between transport capacity and sediment supply at this location. Armoring ratios, however, ranged from 2.4 to 5.5 at sites on the Trask, Wilson, Kilchis, and Nehalem Rivers; these coarse armor layers probably reflect limited bed-material supply at these sites. On the basis of mapping results, measured armoring ratios, and channel cross section surveys, preliminary conclusions are that the fluvial reaches on the Tillamook, Trask, Kilchis, and Nehalem Rivers are currently sediment supply-limited in terms of bed material - that is, the transport capacity of the channel generally exceeds the supply of bed material. The relation between transport capacity and sediment is more ambiguous for the fluvial reaches on the Wilson and Miami Rivers, but transport-limited conditions are likely for at least parts of these reaches. Some of these reaches have possibly evolved from sediment supply-limited to transport-limited over the last several decades in response to changing basin and climate conditions. Because of exceedingly low gradients, all the tidal reaches are transport-limited. Bed material in these reaches, however, is primarily sand and finer grain-size material and probably transported as suspended load from upstream reaches. These reaches will be most susceptible to watershed conditions affecting the supply and transport of fine sediment. Compared to basins on the southwestern Oregon coast, such as the Chetco and Rogue River basins, these six basins likely transport overall less gravel bed material. Although tentative in the absence of actual transport measurements, this conclusion is supported by the much lower area and frequency of bars and longer tidal reaches along all the northcoast rivers examined in this study. Previous studies suggest that the expansive and largely unvegetated bars visible in the 1939 photographs are primarily associated with voluminous sedimentation starting soon after the first Tillamook Burn fire in 1933. However, USGS studies of temporal bar trends in other Oregon coastal rivers unaffected by the Tillamook Burn show similar declines in bar area over approximately the same analysis period. In the Umpqua and Chetco River basins, historical declines in bar area are associated with long-term decreases in flood magnitude. Other factors may include changes in the type and volume of large wood and riparian vegetation. Further characterization of hydrology patterns in these basins and possible linkages with climate factors related to flood peaks, such as the Pacific Decadal Oscillation, could support inferences of expected future changes in vegetation establishment and channel planform and profile. More detailed investigations of bed-material transport rates and channel morphology would support assessments of lateral and vertical channel condition and longitudinal trends in bed material. Such assessments would be most practical for the fluvial study areas on the Wilson, Kilchis, Miami, and Nehalem Rivers and relevant to several ongoing management and ecological issues pertaining to sand and gravel transport. Tidal reaches may also be logical subjects for indepth analysis where studies would be more relevant to the deposition and transport of fine sediment (and associated channel and riparian conditions and processes) rather than coarse bed material.

Oregon

Oblique Aerial Photography of the Arctic Coast of Alaska, Nulavik to Demarcation Point, August 7-10, 2006

The Arctic Coastal Plain of northern Alaska, an area of strategic economic importance to the United States, is home to remote Native American communities and encompasses unique habitats of global significance. Coastal erosion along the Arctic coast is chronic and widespread; recent evidence suggests that erosion rates are among the highest in the world (up to ~16 m/yr) and may be accelerating. Coastal erosion adversely impacts energy-related infrastructure, natural shoreline habitats, and Native American communities. Climate change is thought to be a key component of recent environmental changes in the Arctic. Reduced sea-ice cover in the Arctic Ocean is one of the probable mechanisms responsible for increasing coastal exposure to wave attack and the resulting increase in erosion. Extended periods of permafrost melting and associated decrease in bluff cohesion and stability are another possible source of the increase in erosion. Several studies of selected areas on the Alaska coast document past shoreline positions and coastal change, but none have examined the entire North coast systematically. Results from these studies indicate high rates of coastal retreat that vary spatially along the coast. To address the need for a comprehensive and regionally consistent evaluation of shoreline change along the North coast of Alaska, the U.S. Geological Survey (USGS), as part of their Coastal and Marine Geology Program's (CMGP) National Assessment of Shoreline Change Study, is evaluating shoreline change from Peard Bay to the United States/Canadian border, using historical maps and photography and a standardized methodology that is consistent with other shoreline-change studies along the Nation's coastlines (for example, URL http://coastal.er.usgs.gov/shoreline-change/ (last accessed March 2, 2009). This report contains photographs collected during an aerial-reconnaissance survey conducted in support of this study. An accompanying ESRI ArcGIS shape file (and plain-text copy) indicates the position of the aircraft and time when each photograph was taken. The USGS-CMGP Field Activity ID for the survey is A-1-06-AK, and more information on the survey and how to view the photographs using Google Earth software is available online at: URL http://walrus.wr.usgs.gov/infobank/a/a106ak/html/a-1-06-ak.meta.html (last accessed March 2, 2009).

Data Series

Wildlife health capacity enhancement in Thailand through the World Organisation for Animal Health Twinning Program

There is an increasing need for robust wildlife health programs that provide surveillance and management for diseases in wildlife and wild aquatic populations to manage associated risks. This paper illustrates the value of a systematic method to enhancing wildlife health programs. The U.S. Geological Survey and Mahidol University, Faculty of Veterinary Science, Thailand National Wildlife Health Center formally twinned under the auspices of the World Organisation for Animal Health to enhance wildlife health capacity in Thailand and the Southeast Asia Region. We used a system-wide approach to holistically and interdependently enhance capacity. The project commenced with a wildlife health program needs assessment, and capacity enhancement focused on strengthening the general wildlife health surveillance network and improving wildlife health information management. Activities included partner surveys, interactive and didactic workshops, and individual personnel training. Topics included development of wildlife health information management systems, analysis of the current surveillance network, development of a Theory of Change for a strengthened surveillance network, planning workshops to create a wildlife health network, training on wildlife disease outbreak investigation and field sample collection, leading networks, and individual training on bioinformatics and laboratory techniques. Engagement of stakeholders at all levels, continuous communication throughout the project, use of both strategic planning tools and pedagogical methods, and using iterative and adaptive approaches, were key factors to the success of this project.

Frontiers in Veterinary Science

The National Assessment of Shoreline Change: A GIS compilation of vector cliff edges and associated cliff erosion data for the California coast

The U.S. Geological Survey has generated a comprehensive data clearinghouse of digital vector cliff edges and associated rates of cliff retreat along the open-ocean California coast. These data, which are presented herein, were compiled as part of the U.S. Geological Survey's National Assessment of Shoreline Change Project. Cliff erosion is a chronic problem along many coastlines of the United States. As coastal populations continue to grow and community infrastructures are threatened by erosion, there is increased demand for accurate information including rates and trends of coastal cliff retreat. There is also a critical need for these data to be consistent from one region to another. One objective of this work is to a develop standard, repeatable methodology for mapping and analyzing cliff edge retreat so that periodic, systematic, and internally consistent updates of cliff edge position and associated rates of erosion can be made at a national scale. This data compilation for open-ocean cliff edges for the California coast is a separate, yet related study to Hapke and others, 2006 documenting shoreline change along sandy shorelines of the California coast, which is itself one in a series that includes the Gulf of Mexico and the Southeast Atlantic coast (Morton and others, 2004; Morton and Miller, 2005). Future reports and data compilations will include coverage of the Northeast U.S., the Great Lakes, Hawaii and Alaska. Cliff edge change is determined by comparing the positions of one historical cliff edge digitized from maps with a modern cliff edge derived from topographic LIDAR (light detection and ranging) surveys. Historical cliff edges for the California coast represent the 1920s-1930s time-period; the most recent cliff edge was delineated using data collected between 1998 and 2002. End-point rate calculations were used to evaluate rates of erosion between the two cliff edges. Please refer to our full report on cliff edge erosion along the California coastline at http://pubs.usgs.gov/of/2007/1133/ for additional information regarding methods and results (Hapke and others, 2007). Data in this report are organized into downloadable layers by region (Northern, Central and Southern California) and are provided as vector datasets with accompanying metadata. Vector cliff edges may represent a compilation of data from one or more sources and the sources used are included in the dataset metadata. This project employs the Environmental Systems Research Institute's (ESRI) ArcGIS as it's Geographic Information System (GIS) mapping tool and contains several data layers (shapefiles) that are used to create a geographic view of the California coast. The vector data form a basemap comprising polygon and line themes that include a U.S. coastline (1:80,000), U.S. cities, and state boundaries.

California

Contribution of natural history collection data to biodiversity assessment in national parks

There has been mounting interest in the use of museum and herbaria collections to assess biodiversity; information is often difficult to locate and access, however, and few recommendations are available for effectively using natural history collections. As part of an effort to inventory vertebrates and vascular plants in U.S. national parks, we searched manually and by computer for specimens originating within or adjacent to 14 parks throughout the northeastern United States. We compared the number of specimens located to collection size to determine whether there was any effect on detection rate of specimens. We evaluated the importance of park characteristics (e.g., age since establishment, size, theme [natural vs. cultural]) for influencing the number of specimens found in a collection. We located >31,000 specimens and compiled associated records (hereafter referred to as specimens) from 78 collections; >9000 specimens were park-significant, originating either within park boundaries or in the local township where the park was located. We found >2000 specimens by means of manual searches, which cost $0.001–0.15 per specimen searched and $0.81–151.95 per specimen found. Collection effort appeared relatively uniform between 1890 and 1980, with low periods corresponding to significant sociopolitical events. Detection rates for specimens were inversely related to collection size. Although specimens were most often located in collections within the region of interest, specimens can be found anywhere, particularly in large collections international in scope, suggesting that global searches will be necessary to evaluate historical biodiversity. Park characteristics indicated that more collecting effort occurred within or adjacent to larger parks established for natural resources than in smaller historical sites. Because many institutions have not yet established electronic databases for collections, manual searches can be useful for retrieving specimens. Our results show that thorough, systematic searching of natural history collections for park-significant specimens can provide a historical perspective on biodiversity for park managers.

Conservation Biology

Factors influencing counts in an annual survey of Snail Kites in Florida

Snail Kites ( Rostrhamus sociabilis ) in Florida were monitored between 1969 and 1994 using a quasi-systematic annual survey. We analyzed data from the annual Snail Kite survey using a generalized linear model where counts were regarded as overdispersed Poisson random variables. This approach allowed us to investigate covariates that might have obscured temporal patterns of population change or induced spurious patterns in count data by influencing detection rates. We selected a model that distinguished effects related to these covariates from other temporal effects, allowing us to identify patterns of population change in count data. Snail Kite counts were influenced by observer differences, site effects, effort, and water levels. Because there was no temporal overlap of the primary observers who collected count data, patterns of change could be estimated within time intervals covered by an observer, but not for the intervals among observers. Modeled population change was quite different from the change in counts, suggesting that analyses based on unadjusted counts do not accurately model Snail Kite population change. Results from this analysis were consistent with previous reports of an association between water levels and counts, although further work is needed to determine whether water levels affect actual population size as well as detection rates of Snail Kites. Although the effects of variation in detection rates can sometimes be mitigated by including controls for factors related to detection rates, it is often difficult to distinguish factors wholly related to detection rates from factors related to population size. For factors related to both, count survey data cannot be adequately analyzed without explicit estimation of detection rates, using procedures such as capture-recapture.

The Auk

Springs of California

In 1903 the United States Geological Survey began an investigation of the underground water of California, generally with financial cooperation on the part of the State. Since that year ten papers on the underground water of the State have been issued by the Survey, each representing an investigation that has been completed. The field work which is to serve as the basis for two additional papers has also been done and the reports are in preparation. Investigations have been begun in two other areas in the State and their results will eventually be assembled and published. Since a period soon after the inception of the California work those responsible for its conduct have realized the desirability of a special study of the springs, particularly those which yield mineral waters and which are utilized to a greater or less extent by citizens of the State and by tourists as recreation and health resorts. It did not become practicable to begin this work until the summer of 1908, when Mr. G. A. Waring, who had assisted in some of the earlier California studies and had investigated for the Survey certain areas in southern Oregon and Washington, was assigned to the task of collecting and assembling the necessary data. California, with an area of 158,000 square miles, is the second largest State in the Union. It exhibits wide geographic diversity, since it includes the lowest area in the United States Death Valley, 276 feet below sea level and the highest Mount Whitney, 14,501 feet above the sea; and accompanying this geographic diversity there is a corresponding range in scenic effects, climate, and vegetation. The records obtained at meteorological stations in the Salton Sink indicate a maximum temperature of 130° in the shade, the highest of record within the continental United States. It is probable that minimum temperatures on the higher peaks, like Mount Whitney and Mount Shasta, approach the minimum within our boundaries. Rainfall records in the most arid sections of the southern deserts of the State represent the extreme of aridity in the United States, with averages of less than 3 inches per annum and periods of 12 months or more with only traces of rain, whereas the precipitation in northwestern California is very heavy, an annual average of close to 100 inches being recorded at a few stations in Mendocino and Del Norte counties. The immensity of the area of the State has made the collection of the field data required for the report a task of considerable magnitude, though its diversity has added greatly to the interest of the work. In the original plan it was estimated that two years of field studies would prove sufficient. Mr. Waring succeeded in visiting the more important localities during this period, although some of his examinations were, of necessity, rather cursory. In midsummer, 1910, after the completion of the field work and the assembling of the greater portion of his data in manuscript form he was called by the Government of Brazil to take charge of general water supply investigations in the northeastern arid portion of that South American republic. The task of reviewing, editing, and supplementing in some respects, the results of his studies was thus unavoidably left to others. This task was rendered light by the systematic form in which Mr. Waring's material was left. It was a matter of regret to Mr. Waring, as it has been to those associated with him, that the financial limitations which controlled his work made it impracticable to procure the large number of new analyses which are particularly important in a paper of this type, in which waters of unusual chemical characteristics are discussed. Such analyses as are available have been assembled from all possible sources and combined with those which were prepared especially in connection with this investigation. The result, although it is in some respects unsatisfactory, furnishes a basis for a general view of the characteristics of the spring waters and serves to permit, their classification in a general way. Mr. Herman Stabler has reviewed the chemical data and rearranged and interpreted the available analyses. It is hoped that the report, setting forth as it does the results of impartial observations upon one of the important present and more important prospective resources of the State, will prove of value to its citizens as well as to its visitors, and that the assembled material will not be without interest to physicians, chemists, geologists, and teachers who may have especial need for the information contained in the volume.

California

Origin and properties of hydrothermal tremor at Lone Star Geyser, Yellowstone National Park, USA

Geysers are rare geologic features that intermittently discharge liquid water and steam driven by heating and decompression boiling. The cause of variability in eruptive styles and the associated seismic signals are not well understood. Data collected from five broadband seismometers at Lone Star Geyser, Yellowstone National Park are used to determine the properties, location, and temporal patterns of hydrothermal tremor. The tremor is harmonic at some stages of the eruption cycle and is caused by near‐periodic repetition of discrete seismic events. Using the polarization of ground motion, we identify the location of tremor sources throughout several eruption cycles. During preplay episodes (smaller eruptions preceding the more vigorous major eruption), tremor occurs at depths of 7–10 m and is laterally offset from the geyser's cone by ~5 m. At the onset of the main eruption, tremor sources migrate laterally and become shallower. As the eruption progresses, tremor sources migrate along the same path but in the opposite direction, ending where preplay tremor originates. The upward and then downward migration of tremor sources during eruptions are consistent with warming of the conduit followed by evacuation of water during the main eruption. We identify systematic relations among the two types of preplays, discharge, and the main eruption. A point‐source moment tensor fit to low‐frequency waveforms of an individual tremor event using half‐space velocity models indicates average V S ≳ 0.8 km/s, source depths ~4–20 m, and moment tensors with primarily positive isotropic and compensated linear vector dipole moments.

Wyoming

Per- and polyfluoroalkyl substances (PFAS) in drinking water in Southeast Los Angeles: Industrial legacy and environmental justice

Per - and polyfluoroalkyl substances (PFAS) are persistent chemicals of increasing concern to human health. PFAS contamination in water systems has been linked to a variety of sources including hydrocarbon fire suppression activities, industrial and military land uses, agricultural applications of biosolids, and consumer products. To assess PFAS in California tap water, we collected 60 water samples from inside homes in four different geographic regions, both urban and rural. We selected mostly small water systems with known history of industrial chemical or pesticide contamination and that served socioeconomically disadvantaged communities. Thirty percent of the tap water samples (18) had a detection of at least one of the 32 targeted PFAS and most detections (89 %) occurred in heavily industrialized Southeast Los Angeles (SELA). The residents of SELA are predominately Latino and low-income. Concentrations of perfluorooctanoic acid (PFOA) and perfluorooctanesulfonic acid (PFOS) ranged from 6.8 to 13.6 ng/L and 9.4–17.8 ng/L, respectively in SELA and were higher than State (PFOA: 0.007 ng/L; PFOS: 1.0 ng/L) and national health-based goals (zero). To look for geographic patterns, we mapped potential sources of PFAS contamination, such as chrome plating facilities, airports, landfills, and refineries, located near the SELA water systems; consistent with the multiple potential sources in the area, no clear spatial associations were observed. The results indicate the importance of systematic testing of PFAS in tap water, continued development of PFAS regulatory standards and advisories for a greater number of compounds, improved drinking-water treatments to mitigate potential health threats to communities, especially in socioeconomically disadvantaged and industrialized areas.

California

Rebuilding after collapse: evidence for long-term cohort dynamics in the native Hawaiian rain forest

Questions: Do long-term observations in permanent plots confirm the conceptual model of Metrosideros polymorpha cohort dynamics as postulated in 1987? Do regeneration patterns occur independently of substrate age, i.e. of direct volcanic disturbance impact? Location: The windward mountain slopes of the younger Mauna Loa and the older Mauna Kea volcanoes (island of Hawaii, USA). Methods: After widespread forest decline (dieback), permanent plots were established in 1976 in 13 dieback and 13 non-dieback patches to monitor the population structure of M. polymorpha at ca. 5-yr intervals. Within each plot of 20 × 20 m, all trees with DBH >2.5 cm were individually tagged, measured and tree vigour assessed; regeneration was quantified in 16 systematically placed subplots of 3 × 5 m. Data collected in the subplots included the total number of M. polymorpha seedlings and saplings (five stem height classes). Here we analyse monitoring data from six time steps from 1976 to 2003 using repeated measures ANOVA to test specific predictions derived from the 1987 conceptual model. Results: Regeneration was significantly different between dieback and non-dieback plots. In dieback plots, the collapse in the 1970s was followed by a ‘sapling wave’ that by 2003 led to new cohort stands of M. polymorpha. In non-dieback stands, seedling emergence did not result in sapling waves over the same period. Instead, a ‘sapling gap’ (i.e. very few or no M. polymorpha saplings) prevailed as typical for mature stands. Canopy dieback in 1976, degree of recovery by 2003 and the number of living trees in 2003 were unrelated to substrate age. Conclusions: Population development of M. polymorpha supports the cohort dynamics model, which predicts rebuilding of the forest with the same canopy species after dieback. The lack of association with substrate age suggests that the long-term maintenance of cohort structure in M. polymorpha does not depend on volcanic disturbance but may be related to other environmental mechanisms, such as climate anomalies.

Hawai'i

Enhancements to population monitoring of Yellowstone grizzly bears

In the Greater Yellowstone Ecosystem, counts of female grizzly bears ( Ursus arctos ) with cubs-of-the-year (females with cubs) from systematic aerial surveys and opportunistic ground sightings are combined with demographic data to derive annual population estimates. We addressed 2 limitations to the monitoring approach. As part of a rule set, a conservative distance of > 30 km currently is used as a threshold to assign sightings to unique females with cubs, resulting in underestimation bias. Using telemetry locations of females with cubs collected during 1997–2019, we created 1,000 data sets for each of 5 levels of simulated number of females with cubs, simulated sightings by selecting among these locations, and evaluated the classification performance of alternative distance criteria (12–30 km). Under all scenarios, 12–16-km criteria maximized classification performance and minimized estimation bias; the 16-km criterion was optimal for current conditions and sampling efforts. Our second objective was to test generalized additive models (GAMs) as a flexible trend analysis technique. We simulated 1,000 time series for each of 10 scenarios (10, 15, and 20% decline over periods of 5, 10, and 15 yrs, plus stability), applied GAMs, and assessed metrics associated with the posterior distribution of the instantaneous rate of change. We detected declines among > 99.6% of replicates under the 15 and 20% decline scenarios and in 84.7–94.7% of replicates under the 10% decline scenario. From decline onset to first detection, periods ranged from 3.7 (20% decline over 5 yrs) to 11.1 (10% decline over 15 yrs), with 3.9–8.8 years mean duration of detection events. The GAM approach allows detection of directional changes in population trend, including early warning metrics, and stabilization after such changes. Retrospective application of the 16-km distance criterion and GAMs resulted in higher population estimates and growth rates than are reported using current methods.

Wyoming

Elk monitoring in Lewis and Clark National Historical Park: 2008-2012 synthesis report

Maintaining elk (Cervus elaphus roosevelti) herds that frequent Lewis and Clark National Historical Park (NHP) is central to the park’s purpose of preserving the historic, cultural, scenic, and natural resources associated with the winter encampment of the Lewis and Clark expedition. Elk were critically important to the Lewis and Clark expedition in providing food and hides that sustained the expedition during the winter of 1805-06 and supplied them for their return east during 1806. Today, elk remain a key component of interpreting the Lewis and Clark story to over 200,000 park visitors each year at the Fort Clatsop visitor center. In 2008, the US Geological Survey (USGS) began collaborating with Lewis and Clark NHP and the NPS North Coast and Cascades Network to develop a protocol for monitoring long-term changes in the magnitude and spatial patterns of elk use within and adjacent to Lewis and Clark NHP (Griffin et al. 2011). Specific objectives of the monitoring program were to measure trends in (1) relative use of the Fort Clatsop unit by elk during winter; (2) the proportion of areas where elk sign is present in the Fort Clatsop unit in winter; and (3) the frequency of elk sightings from roads in and around the Fort Clatsop unit. This report synthesizes the results of the first four years of monitoring elk distribution and use in Lewis and Clark NHP from 2008-2012. We also present data from FY2012 (Appendix 1), in lieu of an annual report for that year. We used fecal pellet group surveys as the cornerstone for monitoring trends in both relative use of the Fort Clatsop Unit by elk and the proportion of areas where elk sign was present at the end of winter. We estimated pellet group density based on data collected from a network of fecal pellet plots distributed systematically throughout the unit. We developed a double observer sampling scheme that enabled us to estimate detection biases and improve the accuracy of pellet group density estimates. We computed the estimated detection probability for any pellet group observed; this probability was a function of the pellet group size and stage of decay, as well as lighting and vegetation conditions, and the number of observers (one or two) searching for pellets in that subplot. We then used these estimated detection probabilities to adjust the raw counts of the detected pellet groups to account for groups that likely went undetected under similar pellet and environmental conditions (each observed pellet group was weighted by the inverse of its estimated detection probability). We also used results from the late winter fecal pellet surveys to quantify the proportion of areas where elk pellets occurred (PAO), which was based on the presence of fecal pellet groups and estimation of detection biases (i.e., accounting for pellet groups that likely went undetected by both observers). In this synthesis, we report temporal trends in both pellet group density and PAO from 2008-2012, based on weighted linear regression analyses as well as spatial variation of pellet group densities over time. We completed late winter fecal pellet surveys at 61-66 plots annually, depending on yearly variation in access. We cleared fecal pellets at survey points in late October / early November each year and returned in late February / early March to count pellet groups left by elk over the winter. The estimated probability that a pellet group was detected by any one observer during late winter was affected most by the pellet group size and was less affected by decay class and lighting conditions. Per-observer detection probabilities ranged from as low as ~10-15% for single pellets to ~85-90% for pellet groups with 50 pellets. Average pellet group density in the Fort Clatsop unit ranged annually from 0.58 (+/- 1.43 standard error [SE]) to 0.93 (+/- 2.25 SE) pellet groups per 3-m radius subplot. Pellet group density declined over time, at approximately 8.8% per year (+/- 2.5% SE), but that slope was not statistically distinguishable from zero (2- tailed P=0.16). Following correction for detection biases, the proportion of surveyed points used by elk (i.e., PAO) ranged from 0.44 (+/- 0.07 SE) to 0.53 (+/- 0.07 SE) during the 4 winters. The estimated proportion of areas where elk pellets occurred (PAO) declined at a rate of 2.6% per year (+/- 1.2% per year SE), but that trend also was not statistically distinguishable from zero (2- tailed P=0.17). Statistical significance of a measure’s trend depends on both the magnitude (i.e., slope) of the observed trend and the number of years the trend continues in the same increasing or decreasing direction. Through simulation modeling we determined how many additional years of surveys would be required to reveal a statistically significant trend, based on the same trends in pellet group density and PAO, and associated variation, observed from 2009-2012. Assuming the same trends persist in the future, simulations indicated that there is a 70% probability that a statistically significant trend would be detected after two more years of conducting pellet group surveys. Relative use by elk during winter, as indexed by elk pellet group density, was generally greatest in the southeast region of the Fort Clatsop unit in or near the large freshwater marsh at the mouth of Colewort Creek and adjacent upland areas. Pellet group density was also higher than average in the north-central forested area, not far from a privately-owned pasture north of the park boundary. This spatial pattern in pellet group densities across the Fort Clatsop unit was consistent across all four years, although specific pellet group densities varied from year to year. Pellet group density declined significantly over time at two points in the southeast of the Fort Clatsop unit, even though pellet group density at those points remained higher than the unit average. Pellet group density increased significantly over time at one point in the north-central region, and at one point in the south-central region of the unit, indicating a slight shift in the distribution of elk use within the Fort Clatsop Unit over the four years. As an index of visitors’ opportunities to see elk in and around the Fort Clatsop Unit, we conducted replicated roadside elk surveys 3-5 times monthly during February, April, June, August, October and December 2008-2012. During each morning of survey, we searched for elk along four routes that totaled 32 km. We examined bimonthly trends in the numbers of elk groups seen, the total number of elk seen, and the observed composition ratios for those six months of the year. The average number of elk groups seen per survey ranged from 0.75 (+/- 0.32 SE) during February to a peak of 1.95 (+/- 0.36 SE) during June. Despite this seasonal variation in numbers of elk groups seen, the average total number of elk seen per morning was less variable. The average ratios of antlered elk to antlerless adult elk (i.e., bulls:cows) and calves to antlerless adult elk (i.e. calves:cows) varied seasonally, with the highest of both average ratios observed in August. We detected no significant trends in the average number of elk groups and total numbers of elk seen per survey from 2008-2012. Similarly, ratios of calves and antlered elk per antlerless elk did not differ over time. Elk groups were frequently seen from January to August in the southeast region of the Fort Clatsop unit, in the vicinity of Colewort Creek. Outside of NPS lands, we observed elk most frequently in open areas near the Astoria regional airport, in the pastures and forests immediately north of the Fort Clatsop unit and, prior to the construction of a residential development, in a pasture northwest of the Fort Clatsop unit. Elk monitoring at Lewis and Clark NHP is still in its initial years and additional monitoring will be required to verify trends that appear to be emerging. For example, the initial monitoring suggested incipient declining trends in both pellet group density and proportion of plots with pellets present, as well as, potentially, a small shift in elk distribution away from a new trail that was recently constructed in the southeast portion of the Fort Clatsop unit. Continued monitoring will aid in determining whether this local change in distribution persists (or, alternatively, resulted from short-term random variation), and whether there will be any positive or negative effect in the northern portion of the unit where a new trail has been constructed. High variability in road counts prevented our ability to find any clear trend in numbers or composition of elk observed in and near Fort Clatsop, but changes in the patterns of observations of elk from roadways suggest that residential development outside the park has reduced the available habitat for elk in some of the areas surveyed, and may have affected spatial use patterns of elk adjacent to some areas of the park. In addition to monitoring future effects of land use changes outside the park, continued monitoring may also prove useful for assessing elk responses to natural succession in forests disturbed by windthrow in December 2007 and to NPS vegetation management activities such as variable density thinning in the forest, trail development, and restoration at Otter Point tidal area and Colewort Creek Slough.

Oregon;Washington

The drought of 1998-2002 in North Carolina — Precipitation and hydrologic conditions

Drought conditions prevailed across much of North Carolina during 1998-2002, resulting in widespread record-low streamflow and ground-water levels in many areas. During this 4-year period, the drought was continuous in areas of western North Carolina, although eastern areas of the State had some periods of relief from tropical storms in 1998 and 1999. The occurrence of dry winters in 2001 and 2002 along with a dry spring in 2002, exacerbated drought conditions across the State and resulted in substantial declines in streamflow and ground-water levels during the summer of 2002. The drought caused widespread hardship and economic losses across North Carolina. During the latter months of 2002, more than 200 municipalities that included most major cities operated under some form of voluntary, mandatory, or emergency water conservation. Reservoirs across North Carolina were at record or near record-low levels, including some of the largest ones used for multiple purposes (flood control, low-flow augmentation, and(or) recreation), and required continuous and careful operation to balance the upstream and downstream needs of users. Precipitation deficits during the 1998-2002 drought for some locations in North Carolina were among the largest documented since the beginning of systematic collection of weather data. The largest deficits occurred primarily in the western Piedmont and were as much as 60 to 70 inches in some locations during the 4-year period. Cumulative monthly precipitation departures for the period May 1998 through September 2002 at 13 selected precipitation sites across the State ranged from 5.3 inches below normal in Greenville (eastern North Carolina) to 66.7 inches below normal in Hickory (western North Carolina). During the 12-month period October 2002 through September 2003, precipitation departures at 7 of the 13 sites were more than 20 inches above normal, primarily in the western Piedmont. Precipitation data for the period of record were examined for 8 of the 13 sites to compare precipitation deficits during the 1998-2002 drought with those that occurred during selected historical droughts. At three of the eight sites (Hickory, Charlotte, and Mocksville), the average monthly deficit for the 1998-2002 drought exceeded the values computed for the other drought periods. Precipitation records for three other sites (Greensboro, Raleigh, and Fayetteville) were adjusted to remove monthly rainfall values associated with several large tropical storms in 1999. The average monthly deficits for the 1998-2002 drought based on adjusted records for these three sites were then determined to be the highest among the drought periods identified during the available periods of precipitation record. Daily mean discharges before and after the drought were compiled for 211 continuous-record gaging stations operated in North Carolina in 2002. Of these 211, 150 stations had periods of record that exceeded 10 years. Among these 150 sites, records of lowest daily mean discharge were set at 65 sites during the 4-year drought (55 sites during the 2002 water year alone). A smaller group of 68 sites having 30 years of uninterrupted record through the 2002 water year and not known to be significantly affected by regulation and(or) diversions was selected for further analyses to quantify the 'daily' percentile and recurrence intervals of 7-day average discharges. Comparisons of minimum 7-day average discharges at six selected gaging stations with long-term records (two from each physiographic province in the State) provided insight into how the 1998-2002 drought compares with previous droughts. At three of the six sites, all located in the Blue Ridge and Piedmont Provinces, the minimum 7-day average discharges during the 1998-2002 drought became the minimum flows of record. One of these three sites, the French Broad River at Asheville, has the longest period of discharge records in North Carolina. These comparisons confirmed that th

North Carolina

Using bottom trawls to monitor subsurface water clarity in marine ecosystems

Biophysical processes that affect subsurface water clarity play a key role in ecosystem function. However, subsurface water clarity is poorly monitored in marine ecosystems because doing so requires in-situ sampling that is logistically difficult to conduct and sustain. Novel solutions are thus needed to improve monitoring of subsurface water clarity. To that end, we developed a sampling method and data processing algorithm that enable the use of bottom trawl fishing gear as a platform for conducting subsurface water clarity monitoring using trawl-mounted irradiance sensors without disruption to fishing operations. The algorithm applies quality control checks to irradiance measurements and calculates the downwelling diffuse attenuation coefficient, K d , and optical depth, ζ – apparent optical properties (AOPs) that characterize the rate of decrease in downwelling irradiance and relative irradiance transmission to depth, respectively. We applied our algorithm to irradiance measurements, obtained using bottom-trawl-mounted archival tags equipped with a photodiode collected during NOAA’s Alaska Fisheries Science Center annual summer bottom trawl surveys of the eastern Bering Sea continental shelf from 2004 to 2018. We validated our AOPs by quantitatively comparing surface-weighted K d from tags to the multi-sensor K d (490) product from the Ocean Colour Climate Change Initiative project (OC-CCI) and qualitatively evaluating whether tag K d was consistent with patterns of subsurface chlorophyll-a concentrations predicted by a coupled regional physical-biological model (Bering10K-BESTNPZ). We additionally examined patterns and trends in water clarity in the eastern Bering Sea. Key findings are: 1) water clarity decreased significantly from 2004 to 2018; 2) a recurrent, pycnocline-associated, maximum in K d occurred over much of the northwestern shelf, putatively due to a subsurface chlorophyll maximum; and 3) a turbid bottom layer (nepheloid layer) was present over a large portion of the eastern Bering Sea shelf. Our study demonstrates that bottom trawls can provide a useful platform for monitoring water clarity, especially when trawling is conducted as part of a systematic stock assessment survey.

Alaska