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Harvesting wildlife affected by climate change: a modelling and management approach for polar bears

The conservation of many wildlife species requires understanding the demographic effects of climate change, including interactions between climate change and harvest, which can provide cultural, nutritional or economic value to humans. We present a demographic model that is based on the polar bear Ursus maritimus life cycle and includes density-dependent relationships linking vital rates to environmental carrying capacity ( K ). Using this model, we develop a state-dependent management framework to calculate a harvest level that (i) maintains a population above its maximum net productivity level (MNPL; the population size that produces the greatest net increment in abundance) relative to a changing K , and (ii) has a limited negative effect on population persistence. Our density-dependent relationships suggest that MNPL for polar bears occurs at approximately 0·69 (95% CI = 0·63–0·74) of K . Population growth rate at MNPL was approximately 0·82 (95% CI = 0·79–0·84) of the maximum intrinsic growth rate, suggesting relatively strong compensation for human-caused mortality. Our findings indicate that it is possible to minimize the demographic risks of harvest under climate change, including the risk that harvest will accelerate population declines driven by loss of the polar bear's sea-ice habitat. This requires that (i) the harvest rate – which could be 0 in some situations – accounts for a population's intrinsic growth rate, (ii) the harvest rate accounts for the quality of population data (e.g. lower harvest when uncertainty is large), and (iii) the harvest level is obtained by multiplying the harvest rate by an updated estimate of population size. Environmental variability, the sex and age of removed animals and risk tolerance can also affect the harvest rate. Synthesis and applications . We present a coupled modelling and management approach for wildlife that accounts for climate change and can be used to balance trade-offs among multiple conservation goals. In our example application to polar bears experiencing sea-ice loss, the goals are to maintain population viability while providing continued opportunities for subsistence harvest. Our approach may be relevant to other species for which near-term management is focused on human factors that directly influence population dynamics within the broader context of climate-induced habitat degradation.

Journal of Applied Ecology↗

Value-aligned planning objectives for restoring North Carolina aquatic resources

Rapid population growth and development in the southeastern United States have resulted in substantial impairment to freshwater aquatic ecosystems. National or regional restoration policies strive to address impaired ecosystems but can suffer from inconsistent and opaque processes. The Clean Water Act, for example, establishes reallocation mechanisms to transfer ecosystem services from sites of disturbance to compensation sites to offset aquatic resource functions that are unavoidably lost through land development. However, planning for the prioritization of compensatory mitigation areas is often hampered by unstructured decision-making processes that are narrowly framed because they are not co-produced with stakeholders affected by, or having an interest in, the impacts and mitigation. This summary report represents the collaborative efforts of the U.S. Geological Survey and the North Carolina Department of Environmental Quality, Division of Mitigation Services, to co-develop an applied decision framework following the principles of structured decision-making for prioritizing watershed catchments by their potential for realizing a range of beneficial outcomes from future mitigation projects. The framework focuses on supporting the State’s nationally recognized stream and wetlands compensatory mitigation program by clarifying a discrete decision problem and specifying agency and stakeholder values to formulate fundamental and means objectives for prioritizing restoration sites. The co-development of this decision framework resulted in a number of useful insights from the perspective of the decision maker, including recognition (1) that the problem is a multi-objective decision driven by values beyond restoring lost functionality of ecosystems (that is, biogeophysical goals), (2) that the decision comprises a linked and sequential planning-to-implementation process, and (3) that future risk associated with land-use and climate change must be considered. The outcomes of this collaboration can serve as a systematic and transparent framework to prioritize a wide range of restoration, conservation, and resource-allocation activities in similar environmental contexts across the Nation.

North Carolina↗

Population genetic structure of clinical and environmental isolates of Blastomyces dermatitidis based on 27 polymorphic microsatellite markers

Blastomyces dermatitidis , a thermally dimorphic fungus, is the etiologic agent of North American blastomycosis. Clinical presentation is varied, ranging from silent infections to fulminant respiratory disease and dissemination to skin and other sites. Exploration of the population genetic structure of B. dermatitidis would improve our knowledge regarding variation in virulence phenotypes, geographic distribution, and difference in host specificity. The objective of this study was to develop and test a panel of microsatellite markers to delineate the population genetic structure within a group of clinical and environmental isolates of B. dermatitidis . We developed 27 microsatellite markers and genotyped B. dermatitidis isolates from various hosts and environmental sources ( n =112). Assembly of a neighbor-joining tree of allele-sharing distance revealed two genetically distinct groups, separated by a deep node. Bayesian admixture analysis showed that two populations were statistically supported. Principal coordinate analysis also reinforced support for two genetic groups, with the primary axis explaining 61.41% of the genetic variability. Group 1 isolates average 1.8 alleles/locus, whereas group 2 isolates are highly polymorphic, averaging 8.2 alleles/locus. In this data set, alleles at three loci are unshared between the two groups and appear diagnostic. The mating type of individual isolates was determined by PCR. Both mating type-specific genes, the HMG and α-box domains, were represented in each of the genetic groups, with slightly more isolates having the HMG allele. One interpretation of this study is that the species currently designated B. dermatitidis includes a cryptic subspecies or perhaps a separate species.

Applied and Environmental Microbiology↗

Geese migrating over the Pacific Ocean select altitudes coinciding with offshore wind turbine blades

Renewable energy facilities are a key part of mitigating climate change, but can pose threats to wild birds and bats, most often through collisions with infrastructure. Understanding collision risk and the factors affecting it can help minimize impacts on wild populations. For wind turbines, flight altitude is a major factor influencing collision risk, and altitude-selection analyses can evaluate when and why animals fly at certain altitudes under certain conditions. We used GPS tags to track Pacific Flyway geese (Pacific greater white-fronted goose, tule greater white-fronted goose and lesser snow goose) on transoceanic migrations between Alaska and the Pacific Coast of the contiguous United States, an area where offshore windfarm development is beginning. We evaluated how geographic and environmental covariates affected (1) whether birds were at rest on the water versus in flight (binomial model) and (2) altitude selection when in flight (similar to a step-selection framework). We then used a Monte Carlo simulation to predict the probability of flying at each altitude under various conditions, considering both the fly/rest decision and altitude selection. In both spring and fall, geese showed strong selection for altitudes within the expected rotor-swept zone (20–200 m asl), with 56% of locations expected to be within the rotor-swept zone under mean daylight conditions and 28% at night. This indicates a high possibility that migrating geese may be at risk of collision when passing through windfarms. Although there was some variation across subspecies, geese were most likely to be within the rotor-swept zone with little wind or light tailwinds, low clouds, little to no precipitation and moderate to cool air temperatures. Geese were unlikely to be in the rotor-swept zone at night, when most individuals were at rest on the water. Synthesis and applications . These results could be used to inform windfarm management, including decisions to shut down turbines when collision risk is high. The altitude-selection framework we demonstrate could facilitate further study of other bird species to develop a holistic view of how windfarms in this area could affect the migratory bird community as a whole.

Journal of Applied Ecology↗

Potential effects of increased ground-water pumpage on Barka Slough, San Antonio Creek Valley, Santa Barbara County, California

Ground-water use in San Antonio Creek valley is expected to increase significantly as a result of planned extensive agricultural development in the basin. The effects of this additional stress on the ground-water system, particularly on the environmentally sensitive Barka, Slough, are of concern in the basin. Expectations of the developer are that about 6,640 acre-feet per year of additional consumptive ground-water use will be required to irrigate an agricultural development of 2,500 acres of vineyards and 1,200 acres of truck-farmed vegetables. This represents an increase in net basin pumpage of about 60 percent. The developer plans to obtain this water from 12 large-diameter irrigation wells in the Harris Canyon area. Analysis of the potential drawdowns in the vicinity of Barka Slough, by using the Theis nonequilibrium formula, indicates that drawdowns would average 6 feet after 10 years of pumping and would eventually exceed 10 feet. Because the artesian head in the aquifer that supplies the slough is generally less than 3 feet above land surface, these declines would probably mean that the wetlands of Barka Slough would disappear. An empirical relation, based on historical records of base flow in San Antonio Creek and net pumpage in the basin, also indicates that the additional irrigation withdrawals would cause base flow in San Antonio Creek to cease. Both of these analyses consider the effects of only this particular agricultural development, which would be in addition to any decline caused by other increases in pumpage in the basin.

California↗

Surface-water-quality data to support implementation of revised freshwater aluminum water-quality criteria in Massachusetts, 2018–19

The U.S. Geological Survey, in cooperation with the Massachusetts Department of Environmental Protection, performed a study to inform the development of the department’s guidelines for the collection and use of water-chemistry data to support calculation of site-dependent aluminum criteria values. The U.S. Geological Survey collected and analyzed discrete water-quality samples at four wastewater-treatment facilities and seven water-treatment facilities in eastern and central Massachusetts from April 2018 through May 2019. For each of the 11 facilities considered, water-quality samples were collected from treatment-plant effluent and receiving-water bodies. Samples were collected for laboratory analysis of major ions (calcium and magnesium ions are used to calculate total hardness), dissolved organic carbon (DOC), total organic carbon (TOC), and total recoverable aluminum. Field parameters for pH, temperature, and specific conductance were measured in situ concurrently with sample collection. Water-quality conditions differed among monitoring stations. The highest pH values were observed for stations on the Assabet River that receive effluent discharges from wastewater-treatment facilities (the Westborough, Marlborough, Hudson, and Maynard wastewater-treatment facilities). High DOC concentrations (greater than 10 mg/L) were measured in water bodies associated with large areas of riparian wetlands—Lily Pond (Cohasset) and Third Herring Brook (Hanover), and low DOC concentrations (less than 2.5 mg/L) were measured at three water bodies in central Massachusetts—Hocomonco Pond (Westborough), Wyman Pond (Fitchburg), and Monoosnoc Brook (Leominster). Wyman Pond (Fitchburg), Monoosnoc Brook (Leominster), and Lily Pond (Cohasset) also had low pH values and low total hardness concentrations. The monthly discrete pH, DOC, and total hardness data for selected stations on receiving-water bodies were used in the U.S. Environmental Protection Agency Aluminum Criteria Calculator Version 2.0 to estimate site-dependent total recoverable aluminum concentrations that—if not exceeded—would be expected to protect fish, invertebrates, and other aquatic life from adverse effects associated with acute and chronic aluminum exposures. The U.S. Environmental Protection Agency Calculator output provides values for the acute criterion, defined as the criterion maximum concentration (CMC), an estimate of the highest aluminum concentration in surface water to which an aquatic community can be exposed briefly without resulting in an unacceptable effect. This output also provides values for the chronic criterion, defined as the criterion continuous concentration (CCC), an estimate of the highest concentration of aluminum in surface water to which an aquatic community can be exposed indefinitely without resulting in an unacceptable effect. To determine aluminum criteria values typically evaluated for use as protective water-quality criteria, the monthly instantaneous CMC and CCC values were used to calculate the minimum, 5th percentile, and 10th percentile CMC and CCC values for selected monitoring stations. The monthly instantaneous aluminum CMC and CCC values generated using the EPA Calculator varied among stations. Aluminum CMC and CCC values were highest for four ambient (upstream) stations on the Assabet River associated with wastewater-treatment facilities (Westborough, Marlboro, Hudson, and Maynard). Aluminum CMC and CCC values were lower for stations associated with water-treatment facilities, and lowest for selected ambient stations on Lily Pond, Monoosnoc Brook, and Wyman Pond associated with water-treatment facilities in Cohasset, Leominster, and Fitchburg, respectively. For many stations, the highest CMC and CCC instantaneous aluminum criteria values generated using the U.S. Environmental Protection Agency Calculator were for months during the growing season for algae and aquatic macrophytes (April or May through September or October) and the lowest values were for months during the nongrowing season (October or November through March or April), indicating the importance of collecting water-quality data during the nongrowing season. Aluminum CMC and CCC values generated by the U.S. Environmental Protection Agency Calculator are sensitive to variations in the input parameters (pH, DOC, and total hardness). Aluminum solubility is particularly affected by pH. To characterize diel and seasonal variations in pH, multiparameter water-quality monitors recording continuous (15-minute interval) water temperature and pH were installed in the receiving-water body for one station near each facility upstream from the effluent discharge (in rivers) or at a station outside the immediate effect of effluent discharge (in ponds). Continuous water temperature and pH data were collected from April or May 2018 through November or December 2018. Continuous pH data indicated that the pond stations and Assabet River stations had large diel variations in pH during the growing season. Continuous pH data were used together with discrete DOC and total hardness data to evaluate the potential effect of diel variations in pH on calculated site-dependent aluminum criteria values. For the 11 stations, diel variations in pH were determined to correspond to differences in the 10th percentile of CMC values by a median of 160 μg/L, ranging from 0 to 610 μg/L, and differences in the 10th percentile of CCC values by a median of 40 μg/L, ranging from 15 to 210 μg/L. The low monthly instantaneous CMC and CCC values that have the greatest effect on the minimum, 5th percentile, and 10th percentile aluminum values tend to result during the nongrowing season (October or November through March or April) when the range of diel variations in pH is small, thus minimizing the effect of diel variations in pH on the lowest CMC and CCC values. Historical water-quality data on organic carbon in Massachusetts streams were investigated using data retrieved from the USGS National Water Information System database. An assessment of the availability of historical pH, DOC, and hardness data indicated that more data were available for TOC than for DOC. A linear regression equation was developed for the relation between DOC and TOC concentrations to inform the potential use of available data to evaluate water-quality conditions at additional sites across Massachusetts where only pH, hardness, and TOC data are available. DOC and TOC concentrations were well correlated in the 223 samples in which both constituents were analyzed, and the equation had a coefficient of determination ( R 2 ) equal to 0.93.

Massachusetts↗

Conservation genomics in a changing arctic

Although logistically challenging to study, the Arctic is a bellwether for global change and is becoming a model for questions pertinent to the persistence of biodiversity. Disruption of Arctic ecosystems is accelerating, with impacts ranging from mixing of biotic communities to individual behavioral responses. Understanding these changes is crucial for conservation and sustainable economic development. Genomic approaches are providing transformative insights into biotic responses to environmental change, but have seen limited application in the Arctic due to a series of limitations. To meet the promise of genome analyses, we urge rigorous development of biorepositories from high latitudes to provide essential libraries to improve the conservation, monitoring, and management of Arctic ecosystems through genomic approaches.

Trends in Ecology and Evolution↗

Endocrine disrupting chemicals research program of the U.S. Environmental Protection Agency: summary of a peer-review report

At the request of the U.S. Environmental Protection Agency (EPA) Office of Research and Development, a subcommittee of the Board of Scientific Counselors Executive Committee conducted an independent and open peer review of the Endocrine Disrupting Chemicals Research Program (EDC Research Program) of the U.S. EPA. The subcommittee was charged with reviewing the design, relevance, progress, scientific leadership, and resources of the program. The subcommittee found that the long-term goals and science questions in the EDC Program are appropriate and represent an understandable and solid framework for setting research priorities, representing a combination of problem-driven and core research. Long-term goal (LTG) 1, dealing with the underlying science surrounding endocrine disruptors, provides a solid scientific foundation for conducting risk assessments and making risk management decisions. LTG 2, dealing with defining the extent of the impact of endocrine-disrupting chemicals (EDCs), has shown greater progress on ecologic effects of EDCs compared with that on human health effects. LTG 3, which involves support of the Endocrine Disruptor Screening and Testing Program of the U.S. EPA, has two mammalian tests already through a validation program and soon available for use. Despite good progress, we recommend that the U.S. EPA a ) strengthen their expertise in wildlife toxicology, b ) expedite validation of the Endocrine Disruptors Screening and Testing Advisory Committee tests, c ) continue dependable funding for the EDC Research Program, d ) take a leadership role in the application of “omics” technologies to address many of the science questions critical for evaluating environmental and human health effects of EDCs, and e ) continue to sponsor multidisciplinary intramural research and interagency collaborations.

Environmental Health Perspectives↗

Review and development of ASABE Engineering Practice 621: “Guidelines for calibrating, validating, and evaluating hydrologic and water quality models”

In 2010, the Natural Resources and Environmental Systems Hydrology Committee (NRES-21) of ASABE initiated a long-term process to develop guidelines to improve modeling practice through better understanding of the calibration, validation, and evaluation process across applications and more effective interpretation and communication of model performance. This effort generated a compilation of 23 articles with model-specific descriptions and guidance (2012), a position paper outlining guidance for evaluating, interpreting, and communicating performance of hydrologic and water quality models considering intended use (2014), and a compilation of ten articles addressing key topics related to model calibration and validation (2015). In 2016, the first draft of ASABE Engineering Practice 621 (EP621), “Guidelines for Calibrating, Validating, and Evaluating Hydrologic and Water Quality (H/WQ) Models,” was developed, subsequently revised, and ultimately approved by the ASABE Standards Committee in 2017. EP621 provides guidelines, not prescriptive requirements, and as such recommends “good” modeling practices to enhance calibration, validation, evaluation, and communication of H/WQ models through establishment of consistent terminology; model selection; compilation and processing of input data and calibration, validation, and evaluation data; determination of model performance measures; model parameterization and calibration; re-examination of input and calibration data and/or consideration of model refinement; re-evaluation of model performance; and documentation of modeling process and results. EP621 can be obtained from the ASABE Technical Library at https://elibrary.asabe.org/abstract.asp?aid=47804. The objectives of this technical note are to review the process and rationale used to develop EP621 and to briefly summarize its major components.

Transactions of the ASABE↗

Understanding economic and environmental tradeoffs of bottled water facilities using Structural Topic Modeling and Lexicon-based categorization of public news media

Bottled water facilities exist across the United States (U.S.) in all 50 states and have the potential to affect localities in which they are located. This study aims to understand how water bottling facilities are portrayed in news media in the U.S., focusing on economic and environmental tradeoffs, by using Natural Language Processing techniques, specifically Structural Topic Modeling and Lexicon-based Categorization, across different U.S. states and time periods. Through our stratified analysis, we identified key environmental topics and natural resources, as well as companies attracting media attention in different regions and time periods. Results suggest that: (1) the increase in news media publications were correlated with current events such as drought or the start or change in operations of bottling facilities, and (2) these current events also influenced whether the coverage focused on economic topics or environmental concerns. The balance of water availability and economic development is a theme prevalent among the results of both forms of analysis. This study demonstrates the importance of understanding the unique values of a locality before making decisions that may affect residents.

Environmental Research Communications↗

From tails to toes: developing nonlethal tissue indicators of mercury exposure in five amphibian species

Exposure to environmental contaminants has been implicated as a factor in global amphibian decline. Mercury (Hg) is a particularly widespread contaminant that biomagnifies in amphibians and can cause a suite of deleterious effects. However, monitoring contaminant exposure in amphibian tissues may conflict with conservation goals if lethal take is required. Thus, there is a need to develop non-lethal tissue sampling techniques to quantify contaminant exposure in amphibians. Some minimally invasive sampling techniques, such as toe-clipping, are common in population-genetic research, but it is unclear if these methods can adequately characterize contaminant exposure. We examined the relationships between mercury (Hg) concentrations in non-lethally sampled tissues and paired whole-bodies in five amphibian species. Specifically, we examined the utility of three different tail-clip sections from four salamander species and toe-clips from one anuran species. Both tail and toe-clips accurately predicted whole-body THg concentrations, but the relationships differed among species and the specific tail-clip section or toe that was used. Tail-clips comprised of the distal 0–2 cm segment performed the best across all salamander species, explaining between 82 and 92 % of the variation in paired whole-body THg concentrations. Toe-clips were less effective predictors of frog THg concentrations, but THg concentrations in outer rear toes accounted for up to 79 % of the variability in frog whole-body THg concentrations. These findings suggest non-lethal sampling of tails and toes has potential applications for monitoring contaminant exposure and risk in amphibians, but care must be taken to ensure consistent collection and interpretation of samples.

Ecotoxicology↗

Mapping the distribution of malaria: current approaches and future directions

Mapping the distribution of malaria has received substantial attention because the disease is a major source of illness and mortality in humans, especially in developing countries. It also has a defined temporal and spatial distribution. The distribution of malaria is most influenced by its mosquito vector, which is sensitive to extrinsic environmental factors such as rainfall and temperature. Temperature also affects the development rate of the malaria parasite in the mosquito. Here, we review the range of approaches used to model the distribution of malaria, from spatially explicit to implicit, mechanistic to correlative. Although current methods have significantly improved our understanding of the factors influencing malaria transmission, significant gaps remain, particularly in incorporating nonlinear responses to temperature and temperature variability. We highlight new methods to tackle these gaps and to integrate new data with models.

Book chapter↗

The global environmental agenda urgently needs a semantic web of knowledge

Progress in key social-ecological challenges of the global environmental agenda (e.g., climate change, biodiversity conservation, Sustainable Development Goals) is hampered by a lack of integration and synthesis of existing scientific evidence. Facing a fast-increasing volume of data, information remains compartmentalized to pre-defined scales and fields, rarely building its way up to collective knowledge. Today's distributed corpus of human intelligence, including the scientific publication system, cannot be exploited with the efficiency needed to meet current evidence synthesis challenges; computer-based intelligence could assist this task. Artificial Intelligence (AI)-based approaches underlain by semantics and machine reasoning offer a constructive way forward, but depend on greater understanding of these technologies by the science and policy communities and coordination of their use. By labelling web-based scientific information to become readable by both humans and computers, machines can search, organize, reuse, combine and synthesize information quickly and in novel ways. Modern open science infrastructure—i.e., public data and model repositories—is a useful starting point, but without shared semantics and common standards for machine actionable data and models, our collective ability to build, grow, and share a collective knowledge base will remain limited. The application of semantic and machine reasoning technologies by a broad community of scientists and decision makers will favour open synthesis to contribute and reuse knowledge and apply it toward decision making.

Environmental Evidence↗

Preliminary assessment of factors influencing riverine fish communities in Massachusetts

The U.S. Geological Survey, in cooperation with the Massachusetts Department of Conservation and Recreation (MDCR), Massachusetts Department of Environmental Protection (MDEP), and the Massachusetts Department of Fish and Game (MDFG), conducted a preliminary investigation of fish communities in small- to medium-sized Massachusetts streams. The objective of this investigation was to determine relations between fish-community characteristics and anthropogenic alteration, including flow alteration and impervious cover, relative to the effect of physical basin and land-cover (environmental) characteristics. Fish data were obtained for 756 fish-sampling sites from the Massachusetts Division of Fisheries and Wildlife fish-community database. A review of the literature was used to select a set of fish metrics responsive to flow alteration. Fish metrics tested include two fish-community metrics (fluvial-fish relative abundance and fluvial-fish species richness), and five indicator species metrics (relative abundance of brook trout, blacknose dace, fallfish, white sucker, and redfin pickerel). Streamflows were simulated for each fish-sampling site using the Sustainable Yield Estimator application (SYE). Daily streamflows and the SYE water-use database were used to determine a set of indicators of flow alteration, including percent alteration of August median flow, water-use intensity, and withdrawal and return-flow fraction. The contributing areas to the fish-sampling sites were delineated and used with a Geographic Information System (GIS) to determine a set of environmental characteristics, including elevation, basin slope, percent sand and gravel, percent wetland, and percent open water, and a set of anthropogenic-alteration variables, including impervious cover and dam density. Two analytical techniques, quantile regression and generalized linear modeling, were applied to determine the association between fish-response variables and the selected environmental and anthropogenic explanatory variables. Quantile regression indicated that flow alteration and impervious cover were negatively associated with both fluvial-fish relative abundance and fluvial-fish species richness. Three generalized linear models (GLMs) were developed to quantify the response of fish communities to multiple environmental and anthropogenic variables. Flow-alteration variables are statistically significant for the fluvial-fish relative-abundance model. Impervious cover is statistically significant for the fluvial-fish relative-abundance, fluvial-fish species richness, and brook trout relative-abundance models. The variables in the equations were demonstrated to be significant, and the variability explained by the models, as measured by the correlation between observed and predicted values, ranges from 39 to 65 percent. The GLM models indicated that, keeping all other variables the same, a one-unit (1 percent) increase in the percent depletion or percent surcharging of August median flow would result in a 0.4-percent decrease in the relative abundance (in counts per hour) of fluvial fish and that the relative abundance of fluvial fish was expected to be about 55 percent lower in net-depleted streams than in net-surcharged streams. The GLM models also indicated that a unit increase in impervious cover resulted in a 5.5-percent decrease in the relative abundance of fluvial fish and a 2.5-percent decrease in fluvial-fish species richness.

Massachusetts↗

Evaluation of carbon fluxes and trends (2000-2008) in the Greater Platte River Basin: a sustainability study on the potential biofuel feedstock development

This study evaluates the carbon fluxes and trends and examines the environmental sustainability (e.g., carbon budget, source or sink) of the potential biofuel feedstock sites identified in the Greater Platte River Basin (GPRB). A 9-year (2000–2008) time series of net ecosystem production (NEP), a measure of net carbon absorption or emission by ecosystems, was used to assess the historical trends and budgets of carbon flux for grasslands in the GPRB. The spatially averaged annual NEP (ANEP) for grassland areas that are possibly suitable for biofuel expansion (productive grasslands) was 71–169 g C m −2 year −1 during 2000–2008, indicating a carbon sink (more carbon is absorbed than released) in these areas. The spatially averaged ANEP for areas not suitable for biofuel feedstock development (less productive or degraded grasslands) was −47 to 69 g C m −2 year −1 during 2000–2008, showing a weak carbon source or a weak carbon sink (carbon emitted is nearly equal to carbon absorbed). The 9-year pre-harvest cumulative ANEP was 1166 g C m −2 for the suitable areas (a strong carbon sink) and 200 g C m −2 for the non-suitable areas (a weak carbon sink). Results demonstrate and confirm that our method of dynamic modeling of ecosystem performance can successfully identify areas desirable and sustainable for future biofuel feedstock development. This study provides useful information for land managers and decision makers to make optimal land use decisions regarding biofuel feedstock development and sustainability.

Biomass and Bioenergy↗

Water-quality monitoring strategy for Mount Hope Bay and the Taunton River Estuary, southeastern Massachusetts

The U.S. Geological Survey, in cooperation with the Massachusetts Department of Environmental Protection (MassDEP), began a study in 2018 to develop a water-quality monitoring strategy (WQMS) for Mount Hope Bay and the Taunton River Estuary in southeastern Massachusetts. MassDEP is interested in water-quality data in Mount Hope Bay and the Taunton River Estuary to characterize current water-quality conditions, assess nutrient-related effects, and capture conditions before and after planned upgrades to wastewater treatment facilities. The WQMS provides an overview of the environmental setting of Mount Hope Bay and the Taunton River Estuary and of dissolved oxygen and nutrient-related water-quality issues, reviews historical and existing monitoring data, and provides recommendations for future monitoring designed to meet five MassDEP management objectives: (1) support MassDEP’s review of coastal and marine dissolved oxygen criteria, (2) assess conditions within MassDEP waterbody assessment units in Mount Hope Bay and the Taunton River Estuary with respect to selected criteria in the Massachusetts Surface Water Quality Standards, (3) assess conditions along the freshwater/saltwater interface (salt wedge) of the Taunton River Estuary and delineate the boundary between the freshwater and saltwater waterbody assessment units, (4) estimate data requirements needed to determine nutrient loads flowing into Mount Hope Bay and the Taunton River Estuary, and (5) evaluate data requirements needed to support hydrodynamic and water-quality models for Mount Hope Bay and the Taunton River Estuary. This WQMS may be used by MassDEP to develop a statewide approach for monitoring estuaries in Massachusetts.

Massachusetts↗

Measuring environmental change in forest ecosystems by repeated soil sampling: a North American perspective

Environmental change is monitored in North America through repeated measurements of weather, stream and river flow, air and water quality, and most recently, soil properties. Some skepticism remains, however, about whether repeated soil sampling can effectively distinguish between temporal and spatial variability, and efforts to document soil change in forest ecosystems through repeated measurements are largely nascent and uncoordinated. In eastern North America, repeated soil sampling has begun to provide valuable information on environmental problems such as air pollution. This review synthesizes the current state of the science to further the development and use of soil resampling as an integral method for recording and understanding environmental change in forested settings. The origins of soil resampling reach back to the 19th century in England and Russia. The concepts and methodologies involved in forest soil resampling are reviewed and evaluated through a discussion of how temporal and spatial variability can be addressed with a variety of sampling approaches. Key resampling studies demonstrate the type of results that can be obtained through differing approaches. Ongoing, large-scale issues such as recovery from acidification, long-term N deposition, C sequestration, effects of climate change, impacts from invasive species, and the increasing intensification of soil management all warrant the use of soil resampling as an essential tool for environmental monitoring and assessment. Furthermore, with better awareness of the value of soil resampling, studies can be designed with a long-term perspective so that information can be efficiently obtained well into the future to address problems that have not yet surfaced.

Journal of Environmental Quality↗

Linking monitoring and data analysis to predictions and decisions for the range-wide eastern black rail status assessment

The US Fish and Wildlife Service has initiated a re-envisioned approach for providing decision makers with the best available science and synthesis of that information, called the Species Status Assessment (SSA), for endangered species decision making. The SSA report is a descriptive document that provides decision makers with an assessment of a species’ current status and predicted future status. These analyses support all manner of decisions under the US Endangered Species Act, such as listing, reclassification, recovery planning, etc. Novel scientific analysis and predictive modeling in SSAs could be an important part of rooting species conservation decisions in current data and cutting edge analytical and modeling techniques. Here we describe a novel analysis of available data to assess current condition of eastern black rail across its range in a dynamic occupancy analysis. We used the results of the analysis to develop a site occupancy projection model where the model parameters (initial occupancy, site persistence, colonization) were linked to environmental covariates, such as land management and land cover change (sea-level rise, development, etc.). We used the projection model to predict future conditions under multiple sea-level rise and habitat management scenarios. Occupancy probability and site colonization were low in all analysis units and site persistence was also low, suggesting low resiliency and redundancy currently. Extinction probability was high for all analysis units in all simulated scenarios except one with significant effort to preserve existing habitat, suggesting low future resiliency and redundancy. With results of these data analyses and predictive modeling, the US Fish and Wildlife Service concluded that protections of the Endangered Species Act were warranted for this subspecies.

Endangered Species Research↗