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USGS1981

Assessment of impacts of proposed coal-resource and related economic development on water resources, Yampa River basin, Colorado and Wyoming: A summary

Expanded mining and use of coal resources in the Rocky Mountain region of the western United States will have substantial impacts on water resources, environmental amenities, and social and economic conditions. The U.S. Geological Survey has completed a 3-year assessment of the Yampa River basin, Colorado and Wyoming, where increased coal-resource development has begun to affect the environment and quality of life. Economic projections of the overall effects of coal-resource development were used to estimate water use and the types and amounts of waste residuals that need to be assimilated into the environment. Based in part upon these projections, several physical-based models and other semiquantitative assessment methods were used to determine possible effects upon the basin's water resources. Depending on the magnitude of mining and use of coal resources in the basin, an estimated 0.7 to 2.7 million tons (0.6 to 2.4 million metric tons) of waste residuals may be discharged annually into the environment by coal-resource development and associated economic activities. If the assumed development of coal resources in the basin occurs, annual consumptive use of water, which was approximately 142,000 acre-feet (175 million cubic meters) during 1975, may almost double by 1990. In a related analysis of alternative cooling systems for coal-conversion facilities, four to five times as much water may be used consumptively in a wet-tower, cooling-pond recycling system as in once-through cooling. An equivalent amount of coal transported by slurry pipeline would require about one-third the water used consumptively by once-through cooling for in-basin conversion. Current conditions and a variety of possible changes in the water resources of the basin resulting from coal-resource development were assessed. Basin population may increase by as much as threefold between 1975 and 1990. Volumes of wastes requiring treatment will increase accordingly. Potential problems associated with ammonia-nitrogen concentrations in the Yampa River downstream from Steamboat Springs were evaluated using a waste-load assimilative-capacity model. Changes in sediment loads carried by streams due to increased coal mining and construction of roads and buildings may be apparent only locally; projected increases in sediment loads relative to historic loads from the basin are estimated to be 2 to 7 percent. Solid-waste residuals generated by coal-conversion processes and disposed of into old mine pits may cause widely dispersed ground-water contamination, based on simulation-modeling results. Projected increases in year-round water use will probably result in the construction of several proposed reservoirs. Current seasonal patterns of streamflow and of dissolvedsolids concentrations in streamflow will be altered appreciably by these reservoirs. Decreases in time-weighted mean-annual dissolved-solids concentrations of as much as 34 percent are anticipated, based upon model simulations of several configurations of proposed reservoirs. Detailed statistical analyses of water-quality conditions in the Yampa River basin were made. Regionalized maximum waterquality concentrations were estimated for possible comparison with future conditions. Using Landsat imagery and aerial photographs, potential remote-sensing applications were evaluated to monitor land-use changes and to assess both snow cover and turbidity levels in streams. The technical information provided by the several studies of the Yampa River basin assessment should be useful to regional planners and resource managers in evaluating the possible impacts of development on the basin's water resources.

Colorado, Wyoming↗

USGS1995

Water budgets, water quality, and analysis of nutrient loading of the Winter Park Chain of Lakes, central Florida, 1989-92, with a section on littoral vegetation

The Winter Park chain of lakes (Lakes Maitland, Virginia, Osceola, and Mizell) has a combined area of about 900 acres, an immediate drainage area of about 3,100 acres, and mean depths ranging from 11 to 15 feet. The lakes are an important recreational resource for the surrounding communities, but there is concern about the possible effects of stormwater runoff and seepage of nutrient-enriched ground water on the quality of water in the lakes. The lakes receive water from several sources: rainfall on lake surfaces, inflow from other surface-water bodies, stormflow that enters the lakes through storm drains or by direct runoff from land adjacent to the lakes, and ground-water seepage. Water leaves the lakes by evaporation, surface outflow, and ground-water outflow. Of the three, only surface outflow can be measured directly. Rainfall, surface inflow and outflow, and lake-stage data were collected from October 1, 1989, to September 30, 1992. Stormflow, evaporation and ground-water inflow and outflow were estimated for the 3 years of the study. Ground-water outflow was calculated by evaluating the rate of lake-stage decline during dry periods. Estimated ground-water outflow was compared to downward leakage rates estimated by ground-water flow models. Lateral ground-water inflow from surficial sediments was calculated as the residual of the flow budget. Flow budgets were calculated for the 3 years of the study. In water year 1992 (a year with about average rainfall), inflow consisted of rainfall, 48 inches; stormflow, 15 inches; surface inflow, 67 inches; and ground water, 40 inches. The calculated outflows were evaporation, 47 inches; surface outflow, 90 inches; and ground water, 33 inches. Water-quality data also were used to calculate nutrient budgets for the lakes. Bimonthly water samples were collected from the lakes and at surface inflow and outflow sites, and were analyzed for physical characteristics, dissolved oxygen, pH, specific conductance, major ions, the nutrients nitrogen and phosphorus, and chlorophyll (collected at lake sites only). Specific conductance ranged from about 190 to 230 microsiemens per centimeter at 25 degrees Celsius in Lakes Maitland, Virginia and Osceola and from about 226 to 260 microsiemens per centimeter at 25 degrees Celsius in Lake Mizell. The median concentrations of total ammonia-plus-organic nitrogen in all the lakes ranged from 0.79 to 0.99 milligrams per liter. Median total phosphorus concentrations ranged from less than 0.02 to 0.20 milligrams per liter. Stormwater samples were collected for 17 storms at one storm-drain site and 16 storms at another storm-drain site on Lake Osceola. Median total nitrogen concentrations at the sites were 2.23 and 3.06 milligrams per liter and median total phosphorus concentrations were 0.34 and 0.40 milligrams per liter. The water quality in the Winter Park lakes generally is fair to good, based on a trophic-state index used by the Florida Department of Environmental Protection for assessing the tropic state of Florida lakes. This index was determined from median total nitrogen, total phosphorus, and chlorophyll-a concentrations, and median Secchi-disk transparency for all lakes for the period September 1989 to June 1992. Based on a one-time sampling of 20 sites around the lakes, surficial ground-water quality is highly variable. Nutrient concentrations were highly variable and could not be correlated to the proximity of septic tanks. Fertilizer probably is the primary source of nutrients in the surficial ground water. Nutrient budgets were calculated for the lakes for the 3 years of the study. The most variable source of nutrient loading to the lakes is stormwater. Nutrient-loading modeling indicates that reduction of nutrients in stormflow probably would improve lake-water quality. However, even with complete removal of nitrogen and phosphorus from stormwater, the lakes might still be mesotrophic with respect to both nutrients during periods of below average rainfall because of the input from the other sources of inflow to the lakes. Littoral vegetation in the lakes was surveyed in March 1992. The length of shoreline containing vegetation was 44 percent in Lake Maitland, 62 percent in Lake Virginia, 46 percent in Lake Osceola, and 76 percent in Lake Mizell. The types of vegetation present generally were similar for all four lakes.

Florida↗

USGS2024

Great Lakes mallard population dynamics

Breeding mallard ( Anas platyrhynchos ) populations in the Great Lakes region (Michigan, Minnesota, Wisconsin, USA) declined by >40% between 2000–2022 based on abundance data collected during spring aerial surveys. Mallards are an important waterfowl species in this region, where an estimated 60–80% of the mallard harvest is composed of locally banded birds. Extensive population monitoring datasets are available for mallards, presenting an opportunity to address complex questions such as estimating productivity at large spatial and temporal scales, identifying the effects of harvest on mallard demography, quantifying mechanisms for harvest compensation, and integrating multiple datasets to quantify the demographic drivers of population change. Our objective was to simultaneously examine factors affecting demographic parameters and their relative contribution to Great Lakes mallard population dynamics. We used 32 years of banding, band recovery, and aerial survey data collected for mallards from Michigan and Wisconsin to develop an integrated population model (IPM). We used age ratios at banding to estimate productivity, band recoveries from hunter-harvested birds to estimate annual survival and cause-specific mortality (i.e., harvest or non-hunting), and modeled abundance using aerial survey and demographic parameter estimates from 1991–2022. The IPM results indicated the decline in Great Lakes mallard abundance was caused by increased non-hunting mortality and a decline in productivity. Productivity varied spatially but temporally declined with the loss of Conservation Reserve Program area. Moreover, our productivity assessment provided evidence of density dependence in reproduction. Non-hunting mortality was 3.5–6.7 times and 1.3–4.2 times greater than harvest mortality for adult and juvenile female mallards, respectively, indicating environmental factors during spring and summer, not harvest, most greatly influenced annual mortality for female mallards. Our IPM reduced uncertainty in the factors affecting Great Lakes mallard population dynamics and indicated management actions that address non-hunting mortality and productivity would be most effective in increasing Great Lakes mallard abundance.

Michigan, Wisconsin↗

USGS2020

Assessment of multi-stressors on compositional turnover of diatom, invertebrate and fish assemblages along an urban gradient in Pacific Northwest streams (USA)

This study is part of the regional stream-quality assessment (RSQA) conducted by the U.S. Geological Survey (USGS) National Water Quality Assessment (NAWQA) project. The purpose of this study is to examine small streams along land-use and stressor gradients at the regional scale and to evaluate the relative importance of instream stressors on diatom, macroinvertebrate, and fish assemblages. In 2015, the RSQA project assessed stream quality in 82 wadeable streams that were selected along an urban land-use gradient in the Pacific Northwest Region (PNW) of the United States. This study evaluates the effects of four major categories of measured instream stressors – flow (i.e. alteration), water quality, habitat, and contaminants (in water and sediment) – on stream biota. We used gradient forest (GF) models to evaluate taxon specific responses to the various stressors for the three biotic assemblages. Results for diatom, invertebrate and fish assemblages showed that several environmental variables including substrate size, dissolved oxygen, and two or more different contaminants were selected in each of the GF models. In general, all three assemblages were negatively associated with any contaminant measures above zero, except the more tolerant taxa in each assemblage, which responded positively to contaminants. Total nitrogen (TN) and total phosphorus (TP) were important in both the diatom and invertebrate GF models but not in the fish models, which were related to temperature and stream flow. TP and TN were the top two variables for diatom GF models and various taxa responded at a range of nutrient concentrations; however, some taxa responded at low concentrations, for example around 0.02 for TP and 0.5 mg/L for TN. In general, the three biotic assemblages responded to multiple stressors following general patterns of known sensitive versus tolerant taxa for each of the biotic groups studied, yet the GF models allow us to explore taxon specific responses. For example, most of the sensitive Ephemeroptera, Plecoptera, Trichoptera invertebrate taxa (EPT) responded negatively when any contaminant increased above zero; yet some taxa such as the tolerant Trichoptera Cheumatopsyche responded positively to contaminants and many of the other stressors. The findings of this study demonstrate the value of using multiple assemblages to monitoring stressor gradients associated with urban stream systems and the importance of evaluating the responses of individual taxa to stressors.

Washington, Oregon↗

USGS2017

Putting flow-ecology relationships into practice: A decision-support system to assess fish community response to water-management scenarios

This paper presents a conceptual framework to operationalize flow–ecology relationships into decision-support systems of practical use to water-resource managers, who are commonly tasked with balancing multiple competing socioeconomic and environmental priorities. We illustrate this framework with a case study, whereby fish community responses to various water-management scenarios were predicted in a partially regulated river system at a local watershed scale. This case study simulates management scenarios based on interactive effects of dam operation protocols, withdrawals for municipal water supply, effluent discharges from wastewater treatment, and inter-basin water transfers. Modeled streamflow was integrated with flow–ecology relationships relating hydrologic departure from reference conditions to fish species richness, stratified by trophic, reproductive, and habitat characteristics. Adding a hypothetical new water-withdrawal site was predicted to increase the frequency of low-flow conditions with adverse effects for several fish groups. Imposition of new reservoir release requirements was predicted to enhance flow and fish species richness immediately downstream of the reservoir, but these effects were dissipated further downstream. The framework presented here can be used to translate flow–ecology relationships into evidence-based management by developing decision-support systems for conservation of riverine biodiversity while optimizing water availability for human use.

Water↗

USGS2004

Global land ice measurements from space (GLIMS): remote sensing and GIS investigations of the Earth's cryosphere

Concerns over greenhouse‐gas forcing and global temperatures have initiated research into understanding climate forcing and associated Earth‐system responses. A significant component is the Earth's cryosphere, as glacier‐related, feedback mechanisms govern atmospheric, hydrospheric and lithospheric response. Predicting the human and natural dimensions of climate‐induced environmental change requires global, regional and local information about ice‐mass distribution, volumes, and fluctuations. The Global Land‐Ice Measurements from Space (GLIMS) project is specifically designed to produce and augment baseline information to facilitate glacier‐change studies. This requires addressing numerous issues, including the generation of topographic information, anisotropic‐reflectance correction of satellite imagery, data fusion and spatial analysis, and GIS‐based modeling. Field and satellite investigations indicate that many small glaciers and glaciers in temperate regions are downwasting and retreating, although detailed mapping and assessment are still required to ascertain regional and global patterns of ice‐mass variations. Such remote sensing/GIS studies, coupled with field investigations, are vital for producing baseline information on glacier changes, and improving our understanding of the complex linkages between atmospheric, lithospheric, and glaciological processes.

Geocarto International↗

USGS2017

Demographic modelling reveals a history of divergence with gene flow for a glacially tied stonefly in a changing post-Pleistocene landscape

Aim Climate warming is causing extensive loss of glaciers in mountainous regions, yet our understanding of how glacial recession influences evolutionary processes and genetic diversity is limited. Linking genetic structure with the influences shaping it can improve understanding of how species respond to environmental change. Here, we used genome-scale data and demographic modelling to resolve the evolutionary history of Lednia tumana , a rare, aquatic insect endemic to alpine streams. We also employed a range of widely used data filtering approaches to quantify how they influenced population structure results. Location Alpine streams in the Rocky Mountains of Glacier National Park, Montana, USA. Taxon Lednia tumana , a stonefly (Order Plecoptera) in the family Nemouridae. Methods We generated single nucleotide polymorphism data through restriction-site associated DNA sequencing to assess contemporary patterns of genetic structure for 11 L. tumana populations. Using identified clusters, we assessed demographic history through model selection and parameter estimation in a coalescent framework. During population structure analyses, we filtered our data to assess the influence of singletons, missing data and total number of markers on results. Results Contemporary patterns of population structure indicate that L. tumana exhibits a pattern of isolation-by-distance among populations within three genetic clusters that align with geography. Mean pairwise genetic differentiation ( F ST ) among populations was 0.033. Coalescent-based demographic modelling supported divergence with gene flow among genetic clusters since the end of the Pleistocene (~13-17 kya), likely reflecting the south-to-north recession of ice sheets that accumulated during the Wisconsin glaciation. Main conclusions We identified a link between glacial retreat, evolutionary history and patterns of genetic diversity for a range-restricted stonefly imperiled by climate change. This finding included a history of divergence with gene flow, an unexpected conclusion for a mountaintop species. Beyond L. tumana , this study demonstrates the complexity of assessing genetic structure for weakly differentiated species, shows the degree to which rare alleles and missing data may influence results, and highlights the usefulness of genome-scale data to extend population genetic inquiry in non-model species.

Montana↗

USGS2012

An economic value of remote-sensing information—Application to agricultural production and maintaining groundwater quality

Does remote-sensing information provide economic benefits to society, and can a value be assigned to those benefits? Can resource management and policy decisions be better informed by coupling past and present Earth observations with groundwater nitrate measurements? Using an integrated assessment approach, the U.S. Geological Survey (USGS) applied an established conceptual framework to answer these questions, as well as to estimate the value of information (VOI) for remote-sensing imagery. The approach uses moderate-resolution land-imagery (MRLI) data from the Landsat and Advanced Wide Field Sensor satellites that has been classified by the National Agricultural Statistics Service into the Cropland Data Layer (CDL). Within the constraint of the U.S. Environmental Protection Agency's public health threshold for potable groundwater resources, the USGS modeled the relation between a population of the CDL's land uses and dynamic nitrate (NO3-) contamination of aquifers in a case study region in northeastern Iowa. Employing various multiscaled, multitemporal geospatial datasets with MRLI to maximize the value of agricultural production, the approach develops and uses multiple environmental science models to address dynamic nitrogen loading and transport at specified distances from specific sites (wells) and at landscape scales (for example, across 35 counties and two aquifers). In addition to the ecosystem service of potable groundwater, this effort focuses on the use of MRLI for the management of the major land uses in the study region-the production of corn and soybeans, which can impact groundwater quality. Derived methods and results include (1) economic and dynamic nitrate-pollution models, (2) probabilities of the survival of groundwater, and (3) a VOI for remote sensing. For the northeastern Iowa study region, the marginal benefit of the MRLI VOI (in 2010 dollars) is $858 million ±$197 million annualized, which corresponds to a net present value of $38.1 billion ±$8.8 billion for that flow of benefits in perpetuity. Given that these economic estimates are derived from one case study in a part of only one State, the estimates provide a lower estimate related to the potential value of the Landsat Data Continuity Mission.

Professional Paper↗

USGS1996

A spatial decision support system for coastal management: A research project at the National Wetlands Research Center of the U.S. Geological Survey

Environmental resource managers and scientists are being challenged in developing strategies to manage complex coastal systems. From an ecological perspective, there are myriad dynamic, interrelated natural and human-induced processes that affect the health and stability of coastal systems. However, the problems associated with managing coastal resources usually transcend purely ecological factors when one considers societal needs and expectations from these resources. For example, at least nine Federal, State, and local government agencies, often with widely varying responsibilities or interests, are charged with managing environmental resources and/or regulating human activities within Louisiana's coastal systems; that number may be higher in other coastal areas of the United States. In many coastal systems, a declining resource base and environmental quality combined with an expanding human population exert increased demands on those systems. This results in a number of conflicting resource management and environmental impact assessment issues. The issues include determining the most cost-effective strategies for restoring degraded natural systems, local and regional planning for future urban and commercial development in or near sensitive coastal habitats, predicting impacts from acute and chronic pollutant discharges (oil spills, fecal coliform contamination) as well as from natural hazard damages to coastal systems, and optimal partitioning of coastal resources among competing user groups (e.g., commercial and recreational fishermen). Solving such complex environmental resource management problems often involves a multidisciplinary approach, requires computerized analytical modeling abilities to manipulate large quantities of spatial-temporal data according to a defined set of objectives or constraints, and needs a mechanism to provide quick responses for dynamic resource and environmental issues. For this, a GIS-based multifunctional Spatial Decision Support System (SDSS) is being developed at the National Wetlands Research Center of the U.S. Geological Survey (formerly the Southern Science Center of the US. Fish and Wildlife Service/National Biological Service).

Louisiana↗

USGS2015

Modelling regional land change scenarios to assess land abandonment and reforestation dynamics in the Pyrenees (France)

Over the last decades and centuries, European mountain landscapes have experienced substantial transformations. Natural and anthropogenic LULC changes (land use and land cover changes), especially agro-pastoral activities, have directly influenced the spatial organization and composition of European mountain landscapes. For the past sixty years, natural reforestation has been occurring due to a decline in both agricultural production activities and rural population. Stakeholders, to better anticipate future changes, need spatially and temporally explicit models to identify areas at risk of land change and possible abandonment. This paper presents an integrated approach combining forecasting scenarios and a LULC changes simulation model to assess where LULC changes may occur in the Pyrenees Mountains, based on historical LULC trends and a range of future socio-economic drivers. The proposed methodology considers local specificities of the Pyrenean valleys, sub-regional climate and topographical properties, and regional economic policies. Results indicate that some regions are projected to face strong abandonment, regardless of the scenario conditions. Overall, high rates of change are associated with administrative regions where land productivity is highly dependent on socio-economic drivers and climatic and environmental conditions limit intensive (agricultural and/or pastoral) production and profitability. The combination of the results for the four scenarios allows assessments of where encroachment (e.g. colonization by shrublands) and reforestation are the most probable. This assessment intends to provide insight into the potential future development of the Pyrenees to help identify areas that are the most sensitive to change and to guide decision makers to help their management decisions.

Journal of Mountain Science↗

USGS2019

The evolving threat of rapid Ohia death (ROD) to Hawaii’s native ecosystems and rare plant species

Hawai‘i’s most widespread native tree, ‘ōhi‘a lehua ( Metrosideros polymorpha ), has been dying across large areas of Hawai‘i Island mainly due to two fungal pathogens ( Ceratocystis lukuohia and Ceratocystis huliohia ) that cause a disease collectively known as Rapid ‘Ōhi‘a Death (ROD). Here we examine patterns of positive detections of C. lukuohia as it has been linked to the larger mortality events across Hawai‘i Island. Our analysis compares the environmental range of C. lukuohia and its spread over time through the known climatic range and distribution of ‘ōhi‘a. Analyses show this fungal pathogen generally encompassed the core, but not the extremes of the climatic range of ‘ōhi‘a. We further modeled the potential distribution of C. lukuohia across the Hawaiian Archipelago to estimate the risk of ROD to other islands. Given the potential for C. lukuohia to alter the structure of ‘ōhi‘a dominated forests, we used our projected potential distribution of C. lukuohia to assess the risk of ROD to threatened and endangered plant species across Hawai‘i. Many native plants are likely vulnerable to these types of large ‘ōhi‘a mortality events: of 234 endangered native plant species considered, 147 (62.8%) have more than half of their range within current and expanding C. lukuohia suitable areas. We also found evidence that protecting habitat by fencing out introduced feral ungulates reduces the prevalence of the disease likely by reducing physical damage caused by these animals to ‘ōhi‘a trees, a precondition for Ceratocystis infection. Given the ongoing spread of C. lukuohia , we developed a dynamic web portal to host our results online, where models and analyses are updated with new lab-confirmed detections to provide managers with a useful tool to help monitor and assess the risk of C. lukuohia as it continues to spread.

Hawaii↗

USGS2015

Evaluating abundance and trends in a Hawaiian avian community using state-space analysis

Estimating population abundances and patterns of change over time are important in both ecology and conservation. Trend assessment typically entails fitting a regression to a time series of abundances to estimate population trajectory. However, changes in abundance estimates from year-to-year across time are due to both true variation in population size (process variation) and variation due to imperfect sampling and model fit. State-space models are a relatively new method that can be used to partition the error components and quantify trends based only on process variation. We compare a state-space modelling approach with a more traditional linear regression approach to assess trends in uncorrected raw counts and detection-corrected abundance estimates of forest birds at Hakalau Forest National Wildlife Refuge, Hawai‘i. Most species demonstrated similar trends using either method. In general, evidence for trends using state-space models was less strong than for linear regression, as measured by estimates of precision. However, while the state-space models may sacrifice precision, the expectation is that these estimates provide a better representation of the real world biological processes of interest because they are partitioning process variation (environmental and demographic variation) and observation variation (sampling and model variation). The state-space approach also provides annual estimates of abundance which can be used by managers to set conservation strategies, and can be linked to factors that vary by year, such as climate, to better understand processes that drive population trends.

Hawai'i↗

USGS2009

Web-based decision support and visualization tools for water quality management in the Chesapeake Bay watershed

Federal, State, and local water quality managers charged with restoring the Chesapeake Bay ecosystem require tools to maximize the impact of their limited resources. To address this need, the U.S. Geological Survey (USGS) and the Environmental Protection Agency's Chesapeake Bay Program (CBP) are developing a suite of Web-based tools called the Chesapeake Online Assessment Support Toolkit (COAST). The goal of COAST is to help CBP partners identify geographic areas where restoration activities would have the greatest effect, select the appropriate management strategies, and improve coordination and prioritization among partners. As part of the COAST suite of tools focused on environmental restoration, a water quality management visualization component called the Nutrient Yields Mapper (NYM) tool is being developed by USGS. The NYM tool is a web application that uses watershed yield estimates from USGS SPAtially Referenced Regressions On Watershed (SPARROW) attributes model (Schwarz et al., 2006) [6] to allow water quality managers to identify important sources of nitrogen and phosphorous within the Chesapeake Bay watershed. The NYM tool utilizes new open source technologies that have become popular in geospatial web development, including components such as OpenLayers and GeoServer. This paper presents examples of water quality data analysis based on nutrient type, source, yield, and area of interest using the NYM tool for the Chesapeake Bay watershed. In addition, we describe examples of map-based techniques for identifying high and low nutrient yield areas; web map engines; and data visualization and data management techniques.

Conference Paper↗

USGS2024

Using explainable machine learning methods to evaluate vulnerability and restoration potential of ecosystem state transitions

Ecosystem state transitions can be ecologically devastating or be a restoration success. State transitions are common within aquatic systems worldwide, especially considering human-mediated changes to land use and water use. We created a transferable conceptual framework to enable multiscale assessments of state resilience and early warnings of state transitions that can inform strategic restorations and avoid ecosystem collapse. The conceptual framework integrated machine learning predictions with ecosystem state concepts (e.g., state classification, gradients of vulnerability, and recovery potential leading to state transitions) and was devised to investigate possible environmental drivers. As an application of the framework, we generated prediction probabilities of submersed aquatic vegetation (SAV) presence at nearly 10,000 sites in the Upper Mississippi River (United States). Then, we used an interpretability method to explain model predictions to gain insights into possible environmental drivers and thresholds or linear responses of SAV presence and absence. Model accuracy was 89% without spatial bias. Average water depth, suspended solids, substrate, and distance to nearest SAV were the best predictors and likely environmental drivers of SAV habitat suitability. These environmental drivers exhibited nonlinear, threshold-type responses for SAV. All the results are also presented in an online dashboard to explore results at many spatial scales. The habitat suitability model outputs and prediction explanations from many spatial scales (4 m to 400 km of river reach) can inform research and restoration planning.

Conservation Biology↗

USGS2011

Mortality of American alligators attributed to cannibalism

Mortality of juvenile (<122 cm total length; TL) American Alligators ( Alligator mississippiensis ) attributed to cannibalism on Orange Lake, Florida was examined. Alligator web tags used in mark–recapture studies were found in 12% of 267 stomachs sampled from alligators ≥168 cm TL. Captive alligators retained 76% of force-fed tags during a 588-d tag-retention trial. Models relating the probability of tag recovery to the annual probabilities of juvenile survival, cannibalism, tag retention, adult survival, and adult harvest suggested that cannibalism may on average remove 6–7% of the juvenile alligator population annually. Vulnerability continued to 140 cm TL (age 6–8 yr). Cannibalism of juveniles may serve to regulate the alligator population on Orange Lake. Alligator cannibalism may vary widely among populations, depending on demography and environmental conditions. The role and importance of cannibalism in alligator population dynamics should be more fully assessed and environmental and population factors that influence cannibalism identified to better evaluate management programs.

Florida↗

USGS2011

Land-cover change research at the U.S. Geological Survey-assessing our nation's dynamic land surface

The U.S. Geological Survey (USGS) recently completed an unprecedented, 27-year assessment of land-use and land-cover change for the conterminous United States. For the period 1973 to 2000, scientists generated estimates of change in major types of land use and land cover, such as development, mining, agriculture, forest, grasslands, and wetlands. To help provide the insight that our Nation will need to make land-use decisions in coming decades, the historical trends data is now being used by the USGS to help model potential future land use/land cover under different scenarios, including climate, environmental, economic, population, public policy, and technological change.

Fact Sheet↗

USGS2023

Refining capture-recapture recruitment estimation methods for Atlantic sturgeon

The Atlantic sturgeon Acipenser oxyrinchus oxyrinchus was once of great commercial importance in many coastal rivers of the eastern USA. Over the 19th and 20th centuries, most historical stocks of Atlantic sturgeon were depleted by human activities. Estimating recruitment for the remaining populations is challenging due to sampling constraints, limited age data, and natural variability. However, recruitment estimates could inform recovery efforts. The objectives of this study were to compare 2 modeling approaches to estimate recruitment of age-1 Atlantic sturgeon and provide an updated index of abundance across more than a decade of sampling in the Altamaha River, Georgia. First, we constructed capture histories of river-resident juveniles, using capture-mark-recapture data collected from 2008 to 2020, and assigned ages based on length-frequency analysis. Second, we compared more traditional Huggins closed population models and a recent nonlinear extension of Huggins models—vector generalized additive models (VGAMs)—to estimate abundance of age-1 fish. Both model types indicated similar yearly age-1 abundance estimates (Huggins: 163 in 2017 to 3839 in 2010; VGAM: 312 in 2020 to 4448 in 2010), but the VGAMs provided more direct interpretation for factors that might affect capture probability (e.g. sampling effort, temperature, fish length). This study indicates that the age-1 Altamaha River Atlantic sturgeon population has remained relatively stable over the past decade and provides a long-term baseline which will better enable managers to assess the effects of either future restoration actions or environmental disturbances on the population.

Georgia↗

USGS2023

Using high-frequency monitoring data to quantify city-wide suspended-sediment load and evaluate TMDL goals

Excess sediment is a common reason water bodies in the USA become listed as impaired resulting in total maximum daily loads (TMDL) that require municipalities to invest millions of dollars annually on management practices aimed at reducing suspended-sediment loads (SSLs), yet monitoring data are rarely used to quantify SSLs and track TMDL progress. A monitoring network was created to quantify the SSL from the City of Roanoke, Virginia, USA (CoR), to the Roanoke River and Tinker Creek and help guide TMDL assessment and implementation. Suspended-sediment concentrations were estimated between 2020 and 2022 from high-frequency turbidity data using surrogate linear-regression models. Sixty-one percent of the total three-year SSL resulted from five large storm events. The average suspended-sediment yield from the CoR (58.1 metric tons/km 2 /year) was similar to other urban watersheds in the Eastern United States; however, the yield was nearly five times larger than the TMDL allocation (12.2 metric tons/km 2 /year). The TMDL allocated load was modeled based on a predominantly forested reference watershed and may not be a practical target for highly impervious watersheds within the CoR. The TMDL model used daily input data which likely does not capture the full range of SSLs during storm events, particularly from flashy urban streams. The average SSL following the five large storm events doubled that of the CoR’s annual allocated load from the TMDL. The results of this study highlight the importance of using high-frequency monitoring data to accurately estimate SSLs and evaluate TMDLs in urban areas.

Virginia↗