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Lateritic, supergene rare earth element (REE) deposits

Intensive lateritic weathering of bedrock under tropical or sub-tropical climatic conditions can form a variety of secondary, supergene-type deposits. These secondary deposits may range in composition from aluminous bauxites to iron and niobium, and include rare earth elements (REE). Over 250 lateritic deposits of REE are currently known and many have been important sources of REE. In southeastern China, lateritic REE deposits, known as ion-adsorption type deposits, have been the world’s largest source of heavy REE (HREE). The lateritized upper parts of carbonatite intrusions are being investigated for REE in South America, Africa, Asia and Australia, with the Mt. Weld deposit in Australia being brought into production in late 2012. Lateritic REE deposits may be derived from a wide range of primary host rocks, but all have similar laterite and enrichment profiles, and are probably formed under similar climatic conditions. The weathering profile commonly consists of a depleted zone, an enriched zone, and a partially weathered zone which overlie the protolith. Lateritic weathering may commonly extend to depths of 30 to 60 m. REE are mobilized from the breakdown of primary REE-bearing minerals and redeposited in the enriched zone deeper in the weathering horizon as secondary minerals, as colloids, or adsorbed on other secondary minerals. Enrichment of REE may range from 3 to 10 times that of the source lithology; in some instances, enrichment may range up to 100 times.

Conference Paper↗

United States streamflow probabilities and uncertainties based on anticipated El Niño, water year 2003

During the course of spring and summer 2002, tropical sea-surface temperatures in the eastern Pacific Ocean have warmed and the wind and pressure fields have shifted, so that by August, there was considerable confidence that water year (October–September) 2003 will be characterized by a weak to mild El Niño climate (http://iri.columbia.edu/climate/ENSO/currentinfo/archive/200208/QuickLook.html). At the same time, the Pacific Decadal Oscillation pattern of sea-surface temperatures in the North Pacific (Mantua et al., 1997) has shifted towards a more neutral state than in the past several years and will not be considered in detail here. Previous studies of the connections between El Niños and streamflow in the United States by the authors (e.g., Redmond and Koch, 1991; Cayan and Webb, 1992; Cayan et al., 1999; Dettinger et al., 2001) indicate that El Niño conditions influence historical streamflow distributions to varying extents. These conclusions, along with those of other researchers, suggest that foreknowledge of El Niño conditions can inform seasonal outlooks for streamflows throughout the Americas and elsewhere. For example, Dettinger et al. (2001), as distilled here into Fig. 1, showed that historical annual streamflow totals have correlated negatively with the Southern Oscillation Index (SOI, which is negatively associated with El Niños) in the U.S. Southwest as well as in the subtropics of South America, and correlate positively in the U.S. Northwest, in much of tropical South America, and, perhaps, in southernmost South America. These interhemispheric bands of El Niño influence are a matter of considerable concern for water- and land-managers throughout the Americas, and expand upon results from previous studies in the western United States (e.g., Redmond and Koch, 1991; Cayan and Webb, 1992), including a recent analysis by Pizarro and Lall (2002), where water availability and hydrologic extremes are particularly pressing issues.

Experimental Long-Lead Forecast Bulletin↗

Current and potential impacts of mosquitoes and the pathogens they vector in the Pacific region

Mosquitoes and the pathogens they transmit are ubiquitous throughout most of the temperate and tropical regions of the world. The natural and pre-European distribution and diversity of mosquitoes and mosquito-borne diseases throughout much of the Pacific region, however, depicts a depauperate and relatively benign fauna reinforcing the dream of “paradise regained”. In the central and South Pacific few mosquito species were able to colonize the remotest islands and atolls. Native mosquitoes are limited to a few far-ranging species and island endemics are typically restricted to the genera of Aedes and Culex . Only lymphatic filariasis appears to have been present as an endemic mosquito-borne disease before European contact. In nearby Australia, however, some 242 species of mosquitoes are known to occur and more than 70 arboviruses have been identified (Mackenzie 1999). In this regard Australia is more similar to the rest of the tropic and subtropical world than the smaller islands of Oceania. In our ever-shrinking world of global commerce, military activity and travel, the nature of mosquito-borne disease in the Pacific was bound to change. This paper is a brief summary of introduced mosquitoes in the Pacific and their potential impacts on human and wildlife health.

Proceedings of the Hawaiian Entomological Society↗

Current and potential ant impacts in the Pacific region

Worldwide, ants are a powerful ecological force, and they appear to be dominant components of animal communities of many tropical and temperate ecosystems in terms of biomass and numbers of individuals (Bluthgen et al. 2000). For example, ants comprise up to 94% of arthropod individuals in fogging samples taken from diverse lowland tropical rainforest canopies, and 86% of the biomass (Davidson et al. 2003). The majority of these ant species and individuals obtain carbohydrates either from extrafloral nectaries or from sap-feeding Hemiptera that pass carbohydrate-rich “honeydew” to attending ants while concentrating nitrogen (N) from N-poor plant sap (Davidson et al. 2003). Honeydew and nectar represent key resources for arboreal ant species, although most ant species are at least partly carnivorous or scavengers (Bluthgen et al. 2004). In contrast to most of the terrestrial world, the biotas of many Pacific islands evolved without ants. Whereas endemic ant species are found in New Zealand (ca. 10 spp.), Tonga (ca. 10 spp.), and Samoa (ca. 12 spp.), other islands of Polynesia and parts of Micronesia likely lack native ants (Wilson and Taylor 1967, Wetterer 2002, Wetterer and Vargo 2003). About 20 Indo-Australian and western Pacific ant species range to the east and north of Samoa, but it is unclear how many of these were transported there by humans at some time (Wilson and Taylor 1967). Most of the remainder of the ant species currently found on Pacific islands are widespread species that fall in the category of “tramp species,” dispersed by recent human commerce and generally closely tied to human activity and urban areas (Wilson and Taylor 1967, McGlynn 1999). In Pacific island situations, some of these tramp ant species are able to thrive beyond areas of human activity. Relatively few ant species have been successful invaders of native communities on continents, and these include most of the species that pose the greatest problems for Pacific islands. They generally have multiple queens per colony, are unicolonial (lacking internest aggression), quickly recruit to food items, thrive in a variety of habitats including disturbed areas, and can be highly aggressive to other ant species (McGlynn 1999). Hawaii’s arthropod fauna evolved in the absence of ants and has been observed by many biologists to be highly vulnerable to displacement by non-native ants. Pacific island biotas have also very likely suffered greatly from displacement by ants. However, in contrast to Hawaii, virtually nothing has been published on effects of non-native ants on native arthropod fauna elsewhere on Pacific islands, with the exception of the Galapagos archipelago, which may have at least four species of endemic ants (Lubin 1984, Nishida and Evenhuis 2000) and New Caledonia (Jourdan et al. 2001, Le Breton et al. 2005). In addition, many ant species in the Pacific have long been a nuisance for humans, and significant agricultural impacts have occurred from ants tending hemipteran insects of crop plants.

Proceedings of the Hawaiian Entomological Society↗

Paleo­geographic implications of molluscan assemblages in the Upper Cretaceous (Campanian) Pigeon Point Formation, California

The Pigeon Point Formation crops out along the San Mateo County coastline in a northern and southern sequence of folded and faulted strata. Correlation of the two sequences remains somewhat equivocal, although on the basis of biostratigraphy and a reversed magnetic interval both appear to have been deposited during the early to middle Campanian. Sedimentary structures suggest that the northern sequence was deposited by turbidity currents in a continental rise setting, whereas the southern sequence primarily reflects deposition in shelf and slope environments . Right-lateral offset on the San Andreas and subsidiary faults to the east of the Pigeon Point Formation can account for 100's of km of northward transport since its deposition. However, Champion and others (1984) suggested 2500 km of northward transport from a tropical setting of about 21°N. Molluscan assemblages in the formation argue strongly for a less tropical site of deposition. Relative abundances of warm and temperate taxa and the presence or absence of key species are similar to those of the Santa Ana Mountains Cretaceous section, and are indicative of a war

Book chapter↗

Wake Atoll: Evaluation of plant biosecurity

Introduced organisms can cause substantial effects across most landscapes. Island ecosystems, especially tropical islands, are at elevated risk from introduced organisms. The risks are even higher for tropical islands with moderate or high levels of transit, yet this can be minimized by application of appropriate biosecurity requirements. In this study, we examined the potential for non-native plant species introductions, especially invasive plants, via shipping containers to be transported to Wake Atoll, one of the most remote terrestrial land masses in the Pacific Ocean. We sowed debris collected from 30 shipping containers in a greenhouse experiment to determine if any live plants could be germinated, identify any species that germinated, and ascertain if they posed a threat if they were to be transported to Wake Atoll and became established there. During this study 23 plant species were identified, including ferns, monocots, and dicots. Fifteen of these species reached reproductive maturity over the course of seven months. From previous plant surveys on the atoll, we know that 13 of the 23 identified species were not previously recorded, and four species are already known to be invasive on Wake Atoll. This study provides insight into the potential for debris found in shipping containers to contribute to the spread of non-native, possibly invasive species. This information may help with the refinement of biosecurity strategies to prevent the accidental introduction of invasive species into sensitive natural areas such as Wake Atoll.

Hawaii Cooperative Studies Unit Technical Report↗

Diseases of amphibian eggs and embryos

Amphibians generally are prolific egg producers. In tropical and semi-tropical regions, deposition of eggs may occur year-round or may coincide with rainy seasons, while in temperate regions, deposition of eggs usually occurs immediately after emergence from hibernation. Numbers of eggs produced by each species may vary from a few dozen to thousands. Accordingly, some eggs may be infertile and wastage of embryos is to be expected. Fertility, viability and decomposition of eggs and embryos must be considered before it is assumed that diseases are present. An important consideration in the evaluation of egg masses is the fact that some will contain infertile and non-viable eggs. These infertile and nonviable eggs will undergo decomposition and they may appear similar to eggs that are infected by a pathogen. Evaluation of egg masses and embryos for the presence of disease may require repeated observations in a given breeding season as well as continued monitoring of egg masses during their growth and development and over successive breeding seasons. Amphibian eggs rarely are subjected to a comprehensive health (diagnostic) examination; hence, there is scant literature on the diseases of this life stage. Indeed, the eggs of some North American amphibians have yet to be described. Much basic physiology and normal biomedical baseline data on amphibian eggs is lacking. For example, it is known that the aquatic eggs of some species of shrimp quickly are coated by a protective and commensal bacterium that effectively impedes invasion of the eggs by other environmental organisms and potential pathogens. In the absence of this bacterium, shrimp eggs are rapidly killed by other bacteria and fungi (Green, 2001). The possibility that amphibian eggs also have important symbiotic or commensal bacteria needs to be investigated. Furthermore, the quantity and types of chemicals in the normal gelatinous capsules of amphibian eggs have scarcely been examined. Abnormalities of the female oviduct, either due to infectious disease, nutritional status, hormonal imbalances, or sublethal intoxications, could affect the quality of secreted gelatinous capsules on eggs, thus rendering an egg mass susceptible to other stressors. Diseases of amphibian eggs and embryos presented in this chapter are Lucke frog herpesvirus Ranavirus (iridovirus) infection Bacteria Watermold infection (saprolegniasis) Algae Microsporidia

Book chapter↗

Corridor- and stopover-use of the Hawaiian goose ( Branta sandvicensis ), an intratropical altitudinal migrant

We outfitted six male Hawaiian geese, or nene (Branta sandvicensis), with 45-g solar-powered satellite transmitters and collected four location coordinates d −1 from 2010 to 2012. We used 6193 coordinates to characterize migration corridors, habitat preferences and temporal patterns of displacement for 16 migration events with Brownian bridge utilization distributions (BBUD). We used 1552 coordinates to characterize stopovers from 37 shorter-distance movement events with 25% BBUDs. Two subpopulations used a well-defined common migration corridor spanning a broad gradient of elevation. Use of native-dominated subalpine shrubland was 2.81 times more likely than the availability of this land-cover type. The nene differed from other tropical and temperate-zone migrant birds in that: (1) migration distance and the number of stopovers were unrelated (Mann–Whitney test W = 241, P < 0.006), and; (2) individual movements were not unidirectional suggesting that social interactions may be more important than refuelling en route; but like other species, nene made more direct migrations with fewer stopovers in return to breeding areas (0.58 ± 0.50) than in migration away from breeding areas (1.64 ± 0.48). Our findings, combined with the direction and timing of migration, which is opposite that of most other intratropical migrants, suggest fundamentally different drivers of altitudinal migration.

Journal of Tropical Ecology↗

Protection of bats (Eptesicus fuscus) against rabies following topical or oronasal exposure to a recombinant raccoon poxvirus vaccine

Rabies is an ancient neglected tropical disease that causes tens of thousands of human deaths and millions of cattle deaths annually. In order to develop a new vaccine for potential use in bats, a reservoir of rabies infection for humans and animals alike, an in silico antigen designer tool was used to create a mosaic glycoprotein (MoG) gene using available sequences from the rabies Phylogroup I glycoprotein. This sequence, which represents strains more likely to occur in bats, was cloned into raccoonpox virus (RCN) and the efficacy of this novel RCN-MoG vaccine was compared to RCN-G that expresses the glycoprotein gene from CVS-11 rabies or luciferase (RCN- luc , negative control) in mice and big brown bats ( Eptesicus fuscus ). Mice vaccinated and boosted intradermally with 1 x 10 7 plaque forming units (PFU) of each RCN-rabies vaccine construct developed neutralizing antibodies and survived at significantly higher rates than controls. No significant difference in antibody titers or survival was noted between rabies-vaccinated groups. Bats were vaccinated either oronasally (RCN-G, RCN-MoG) with 5x10 7 PFU or by topical application in glycerin jelly (RCN-MoG, dose 2x10 8 PFU), boosted (same dose and route) at 46 days post vaccination (dpv), and then challenged with wild-type big brown variant RABV at 65 dpv. Prior to challenge, 90% of RCN-G and 75% of RCN-MoG oronasally vaccinated bats had detectable levels of serum rabies neutralizing antibodies. Bats from the RCN- luc and topically vaccinated RCN-MoG groups did not have measurable antibody responses. The RCN-rabies constructs were highly protective and not significantly different from each other. RCN-MoG provided 100% protection (n = 9) when delivered oronasally and 83% protection (n = 6) when delivered topically; protection provided by the RCN-G construct was 70% (n = 10). All rabies-vaccinated bats survived at a significantly (P ≤ 0.02) higher rate than control bats (12%; n = 8). We have demonstrated the efficacy of a novel, in silico designed rabies MoG antigen that conferred protection from rabies challenge in mice and big brown bats in laboratory studies. With further development, topical or oronasal administration of the RCN-MoG vaccine could potentially mitigate rabies in wild bat populations, reducing spillover of this deadly disease into humans, domestic mammals, and other wildlife.

PLoS Neglected Tropical Diseases↗

Prevalence of West Nile virus in migratory birds during spring and fall migration

To investigate the role of migratory birds in the dissemination of West Nile virus (WNV), we measured the prevalence of infectious WNV and specific WNV neutralizing antibodies in birds, principally Passeriformes, during spring and fall migrations in the Atlantic and Mississippi flyways from 2001-2003. Blood samples were obtained from 13,403 birds, representing 133 species. Specific WNV neutralizing antibody was detected in 254 resident and migratory birds, representing 39 species, and was most commonly detected in northern cardinals (Cardinalis cardinalis) (9.8%, N = 762) and gray catbirds (Dumetella carolinensis) (3.2%,N = 3188). West Nile virus viremias were detected in 19 birds, including 8 gray catbirds, and only during the fall migratory period. These results provide additional evidence that migratory birds may have been a principal agent for the spread of WNV in North America and provide data on the occurrence of WNV in a variety of bird species. Copyright ?? 2009 by The American Society of Tropical Medicine and Hygiene.

American Journal of Tropical Medicine and Hygiene↗

Experimental infection of cliff swallows (Petrochelidon pyrrhonota) with varying doses of West Nile virus

Cliff swallows (Petrochelidon pyrrhonota) were inoculated with differing doses of West Nile virus (WNV) to evaluate their potential role as reservoir hosts in nature. Swallows often nest in large colonies in habitats and months associated with high mosquito abundance and early WNV transmission in North America. Additionally, cliff swallow diet consists of insects, including mosquitoes, leading to an additional potential route of WNV infection. The average peak viremia titer among infected cliff swallows was 10 6.3 plaque-forming units (PFU)/mL serum and the reservoir competence index was 0.34. There was no correlation between dose and probability of becoming infected or viremia peak and duration. Oral shedding was detected from 2 to 14 days post-inoculation with an average peak titer of 10 44 PFU/swab. These results suggest that cliff swallows are competent reservoir hosts of WNV and therefore, they may play a role in early seasonal amplification and maintenance of WNV. Copyright ?? 2009 by The American Society of Tropical Medicine and Hygiene.

American Journal of Tropical Medicine and Hygiene↗

Rift Valley fever virus infection in African Buffalo (Syncerus caffer) herds in rural South Africa: Evidence of interepidemic transmission

Rift Valley fever virus (RVFV) is an emerging biodefense pathogen that poses significant threats to human and livestock health. To date, the interepidemic reservoirs of RVFV are not well defined. In a longitudinal survey of infectious diseases among African buffalo during 2000-2006, 550 buffalo were tested for antibodies against RVFV in 820 capture events in 302 georeferenced locations in Kruger National Park, South Africa. Overall, 115 buffalo (21%) were seropositive. Seroprevalence of RVFV was highest (32%) in the first study year, and decreased progressively in subsequent years, but had no detectable impact on survival. Nine (7%) of 126 resampled, initially seronegative animals seroconverted during periods outside any reported regional RVFV outbreaks. Seroconversions for RVFV were detected in significant temporal clusters during 2001-2003 and in 2004. These findings highlight the potential importance of wildlife as reservoirs for RVFV and interepidemic RVFV transmission in perpetuating regional RVFV transmission risk. Copyright ?? 2011 by The American Society of Tropical Medicine and Hygiene.

American Journal of Tropical Medicine and Hygiene↗

How wide is a road? The association of roads and mass-wasting in a forested montane environment

A spatial data base of 1609 landslides was analysed using a geographic information system to determine landslide frequency in relation to highways. A 126 km long transportation network in a 201km2 area of humid-tropical, mountainous, forested terrain in Puerto Rico was used in conjunction with a series of 20 buffer (disturbance) zones varying from 5 to 400m in length, measured perpendicular to the highways. Average landslide frequency in the study area at distances greater than 85m from roads was about six landslides per square kilometre. At distances of 85m or less on either side of a highway, landslide frequency was about 30 landslides per square kilometre. On average, this elevated disturbance rate affected 330m2km-2a-1 within the 170m swath. The mass-wasting rate outside of the disturbance zone affected 40m2km-2 a-1. These results indicate that the rate of mass-wasting disturbance is increased from five to eight times in a 170m wide swath along road corridors. The lateral extent of the environmental impact of roads in the study area is greater than is commonly perceived. The approach described herein demonstrates a simple method to assess the spatial association of mass-wasting with highways. ?? 1997 by John Wiley & Sons, Ltd.

Earth Surface Processes and Landforms↗

Disruptions of El Niño–Southern Oscillation teleconnections by the Madden–Julian Oscillation

The El Ni&ntilde;o&ndash;Southern Oscillation (ENSO) is the leading mode of interannual variability, with global impacts on weather and climate that have seasonal predictability. Research on the link between interannual ENSO variability and the leading mode of intraseasonal variability, the Madden&ndash;Julian oscillation (MJO), has focused mainly on the role of MJO initiating or terminating ENSO. We use observational analysis and modeling to show that the MJO has an important simultaneous link to ENSO: strong MJO activity significantly weakens the atmospheric branch of ENSO. For weak MJO conditions relative to strong MJO conditions, the average magnitude of ENSO-associated tropical precipitation anomalies increases by 63%, and the strength of hemispheric teleconnections increases by 58%. Since the MJO has predictability beyond three weeks, the relationships shown here suggest that there may be subseasonal predictability of the ENSO teleconnections to continental circulation and precipitation.

Geophysical Research Letters↗

Agricultural conversion without external water and nutrient inputs reduces terrestrial vegetation productivity

Driven by global population and standard of living increases, humanity co-opts a growing share of the planet's natural resources resulting in many well-known environmental trade-offs. In this study, we explored the impact of agriculture on a resource fundamental to life on Earth: terrestrial vegetation growth (net primary production; NPP). We demonstrate that agricultural conversion has reduced terrestrial NPP by ~7.0%. Increases in NPP due to agricultural conversion were observed only in areas receiving external inputs (i.e., irrigation and/or fertilization). NPP reductions were found for ~88% of agricultural lands, with the largest reductions observed in areas formerly occupied by tropical forests and savannas (~71% and ~66% reductions, respectively). Without policies that explicitly consider the impact of agricultural conversion on primary production, future demand-driven increases in agricultural output will likely continue to drive net declines in global terrestrial productivity, with potential detrimental consequences for net ecosystem carbon storage and subsequent climate warming.

Geophysical Research Letters↗

The birth and death of transverse aeolian ridges on Mars

Transverse aeolian ridges (TARs) are small bright windblown deposits found throughout the Martian tropics that stand a few meters tall and are spaced a few tens of meters apart. The origin of these features remains mysterious more than 20 years after their discovery on Mars. This paper presents a new hypothesis, that some of the TARs could be indurated dust deposits emplaced millions of years ago during periods of higher axial obliquity. It suggests that these TARs are primary depositional bed forms that accumulated in place from dust carried by the winds in suspension, perhaps in a manner comparable to antidunes on Earth, and were subsequently indurated and eroded to their current states by eons of sandblasting. It points out examples of modern dust drifts and dune‐like features that appear to have been recently formed by dust accumulating directly onto the surface from atmospheric suspension. It shows how these pristine dust deposits could evolve to explain the range of morphologies of the TARs. Finally, it explains how the known properties of many TARs are consistent with this hypothesis, including their composition, thermal behavior, and distribution.

Journal of Geophysical Research E: Planets↗

Multisensor earth observations to characterize wetlands and malaria epidemiology in Ethiopia

Malaria is a major global public health problem, particularly in Sub-Saharan Africa. The spatial heterogeneity of malaria can be affected by factors such as hydrological processes, physiography, and land cover patterns. Tropical wetlands, for example, are important hydrological features that can serve as mosquito breeding habitats. Mapping and monitoring of wetlands using satellite remote sensing can thus help to target interventions aimed at reducing malaria transmission. The objective of this study was to map wetlands and other major land cover types in the Amhara region of Ethiopia and to analyze district-level associations of malaria and wetlands across the region. We evaluated three random forests classification models using remotely sensed topographic and spectral data based on Shuttle Radar Topographic Mission (SRTM) and Landsat TM/ETM+ imagery, respectively. The model that integrated data from both sensors yielded more accurate land cover classification than single-sensor models. The resulting map of wetlands and other major land cover classes had an overall accuracy of 93.5%. Topographic indices and subpixel level fractional cover indices contributed most strongly to the land cover classification. Further, we found strong spatial associations of percent area of wetlands with malaria cases at the district level across the dry, wet, and fall seasons. Overall, our study provided the most extensive map of wetlands for the Amhara region and documented spatiotemporal associations of wetlands and malaria risk at a broad regional level. These findings can assist public health personnel in developing strategies to effectively control and eliminate malaria in the region.

Amhara region↗

Dynamic simulation and numerical analysis of hurricane storm surge under sea level rise with geomorphologic changes along the northern Gulf of Mexico

This work outlines a dynamic modeling framework to examine the effects of global climate change, and sea level rise (SLR) in particular, on tropical cyclone-driven storm surge inundation. The methodology, applied across the northern Gulf of Mexico, adapts a present day large-domain, high resolution, tide, wind-wave, and hurricane storm surge model to characterize the potential outlook of the coastal landscape under four SLR scenarios for the year 2100. The modifications include shoreline and barrier island morphology, marsh migration, and land use land cover change. Hydrodynamics of 10 historic hurricanes were simulated through each of the five model configurations (present day and four SLR scenarios). Under SLR, the total inundated land area increased by 87% and developed and agricultural lands by 138% and 189%, respectively. Peak surge increased by as much as 1&thinsp;m above the applied SLR in some areas, and other regions were subject to a reduction in peak surge, with respect to the applied SLR, indicating a nonlinear response. Analysis of time-series water surface elevation suggests the interaction between SLR and storm surge is nonlinear in time; SLR increased the time of inundation and caused an earlier arrival of the peak surge, which cannot be addressed using a static (&ldquo;bathtub&rdquo;) modeling framework. This work supports the paradigm shift to using a dynamic modeling framework to examine the effects of global climate change on coastal inundation. The outcomes have broad implications and ultimately support a better holistic understanding of the coastal system and aid restoration and long-term coastal sustainability.

Earth's Future↗