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At least 667 records · Page 37Linked to original sources

A new species of tree hyrax (Procaviidae: Dendrohyrax) from West Africa and the significance of the Niger–Volta interfluvium in mammalian biogeography

Tree hyraxes ( Dendrohyrax ) are one of only three genera currently recognized in Procaviidae, the only extant family in the mammalian order Hyracoidea. Their taxonomy and natural history have received little attention in recent decades. All tree hyrax populations of Guineo-Congolian forests of Africa are currently treated as a single species, Dendrohyrax dorsalis , the western tree hyrax, but many other groups of mammals distributed across this large biome have been shown to consist of several different species, each restricted to a distinct biogeographical region. We analysed variation in loud-call structure, pelage colour, skull morphometrics and mitochondrial genomes in populations across much of the range of D. dorsalis . This integrative approach uncovered considerable cryptic variation. The population found between the Niger and Volta Rivers in West Africa is particularly distinctive, and we describe it herein as a new species. Our study highlights the need to revise the taxonomy of the genus Dendrohyrax in light of modern systematics and current understanding of its distribution. It also adds to a growing body of evidence that the Niger–Volta interfluvium has a distinct meso-mammal fauna. Unfortunately, the fauna of this region is under major threat and warrants much greater conservation attention.

Zoological Journal of the Linnean Society↗

Effects of land-use changes and stormflow-detention basins on flooding and nonpoint-source pollution, in Irondequoit Creek basin, Monroe and Ontario counties, New York--application of a precipitation-runoff model

Urbanization of the 150-square-mile Irondequoit Creek basin in Monroe and Ontario Counties, N.Y., continues to spread southward and eastward from the City of Rochester, on the shore of Lake Ontario. Conversion of forested land to other uses over the past 40 years has increased to the extent that more than 50 percent of the basin is now developed. This expansion has increased flooding and impaired stream-water quality in the northern (downstream) half of the basin. A precipitation-runoff model of the Irondequoit Creek basin was developed with the model code HSPF (Hydrological Simulation Program--FORTRAN) to simulate the effects of land-use changes and stormflow-detention basins on flooding and nonpoint-source pollution on the basin. Model performance was evaluated through a combination of graphical comparisons and statistical tests, and indicated 'very good' agreement (mean error less than 10 percent) between observed and simulated daily and monthly streamflows, between observed and simulated monthly water temperatures, and between observed total suspended solids loads and simulated sediment loads. Agreement between monthly observed and simulated nutrient loads was 'very good' (mean error less than 15 percent) or 'good' (mean error between 15 and 25 percent). Results of model simulations indicated that peak flows and loads of sediment and total phosphorus would increase in a rural subbasin, where 10 percent of the basin was converted from forest and grassland to pervious and impervious developed areas. Subsequent simulation of a stormflow-detention basin at the mouth of this subbasin indicated that peak flows and constituent loads would decrease below those that were generated by the land-use-change scenario, and, in some cases, below those that were simulated by the original land-use scenario. Other results from model simulations of peak flows over a 30-year period (1970-2000), with and without simulation of 50-percent flow reductions at one existing and nine hypothetical stormflow-detention basins, indicated that stormflow-detention basins would likely decrease peak flows 14 to 17 percent on Allen Creek and 17 to 18 percent on Irondequoit Creek at Blossom Road. The model is intended as a management tool that water-resource managers can use to guide decisions regarding future development in the basin. The model and associated files are designed to permit (1) creation of scenarios that represent planned or hypothetical development in the basin, and (2) assessment of the flooding and chemical loads that are likely to result. Instream stormflow-detention basins can be simulated in separate scenarios to assess their effect on flooding and chemical loads. This report (1) provides examples of how the model can be applied to address these issues, (2) discusses the model revisions required to simulate land-use changes and detention basins, and (3) describes the analytical steps necessary to evaluate the model results.

Scientific Investigations Report↗

Forest conditions in the Black Mesa Forest Reserve, Arizona

The Black Mesa Forest Reserve, in Arizona, was created by proclamation of President McKinley dated August 17, 1898. The following are its boundaries; "Beginning at a point on the boundary line between Arizona and New Mexico where it is intersected by the north line of township seven (7) north, range thirty-one (31) east, Gila and Salt River meridian, Arizona; thence westerly along the township line to the southeast corner of township eight (8) north, range twenty-seven (27) east; thence northerly to the northeast corner of said township; thence westerly along the second (2nd) standard parallel north to the southeast corner of township nine (9) north, range twenty-six (26) east; thence northerly to the northeast corner of said township; thence westerly along the township line to the southeast corner of township ten (10) north, range twenty-two (22) east; thence northerly to the northeast corner of said township; thence westerly along the township line to the southeast corner of township eleven (11) north, range nineteen (19) east; thence northerly.along the range line to its point of intersection with the forty miles limit of the grant to the Atlantic and Pacific Railroad Company; thence westerly following the forty miles limit of said grant to its intersection with the range line between ranges five (5) and six (6) east, in township fifteen (15) north; thence southerly to the southwest corner of said township; thence easterly along the township line to the northwest corner of township fourteen (14) north, range seven (7) east; thence southerly along the range line to the southwest corner of township thirteen (13) north, range seven (7) east; thence easterly along the third (3rd) standard parallel north to the northwest corner of township twelve (12) north, range eight (8) east; thence southerly to the south- west corner of said township; thence easterly along the township line to the north- west corner of township eleven (11) north, range twelve (12) east; thence southerly to the southwest corner of said township; thence easterly to the northwest corner of the White Mountain Indian Reservation; thence in a general easterly, southeasterly, and southerly direction along the northern and eastern boundaries of said reservation to its intersection with the Gila and Salt River base line; thence easterly along said base line to its intersection with the boundary line between Arizona and New Mexico; thence northerly along said boundary line to the point where it intersects the north line of township seven (7) north, range thirty-one (31) east, the place of beginning."

Arizona↗

Influence of land use and open-water wetlands on water quality in the Lake Wallenpaupack basin, northeastern Pennsylvania

The recreational value of Lake Wallenpaupack, along with its proximity to the New York and New Jersey metropolitan areas, has resulted in residential development in parts of the watershed. Some of these developments encroach on existing ponds, lakes, and wetlands and result in the conversion of forest land to residential areas. Sediment and nutrients in runoff from these residential areas, and inputs from agricultural areas, sewage treatment plants, and atmospheric deposition, have had a significant effect on water quality in Lake Wallenpaupack. Water-quality data collected in the Lake Wallenpaupack watershed from 1991 through 1994 indicate the influence of land use on water resources. Water samples collected from a forested undeveloped basin contained lower concentrations of suspended sediment, nitrogen, and total phosphorus than samples collected from the basins of Ariel Creek and Purdy Creek that drain areas having mixed land use with residential developments. Sediment yields were three to four times higher in the developed basins of Purdy and Ariel Creeks compared to the forested undeveloped basin. Annual yields for total nitrogen for Ariel Creek and Purdy Creek were between three to five times greater than yields from the forested basin. For the 1993 water year, the annual yield for dissolved nitrate plus nitrite (as nitrogen) from Ariel Creek Basin was 1,410 pounds per square mile, or about 60 times greater than the 24 pounds per square mile from the undeveloped basin. The total-phosphorus yield from the Ariel Creek Basin was 216 pounds per square mile for the 1994 water year. This was about three times greater than the 74 pounds per square mile from the forested basin. The total-phosphorus yield for the Purdy Creek Basin was 188 pounds per square mile for the 1994 water year, or 2.5 times greater than the yield from the undeveloped forested basin. Only slight differences were observed in dissolved orthophosphate phosphorus loadings between the basins. All three basins displayed seasonal differences in water quality. Most of the annual yield occurred during early spring as a result of snowmelt runoff. Data collected from the Stevens Creek sites showed that an open-water wetland was very effective in removing sediment and total phosphorus but was not as effective in removing dissolved orthophosphate phosphorus and nitrogen. The wetland removed more than 96 percent of the sediment.

Water-Resources Investigations Report↗

Classification of lakebed geologic substrate in autonomously collected benthic imagery using machine learning

Mapping benthic habitats with bathymetric, acoustic, and spectral data requires georeferenced ground-truth information about habitat types and characteristics. New technologies like autonomous underwater vehicles (AUVs) collect tens of thousands of images per mission making image-based ground truthing particularly attractive. Two types of machine learning (ML) models, random forest (RF) and deep neural network (DNN), were tested to determine whether ML models could serve as an accurate substitute for manual classification of AUV images for substrate type interpretation. RF models were trained to predict substrate class as a function of texture, edge, and intensity metrics (i.e., features) calculated for each image. Models were tested using a manually classified image dataset with 9-, 6-, and 2-class schemes based on the Coastal and Marine Ecological Classification Standard (CMECS). Results suggest that both RF and DNN models achieve comparable accuracies, with the 9-class models being least accurate (~73–78%) and the 2-class models being the most accurate (~95–96%). However, the DNN models were more efficient to train and apply because they did not require feature estimation before training or classification. Integrating ML models into benthic habitat mapping process can improve our ability to efficiently and accurately ground-truth large areas of benthic habitat using AUV or similar images.

Michigan, Wisconsin↗

Golden-winged Warbler nest-site habitat selection: Chapter 7

Avian habitat selection occurs at multiple spatial scales to incorporate life history requirements. Breeding habitat of Golden-winged Warblers ( Vermivora chrysoptera ) is characterized by largely forested landscapes containing natural or anthropogenic disturbance elements that maintain forest patches in early stages of succession. Breeding habitat occurs in a variety of settings, including shrub and forest swamps, regenerating forests following timber harvest, grazed pastures, and reclaimed mined lands. We identified structural components of nest sites for Golden-winged Warblers by measuring habitat characteristics across five states (North Carolina, New York, Pennsylvania, Tennessee, and West Virginia) in the Appalachian breeding-distribution segment and two states (Minnesota and Wisconsin) in the Great Lakes breeding-distribution segment. We measured habitat characteristics at the nest-site scale with a series of nested plots characterizing herbaceous vegetation (grasses and forbs), woody shrubs and saplings, and overstory trees. We measured similar variables at paired random plots located 25–50 m from the nest within the same territory to evaluate selection. We used conditional logistical regression to identify which parameters were important in habitat selection and Simple Saddlepoint Approximation (SSA) to aid in management interpretation of identified parameters for each study site. Study site was an important determinant for which parameters were significant in nest-site selection, although selection for some parameters was consistent across sites. The amount of woody cover at the nest-site scale was consistently present in the top nest-site selection models across sites, although the direction of the relationship was not the same across all sites. We also identified grass, forb, woody cover, and vegetation density as important components of Golden-winged Warbler nest-site selection. Based on SSA, we identified vegetation thresholds to aid in designing habitat management prescriptions to promote creation or restoration of Golden-winged Warbler nesting habitat across the eastern portion of their breeding distribution.

Studies in Avian Biology↗

Hemlock ecosystem monitoring of New River Gorge National River and Gauley River National Recreation Area vegetation and bird communities: 1998–2008

We initiated a long-term hemlock ecosystem monitoring study in 1998 on the New River Gorge National River (NERI) and Gauley River National Recreation Area (GARI), in Nicholas, Fayette, and Raleigh counties, West Virginia, to quantify the effects of hemlock woolly adelgid (HWA) on forest ecosystem dynamics. Hemlock vigor and degree of adelgid infestation were sampled in each fall 1998 through 2007 except 1999 and 2005; vegetation structure and composition were sampled in summer 1999 and 2007; and avian populations were sampled each summer 1999 through 2008. HWA was first detected on sampling plots in 2004 when it was found on eight of 36 plots and reached a high of 22 plots in 2006. Although hemlock crown vigor has declined, limited hemlock mortality has occurred. Consequently, vegetation structure and bird communities have changed little. However, because the literature suggests that tree mortality can occur within four to six years of infestation, we expect hemlock mortality to ensue.

West Virginia↗

The Factors Affecting Female Black Bear Harvest Rates in Pennsylvania

Pennsylvania’s black bear ( Ursus americanus ) population increased in abundance and distribution during the latter third of the 20th century, leading to an increase in human-bear conflicts. Increases in harvest opportunities from 2002–2018 aimed to stabilize black bear population growth but did not substantially increase harvest, and annual harvest was often below the desired goal of 20% removal. Consequently, additional changes to Pennsylvania’s black bear hunting seasons occurred from 2019–2021, including starting harvest earlier, expanding the length of seasons, and adding additional seasons (i.e., a muzzleloader and special rifle season). Understanding how earlier harvest seasons and new methods of take (i.e., muzzleloader) influence female black bear harvest vulnerability is important to informing harvest management. We trapped and GPS-collared adult female bears in the Sproul State Forest in northcentral Pennsylvania from 2019–2021 to determine home range sizes, patterns of resource selection, and sources of mortality during fall harvest seasons. We assessed annual variability in relative abundance of fall hard mast. We evaluated temporal and spatial variation in hunter activity with road-side surveys and remote camera traps, respectively. We estimated fall and weekly home range size with utilization distributions through an autocorrelated kernel density estimation and evaluated the influence of predictors hypothesized to influence third-order resource selection using generalized linear mixed models. We investigated factors hypothesized to influence female black bear survival during hunting seasons with known-fate models. Mean fall home range size was 248.7 km 2 (range = 6.1–2636.1 km 2 ). Home range sizes varied by year and were generally smaller during archery harvest season than other periods. Patterns of weekly resource selection indicated bears selected steeper slopes and higher elevations outside of harvest seasons but shifted to less-steep areas in the week before harvest and the first week of harvest, and to lower elevations during harvest. Bears selected for areas containing oak ( Quercus spp.) trees throughout the fall. Survival was lower in older age bears, greater relative mast abundance conditions, steeper slopes, and areas of greater hunter space use during the general firearms season. Survival was higher in areas of greater hunter space use during archery season. Harvest rate of adult female bears was 0.345 in 2019, 0.321 in 2020, and 0.150 in 2021, and averaged 0.272 across all three years. The probability of an adult female black bear surviving all harvest seasons each year was 0.611 (SE = 0.086, 95% CI = 0.436, 0.761). The high harvest rate and low predicted survival may lead to population reduction.

Pennsylvania↗

Avifaunal responses to fire in southwestern montane forests along a burn severity gradient

The effects of burn severity on avian communities are poorly understood, yet this information is crucial to fire management programs. To quantify avian response patterns along a burn severity gradient, we sampled 49 random plots (2001-2002) at the 17 351-ha Cerro Grande Fire (2000) in New Mexico, USA. Additionally, pre-fire avian surveys (1986-1988, 1990) created a unique opportunity to quantify avifaunal changes in 13 pre-fire transects (resampled in 2002) and to compare two designs for analyzing the effects of unplanned disturbances: after-only analysis and before-after comparisons. Distance analysis was used to calculate densities. We analyzed after-only densities for 21 species using gradient analysis, which detected a broad range of responses to increasing burn severity: (I) large significant declines, (II) weak, but significant declines, (III) no significant density changes, (IV) peak densities in low- or moderate-severity patches, (V) weak, but significant increases, and (VI) large significant increases. Overall, 71% of the species included in the after-only gradient analysis exhibited either positive or neutral density responses to fire effects across all or portions of the severity gradient (responses III-VI). We used pre/post pairs analysis to quantify density changes for 15 species using before-after comparisons; spatiotemporal variation in densities was large and confounded fire effects for most species. Only four species demonstrated significant effects of burn severity, and their densities were all higher in burned compared to unburned forests. Pre- and post-fire community similarity was high except in high-severity areas. Species richness was similar pre- and post-fire across all burn severities. Thus, ecosystem restoration programs based on the assumption that recent severe fires in Southwestern ponderosa pine forests have overriding negative ecological effects are not supported by our study of post-fire avian communities. This study illustrates the importance of quantifying burn severity and controlling confounding sources of spatiotemporal variation in studies of fire effects. After-only gradient analysis can be an efficient tool for quantifying fire effects. This analysis can also augment historical data sets that have small samples sizes coupled with high non-process variation, which limits the power of before-after comparisons. ?? 2007 by the Ecological Society of America.

Ecological Applications↗

A new remote sensing-based Carbon Sequestration Potential Index (CSPI): A tool to support land carbon management

Integrating remote sensing into assessments of carbon stocks and fluxes has advanced our understanding of how global change affects landscapes and our capacity to support decision making about forest management. However, there remains a lack of detailed and actionable analyses conducted across widely ranging environmental conditions that are appropriate for tactical planning. We used airborne laser scanning data and multi-source satellite imagery to estimate forest aboveground carbon density and gross primary production, and to map forest cover across the main Hawaiian Islands. We used these measures to develop the Carbon Sequestration Potential Index (CSPI), which identifies where the potential for carbon sequestration following afforestation would be highest within a complex landscape of 304 management units. Variation in CSPI was high across islands and between ecosystems, with low values for cool, dry and largely intact forest systems and high values for warm, wet and largely non-forested systems. The CSPI provided a rapid, spatially-explicit and actionable assessment of Hawaiian forest reserves, which can help stewardship agencies contribute to state carbon neutrality goals through climate-smart and science-driven prescriptions that encompass conservation to restoration.

Hawaii↗

Assessment of total nitrogen in the upper Connecticut River basin in New Hampshire, Vermont, and Massachusetts, December 2002–September 2005

A study of total nitrogen concentrations and loads was conducted from December 2002 to September 2005 at 13 river sites in the upper Connecticut River Basin. Ten sites were selected to represent contributions of nitrogen from forested, agricultural, and urban land. Three sites were distributed spatially on the main stem of the Connecticut River to assess the cumulative total nitrogen loads. To further improve the understanding of the sources and concentrations and loads of total nitrogen in the upper Connecticut River Basin, ambient surface water-quality sampling was supplemented with sampling of effluent from 19 municipal and paper mill wastewater-treatment facilities. Mean concentrations of total nitrogen ranged from 0.19 to 2.8 milligrams per liter (mg/L) at river sampling sites. Instantaneous mean loads of total nitrogen ranged from 162 to 58,300 pounds per day (lb/d). Estimated mean annual loads of total nitrogen ranged from 49,100 to 21.6 million pounds per year (lb/yr) with about 30 to 55 percent of the loads being transported during the spring. The estimated mean annual yields of total nitrogen ranged from 1,190 to 7,300 pounds per square mile per year (lb/mi 2 )/yr. Mean concentrations of total nitrogen ranged from 4.4 to 30 mg/L at wastewater-treatment sampling sites. Instantaneous mean loads of total nitrogen from municipal wastewater-treatment facilities ranged from 36 to 1,780 lb/d. Instantaneous mean loads of total nitrogen from paper mill wastewater-treatment facilities ranged from 96 to 160 lb/d. The median concentration of total nitrogen was 0.24 mg/L at forested sites, 0.48 mg/L at agricultural sites, 0.54 mg/L at urban sites, 0.48 mg/L at main-stem sites, and 14 mg/L at wastewater-treatment sites. Concentrations of total nitrogen at forested sites were significantly less than at all other site types (p<0.05). Concentrations of total nitrogen at agricultural, urban, and main stem sites were not significantly different among each other (p>0.05) but were significantly greater (p<0.05) than at forested sites and significantly less than concentrations at wastewater-treatment sites (p<0.05). Total nitrogen concentrations at wastewater-treatment sites were significantly different from all other site types (p<0.05). Annual yields of total nitrogen ranged from 732 to 1,920 (lb/mi 2 )/yr at forested sites; 1,550 to 2,980 (lb/mi 2 )/yr at agricultural sites; 1,280 to 1,860 (lb/mi 2 )/yr at urban sites that were not directly affected by wastewater effluent; 7,090 to 7,770 (lb/mi 2 )/yr at an urban site directly affected by wastewater effluent; and 1,300 to 2,390 (lb/mi 2 )/yr at main-stem sites. In this study, the mean annual load and yield of total nitrogen at the Connecticut River at Wells River, VT, was estimated at 4.47 million lb/yr and 1,690 (lb/mi 2 )/yr, respectively. The mean annual load and yield of total nitrogen at the Connecticut River at North Walpole, NH, was estimated at 9.60 million lb/yr and 1,750 (lb/mi 2 )/yr, respectively. The mean annual load and yield of total nitrogen leaving the upper Connecticut River Basin, as estimated at the Connecticut River at Thompsonville, CT, was 21.6 million lb/yr and 2,230 (lb/mi 2 )/yr, respectively.

Massachusetts, New Hampshire, Vermont↗

Field trials to test new trap technologies for monitoring Culex populations and the efficacy of the biopesticide formulation VectoMax® FG for control of larval Culex quinquefasciatus in the Alaka'i Plateau, Kaua'i, Hawaii

Mosquito-borne avian malaria Plasmodium relictum is a key limiting factor for endemic Hawaiian forest birds. In the past decade, populations of Kaua‘i’s endemic forest birds have been in a steep decline due to an increase in malaria transmission. To evaluate the use of available biopesticides for short-term mosquito control we tested the efficacy of the biopesticide VectoMax® FG against Culex quinquefasciatus larvae in naturally occurring perched stream pools, seeps, and ground pools in forest bird habitat in Kaua‘i’s remote Alaka‘i Plateau. We also tested the efficacy of conventional and newer traps and attractants for the capture of adult Culex quinquefasciatus in Hawaiian rain forests and monitored adult mosquito populations at the Kaua‘i field site. During field trials conducted on Hawai‘i Island we captured more Culex quinquefasciatus in gravid traps than in host-seeking traps. Among the host-seeking traps, Biogents BG-Sentinel 2 traps baited with CO2 and BG-Lure caught more Culex quinquefasciatus and Aedes japonicus japonicus than CDC (Centers for Disease Control and Prevention) traps baited with compressed CO2, CDC traps baited with dry ice, or Biogents BG-Sentinel 2 traps baited with BG-Lure and octenol but not CO2. Both Biogents BG-Sentinel 2 and CDC miniature traps baited with compressed CO2 or dry ice captured significantly more Culex quinquefasciatus than Biogents BG-Sentinel 2 traps baited with octenol and BG-Lure but without CO2. We also found that gravid traps baited with timothy hay infusions caught significantly more Culex quinquefasciatus than traps baited with either a commercial gravid mosquito attractant or an infusion made with pelleted rabbit feed. Traps baited with an infusion of timothy hay and donkey dung were the most effective for Culex quinquefasciatus. On Kaua‘i, we operated Biogents BG-Sentinel 2 traps baited with CO2 and gravid traps and captured 29 mosquitoes in 182 trap-nights from October–November 2016 and 126 mosquitoes in 254 trap-nights from September–October 2017. Contrary to our findings on Hawai‘i Island, most mosquitoes (96%) were captured in Biogents BG-Sentinel 2 traps indicating considerable site-to-site variability in trap efficacy. Weekly adult trapping on Kaua‘i indicates Culex quinquefasciatus populations peaked in October but provided no reliable evidence that larval control had any significant effect on adult populations. Overall, VectoMax® FG was very effective at larval control reducing larval abundance by 95% at 48 hours and out to 1-week post-treatment. Treatment was most effective (100% at 1-week post-treatment) in perched pools when early instar larvae were present and least effective in seeps when pupae and fourth instar larvae were most common. Although post-treatment counts fluctuated dramatically, we observed no evidence of population level impacts to the two most common non-target invertebrates: the water strider Microvelia vagans and endemic damselfly naiads (Megalagrion sp.). VectoMax® FG appears to be an effective and safe biopesticide for the local control of Culex quinquefasciatus larvae in forest bird habitat in the Alaka‘i Plateau. Further studies will be necessary to determine if local larval control significantly reduces adult mosquito abundance and, ultimately, avian malaria transmission, and if there are long term, non-target effects associated with repeated use of VectoMax® FG in natural Hawaiian waterways.

Hawaii↗

Maps of estimated nitrate and arsenic concentrations in basin-fill aquifers of the southwestern United States

Human-health concerns and economic considerations associated with meeting drinking-water standards motivated a study of the vulnerability of basin-fill aquifers to nitrate contamination and arsenic enrichment in the southwestern United States. Statistical models were developed by using the random forest classifier algorithm to predict concentrations of nitrate and arsenic across a model grid representing about 190,600 square miles of basin-fill aquifers in parts of Arizona, California, Colorado, Nevada, New Mexico, and Utah. The statistical models, referred to as classifiers, reflect natural and human-related factors that affect aquifer vulnerability to contamination and relate nitrate and arsenic concentrations to explanatory variables representing local- and basin-scale measures of source and aquifer susceptibility conditions. Geochemical variables were not used in concentration predictions because they were not available for the entire study area. The models were calibrated to assess model accuracy on the basis of measured values. Only 2 percent of the area underlain by basin-fill aquifers in the study area was predicted to equal or exceed the U.S. Environmental Protection Agency drinking-water standard for nitrate as N (10 milligrams per liter), whereas 43 percent of the area was predicted to equal or exceed the standard for arsenic (10 micrograms per liter). Areas predicted to equal or exceed the drinking-water standard for nitrate include basins in central Arizona near Phoenix; the San Joaquin Valley, the Santa Ana Inland, and San Jacinto Basins of California; and the San Luis Valley of Colorado. Much of the area predicted to equal or exceed the drinking-water standard for arsenic is within a belt of basins along the western portion of the Basin and Range Physiographic Province that includes almost all of Nevada and parts of California and Arizona. Predicted nitrate and arsenic concentrations are substantially lower than the drinking-water standards in much of the study area-about 93 percent of the area underlain by basin-fill aquifers was less than one-half the standard for nitrate as N (5.0 milligrams per liter), and 50 percent was less than one-half the standard for arsenic (5.0 micrograms per liter). The predicted concentrations and the improved understanding of the susceptibility and vulnerability of southwestern basin-fill aquifers to nitrate contamination and arsenic enrichment can be used by water managers as a qualitative tool to assess and protect the quality of groundwater resources in the Southwest.

Arizona, California, Colorado, Idaho, Nevada, New ↗

Forest soil chemistry and terrain attributes in a Catskills watershed

Knowledge of soil chemistry is useful in assessing the sensitivity of forested areas to natural and anthropogenic disturbances, but characterizing large areas is expensive because of the large sample numbers required and the cost of soil chemical analyses. We collected and chemically analyzed soil samples from 72 sites within a 214-ha watershed in the Catskill Mountains of New York to evaluate factors that influence soil chemistry and whether terrain features could be used to predict soil chemical properties. Using geographic information system (GIS) techniques, we determined five terrain attributes at each sampling location: (i) slope, (ii) aspect, (iii) elevation, (iv) topographic index, and (v) flow accumulation. These attributes were ineffective in predicting the chemical properties of organic and mineral soil samples; together they explained only 4 to 25% of the variance in pH(w), effective cation-exchange capacity (CEC(e)), exchangeable bases, exchangeable acidity, total C, total N, and C/N ratio. Regressions among soil properties were much better; total C and pH(w) together explained 33 to 66% of the variation in exchangeable bases and CEC(e). Total C was positively correlated with N (r = 0.91 and 0.96 in Oa horizons and mineral soil, respectively), exchangeable bases (r = 0.65, 0.76), and CEC(e) (r = 0.54, 0.44), indicating the importance of organic matter to the chemistry of these acidic soils. The fraction of CEC(e) occupied by H explained 44% of the variation in pH(w). Soil chemical properties at this site vary on spatial scales finer than typical GIS analyses, resulting in relationships with poor predictive power. Thus, interrelationships among soil properties are more reliable for prediction.Knowledge of soil chemistry is useful in assessing the sensitivity of forested areas to natural and anthropogenic disturbances, but characterizing large areas is expensive because of the large sample numbers required and the cost of soil chemical analyses. We collected and chemically analyzed soil samples from 72 sites within a 214-ha watershed in the Catskill Mountains of New York to evaluate factors that influence soil chemistry and whether terrain features could be used to predict soil chemical properties. Using geographic information system (GIS) techniques, we determined five terrain attributes at each sampling location: (i) slope, (ii) aspect, (iii) elevation, (iv) topographic index, and (v) flow accumulation. These attributes were ineffective in predicting the chemical properties of organic and mineral soil samples; together they explained only 4 to 25% of the variance in pHw, effective cation-exchange capacity (CECe), exchangeable bases, exchangeable acidity, total C, total N, and C/N ratio. Regressions among soil properties were much better; total C and pHw together explained 33 to 66% of the variation in exchangeable bases and CECe. Total C was positively correlated with N (r = 0.91 and 0.96 in Oa horizons and mineral soil, respectively), exchangeable bases (r = 0.65, 0.76), and CECe (r = 0.54, 0.44), indicating the importance of organic matter to the chemistry of these acidic soils. The fraction of CECe occupied by H explained 44% of the variation in pHw. Soil chemical properties at this site vary on spatial scales finer than typical GIS analyses, resulting in relationships with poor predictive power. Thus, interrelationships among soil properties are more reliable for prediction.

New York↗

Nutrient Loads and Ground-Water Residence Times in an Agricultural Basin in North-Central Connecticut

Nutrient loads from ground-water discharge were studied in Broad Brook Basin, a 15.8-square mile basin in north-central Connecticut, dominated by agricultural activity. Loads were calculated, along with the travel times of ground water from recharge to discharge areas, to estimate the time required for the effects of Best Management Practices (BMPs) to be observed. Most concentrations of nitrogen and phosphorus in Broad Brook exceeded U.S. Environmental Protection Agency Ecoregion XIV nutrient criteria for streams. During the study period (1993-2004), annual loads of nitrogen from Broad Brook Basin ranged from 117,000 to 270,000 pounds (lb), and yields were about 10 times larger than those from forested basins in Connecticut. Ground-water discharge from the aquifer to the streams (base flow) during the study period was estimated with hydrograph separation and accounted for 82 percent of the total runoff from the basin. Nitrate nitrogen in base flow averaged 71 percent of the annual load of total nitrogen discharged from the basin, indicating that the largest source of nitrogen was likely from ground-water discharge. Annual loads of total phosphorus from the basin ranged from 2,330 to 14,400 lb, and yields were about five times higher than those from forested basins in Connecticut. Dissolved phosphorus averaged about 71 percent of the total phosphorus load, and ground-water discharge accounted for only as much as 40 percent of the annual load of dissolved phosphorus; therefore, phosphorus loads are dominated by stormwater-runoff events. Ground-water samples collected from 11 wells in the basin contained elevated concentrations of nitrite plus nitrate nitrogen. Dissolved gas analyses indicated that little denitrification was occurring in the aquifer. Apparent ages of the ground-water samples ranged from greater than 2 to more than 50 years based on sulfur hexafluoride, tritium, and tritium/helium-3 analyses. A three-dimensional ground-water-flow model was used in conjunction with a particle-tracking program to determine advective travel times to streams from all subareas in the basin. The model simulations indicated that about half the discharge to Broad Brook and its tributaries was recharged more than 10 years ago, and that about 8 percent of the discharge was recharged prior to 1960. The effects of changes in nitrate nitrogen loading at the water table were evaluated by applying new loading rates from urban and agricultural land and the simulated advective ground-water travel times. Five scenarios were tested: reducing estimated nitrate nitrogen concentrations in recharging ground water under urban and agricultural land areas to concentrations in forested areas; reducing estimated nitrate nitrogen concentrations under urban and agricultural land areas to the U.S. Environmental Protection Agency recommended nutrient criteria for streams; and reducing estimated nitrate nitrogen concentrations under urban and agricultural land areas by 50 percent, 10 percent, and 5 percent. Under the first two scenarios, the base-flow load of nitrate nitrogen could be reduced by 25 percent in slightly more than 5 years, although the reduction required by these scenarios is likely unrealistic. A 25-percent reduction in base-flow load of nitrate nitrogen could be achieved in about 10 years under the third scenario (where concentrations from urban and agricultural areas were reduced by 50 percent). Under this scenario, a 46-percent reduction could be achieved in about 60 years. The scenarios indicate that in this basin, and in other similar basins in Connecticut underlain by extensive glacial stratified deposits, there can be a substantial time lag between activities at the land surface and effects on the quality of water discharged to streams from ground water. This finding may be important in the expectations for water-quality improvements from land-use changes or BMPs.

Scientific Investigations Report↗

Modeling impacts of drought-induced salinity intrusion on carbon dynamics in tidal freshwater forested wetlands

Tidal freshwater forested wetlands (TFFW) provide critical ecosystem services including essential habitat for a variety of wildlife species and significant carbon sinks for atmospheric carbon dioxide. However, large uncertainties remain concerning the impacts of climate change on the magnitude and variability of carbon fluxes and storage across a range of TFFW. In this study, we developed a process-driven Tidal Freshwater Wetlands DeNitrification-DeComposition model (TFW-DNDC) that has integrated new features, such as soil salinity effects on plant productivity and soil organic matter decomposition to explore carbon dynamics in TFFW in response to drought-induced saltwater intrusion. Eight sites along the floodplains of the Waccamaw River (USA) and the Savannah River (USA) were selected to represent TFFW transition from healthy to moderately and highly salt-impacted forests, and eventually to oligohaline marshes. TFW-DNDC was calibrated and validated using field observed annual litterfall, stem growth, root growth, soil heterotrophic respiration and soil organic carbon storage. Analyses indicate that plant productivity and soil carbon sequestration in TFFW could change substantially in response to increased soil porewater salinity and reduced soil water table due to drought, but in interactive ways dependent on the river simulated. Such responses are variable due to non-linear relationships between carbon cycling processes and environmental drivers. Plant productivity, plant respiration, soil organic carbon sequestration rate and storage in the highly salt-impacted forest sites decreased significantly under drought conditions compared to normal conditions. Considering the high likelihood of healthy and moderately salt-impacted forests becoming highly salt-impacted forests under future climate change and sea-level rise, it is very likely that TFFW will lose their capacity as carbon sinks without up-slope migration.

Georgia, South Carolina↗

Status of whitebarkpine in the Greater Yellowstone Ecosystem: A step-trend analysis comparing 2004-2007 to 2008-2011

Whitebark pine (Pinus albicaulis) is a foundation and keystone species in upper subalpine environments of the northern Rocky Mountains that strongly influences the biodiversity and productivity of high-elevation ecosystems (Tomback et al. 2001, Ellison et al. 2005). Throughout its historic range, whitebark pine has decreased significantly as a major component of high-elevation forests. As a result, it is critical to understand the challenges to whitebark pine—not only at the tree and stand level, but also as these factors influence the distribution of whitebark pine across the Greater Yellowstone Ecosystem (GYE). In 2003, the National Park Service (NPS) Greater Yellowstone Inventory & Monitoring Network identified whitebark pine as one of twelve significant natural resource indicators or vital signs to monitor (Jean et al. 2005, Fancy et al. 2009) and initiated a long-term, collaborative monitoring program. Partners in this effort include the U.S. Geological Survey, U.S. Forest Service, and Montana State University with representatives from each comprising the Greater Yellowstone Whitebark Pine Monitoring Working Group. The objectives of the monitoring program are to assess trends in (1) the proportion of live, whitebark pine trees (>1.4-m tall) infected with white pine blister rust (blister rust); (2) to document blister rust infection severity by the occurrence and location of persisting and new infections; (3) to determine mortality of whitebark pine trees and describe potential factors contributing to the death of trees; and (4) to assess the multiple components of the recruitment of understory whitebark pine into the reproductive population. In this report we summarize the past eight years (2004-2011) of whitebark pine status and trend monitoring in the GYE. Our study area encompasses six national forests (NF), two national parks (NP), as well as state and private lands in portions of Wyoming, Montana, and Idaho; this area is collectively described as the GYE here and in other studies. The sampling design is a probabilistic, twostage cluster design with stands of whitebark pine as the primary units and 10x50 m belt transects as the secondary units. Primary sampling units (stands) were selected randomly from a sample frame of approximately 10,770 mapped pure and mixed whitebark pine stands ≥2.0 hectares in the GYE (Dixon 1997, Landenburger 2012). From 2004 through 2007 (monitoring transect establishment or initial time-step), we established 176 permanent belt transects (secondary sampling units=176) in 150 whitebark pine stands and permanently marked approximately 4,740 individual trees >1.4 m tall to monitor long-term changes in blister rust infection and survival rates. Between 2008 and 2011 (revisit time-step), these same 176 transects were surveyed and again all previously tagged trees were observed for changes in blister rust infection and survival status. Objective 1. Using a combined ratio estimator, we estimated the proportion of live trees infected in the GYE in the initial time-step (2004-2007) to be 0.22 (0.031 SE). Following the completion of all surveys in the revisit time-step (2008-2011), we estimated the proportion of live trees infected with white pine blister rust as 0.23 (0.028 SE; Table 2). We detected no significant change in the proportion of trees infected in the GYE between the two time-steps. Objective 2. We documented blister rust canker locations as occurring in the canopy or bole. We compared changes in canker position between the initial time-step (2004-2007) and the revisit time-step (2008-2011) in order to assess changes in infection severity. This analysis included the 3,795 trees tagged during the initial time-step that were located and documented as alive at the end of the revisit time-step. At the end of the revisit time-step, we found 1,217 trees infected with blister rust. This includes the 287 newly tagged trees in the revisit time step of which 14 had documented infections. Of these 1,217 trees, 780 trees were infected with blister rust in both time steps. Trees with only canopy cankers made up approximately 43% (519 trees) of the total number of trees infected with blister rust at the end of the revisit time-step, while trees with only bole cankers comprised 20% (252 trees), and those with both canopy and bole cankers included 37% (446 trees) of the infected sample. A bole infection is considered to be more consequential than a canopy canker, as it compromises not only the overall longevity of the tree, but its functional capacity for reproductive output as well (Kendall and Arno 1990, Campbell and Antos 2000, McDonald and Hoff 2001, Schwandt and Kegley 2004). In addition to infection location, we also documented infection transition between the canopy and bole. Of the 780 live trees that were infected with blister rust in both time-steps, approximately 31% (242) maintained canopy cankers and 36% (281) retained bole infections at the end of the revisit time-step. Infection transition from canopy to bole occurred in 30% (234) of the revisit time-step trees while 3% (23) transitioned from bole to canopy infections during this period. Objective 3. To determine whitebark pine mortality, we resurveyed all belt transects to reassess the life status of permanently tagged trees >1.4 m tall. We compared the total number of live tagged trees recorded during monitoring transect establishment to the total number of resurveyed dead tagged trees recorded during the revisit time-step and identified all potential mortality-influencing conditions (blister rust, mountain pine beetle, fire and other). By the end of the revisit time-step, we observed a total of 975 dead tagged whitebark pine trees; using a ratio estimator, this represents a loss of approximately 20% (SE=4.35%) of the original live tagged tree population (GYWPMWG 2012). Objective 4. To investigate the proportion of live, reproducing tagged trees, we divided the total number of positively identified cone-bearing trees by the total number of live trees in the tagged tree sample at the end of the revisit time-step. To approximate the average density of recruitment trees per stand, trees ≤1.4 m tall were summed by stand (within the 500 m² transect area) and divided by the total number of stands. Reproducing trees made up approximately 24% (996 trees) of the total live tagged population at the end of the revisit time-step. Differentiating between whitebark pine and limber pine seedlings or saplings is problematic given the absence of cones or cone scars. Therefore, understory summaries as presented in this report may include individuals of both species when they are sympatric in a stand. The average density of small trees ≤1.4 m tall was 53 understory trees per 500 m². Raw counts of these understory individuals ranged from 0-635 small trees per belt transect. In addition, a total of 287 trees were added to the tagged tree population by the end of 2011. These newly tagged trees were individuals that upon subsequent revisits had reached a height of >1.4 m tall and subsequently added to the sample. Throughout the past decade in the GYE, monitoring has helped document shifts in whitebark pine forests; whitebark pine stands have been impacted by insect, pathogen, wildland fire, and other disturbance events. Blister rust infection is ubiquitous throughout the ecosystem and infection proportions are variable across the region. And while we have documented mortality of whitebark pine, we have also recorded considerable recruitment. We provide this first step-trend report as a quantifiable baseline for understanding the state of whitebark pine in the GYE. Many aspects of whitebark pine health are highly variable across the range of its distribution in the GYE. Through sustained implementation of the monitoring program, we will continue efforts to document and quantify whitebark pine forest dynamics as they arise under periodic upsurges in insect, pathogen, fire episodes, and climatic events in the GYE. Since its inception, this monitoring program perseveres as one of the only sustained longterm efforts conducted in the GYE with a singular purpose to track the health and status of this prominent keystone species.

Natural Resource Technical Report↗