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USGS2010

Modeling downstream fining in sand-bed rivers. II: Application

In this paper the model presented in the companion paper, Wright and Parker (2005) is applied to a generic river reach typical of a large, sand-bed river flowing into the ocean in order to investigate the mechanisms controlling longitudinal profile development and downstream fining. Three mechanisms which drive downstream fining are studied: a delta prograding into standing water, sea-level rise, and tectonic subsidence. Various rates of sea-level rise (typical of the late Holocene) and tectonic subsidence are modeled in order to quantify their effects on the degree of profile concavity and downstream fining. Also, several other physical mechanisms which may affect fining are studied, including the relative importance of the suspended versus bed load, the effect of the loss of sediment overbank, and the influence of the delta bottom slope. Finally, sensitivity analysis is used to show that the grain-size distribution at the interface between the active layer and substrate has a significant effect on downstream fining.

Journal of Hydraulic Research↗

USGS2016

Federal collaboration in science for invasive mammal management in U.S. National Parks and Wildlife Refuges of the Pacific Islands

Some of the most isolated islands in the Pacific Ocean are home to US National Parks and Wildlife Refuges. These islands are known for flora and fauna that occur nowhere else, but also for invasive species and other factors which have resulted in the disproportionate extinction of native species. The control of invasive mammals is the single most expensive natural resource management activity essential for restoring ecological integrity to parks in the Hawaiian Islands, American Samoa, and the islands of Guam and Saipan. Science-based applications supporting management efforts have been shaped by longstanding collaborative federal research programs over the past four decades. Consequently, feral goats (Capra hircus) have been removed from >690 km2 in National Parks, and feral pigs (Sus scrofa) have been removed from >367 km2 of federal lands of Hawai‘i, bringing about the gradual recovery of forest ecosystems. The exclusion of other non-native ungulates and invasive mammals is now being undertaken with more sophisticated control techniques and fences. New fence designs are now capable of excluding feral cats (Felis catus) from large areas to protect endangered native waterfowl and nesting seabirds. Rodenticides which have been tested and registered for hand and aerial broadcast in Hawai‘i have been used to eradicate rats from small offshore islands to protect nesting seabirds and are now being applied to montane environments of larger islands to protect forest birds. Forward-looking infrared radar (FLIR) is also being applied to locate wild ungulates which were more recently introduced to some islands. All invasive mammals have been eradicated from some remote small islands, and it may soon be possible to manage areas on larger islands to be free of invasive mammals at least during seasonally important periods for native species.

Conference Paper↗

USGS2022

Phenomenological and mechanistic modeling of recreational angling behavior using creel data

Improved understanding of angling behavior in recreational fisheries can help managers account for partial controllability in systems in which angling effort is not directly regulated. Relevant aspects of angling behavior include fishing participation, site choice, and catch-and-release actions and can be considered at scales of both aggregate fishing effort and individual-decision-making. Using creel survey data collected across eight fishery seasons, we predicted aggregate angling effort (e.g., daily number of boating trips engaged in fishing) and characterized influences of individual trip-based site choice for recreational fisheries acting on fall-run Chinook salmon and coho salmon near the mouth of the Columbia River, United States of America. We applied an overdispersed Poisson likelihood-based generalized linear model with an autoregressive structure to aggregate boating effort and a multinomial logit model to trip-based site choice decisions among separate ocean and estuary fishing zones. Predictive models explained 71% and 79% of out-of-sample and in-sample variability in aggregate effort, respectively, and included the covariates weekend status, Chinook salmon catch rate, tidal range, and pre-season expectations of fish abundance. In addition to reinforcing the importance of Chinook salmon catch rate and tidal range, site choice model selection revealed influences of weather, fishery restrictions, expected fishery season lengths, and the individual-specific characteristics of boat length and guide status on decision-making. Model results provide predictive models for short-term fishery planning, highlight heterogeneity in individual decision-making, and illustrate the value of standardized creel data for evaluating angling behavior.

Oregon↗

USGS2018

Rethinking the use of seabed sediment temperature profiles to trace submarine groundwater flow

Submarine groundwater fluxes across the seafloor facilitate important hydrological and biogeochemical exchanges between oceans and seabed sediment, yet few studies have investigated spatially distributed groundwater fluxes in deep‐ocean environments such as continental slopes. Heat has been previously applied as a submarine groundwater tracer using an analytical solution to a heat flow equation assuming steady state conditions and homogeneous thermal conductivity. These assumptions are often violated in shallow seabeds due to ocean bottom temperature changes or sediment property variations. Here heat tracing analysis techniques recently developed for terrestrial settings are applied in concert to examine the influences of groundwater flow, ocean temperature changes, and seabed thermal conductivity variations on deep‐ocean sediment temperature profiles. Temperature observations from the sediment and bottom ocean water on the Scotian Slope off eastern Canada are used to demonstrate how simple thermal methods for tracing groundwater can be employed if more comprehensive techniques indicate that the simplifying assumptions are valid. The spatial distribution of the inferred groundwater fluxes on the slope suggests a downward groundwater flow system with recharge occurring over the upper‐middle slope and discharge on the lower slope. We speculate that the downward groundwater flow inferred on the Scotian Slope is due to density‐driven processes arising from underlying salt domes, in contrast with upward slope systems driven by geothermal convection. Improvements in the design of future submarine hydrogeological studies are proposed for thermal data collection and groundwater flow analysis, including new equations that quantify the minimum detectable flux magnitude for a given sensor accuracy and profile length.

Water Resources Research↗

USGS2020

How and why is the timing and occurrence of seasonal migrants in the Gulf of Maine changing due to climate?

Plants and animals undergo certain recurring life-cycle events, such as migrations between summer and winter habitats or the annual blooming of plants. Known as phenology, the timing of these events is very sensitive to changes in climate (and changes in one species’ phenology can impact entire food webs and ecosystems). Shifts in phenology have been described as a “fingerprint” of the temporal and spatial responses of wildlife to climate change impacts. Thus, phenology provides one of the strongest indicators of the adaptive capacity of organisms (or the ability of organisms to cope with future environmental conditions). In this study, researchers are exploring how the timing and occurrence of a number of highly migratory marine animals is changing due to a series of climatic and ecological shifts. First, using existing long-term historical data series, they will determine the direction and magnitude of how migration, abundance, or other phenological factors have changed for marine mammals, sea turtles, and fishes that migrate into the Gulf of Maine on a seasonal basis. Because marine animals are inherently difficult to detect, the team will apply dynamic occupancy models to evaluate seasonal migration patterns and habitat use across multiple habitats in the Gulf of Maine region. The project team will also synthesize regional information on a key, ecologically-important prey fish, sandlance, whose timing and abundance is a strong predictor of the occurrence and behavior of predator species targeted in this study as well as a range of other regional fish and wildlife of conservation and management concern. Results from this component of the project will identify coastal fish and wildlife species that are relatively more or less able to adapt and thus potentially vulnerable to climate change; determine the likely primary drivers of those changes; and identify data gaps and future monitoring needs. Ultimately, this information will be available and useful for regional coastal management and adaptation decisions that will allow managers to effectively plan for the future. In a second component of the project, researchers will focus specifically on changes in migration patterns of the endangered North Atlantic right whale. While shifts in the distribution and time of recurring life events are adaptive responses that may help species cope with climate impacts, they can also lead to changes in how species interact with humans. The North Atlantic right whale is one of the most endangered whale species on the planet. In the North Atlantic Ocean, ship strikes and entanglements with commercial fishing gear represent fatal threats to right whales. Recent reports suggest that North Atlantic right whale migration patterns have changed. Many researchers posit that shifts in migration are responsible for recent increases in the overlap between right whales and human activities, especially fishing. To help understand how changes in right whale movements and behaviors may overlap with ship traffic, and thus put the animals at risk of encountering vessels, we will combine right whale habitat models with ship traffic maps. The end result will be a set of maps identifying risk levels.

Gulf of Maine↗

USGS2013

The geologic records of dust in the Quaternary

Study of geologic records of dust composition, sources and deposition rates is important for understanding the role of dust in the overall planetary radiation balance, fertilization of organisms in the world’s oceans, nutrient additions to the terrestrial biosphere and soils, and for paleoclimatic reconstructions. Both glacial and non-glacial processes produce fine-grained particles that can be transported by the wind. Geologic records of dust flux occur in a number of depositional archives for sediments: (1) loess deposits; (2) lake sediments; (3) soils; (4) deep-ocean basins; and (5) ice sheets and smaller glaciers. These archives have several characteristics that make them highly suitable for understanding the dynamics of dust entrainment, transport, and deposition. First, they are often distributed over wide geographic areas, which permits reconstruction of spatial variation of dust flux. Second, a number of dating methods can be applied to sediment archives, which allows identification of specific periods of greater or lesser dust flux. Third, aeolian sediment particle size and composition can be determined so that dust source areas can be ascertained and dust transport pathways can be reconstructed. Over much of the Earth’s surface, dust deposition rates were greater during the last glacial period than during the present interglacial period. A dustier Earth during glacial periods is likely due to increased source areas, greater aridity, less vegetation, lower soil moisture, possibly stronger winds, a decreased intensity of the hydrologic cycle, and greater production of dust-sized particles from expanded ice sheets and glaciers.

Aeolian Research↗

USGS2010

Reconnaissance dating: a new radiocarbon method applied to assessing the temporal distribution of Southern Ocean deep-sea corals

We have developed a rapid 'reconnaissance' method of preparing graphite for 14 C/ 12 C analysis. Carbonate (~15 mg) is combusted using an elemental analyzer and the resulting CO 2 is converted to graphite using a sealed tube zinc reduction method. Over 85% ( n =45 replicates on twenty-one individual corals) of reconnaissance ages measured on corals ranging in age from 500 to 33,000 radiocarbon years (Ryr) are within two standard deviations of ages generated using standard hydrolysis methods on the same corals, and all reconnaissance ages are within 300 Ryr of the standard hydrolysis ages. Replicate measurements on three individual aragonitic corals yielded ages of 1076±35 Ryr (standard deviation; n =5), 10,739±47 Ryr ( n =8), and 40,146±3500 Ryr ( n =9). No systematic biases were found using different cleaning methods or variable sample sizes. Analysis of 13 C/ 12 C was made concurrently with the 14 C/ 12 C measurement to correct for natural fractionation and for fractionation during sample processing and analysis. This technique provides a new, rapid method for making accurate, percent-level 14 C/ 12 C analyses that may be used to establish the rates and chronology of earth system processes where survey-type modes of age estimation are desirable. For example, applications may include creation of sediment core-top maps, preliminary age models for sediment cores, and growth rate studies of marine organisms such as corals or mollusks. We applied the reconnaissance method to more than 100 solitary deep-sea corals collected in the Drake Passage in the Southern Ocean to investigate their temporal and spatial distribution. The corals used in this study are part of a larger sample set, and the subset that was dated was chosen based on species as opposed to preservation state, so as to exclude obvious temporal biases. Similar to studies in other regions, the distribution of deep-sea corals is not constant through time across the Drake Passage. Most of the corals from the Burdwood Bank (continental shelf of Argentina) have ages ranging between 0 and 2500 calendar years, whereas most of the corals from the Sars Seamount in the Drake Passage have ages between 10,000 and 12,500 calendar years. Such differences may be caused in part by sampling biases, but may also be caused by changes in larval transport, nutrient supply, or other environmental pressures.

Deep-Sea Research Part I: Oceanographic Research P↗

USGS2016

Using smooth sheets to describe groundfish habitat in Alaskan waters, with specific application to two flatfishes

In this analysis we demonstrate how preferred fish habitat can be predicted and mapped for juveniles of two Alaskan groundfish species – Pacific halibut ( Hippoglossus stenolepis ) and flathead sole ( Hippoglossoides elassodon ) – at five sites (Kiliuda Bay, Izhut Bay, Port Dick, Aialik Bay, and the Barren Islands) in the central Gulf of Alaska. The method involves using geographic information system (GIS) software to extract appropriate information from National Ocean Service (NOS) smooth sheets that are available from NGDC (the National Geophysical Data Center). These smooth sheets are highly detailed charts that include more soundings, substrates, shoreline and feature information than the more commonly-known navigational charts. By bringing the information from smooth sheets into a GIS, a variety of surfaces, such as depth, slope, rugosity and mean grain size were interpolated into raster surfaces. Other measurements such as site openness, shoreline length, proportion of bay that is near shore, areas of rocky reefs and kelp beds, water volumes, surface areas and vertical cross-sections were also made in order to quantify differences between the study sites. Proper GIS processing also allows linking the smooth sheets to other data sets, such as orthographic satellite photographs, topographic maps and precipitation estimates from which watersheds and runoff can be derived. This same methodology can be applied to larger areas, taking advantage of these free data sets to describe predicted groundfish essential fish habitat (EFH) in Alaskan waters.

Alaska↗

USGS1949

Fourth special report of the Hawaiian Volcano Observatory of the U.S. Geological Survey and the Hawaiian Volcano Research Association: Steam blast volcanic eruptions: A study of Mount Pelée in Martinique as type volcano

The investigation is concerned with the author's expedition to Martinique and St. Vincent in 1902 and comparison of the experience of investigators and sufferers with that of others in so-called "explosive" eruptions. The Hawaiian mechanism is reviewed with special reference to rifts, underground water, intrusion furnace, wedge rupture, and lowering of magma. These features of structure are applied to Martinique, St. Vincent, Kilauea, Tarawera, Sakurajima, Katmai, Taal and Tomboro as a series of steam blasts old and new. The comparison is found to be applicable and the analogy with Hawaii considered as fundamentally magmatic for gas and basaltic slag, brings out the contrast that lies in steam eruptions. For all volcanoes they are believed features of ground water and of collapse. Ground water stimulates lava eruptions. The Pelée disaster at St. Pierre May 8, 1902, followed by a dacite dome with spines, which renewed activity in 1929, is examined for paroxysms of downblast. These are distinguished sharply from the Carib migratory upblasts along valley fissures which are not uncommon elsewhere. The valleys are on rifts recognized as deep fumaroles. The Ghyben-Herzberg laws of ground water are applicable. Geyser rhythm was followed by Pelée, Soufriére of St. Vincent, and Kilauea in their sequence of paroxysms. Structure sections are drawn to scale, and the structural reactions of intrusion, rifts, boiler, gas effervescence, heat, and timing are thus outlined. The bearing of this machinery on volcanism in general, on world ignisepta and on reaction of magma is suggested. It is contended that steamblast is a climax of eruption in the water zone and should be sharply delimited from the rising and intrusion of fundamental earth magma, and from the high pressure water reactions of ocean bottoms. Rising magma is considered an age-long elevatory force along volcanic lines, modified by cyclical yielding. Compared with oceanic volcanism continental irruption in sediments is a separate science in experimental field geophysics. Every locality supramarine or submarine of warm ground and steep thermal gradient is a subject for volcanology, if pulsating ground water is critically, thermally and chemically measured. Authors are referred to herein by names and dates in parentheses, as listed in the appendices.

Martinique↗

USGS2023

Vulnerability to climate change of managed stocks in the California Current large marine ecosystem

Introduction: Understanding how abundance, productivity and distribution of individual species may respond to climate change is a critical first step towards anticipating alterations in marine ecosystem structure and function, as well as developing strategies to adapt to the full range of potential changes. Methods: This study applies the NOAA (National Oceanic and Atmospheric Administration) Fisheries Climate Vulnerability Assessment method to 64 federally-managed species in the California Current Large Marine Ecosystem to assess their vulnerability to climate change, where vulnerability is a function of a species’ exposure to environmental change and its biological sensitivity to a set of environmental conditions, which includes components of its resiliency and adaptive capacity to respond to these new conditions. Results: Overall, two-thirds of the species were judged to have Moderate or greater vulnerability to climate change, and only one species was anticipated to have a positive response. Species classified as Highly or Very Highly vulnerable share one or more characteristics including: 1) having complex life histories that utilize a wide range of freshwater and marine habitats; 2) having habitat specialization, particularly for areas that are likely to experience increased hypoxia; 3) having long lifespans and low population growth rates; and/or 4) being of high commercial value combined with impacts from non-climate stressors such as anthropogenic habitat degradation. Species with Low or Moderate vulnerability are either habitat generalists, occupy deep-water habitats or are highly mobile and likely to shift their ranges. Discussion: As climate-related changes intensify, this work provides key information for both scientists and managers as they address the long-term sustainability of fisheries in the region. This information can inform near-term advice for prioritizing species-level data collection and research on climate impacts, help managers to determine when and where a precautionary approach might be warranted, in harvest or other management decisions, and help identify habitats or life history stages that might be especially effective to protect or restore.

California, Oregon, Washington↗

USGS2025

Launching into societal benefits from the Surface Water and Ocean Topography (SWOT) mission

The 10th Surface Water and Ocean Topography (SWOT) Applications Meeting, held one year after the satellite's launch, highlighted significant milestones in mission progress and showcased the innovative work of SWOT Early Adopters (EA) using mission data products. Over 100 participants from diverse sectors convened to discuss operational applications leveraging SWOT's unprecedented water surface measurements. The meeting emphasized applied science efforts to enhance hydrology and oceanographic models. This summary highlights the breadth of operational and private-sector uses of SWOT data, emphasizing its potential to drive new innovations and deliver societal benefits, such as improved water resource management, flood prediction, and climate resilience.

Water Resources Research↗

USGS2007

Circulation and physical processes within the San Gabriel River Estuary during summer 2005

The Southern California Coastal Water Research Project (SCCWRP) is developing a hydrodynamic model of the SGR estuary, which is part of the comprehensive water-quality model of the SGR estuary and watershed investigated by SCCWRP and other local agencies. The hydrodynamic model will help understanding of 1) the exchange processes between the estuary and coastal ocean; 2) the circulation patterns in the estuary; 3) upstream natural runoff and the cooling discharge from PGS. Like all models, the SGR hydrodynamic model is only useful after it is fully calibrated and validated. In May 2005, SCCWRP requested the assistance of the U.S. geological Survey (USGS) Coastal and Marine Geology team (CMG) in collecting data on the hydrodynamic conditions in the estuary during the summer dry season. The summer was chosen for field data collection as this was assumed to be the season with the greatest potential for chronic degraded water quality due to low river flow and high thermal stratification within the estuary (due to both higher average air temperature and PGS output). Water quality can be degraded in winter as well, when higher river discharge events bring large volumes of water from the Los Angeles basin into the estuary. The objectives of this project were to 1) collect hydrodynamic data along the SGR estuary; 2) study exchange processes within the estuary through analysis of the hydrodynamic data; and 3) provide field data for model calibration and validation. As the data only exist for the summer season, the results herein only apply to summer conditions.

California↗

USGS2009

Microseismicity at the North Anatolian Fault in the Sea of Marmara offshore Istanbul, NW Turkey

The North Anatolian Fault Zone (NAFZ) below the Sea of Marmara forms a “seismic gap” where a major earthquake is expected to occur in the near future. This segment of the fault lies between the 1912 Ganos and 1999 İzmit ruptures and is the only NAFZ segment that has not ruptured since 1766. To monitor the microseismic activity at the main fault branch offshore of Istanbul below the Çınarcık Basin, a permanent seismic array (PIRES) was installed on the two outermost Prince Islands, Yassiada and Sivriada, at a few kilometers distance to the fault. In addition, a temporary network of ocean bottom seismometers was deployed throughout the Çınarcık Basin. Slowness vectors are determined combining waveform cross correlation and P wave polarization. We jointly invert azimuth and traveltime observations for hypocenter determination and apply a bootstrap resampling technique to quantify the location precision. We observe seismicity rates of 20 events per month for M < 2.5 along the basin. The spatial distribution of hypocenters suggests that the two major fault branches bounding the depocenter below the Çınarcık Basin merge to one single master fault below ∼17 km depth. On the basis of a cross-correlation technique we group closely spaced earthquakes and determine composite focal mechanisms implementing recordings of surrounding permanent land stations. Fault plane solutions have a predominant right-lateral strike-slip mechanism, indicating that normal faulting along this part of the NAFZ plays a minor role. Toward the west we observe increasing components of thrust faulting. This supports the model of NW trending, dextral strike-slip motion along the northern and main branch of the NAFZ below the eastern Sea of Marmara.

Istanbul↗

USGS2021

Aleutian Low variability for the last 7500 years and its relation to the Westerly Jet

The Aleutian Low (AL) is one of the major atmospheric systems that determines environmental conditions during winter in the North Pacific Ocean, with impacts that affect the climates of both Asia and North America from mid- to high latitudes. However, the multi-centennial and longer scale behavior of the AL during the Holocene is not fully understood. In this study, AL variability since 7.5 ka was examined by applying the principal component analysis technique to published δ 18 O data derived from sedimentary calcite, peat, ice, and speleothem from western North America. The extracted Principal Component 1 (PC1) represents a dramatic change from the mid- to late Holocene, and appears to reflect long-term intensified AL related to interactions between orbitally-driven southward shift of the Westerly Jet (WJ) over East Asia and the northwestern Pacific, and intensification of the El Niño–Southern Oscillation. In contrast, PC2 is characterized by multi-centennial to millennial-scale oscillations, with a spatial loading pattern that suggests PC2 reflects AL intensity and position shifts. These oscillations are contemporaneous with both WJ latitude and/or the meandering path shifts over East Asia and solar activity change, suggesting that a decrease/increase in solar irradiance is related to AL variability via interactions with the WJ.

Quaternary Research↗

USGS2010

Stochastic model for the long-term transport of stored sediment in a river channel

We develop a stochastic model for the transport of stored sediment down a river channel. The model is based on probabilities of transition of particles among four different sediment storage reservoirs, called active (often mobilized), semiactive, inactive, and stable (hardly ever mobilized). The probabilities are derived from computed sediment residence times. Two aspects of sediment storage are investigated: flushing times of sediment out of a storage reservoir and changes in the quantity of sediment stored in different reservoirs due to seasonal sediment transport into, and out of, a reach. We apply the model to Redwood Creek, a gravel bed river in northern California. Although the Redwood Creek data set is incomplete, the application serves as an example of the sorts of analyses that can be done with the method. The application also provides insights into the sediment storage process. Sediment flushing times are highly dependent on the degree of interaction of the stable reservoir with the more mobile sediment reservoirs. The most infrequent and highest intensity storm events, which mobilize the stable reservoir, are responsible for the long-term shifts in sediment storage. Turnover times of channel sediment in all but the stable reservoir are on the order of 750 years, suggesting this is all the time needed for thorough interchange between these sediment compartments and cycling of most sediment particles from the initial reservoir to the ocean. Finally, the Markov model has adequately characterized sediment storage changes in Redwood Creek for 1947–1982, especially for the active reservoir. The model replicates field observation of the passage of a slug of sediment through the active reservoir of the middle reach of Redwood Creek in the 18 years following a major storm in 1964 that introduced large quantities of landslide debris to the channel.

California↗

USGS2022

Contaminants of emerging concern in the Great Lakes: Science to inform management practices for protecting the health and integrity of wildlife populations from adverse effects: GLRI action plan I, focus area 1, goal 5

Executive Summary: Under Action Plan I (2010-2014) of the Great Lakes Restoration Initiative (GLRI), Federal and Academic partners began an investigation of the presence and distribution of contaminants of emerging concern (CECs) in the Great Lakes and potential impacts on fish and wildlife. The term CECs is applied to a broad range of chemicals that are currently in use but for which we currently lack good understanding of whether fish, wildlife, or humans are being exposed and/or whether negative health or environmental effects are expected if exposure occurs. Pharmaceuticals, personal care products, flame retardants, many current use pesticides, and poly- and perfluorinated chemicals are some well-known groups of CECs, but there is no definitive or comprehensive list that can be used to support the management of CECs to reduce impacts on the Great Lakes ecosystem. Four overarching goals were identified for this collaborative investigation: 1. Evaluate the sources, occurrence, and distribution of CECs across the Great Lakes Basin. 2. Examine associations between the distribution of CECs and land-use patterns. 3. Review both scientific literature and field-generated data to determine the potential for CECs to cause adverse effects on Great Lakes fish and wildlife populations. 4. Develop efficient strategies to survey and/or monitor for threats that CECs may pose in order to take effective management actions before those threats evolve into large scale impacts on Great Lakes ecosystems or the services they provide. Achievement of these goals ensures progress towards Focus Area 1: Toxic Substances and Areas of Concern from GLRI Action Plan I, Goal 5: “ The health and integrity of wildlife populations and habitat are protected from adverse chemical and biological effects associated with the presence of toxic substances in the Great Lakes Basin ”. This large-scale research effort was comprised of individual and collaborative projects from multiple federal agencies and academic institutions, involving over 85 investigators, and overseen by the U.S. Environmental Protection Agency (EPA) Region 5, Great Lakes National Program Office. Partners include the United States Geological Survey, the National Oceanic and Atmospheric Administration, U.S. Fish and Wildlife Service, Saint Cloud State University, the U.S. EPA Office of Research and Development, and the U.S. Army Corps of Engineers. Key findings: 1. Contaminants of emerging concern were found throughout the monitored Great Lakes tributaries, but types and concentrations vary in association with regional land use. CECs were detected in nearly all samples collected. The type and concentration of the specific contaminants detected varied considerably among field sites and in association with land use type, such as urban, agricultural, wetland, 2 or forest. Contaminants were detected in the water column, sediment, and tissues of all species surveyed in the current work (mussels, aquatic insects, fish, and insect-eating birds). 2. There were over 20 contaminants for which CEC concentrations approached or exceeded those reported to cause toxicity in laboratory experiments. This was based on detection in water, sediments and or biota at one or more field sites. These contaminants represent compounds that warrant further investigation and monitoring with respect to potential impacts in certain areas of the Great Lakes basin. Based on the present investigation, compounds of greatest concern include: polycyclic aromatic hydrocarbons, associated with oil-based products and combustion of organic matter; atrazine, an herbicide; dichlorvos, an insecticide; and ibuprofen and venlafaxine, both pharmaceuticals. 3. Results suggest that mixtures of CECs presently found in most Great Lakes tributary locations surveyed may elicit subtle biological effects, but likely are not, alone, causing obvious detriment to current communities of fish and wildlife. CECs detected in the Great Lakes were associated with subtle biological effects like changes in gene expression, altered circulating glucose, etc. in both wild-caught and laboratory-reared organisms. These effects were generally not indicative of reproductive failure or mortality. However, the effects may have more serious implications when combined with other sources of stress like habitat degradation, changing climate conditions, and competition with invasive species. Due to limited historical data, it is unknown whether severe CEC-related impacts have already affected aquatic communities in waterbodies that have received long-term inputs of these contaminants. Likewise, under Action Plan I, biological effects were not necessarily evaluated at the sites where CEC concentrations exceeding laboratory toxicity thresholds were detected. As a result, strategic, ongoing surveillance and monitoring of CECs is warranted. This collaborative investigation resulted in new tools, approaches, and data that can be used to inform and support the management of CECs to reduce their impacts on Great Lakes natural resources. The following products of this research effort are available through https://communities.geoplatform.gov/glri/ or by contacting the investigators (see technical chapters found in Appendices A-F): 1. Database of CEC occurrence and concentrations in US tributary streams. The database includes CEC detections in water, sediment, and fish and wildlife tissues, and represents the most comprehensive survey of CECs in the Great Lakes Region. 2. Synopses of results and key findings. Integrated summaries of results, conclusions, and management implications of the CEC research are available through reports, topical fact sheets, and presentations. 3. Technical publications: This collaborative research effort has resulted in over 50 peer-reviewed publications, agency reports, and data releases that can be of use to resource managers, the scientific community, and members of the public. 4. Innovative tools. Innovative monitoring devices, sampling equipment, conceptual frameworks, and software applications were developed over the course of this 3 research. These tools are transferable to stakeholders via internet accessibility or via specifications, instructions, and demonstration detailed in technical publications. Hypotheses to guide CECs research under Action Plan II. Findings from 2010-2014 were used to guide further research in 2015-2018 for basin-wide surveillance of CECs and for sites warranting further study of potential biological impacts of CECs. Additional surveillance included both evaluation of additional classes of contaminants and expanded lists for chemical classes shown to be of greatest concern. Mixtures of some of the most frequently detected contaminants were also tested in laboratory studies to understand whether long term exposures to multiple contaminants may result in effects not evident from uncontrolled, short-term field experiments.

Great Lakes↗

USGS2012

Effect of wave-current interaction on wind-driven circulation in narrow, shallow embayments

The effect of wind waves on the steady wind-driven circulation in a narrow, shallow bay is investigated with a two-dimensional ( y , z ) circulation model and the Grant and Madsen [1979] bottom-boundary layer model, which includes wave-current interaction. A constant wind stress is applied in the along-channel x direction to a channel with a constant cross-sectional profile h ( y ). The wind-induced flushing of shallow bays is shown to be sensitive to both the shape of the cross section and the effects of surface waves. The flushing increases with increasing , where h ′ is the standard deviation of cross-channel depth and is the mean depth. This is consistent with the findings of Hearn et al. [1987]. The flushing decreases, however, with the inclusion of surface wave effects which act to increase the bottom drag felt by the currents. Increasing effective bottom friction reduces the strength of the circulation, while the along-bay surface slope, bottom stress and the structure of current profiles remain nearly unchanged. An implication of the circulation dependence on wave-current interaction is that low-frequency oscillatory winds may drive a mean circulation when the wave field changes with wind direction. x

Journal of Geophysical Research C: Oceans↗

USGS2014

Formation of fine sediment deposit from a flash flood river in the Mediterranean Sea

We identify the mechanisms controlling fine deposits on the inner-shelf in front of the Besòs River, in the northwestern Mediterranean Sea. This river is characterized by a flash flood regime discharging large amounts of water (more than 20 times the mean water discharge) and sediment in very short periods lasting from hours to few days. Numerical model output was compared with bottom sediment observations and used to characterize the multiple spatial and temporal scales involved in offshore sediment deposit formation. A high-resolution (50 m grid size) coupled hydrodynamic-wave-sediment transport model was applied to the initial stages of the sediment dispersal after a storm-related flood event. After the flood, sediment accumulation was predominantly confined to an area near the coastline as a result of preferential deposition during the final stage of the storm. Subsequent reworking occurred due to wave-induced bottom shear stress that resuspended fine materials, with seaward flow exporting them toward the midshelf. Wave characteristics, sediment availability, and shelf circulation determined the transport after the reworking and the final sediment deposition location. One year simulations of the regional area revealed a prevalent southwestward average flow with increased intensity downstream. The circulation pattern was consistent with the observed fine deposit depocenter being shifted southward from the river mouth. At the southern edge, bathymetry controlled the fine deposition by inducing near-bottom flow convergence enhancing bottom shear stress. According to the short-term and long-term analyses, a seasonal pattern in the fine deposit formation is expected.

Journal of Geophysical Research: Oceans↗