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At least 667 records · Page 37Linked to original sources
USGS2024

Flooding and dam operations facilitate rapid upstream migrations of native and invasive fish species on a regulated large river

Dams commonly restrict fish movements in large rivers but can also help curtail the spread of invasive species, such as invasive bigheaded carps ( Hypophthalmichthys spp). To determine how dams in the upper Mississippi River (UMR) affect large-scale invasive and native fish migrations, we tracked American paddlefish ( Polyodon spathula ) and bigheaded carp across > 600 river km (rkm) and 16 navigation locks and dams (LD) of the UMR during 2 years with contrasting water levels. In 2022, a low-water year, both native paddlefish and invasive bigheaded carp had low passage rates (4% and 0.6% respectively) through LD15, a movement bottleneck being studied for invasive carp control. In contrast, flooding in 2023 led to open-river conditions across multiple dams simultaneously, allowing 53% of paddlefish and 46% of bigheaded carp detected in Pool 16 to move upstream through LD15. Bigheaded carp passed upstream through LD15 rapidly (μ = 32 rkm per day) a maximum of 381 rkm, whereas paddlefish moved an average of 9 upstream rkm per day (maximum of 337 rkm). Our results can inform managers examining trade-offs between actions that enhance native fish passage or deter movements of invasive species. This understanding is critical because current climate change models project increases in flooding events like that observed during 2023.

Illinois, Iowa, Minnesota, Wisconsin↗
USGS2011

Hawaii Volcano Observatory 75th anniversary

The 75th anniversary of the founding of the U.S. Geological Survey (USGS) Hawaiian Volcano Observatory (HVO) was celebrated during January 1987. The festivities began on January 9 with the opening in Hilo of a major exhibit at the Wailoa Center on the current work of HVO, its history, and its special relationship to Hawaii Volcanoes National Park. In addition to spectacular photographs of volcanic activity and HVO field work, the exhibit featured continuous showings of underwater footage taken during the recent eruptive activity (December 1986) and a computer monitor that displayed the activity of HVO seismic net in real time. The exhibit, which was coordinated by HVO librarian/photo archivist Taeko Jane Takahashi and which featured the professional work of HVO photographer J . D. Griggs, was well received and will probably form the core of a future traveling exhibit.

Hawaii↗
USGS2012

Potential climate-induced runoff changes and associated uncertainty in four Pacific Northwest estuaries

As part of a larger investigation into potential effects of climate change on estuarine habitats in the Pacific Northwest, we estimated changes in freshwater inputs into four estuaries: Coquille River estuary, South Slough of Coos Bay, and Yaquina Bay in Oregon, and Willapa Bay in Washington. We used the U.S. Geological Survey's Precipitation Runoff Modeling System (PRMS) to model watershed hydrological processes under current and future climatic conditions. This model allowed us to explore possible shifts in coastal hydrologic regimes at a range of spatial scales. All modeled watersheds are located in rainfall-dominated coastal areas with relatively insignificant base flow inputs, and their areas vary from 74.3 to 2,747.6 square kilometers. The watersheds also vary in mean elevation, ranging from 147 meters in the Willapa to 1,179 meters in the Coquille. The latitudes of watershed centroids range from 43.037 degrees north latitude in the Coquille River estuary to 46.629 degrees north latitude in Willapa Bay. We calibrated model parameters using historical climate grid data downscaled to one-sixteenth of a degree by the Climate Impacts Group, and historical runoff from sub-watersheds or neighboring watersheds. Nash Sutcliffe efficiency values for daily flows in calibration sub-watersheds ranged from 0.71 to 0.89. After calibration, we forced the PRMS models with four North American Regional Climate Change Assessment Program climate models: Canadian Regional Climate Model-(National Center for Atmospheric Research) Community Climate System Model version 3, Canadian Regional Climate Model-Canadian Global Climate Model version 3, Hadley Regional Model version 3-Hadley Centre Climate Model version 3, and Regional Climate Model-Canadian Global Climate Model version 3. These are global climate models (GCMs) downscaled with regional climate models that are embedded within the GCMs, and all use the A2 carbon emission scenario developed by the Intergovernmental Panel on Climate Change. With these climate-forcing outputs, we derived the mean change in flow from the period encompassing the 1980s (1971-1995) to the period encompassing the 2050s (2041-2065). Specifically, we calculated percent change in mean monthly flow rate, coefficient of variation, top 5 percent of flow, and 7-day low flow. The trends with the most agreement among climate models and among watersheds were increases in autumn mean monthly flows, especially in October and November, decreases in summer monthly mean flow, and increases in the top 5 percent of flow. We also estimated variance in PRMS outputs owing to parameter uncertainty and the selection of climate model using Latin hypercube sampling. This analysis showed that PRMS low-flow simulations are more uncertain than medium or high flow simulations, and that variation among climate models was a larger source of uncertainty than the hydrological model parameters. These results improve our understanding of how climate change may affect the saltwater-freshwater balance in Pacific Northwest estuaries, with implications for their sensitive ecosystems.

Oregon;Washington↗
USGS2022

Dispersal limitations increase vulnerability under climate change for reptiles and amphibians in the southwestern United States

Species conservation plans frequently rely on information that spans political and administrative boundaries, especially when predictions are needed of future habitat under climate change; however, most species conservation plans and their requisite predictions of future habitat are often limited in geographical scope. Moreover, dispersal constraints for species of concern are not often incorporated into distribution models, which can result in overly optimistic predictions of future habitat. We used a standard modeling approach across a suite of 23 taxa of amphibians and reptiles in the North American deserts (560,024 km 2 across 13 ecoregions) to assess impacts of climate change on habitat and combined landscape population dispersal simulations with species distribution modeling to reduce the risk of predicting future habitat in areas that are not available to species given their dispersal abilities. We used 3 general circulation models and 2 representative concentration pathways (RCPs) to represent multiple scenarios of future habitat potential and assess which study species may be most vulnerable to changes forecasted under each climate scenario. Amphibians were the most vulnerable taxa, but the most vulnerable species tended to be those with the lowest dispersal ability rather than those with the most specialized niches. Under the most optimistic climate scenario considered (RCP 2.6; a stringent scenario requiring declining emissions from 2020 to near zero emissions by 2100), 76% of the study area may experience a loss of >20% of the species examined, while up to 87% of the species currently present may be lost in some areas under the most pessimistic climate scenario (RCP 8.5; a scenario wherein greenhouse gases continue to increase through 2100 based on trajectories from the mid-century). Most areas with high losses were concentrated in the Arizona and New Mexico Plateau ecoregion, the Edwards Plateau in Texas, and the Southwestern Tablelands in New Mexico and Texas, USA. Under the most pessimistic climate scenario, all species are predicted to lose some existing habitat, with an average of 34% loss of extant habitat across all species. Even under the most optimistic scenario, we detected an average loss of 24% of extant habitat across all species, suggesting that changing climates may influence the ranges of reptiles and amphibians in the Southwest.

Arizona, California, Nevada, New Mexico, Texas, Ut↗
USGS2007

A siphon gage for monitoring surface-water levels

A device that uses a siphon tube to establish a hydraulic connection between the bottom of an onshore standpipe and a point at the bottom of a water body was designed and tested for monitoring surface-water levels. Water is added to the standpipe to a level sufficient to drive a complete slug of water through the siphoning tube and to flush all air out of the system. The water levels in the standpipe and the water body equilibrate and provide a measurable static water surface in the standpipe. The siphon gage was designed to allow quick and accurate year-round measurements with minimal maintenance. Currently available devices for monitoring surface-water levels commonly involve time-consuming and costly installation and surveying, and the movement of reference points and the presence of ice cover in cold regions cause discontinuity and inaccuracy in the data collected. Installation and field testing of a siphon gage using 0.75-in-diameter polyethylene tubing at Ashumet Pond in Falmouth, Massachusetts, demonstrated that the siphon gage can provide long-term data with a field effort and accuracy equivalent to measurement of ground-water levels at an observation well.A device that uses a siphon tube to establish a hydraulic connection between the bottom of an onshore standpipe and a point at the bottom of a water body was designed and tested for monitoring surface-water levels. Water is added to the standpipe to a level sufficient to drive a complete slug of water through the siphoning tube and to flush all air out of the system. The water levels in the standpipe and the water body equilibrate and provide a measurable static water surface in the standpipe. The siphon gage was designed to allow quick and accurate year-round measurements with minimal maintenance. Currently available devices for monitoring surface-water levels commonly involve time-consuming and costly installation and surveying, and the movement of reference points and the presence of ice cover in cold regions cause discontinuity and inaccuracy in the data collected. Installation and field testing of a siphon gage using 0.75-in-diameter polyethylene tubing at Ashumet Pond in Falmouth, Massachusetts, demonstrated that the siphon gage can provide long-term data with a field effort and accuracy equivalent to measurement of ground-water levels at an observation well.

Journal of the American Water Resources Associatio↗
USGS2005

Relationships between recapture rates from different gears for estimating walleye abundance in northern Wisconsin lakes

Maximizing sampling efficiency and reducing sampling costs are desirable goals for fisheries management agencies. Expensive and labor-intensive methods (such as mark-recapture) are commonly used to estimate the population abundance of walleye Sander vitreus, but more efficient methods may be available. We compared recapture rates from surveys and harvests to evaluate the efficiency of currently used recapture gears and the potential for using gears that require less effort. To evaluate the usefulness of walleye harvest as mark-recapture samples, we used errors-in-variables models to determine whether recapture rates differed between fyke-netting and spearing, electrofishing and spearing, and electrofishing and angling. We found no significant differences between fyke-netting and adult walleye electrofishing recapture rates or between spearing and adult walleye electrofishing recapture rates. In contrast, we found that recapture rates from angling and electrofishing differed significantly in lakes with and without minimum length limits. We concluded that the lack of significant differences between the slopes of some harvest and survey recapture rates may allow the use of harvest recapture rates to estimate walleye abundance, but the biases associated with each gear should be considered. We also concluded that more attention should be given to understanding the biases of recapture gears. ?? Copyright by the American Fisheries Society 2005.

North American Journal of Fisheries Management↗
USGS2001

Occurrence of selected radionuclides in ground water used for drinking water in the United States: A reconnaissance survey, 1998

The U.S. Geological Survey, in collaboration with the U.S. Environmental Protection Agency, the American Water Works Association, and the American Water Works Service Company, completed a targeted national reconnaissance survey of selected radionuclides in public ground-water supplies. Radionuclides analyzed included radium-224 (Ra-224), radium-226 (Ra-226), radium-228 (Ra-228), polonium-210 (Po-210) and lead-210 (Pb-210).This U.S. Geological Survey reconnaissance survey focused intentionally on areas with known or suspected elevated concentrations of radium in ground water to determine if Ra-224 was also present in the areas where other isotopes of radium had previously been detected and to determine the co-occurrence characteristics of the three radium isotopes (Ra-224, Ra-226, and Ra-228) in those areas. Ninety-nine raw-water samples (before water treatment) were collected once over a 6-month period in 1998 and 1999 from wells (94 of which are used for public drinking water) in 27 States and 8 physiographic provinces. Twenty-one of the 99 samples exceeded the current U.S. Environmental Protection Agency drinking-water maximum contaminant level of 5 picocuries per liter (pCi/L) for combined radium (Ra-226 + Ra-228). Concentrations of Ra-224 were reported to exceed 1 pCi/L in 30 percent of the samples collected, with a maximum concentration of 73.6 pCi/L measured in water from a nontransient, noncommunity, public-supply well in Maryland. Radium-224 concentrations generally were higher than those of the other isotopes of radium. About 5 percent of the samples contained concentrations of Ra-224 greater than 10 pCi/L, whereas only 2 percent exceeded 10 pCi/L for either Ra-226 or Ra-228. Concentrations of Ra-226 greater than 1 pCi/L were reported in 33 percent of the samples, with a maximum concentration of 16.9 pCi/L measured in water from a public-supply well in Iowa. Concentrations of Ra-228 greater than 1 pCi/L were reported in 22 samples, with a maximum concentration of 72.3 pCi/L measured in water from a non-transient, noncommunity, public-supply well in Maryland.Radium-224, which is a decay product of Ra-228 in the Th-232 decay series, was significantly correlated with Ra-228 (Spearman?s rank correlation coefficient ?r? equals 0.82) and to a lesser degree with Ra-226 (r equals 0.69), which is an isotope in the U-238 decay series. The rank correlation coefficient between Ra-226 and Ra-228 was 0.63. The high correlation between Ra-224 and Ra-228 concentrations and the corresponding isotopic ratios of the two (about 1:1 in 90 percent of the samples) indicates that the two radionuclides occur in approximately equal concentrations in most ground water sampled. Thus, Ra-228 can be considered as a reasonable proxy indicator for the occurrence of Ra-224 in ground water.The maximum concentration of Po-210 was 4.85 pCi/L and exceeded 1 pCi/L in only two samples. The maximum concentration of Pb-210 was 4.14 pCi/L, and about 10 percent of the samples exceeded 1 pCi/L. Areas with known, or suspected, elevated concentrations of polonium and lead were not targeted in this survey.Three major implications are drawn for future radionuclide monitoring on the basis of this information: (1) grossalpha particle analyses of ground water should be done within about 48-72 hours after collection to determine the presence of the short-lived, alpha-particle emitting isotopes, such as Ra-224, which was detected in elevated concentrations in many of the samples collected for this survey; (2) the isotope ratios of Ra-224 to Ra-228 in ground water are variable on a national scale, but the two radioisotopes generally occur in ratios near 1:1, therefore, the more commonly measured Ra-228 can be used as an indicator of Ra-224 occurrence for some general purposes other than compliance; and (3) the isotopic ratios of Ra-226 to Ra-228 were less than 3:2 in many samples. These ratios corroborate results of previous studies that have shown the presence of Ra-228.

Water-Resources Investigations Report↗
USGS2019

Population dynamics and evaluation of management scenarios for white sturgeon in the Sacramento-San Joaquin River basin

Recent surveys suggest a declining population of White Sturgeon Acipenser transmontanus in the Sacramento–San Joaquin River basin (SSJ), California. Probable reasons for the decline include overharvest and habitat degradation compounded by poor recruitment during recent droughts. Despite the importance and status of White Sturgeon, knowledge of their population dynamics in the SSJ remains incomplete and additional information is needed to further inform management decisions. The purpose of this study was to evaluate the population dynamics of White Sturgeon in the SSJ and use the information to estimate the population-level response under plausible management scenarios. White Sturgeon in the SSJ exhibited fast growth and high rates of mortality and experienced relatively high levels of exploitation. Under current conditions, the population will likely continue to decrease (population growth rate λ = 0.97); however, there was considerable uncertainty in estimates of future population growth. Population growth of White Sturgeon in the SSJ was most influenced by the survival of sexually mature adults. The models also suggested that White Sturgeon in the SSJ could reach the replacement rate (i.e., λ ≥ 1.00) if total annual mortality for age-3 and older fish does not exceed 6%. Low levels of exploitation (i.e., <3%) would likely be required to maintain a stable population.

California↗
USGS2017

Evolutionary and functional mitogenomics associated with the genetic restoration of the Florida panther

Florida panthers are endangered pumas that currently persist in reduced patches of habitat in South Florida, USA. We performed mitogenome reference-based assemblies for most parental lines of the admixed Florida panthers that resulted from the introduction of female Texas pumas into South Florida in 1995. With the addition of 2 puma mitogenomes, we characterized 174 single nucleotide polymorphisms (SNPs) across 12 individuals. We defined 5 haplotypes (Pco1–Pco5), one of which (Pco1) had a geographic origin exclusive to Costa Rica and Panama and was possibly introduced into the Everglades National Park, Florida, prior to 1995. Haplotype Pco2 was native to Florida. Haplotypes Pco3 and Pco4 were exclusive to Texas, whereas haplotype Pco5 had an undetermined geographic origin. Phylogenetic inference suggests that haplotypes Pco1–Pco4 diverged ~202000 (95% HPDI = 83000–345000) years ago and that haplotypes Pco2–Pco4 diverged ~61000 (95% HPDI = 9000–127000) years ago. These results are congruent with a south-to-north continental expansion and with a recent North American colonization by pumas. Furthermore, pumas may have migrated from Texas to Florida no earlier than ~44000 (95% HPDI = 2000–98000) years ago. Synonymous mutations presented a greater mean substitution rate than other mitochondrial functional regions: nonsynonymous mutations, tRNAs, rRNAs, and control region. Similarly, all protein-coding genes were under predominant negative selection constraints. We directly and indirectly assessed the presence of potential deleterious SNPs in the ND2 and ND5 genes in Florida panthers prior to and as a consequence of the introduction of Texas pumas. Screenings for such variants are recommended in extant Florida panthers.

Journal of Heredity↗
USGS2025

Tourists or residents? Life history strategies of Rainbow Smelt in Lake Champlain

Objective Rainbow Smelt Osmerus mordax are the most important native prey fish in the coldwater food web of Lake Champlain, but their history in the lake is not well understood. Writers in the 1800s described a nonresident population of smelt that reached sizes greater than 315 mm that was sympatric with a population of individuals that matured at smaller sizes. No studies, however, have investigated mechanisms that cause the dimorphic size structure of Rainbow Smelt in Lake Champlain. Based on our results, larger fish appear to have life history strategy differences from most of the population, which allow them to grow to larger sizes, faster. We proposed three alternative hypotheses to explain the presence of these large Rainbow Smelt in Lake Champlain: (1) anadromous and landlocked Rainbow Smelt may both be present in the lake, (2) all Rainbow Smelt may be landlocked with the two morphotypes resulting from different diet preferences and/or differences in environmental niche occupancy, or (3) the largest Rainbow Smelt are long-lived and therefore had longer time for growth. Methods We tested these hypotheses using otolith microchemistry, diet (stomach content and stable isotope), and age analyses. Our length-at-age analyses showed that age structure was not bimodal, but there are fish present in the lake as large as those in the 1800s. Results Microelemental analysis indicated that Rainbow Smelt in Lake Champlain were landlocked, with no marine signature. Stomach contents of average-sized Rainbow Smelt were exclusively zooplankton and macroinvertebrates, while the larger Rainbow Smelt were primarily piscivorous and had greater δ 15 N values, which suggests a higher trophic position. A combination of hypotheses 2 and 3 most likely explains current population structure. Elevated manganese : magnesium ratios in larger Rainbow Smelt suggest that they may utilize a hypoxic environmental niche, a potential key life history strategy allowing for faster growth, suggesting that there may be intraspecific variation in how Rainbow Smelt use the basins of Lake Champlain. Conclusions Based on our results, larger fish appear to have life history strategy differences from most of the population that allow them to grow to larger sizes, faster. Future studies are needed to uncover the nuances of the mechanisms for growth.

New York, Vermont↗
USGS2001

Evaluating the efficiency of a one-square-meter quadrat sampler for riffle-dwelling fish

We evaluated the efficacy of a 1-m2 quadrat sampler for collecting riffle-dwelling fishes in an Ozark stream. We used a dual-gear approach to evaluate sampler efficiency in relation to species, fish size, and habitat variables. Quasi-likelihood regression showed sampling efficiency to differ significantly (P < 0.001) among species of four common fish families (Cyprinidae, Ictaluridae, Cottidae, and Percidae) but not among species within each family (P > 0.05). Sampling efficiency was significantly influenced by physical habitat characteristics. Mean current velocity negatively influenced sampling efficiencies for Cyprinidae (P = 0.009), Cottidae (P = 0.006), and Percidae (P < 0.001), and the amount of cobble substrate negatively influenced sampling efficiencies for Cyprinidae (P = 0.025), Ictaluridae (P < 0.001), and Percidae (P < 0.001). Water temperature negatively influenced sampling efficiency for Cyprinidae (P = 0.009) and Ictaluridae (P = 0.006). Species-richness efficiency was positively influenced (P = 0.002) by percentage of riffle sampled. Under average habitat conditions encountered in stream riffles, the 1-m2 quadrat sampler was most efficient at estimating the densities of Cyprinidae (84%) and Cottidae (80%) and least efficient for Percidae (57%) and Ictaluridae (31%).

North American Journal of Fisheries Management↗
USGS2021

OpenET: Filling a critical data gap in water management for the western United States

The lack of consistent, accurate information on evapotranspiration (ET) and consumptive use of water by irrigated agriculture is one of the most important data gaps for water managers in the western United States (U.S.) and other arid agricultural regions globally. The ability to easily access information on ET is central to improving water budgets across the West, advancing the use of data-driven irrigation management strategies, and expanding incentive-driven conservation programs. Recent advances in remote sensing of ET have led to the development of multiple approaches for field-scale ET mapping that have been used for local and regional water resource management applications by U.S. state and federal agencies. The OpenET project is a community-driven effort that is building upon these advances to develop an operational system for generating and distributing ET data at a field scale using an ensemble of six well-established satellite-based approaches for mapping ET. Key objectives of OpenET include: Increasing access to remotely sensed ET data through a web-based data explorer and data services; supporting the use of ET data for a range of water resource management applications; and development of use cases and training resources for agricultural producers and water resource managers. Here we describe the OpenET framework, including the models used in the ensemble, the satellite, meteorological, and ancillary data inputs to the system, and the OpenET data visualization and access tools. We also summarize an extensive intercomparison and accuracy assessment conducted using ground measurements of ET from 139 flux tower sites instrumented with open path eddy covariance systems. Results calculated for 24 cropland sites from Phase I of the intercomparison and accuracy assessment demonstrate strong agreement between the satellite-driven ET models and the flux tower ET data. For the six models that have been evaluated to date (ALEXI/DisALEXI, eeMETRIC, geeSEBAL, PT-JPL, SIMS, and SSEBop) and the ensemble mean, the weighted average mean absolute error (MAE) values across all sites range from 13.6 to 21.6 mm/month at a monthly timestep, and 0.74 to 1.07 mm/day at a daily timestep. At seasonal time scales, for all but one of the models the weighted mean total ET is within ±8% of both the ensemble mean and the weighted mean total ET calculated from the flux tower data. Overall, the ensemble mean performs as well as any individual model across nearly all accuracy statistics for croplands, though some individual models may perform better for specific sites and regions. We conclude with three brief use cases to illustrate current applications and benefits of increased access to ET data, and discuss key lessons learned from the development of OpenET.

western United States↗
USGS2024

A multiscale perspective for improving conservation of Conchos pupfish

Desert spring systems of the American southwest hold high local fish endemism and are ranked among the most threatened ecosystems in the world. The prioritization of conservation resources to protect species living within these arid landscapes requires knowledge of species abundance and distribution. The plight of Conchos pupfish ( Cyprinodon eximius ) is representative of freshwater fishes the world over, including population extirpations caused by human poisoning of streams and reservoir construction, to the extent that the species was once considered extinct in the USA. We developed a distance-sampling framework to monitor Conchos pupfish abundance and coupled this approach with species distribution modeling to guide conservation actions. Our multiscale approach included surveying abundances within 5-m transects at three reaches of the Devils River, where the last known USA populations persist. We combined this fine-scale analysis with species distribution modeling for stream segments across the range of the species in Mexico and USA. Modeling revealed Conchos pupfish abundance among transects was negatively correlated with current velocity and detection was negatively correlated with water depth. Estimated abundance at a reach where the species was previously reintroduced was greater than other reaches combined in November 2019, lowest in March 2021 when reach water levels were very low, then equivalent with other reaches by October 2021 after water returned to the reach. Modeled Conchos pupfish distribution illustrated a high probability of occurrence on the periphery of the species' overall range within Texas, USA and broadly across Chihuahua, Mexico, where proposed protected areas might benefit the species. Our study provides conservation guidance by establishing (1) baseline and trajectory values for abundance, (2) transect locations where abundances might be managed within existing protected areas, (3) reaches where high abundances could be used for future repatriation, and (4) stream segments where future surveys might be conducted to assess conservation opportunities.

Animal Conservation↗
USGS2014

The measurement and computation of flood‐discharge

The Geological Survey has been engaged for more than 50 years in measuring and publishing the discharge of streams of the United States. Measured discharges have ranged in quantity from a small fraction of a second‐foot measured volumetrically to more than 2,000,000 second‐feet measured by use of the current‐meter equipment recently developed by the Survey and described by the writer in the April 1938 issue of Civil Engineering . In this work, systematic and generally complete records of discharge are being obtained at about 3700 gaging‐stations maintained and operated by the United States Geological Survey. A typical structure at which records of river‐stages are obtained is shown in Figure 1. A discharge‐record at a gaging‐station is usually derived from a record of stage by means of a curve or table showing the stage‐discharge relation as determined by measurements of discharge distributed over the range of stage.

Eos, Transactions, American Geophysical Union↗
USGS2012

Occupancy modeling and estimation of the holiday darter species complex within the Etowah River system

Documenting the status of rare fishes is a crucial step in effectively managing populations and implementing regulatory mechanisms of protection. In recent years, site occupancy has become an increasingly popular metric for assessing populations, but species distribution models that do not account for imperfect detection can underestimate the proportion of sites occupied and the strength of the relationship with a hypothesized covariate. However, valid detection requires temporal or spatial replication, which is often not feasible due to logistical or budget constraints. In this study, we used a method that allowed for spatial replication during a single visit to evaluate the current status of the holiday darter species complex, Etheostoma sp. cf. E. brevirostrum, within the Etowah River system. Moreover, the modeling approach used in this study facilitated comparisons of factors influencing stream occupancy as well as species detection within sites. The results suggest that there is less habitat available for the Etowah holiday darter form (Etheostoma sp. cf. E. brevirostrum B) than for the Amicalola holiday darter form (Etheostoma sp. cf. E. brevirostrum A). Additionally, occupancy models suggest that even small decreases in forest cover within these headwater systems adversely affect holiday darter populations.

Etowah River System↗
USGS2018

Nearshore single-beam bathymetry data collected in 2015, Dauphin Island, Alabama

Dauphin Island, Alabama, is a barrier island located in the northern Gulf of Mexico that supports local residences, tourism, commercial infrastructure, and historic Fort Gaines. During the past decade, Dauphin Island was affected by several major hurricanes—Hurricanes Ivan (2004), Katrina (2005), and Isaac (2012)—and storms, along with sea-level rise, continue to present a threat to island stability. State and Federal managers are using a scientific approach to identify, formulate, and implement a long-term plan to provide restoration options for Dauphin Island, thereby helping increase its resilience against future storms and sea-level rise. Island morphology, including current bathymetry and shoreline data, is one scientific domain being investigated in an effort to produce a comprehensive restoration plan funded by an interagency grant from the National Fish and Wildlife Foundation Gulf Environmental Benefit Fund . In August 2015, the U.S. Geological Survey ( USGS ) St. Petersburg Coastal and Marine Science Center ( SPCMSC ), in cooperation with the U.S. Army Corps of Engineers at the U.S. Army Engineer Research and Development Center, Mobile District, and the State of Alabama, conducted bathymetric surveys of the nearshore waters surrounding Dauphin Island. This report provides a detailed methodology for the data acquisition and post-processing of 1,165-line kilometers (km) of single-beam bathymetry data collected under the USGS–SPCMSC Alabama Barrier Island Restoration Study . These data were acquired and processed under USGS field activity number 2015–326–FA . Data are provided in three datums: (1) the International Terrestrial Reference Frame of 2000, ellipsoid height (from –47.04 meters (m) to –29.36 m); (2) the North American Datum of 1983, CORS96 realization (NAD83 (CORS96)) horizontal, and the North American Vertical Datum 1988 GEOID12A vertical (from –0.24 m to –17.33 m); and (3) NAD83 (CORS96) horizontal, and mean lower low water vertical (from –0.12 m to –17.93 m). The x,y,z point datasets, trackline shapefiles, digital and handwritten Field Activity Collection Systems logs, one 50-m digital elevation model, and formal Federal Geographic Data Committee metadata are obtainable from the Data Downloads page or the associated USGS data release .

Alabama↗
USGS1990

Physical factors and their influence on the mussel fauna of a main channel border habitat of the upper Mississippi River

The habitats of mussel species in a portion of the main stem of Navigation Pool 10 of the upper Mississippi River were examined. Population composition, abundance, and sediment and current preferences were measured at 186 sites in the East Channel of the pool. Although total mussel abundance varied significantly as a function of sediment and current (p ≤ 0.05), abundance could be predicted in only 44% of sites by discriminant analysis models. Accurate prediction of abundance for most species also was poor. Species showed little discrimination in choosing main channel habitats, but could be broadly classified into species preferring fine to medium-fine sands (e.g., Truncilla truncata and Potamilus alatus) or coarser sands (e.g., Lampsilis cardium and Truncilla donaciformis). The endangered Lampsilis higginsi was found in a broad range of habitats similar to those occupied by many of the more common species, suggesting factors other than loss of adult habitat for the rarity of this species.

Journal of the North American Benthological Societ↗
USGS1996

Prevention of zebra mussel infestation and dispersal during aquaculture operations

The zebra mussel Dreissena polymorpha , an exotic invasive species, poses a major threat to North American fish management programs and the aquaculture industry. Fish hatcheries may become infected with zebra mussels from a variety of sources, including the water supply, fish shipments, boats, and equipment. The hatcheries could then serve as agents for the overland dispersal of zebra mussels into stocked waters and to other fish hatcheries. We evaluated the effectiveness and safety of aquaculture chemicals for use in controlling zebra mussels in fish hatcheries and preventing dispersal of veligers during fish transport. Chemicals were evaluated for use in fish transport and as disinfectants for ponds and equipment. Standardized static toxicity tests were conducted with representative species of warmwater, coolwater, and coldwater fishes and with larval (3‐d‐old veligers), early juvenile (settling larvae), and adult zebra mussels. Chemical concentrations and exposure durations were based on recommended treatment levels for fish, eggs, and ponds. Recommended treatment levels were also exceeded, if necessary, to establish lethal levels for zebra mussels of different developmental stages. Our results indicate that some chemicals currently in use in hatcheries may be effective for controlling zebra mussels in various operations. Chloride salts were the safest and most effective therapeutants tested for use in fish transport. The toxicity of chloride salts to fish varied among species and with temperature: only one treatment regime (sodium chloride at 10,000 mg/L) was safe to all fish species that we tested, but it was only effective on veliger and settler stages of the zebra mussel. Effective disinfectants were benzalkonium chloride for use on equipment and rotenone for use in ponds after fish are harvested. The regulatory status of the identified chemicals is discussed as well as several nonchemical control alternatives.

Progressive Fish-Culturist↗