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Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

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At least 685 records · Page 38Linked to original sources
USGS2012

Plague

Plague offers readers an overview of this highly complex disease caused by the bacteria Yersinia pestis . The history of the disease, as well as information about Yersinia pestis and its transmission by fleas, is described. The section Geographic Distribution presents areas of the world and United States where plague occurs most commonly in rodents and humans. Species Susceptibility describes infection and disease rates in rodents, humans, and other animals. Disease Ecology considers the complex relationship among rodents, domestic and wild animals, and humans and explores possible routes of transmission and maintenance of the organism in the environment. The effects of climate change, the potential for Y. pestis to be used as a bioweapon, and the impact of plague on conservation of wildlife are considered in Points to Ponder . Disease Prevention and Control outlines methods of prevention and treatment including vaccination for prairie dogs and black-footed ferrets. A glossary of technical terms is included. Tonie E. Rocke, the senior author and an epizootiologist at the USGS National Wildlife Health Center (NWHC), is a prominent researcher on oral vaccination of prairie dogs to prevent plague. She is currently working to transfer her success in the laboratory to the field to control plague in prairie dogs. Rachel C. Abbott, a biologist at the NWHC, is assisting Dr. Rocke in this process and will coordinate field trials of the vaccine. Milt Friend, first director of the NWHC, wrote the foreword. Plague is intended for scholars and the general public. The material is presented in a simple, straightforward manner that serves both audiences. Numerous illustrations and tables provide easily understood summaries of key points and information.

Circular↗
USGS2020

Simultaneous observations of geoelectric and geomagnetic fields produced by magnetospheric ULF waves

Geomagnetic perturbations ( B G E O ) related to magnetospheric ultralow frequency (ULF) waves induce electric fields within the conductive Earth—geoelectric fields ( E G E O )—that in turn drive geomagnetically induced currents. Though numerous past studies have examined ULF wave B G E O from a space weather perspective, few studies have linked ULF waves with E G E O . Using recently available magnetotelluric impedance and E G E O measurements in the contiguous United States, we explore the relationship between ULF waves and E G E O . We use satellite, ground‐based radar, B G E O , and E G E O measurements in a case study of a plasmaspheric virtual resonance (PVR), demonstrating that the PVR E G E O has significant spatial variation in contrast to a relatively uniform B G E O , consistent with spatially varying Earth conductivity. We further show ULF wave E G E O measurements during two moderate storms of ∼ 1 V/km. We use both results to highlight the need for more research characterizing ULF wave E G E O .

Geophysical Research Letters↗
USGS2025

The communication of volcano information in New Zealand - A narrative review

Communication of volcano information is critical for effective volcanic risk management. A variety of information is communicated to inform decisions and guide actions for planning, preparedness, and response. Such information needs to be reliable, and fit-for-purpose across different stages of volcanic activity (quiescence, unrest, short or long-term eruptive stages, and the post-eruptive stage). However, an understanding of communication across these different stages of volcanic activity remains limited. We undertook a narrative review of New Zealand literature to explore what information is communicated about volcanoes, across which stages of activity and by whom. Results highlight that NZ literature only documents certain aspects of volcano information and communication, specifically regarding certain locations, stages of volcanic activity (i.e. quiescence or unrest), or hazards. Literature gaps exist regarding volcano communication during unrest and post-eruptive stages, as well as how volcano information evolves between these phases, and how decision-makers use such information. Additional work would be useful to document existing examples of volcano information for different stages of activity. Further research could help in understanding the information needs of decision-makers during each of these stages to improve information and communication.

New Zealand Journal of Geology and Geophysics↗
USGS2023

Sound and sturgeon: Bioacoustics and anthropogenic sound

Sturgeons are basal bony fishes, most species of which are considered threatened and/or endangered. Like all fishes, sturgeons use hearing to learn about their environment and perhaps communicate with conspecifics, as in mating. Thus, anything that impacts the ability of sturgeon to hear biologically important sounds could impact fitness and survival of individuals and populations. There is growing concern that the sounds produced by human activities (anthropogenic sound), such as from shipping, commercial barge navigation on rivers, offshore windfarms, and oil and gas exploration, could impact hearing by aquatic organisms. Thus, it is critical to understand how sturgeon hear, what they hear, and how they use sound. Such data are needed to set regulatory criteria for anthropogenic sound to protect these animals. However, very little is known about sturgeon behavioral responses to sound and their use of sound. To help understand the issues related to sturgeon and anthropogenic sound, this review first examines what is known about sturgeon bioacoustics. It then considers the potential effects of anthropogenic sound on sturgeon and, finally identifies areas of research that could substantially improve knowledge of sturgeon bioacoustics and effects of anthropogenic sound. Filling these gaps will help regulators establish appropriate protection for sturgeon.

The Journal of the Acoustical Society of America↗
USGS2021

Preface to the Focus Section on the 2020 Intermountain West earthquakes

The Intermountain West region of the United States extends from the eastern margin of the Sierra Nevada and Cascade Mountains in the west to the Rocky Mountains in the east. The region is characterized by dextral shear along the eastern margin of the Sierra Nevada and nearly east-west extension in the Basin and Range. This region experienced four significant earthquake sequences in the first half of 2020. The most significant mainshocks were the 18 March 2020 Mw 5.7 earthquake north of Magna, Utah (a suburb of Salt Lake City), the 31 March 2020 Mw 6.5 earthquake northwest of Stanley, Idaho, the 15 May 2020 Mw 6.5 earthquake in the Monte Cristo Range, northwest of Tonopah, Nevada, and the 24 June 2020 Mw 5.8 earthquake near Lone Pine, California. The 15 articles appearing in this focus section explore timely and important topics associated with these sequences, including kinematic rupture models, near-field ground motions, aftershock statistics, geologic observations, seismic hazard implications, and seismotectonics. It is noteworthy that the efforts to record and characterize these earthquake sequences took place during travel and work restrictions necessitated by the COVID-19 pandemic.

Seismological Research Letters↗
USGS2005

Wagon loads of sand blows in White County, Illinois

Several anecdotal accounts provide compelling evidence that liquefaction occurred at several sites in Illinois during the 1811-1812 New Madrid sequence, as much as 250 km north of the New Madrid seismic zone (NMSZ). At one Wabash Valley location, sand blows are still evident near Big Prairie, Illinois, a location described in a particularly detailed and precise historic account. This account includes descriptions of substantial liquefaction (sand blows) as well as a two-mile-long east-west-trending “crack” along which two feet of south-side-down displacement occurred. An offset can no longer be seen at this location, which has been extensively farmed and plowed for decades. Field reconnaissance verifies many of the details provided in the account, however. We conducted a seismic-reflection experiment at this location and observed a modest offset in the Paleozoic strata at this location. The offset is opposite to that described in the historic account, consistent with the hypothesis that large midcontinent earthquakes occur on faults reactivated in a Holocene stress regime different from the one in which they were formed. Only two explanations can account for these observations: Either large NMSZ events triggered substantial liquefaction at distances greater than hitherto realized, or at least one large “New Madrid” event occurred significantly north of the NMSZ. We explore these possibilities and conclude that, while neither one can be ruled out, several disparate lines of evidence suggest that the 23 January 1812 “New Madrid mainshock” occurred in White County, Illinois, near the location of the m b 5.5 1968 southern Illinois earthquake and recent microearthquake activity.

Illinois↗
USGS2019

Discovery of an extensive deep-sea fossil serpulid reef associated with a cold seep, Santa Monica Basin, California

Multi-beam mapping of the Santa Monica Basin in the eastern Pacific has revealed the existence of a number of elevated bathymetric features, or mounds, harboring cold seep communities. During 2013-2014, mounds at ~600 m water depth were observed for the first time and sampled by Monterey Bay Aquarium Research Institute’s ROV Doc Ricketts. Active cold seeps were found, but surprisingly one of these mounds was characterized by massive deposits composed of fossil serpulid worm tubes (Annelida: Serpulidae) exhibiting various states of mineralization by authigenic carbonate. No living serpulids with equivalent tube morphologies were found at the site; hence the mound was termed ‘Fossil Hill’. In the present study, the identity of the fossil serpulids and associated fossil community, the ages of fossils and authigenic carbonates, the formation of the fossil serpulid aggregation, and the geological structure of the mound are explored. Results indicate that the tubes were most likely made by a deep-sea serpulid lineage, with radiocarbon dating suggesting that they have a very recent origin during the Late Pleistocene, specifically to the Last Glacial Maximum ~20,000 years ago. Additional U-Th analyses of authigenic carbonates mostly corroborate the radiocarbon dates, and also indicate that seepage was occurring while the tubes were being formed. We also document similar, older deposits along the approximate trajectory of the San Pedro Basin Fault. We suggest that the serpulid tube facies formed in situ, and that the vast aggregation of these tubes at Fossil Hill is likely due to a combination of optimal physical environmental conditions and chemosynthetic production, which may have been particularly intense as a result of sea-level lowstand during the Last Glacial Maximum.

California↗
USGS2019

Discriminating among Pacific salmon, Rainbow Trout, and Atlantic Salmon species using common genetic screening methods

The five most common species of Pacific salmon, Rainbow Trout (steelhead) Oncorhynchus spp., and Atlantic Salmon Salmo salar intermingle in the North Pacific Ocean and its freshwater tributaries. Efficient morphological methods for distinguishing among these species are sometimes limited by condition of the specimen (degraded or missing morphology), life history stage, or training of the observer. Researchers have successfully applied various genetic methods to distinguish among these species when morphological analyses are not possible, but they cannot easily incorporate these methods into standard fish and wildlife population monitoring analysis workflows. Here we test five 5′–3′ exonuclease (TaqMan) assays developed from mitochondrial genes and provide novel methods that take advantage of TaqMan output to distinguish among these species. We found that combinations of as few as two of the five assays were adequate to distinguish all species. TaqMan chemistry is designed to interrogate a single nucleotide locus. We also explore the basis for the variation in the observed scatter plot distributions (variation in florescent signals) and show that this variation is due to nucleotide diversity in and near the probe site. Because the SNPs underlying the assays developed here are all physically close to one another along the mitochondrial genome, the potential exists to develop a single DNA sequence-based assay to discriminate among salmon species. This single assay can be added to a genotyping-by-sequencing panel to identify and exclude nontarget species from analyses.

Journal of Fish and Wildlife Management↗
USGS2024

Joint pilot fish habitat framework

This story map will take you through the process of exploring and testing methods necessary for a higher resolution, seamless fish habitat assessment across both inland and estuarine waters through the lens of our joint pilot assessment Fish habitat assessments attempt to relate past, current, or future landscape conditions to the state of fish species occurrence, distribution, abundance, or community and habitat condition in streams, rivers, or estuaries. Previous fish habitat assessments, such as the National Fish Habitat Assessment, conducted separate and disconnected assessments for inland waters and estuaries. In this project, National Oceanic and Atmospheric Administration ( NOAA ) and U.S. Geological Survey ( USGS ) researchers created a seamless spatial framework to allow assessments that integrate influences on fish habitat from headwaters to the estuary. This effort began when the Chesapeake Bay Program Fish Habitat Action Team expressed interest in a Baywide fish habitat assessment spanning tidal salt, tidal fresh, warm non-tidal, and cold non-tidal waters. However, the complexity of the myriad of implementation details to consider when developing such an assessment necessitated the need for a tributary-specific pilot assessment. To conduct this pilot assessment, a NOAA/USGS joint partnership was formed with cooperation and support from the Chesapeake Bay Agreement and Chesapeake Bay Fish Habitat Action Team (FHAT).

Maryland↗
USGS2025

The role of bedrock circulation depth and porosity in mountain streamflow response to prolonged drought

Quantitative understanding is lacking on how the depth of active groundwater circulation in bedrock affects mountain streamflow response to a multi‐year drought. We use an integrated hydrological model to explore the sensitivity of a variety of streamflow metrics to bedrock circulation depth and porosity under a plausible extreme drought scenario lasting up to 5 years. Endmember depth versus hydraulic conductivity relationships and porosity values for fractured crystalline rock are simulated. With drought, a deeper circulation system with higher drainable porosity more effectively buffers minimum flow and significantly limits perennial stream loss in comparison to a shallow circulation system. Streamflow buffering is accomplished through extensive groundwater storage loss. However, deeper circulation systems experience prolonged recovery from drought in comparison to storage‐limited shallow systems. Research highlights the importance of characterizing the deeper bedrock hydrogeology in mountainous watersheds to better understand and predict drought impacts on stream ecosystem health and water resource sustainability.

Colorado↗
USGS2026

When best intentions are not enough - A collaboration between scientists, policymakers, and an agricultural community

Rocky Mountain National Park is a Congressionally mandated Clean Air Act Class I Area, but years of research have documented evidence of biogeochemical and ecological change caused by atmospheric deposition of nitrogen. A coalition of government agencies—National Park Service, the Environmental Protection Agency Region 8, and the State of Colorado—developed the 2007 Nitrogen Deposition Reduction Plan to reduce wet nitrogen deposition to the park from the baseline in 2006 by 50% by 2032. Fifty-four percent of wet nitrogen deposition is ammonium, primarily sourced from industrial cattle and dairy operations east of the park. An Agriculture Subcommittee, meeting with regulatory and management agencies and scientists since 2006, has explored voluntary options to reduce ammonia emissions. Ammonia emissions are unregulated in the U.S. Despite sustained efforts, neither ammonium deposition nor total inorganic nitrogen deposition have declined at the rate determined to reach the targeted value by 2032. In fact, ammonia is increasing over the Front Range agricultural area. Wet nitrogen deposition in 2024 was 2.81 kg N ha −1 yr −1 , 0.61 kg N ha −1 yr −1 higher than targeted in the Nitrogen Deposition Reduction Plan. The collaborative approach between agricultural producers, regulatory entities, and resource managers is not working, but not for lack of effort by all parties. Cattle process nitrogen inefficiently, and while management practices can somewhat reduce the proportion of ammonia emitted from feedlots, with more than one million head of cattle east of Rocky Mountain National Park, large-scale reductions are unlikely. New programs to reduce emissions of nitrogen oxides (46% of wet nitrogen deposition) may reduce nitrogen deposition that is changing park ecosystems. Improved integration of crop and livestock agriculture and valuation of the ecosystem services and economy of Rocky Mountain National Park alongside agricultural value are topics for further discussion. Implications : Nitrogen deposition in precipitation to Rocky Mountain National Park has changed natural ecosystems. To protect its Clean Air Act Class I status a 2007 Nitrogen Deposition Reduction Plan agreed upon by state and federal agencies set a goal to reduce wet nitrogen deposition to the Park by half by 2032. Industrial livestock operations are a large source of nitrogen; an Agriculture Subcommittee explored voluntary options to reduce emissions from cattle. Despite sustained efforts nitrogen deposition has not declined. Further reductions in industry and transportation emissions will be needed reduce nitrogen deposition to Rocky Mountain National Park.

Colorado↗
USGS2021

Applications of bistatic radar to volcano topography – A review of 10 years of TanDEM-X

The TanDEM-X satellite mission has revolutionized DEM generation from spaceborne synthetic aperture radar. In addition to the primary objective of generating a consistent digital elevation model with global coverage and unprecedented accuracy, the mission has acquired time series of topographic data over several volcanoes, providing an excellent opportunity to test the use of this innovative dataset for volcano monitoring and research. In this article, we review the utilization of the single-pass TanDEM-X data for studying various kinds of volcanic activity, such as basaltic lava flows, the formation and destruction of lava domes and related pyroclastic density currents, and subsurface magma withdrawal and intrusion. We then consider the uses of these data for hazard assessment and forecasting. Our goal is to highlight the importance of timely and repeated topographic information in volcanology, and to suggest the development of future spaceborne bistatic synthetic aperture radar satellite missions, such as ESA's Earth Explorer 10 candidate mission, “Harmony.”

IEEE Journal of Selected Topics in Applied Earth O↗
USGS2011

Developing a regional canopy fuels assessment strategy using multi-scale lidar

Accurate assessments of canopy fuels are needed by fire scientists to understand fire behavior and to predict future fire occurrence. A key descriptor for canopy fuels is canopy bulk density (CBD). CBD is closely linked to the structure of the canopy; therefore, lidar measurements are particularly well suited to assessments of CBD. LANDFIRE scientists are exploring methods to integrate airborne and spaceborne lidar datasets into a national mapping effort. In this study, airborne lidar, spaceborne lidar, and field data are used to map CBD in the Yukon Flats Ecoregion, with the airborne lidar serving as a bridge between the field data and the spaceborne observations. The field-based CBD was positively correlated with airborne lidar observations (R2=0.78). Mapped values of CBD using the airborne lidar dataset were significantly correlated with spaceborne lidar observations when analyzed by forest type (R2=0.62, evergreen and R2=0.71, mixed). Though continued research is necessary to validate these results, they do support the feasibility of airborne and, most importantly, spaceborne lidar data for canopy fuels assessment.

Alaska↗
USGS2019

Offset channels may not accurately record strike-slip fault displacement: Evidence from landscape evolution models

Slip distribution, slip rate, and slip per event for strike‐slip faults are commonly determined by correlating offset stream channels—under the assumption that they record seismic slip—but offset channels are formed by the interplay of tectonic and geomorphic processes. To constrain offset channel development under known tectonic and geomorphic conditions, we use numerical landscape evolution simulations along a theoretical strike‐slip fault with uniform and steady uplift, erosion, and diffusion. We investigate the influence of four tectonic parameters (fault zone width, earthquake recurrence interval, variance of the recurrence interval, and total slip relative to channel spacing) on offset channel development through multiple earthquake cycles. Analysis of >3,000 automatically measured offsets from >135 simulations suggests ~30% variability in individual measurements, but modeled displacement is recovered by averaging multiple measurements. However, the average of multiple offset measurements systematically underestimates modeled slip except when the fault zone is less than ~5 m wide, total slip is less than channel spacing, and offsets are measured shortly after an earthquake. In these simulations, postearthquake landscape evolution widens the geomorphic expression of the fault zone and modifies apparent channel offsets. We distinguish this “geomorphic fault zone” from the tectonic fault zone (zone of coseismic distributed deformation). This study highlights the capability of landscape evolution models to explore a range of conditions not easily defined in natural examples and the importance of averaging multiple measurements. Our results verify that paleoseismic studies must consider how geomorphic change has modified offset markers and use caution interpreting slip histories with multiple earthquakes.

Journal of Geophysical Research Solid Earth↗
USGS2025

Microbial ecology of permafrost soils: Populations, processes, and perspectives

Permafrost microbial research has flourished in the past decades, due in part to improvements in sampling and molecular techniques, but also the increased focus on the permafrost greenhouse gas feedback to climate change and other ecological processes in high latitude and alpine permafrost soils. Permafrost microorganisms are adapted to these extreme environments and remain active at low temperatures and when resources are limited. They are also an important component of global elemental cycles as they regulate organic matter turnover and greenhouse gas production, particularly as permafrost thaws. Here we review the permafrost microbiology literature coupled with an exploration of its historical aspects, with a particular focus on a new understanding advanced by molecular biology techniques. We further identify knowledge gaps and ways forward to improve our understanding of microbial contributions to ecosystem biogeochemistry of permafrost-affected systems.

Permafrost and Periglacial Processes↗
USGS2009

Social and Economic Considerations for Coastal and Watershed Restoration in the Puget Sound, Washington: A Literature Review

This literature review summarizes and synthesizes the available information regarding the impacts of socioeconomic factors on coastal and watershed restoration in the Puget Sound, Wash. Major topic areas which are explored include: institutions and restoration; beliefs, behaviors, and knowledge about restoration and the environment; stakeholder involvement in restoration, communication of restoration issues, and economic issues in restoration. The review revealed that socioeconomic factors play an important role in determining the designation, process, and success of restoration projects. Socioeconomic factors can facilitate or obstruct restoration, but few large-scale restoration projects emphasize them in either prioritization or monitoring procedures. Additionally, there are substantial gaps in the literature regarding restoration in the Puget Sound across all of the topics addressed in this review. The lack of research makes it difficult to provide a holistic view of the social and economic dimensions of restoration in the Sound but provides opportunity for future research.

Open-File Report↗
USGS2002

Rocky Mountain futures: An ecological perspective

The Rocky Mountain West is largely arid and steep, with ecological scars from past human use visible for hundreds of years. Just how damaging were the past 150 years of activity? How do current rates of disturbance compare with past mining, grazing, and water diversion activities? In the face of constant change, what constitutes a "natural" ecosystem? And can a high quality of life be achieved for both human and natural communities in this region. Rocky Mountain Futures presents a comprehensive and wide-ranging examination of the ecological consequences of past, current, and future human activities in the Rocky Mountain region of the United States and Canada. The book brings together 32 leading ecologists, geographers, and other scientists and researchers to present an objective assessment of the cumulative effects of human activity on the region's ecological health and to consider changes wrought by past human use. This combined view of past and present reveals where Rocky Mountain ecosystems are heading, and the authors project what the future holds based upon current economic and social trends and the patterns that emerge from them. The book: examines the biogeographic and paleoenvironmental setting and historical climate that have shaped Rocky Mountain ecosystems traces the direct human influences on landscapes and ecosystems over the past 150 years explores the cumulative effects of past, present, and projected future human activities on tundra, subalpine and montane forests, valleys, grasslands, and waters offers case studies that illustrate specific examples of human influence and current efforts to restore the environment Case studies focus on northern New Mexico; Summit County, Colorado; Flathead Valley, Montana; and Alberta, Canada. Among the contributors are Craig D. Allen, N. Thompson Hobbs, Linda L. Joyce, Robert E. Keane, David Schindler, Timothy R. Seastedt, David Theobald, Diana Tomback, William Travis, Cathy Whitlock, and Jack Stanford. The United Nations has proclaimed 2002 as the International Year of Mountains to increase international awareness of the global importance of mountain ecosystems. The case-based multidisciplinary approach of this book constitutes an important new model for understanding the implications of land-use practices and economic activity on mountains, and will serve a vital role in improving decisionmaking both in the Rocky Mountains and in other parts of the world that face similar challenges.

Book↗
USGS2015

Predicting the resilience and recovery of aquatic systems: a framework for model evolution within environmental observatories

Maintaining the health of aquatic systems is an essential component of sustainable catchmentmanagement, however, degradation of water quality and aquatic habitat continues to challenge scientistsand policy-makers. To support management and restoration efforts aquatic system models are requiredthat are able to capture the often complex trajectories that these systems display in response to multiplestressors. This paper explores the abilities and limitations of current model approaches in meeting this chal-lenge, and outlines a strategy based on integration of flexible model libraries and data from observationnetworks, within a learning framework, as a means to improve the accuracy and scope of model predictions.The framework is comprised of a data assimilation component that utilizes diverse data streams from sensornetworks, and a second component whereby model structural evolution can occur once the model isassessed against theoretically relevant metrics of system function. Given the scale and transdisciplinarynature of the prediction challenge, network science initiatives are identified as a means to develop and inte-grate diverse model libraries and workflows, and to obtain consensus on diagnostic approaches to modelassessment that can guide model adaptation. We outline how such a framework can help us explore thetheory of how aquatic systems respond to change by bridging bottom-up and top-down lines of enquiry,and, in doing so, also advance the role of prediction in aquatic ecosystem management.

Water Resources Research↗