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At least 595 records · Page 33Linked to original sources
USGS2022

Manatee population traits elucidated through photo-identification

Data on the demography and distribution of wildlife populations are important for informing conservation and management decisions; however, determination of life history traits and population trends often are elusive. All four extant species in the order Sirenia are deemed vulnerable to extinction; therefore, determining the demography and distribution for populations worldwide is crucial. Aerial surveys, radio-tagging and tracking, genetic sampling and analyses, health assessments, carcass examination, and photographic documentation are all techniques used to study sirenian populations. A 40 +-year computer-aided catalog of images and demography data collected on Florida manatees enables searches of individuals by descriptions of feature (scar) types and has enabled estimates of annual survival and reproductive rates, documented extra-limital movements, and advanced modeling designs. Photography is discussed as a method for the documentation of unique and acquired features specifically on Florida manatees. By means of these features, individual Florida manatees have been re-identified as far from their established range as Cape Cod, Massachusetts, Houston, Texas, and in Cuba, The Bahamas, and Mexico. The length of gestation (11–13 months) and calf dependency (1–3 years), and potential longevity in the wild (> 50 years), have been verified. To meet the challenge of an increasing number of images collected with the advent of digital photography, there has been an increasing interest and potential for new techniques to assist with individual identification. Several researchers are utilizing drones and artificial intelligence to find, photograph, and streamline the individual identification of sirenians as well as other marine mammal species. New techniques have potential to simplify the photographic identification of Florida manatees. Photographic documentation could be a model for demographic and distribution research of sirenian populations outside of Florida and as a tool to monitor the viability of sirenian populations, particularly as threats emerge due to anthropogenic pressures and global climate change.

Mammalian Biology↗
USGS2018

Refining aging criteria for northern sea otters in Washington State

Measurement of skull ossification patterns is a standard method for aging various mammalian species and has been used to age sea otters Enhydra lutris from Russia, California, and Alaska. Cementum annuli counts have also been verified as an accurate aging method for sea otters in Alaska. In this study, we compared cementum annuli count results and skull ossification patterns as methods for aging the northern sea otter, E. l. kenyoni, in Washington State. We found significant agreement between the two methods, suggesting that either method could be used to age sea otters in Washington. We found that ossification of the squamosal–jugal suture at the ventral glenoid fossa can be used to differentiate male subadults from adults. To assist field biologists or others without access to cementum annuli or skull ossification analysis techniques, we analyzed a suite of morphologic, physiologic, and developmental characteristics to assess whether a set of these more easily accessible parameters could also predict age class. We identified tooth condition score, evidence of reproductive activity in females, and tooth eruption pattern as the most useful criteria for classifying sea otters in Washington. We created a simple decision tree based on characteristics accessible in the field or at necropsy, which can be used to reliably predict age class of Washington sea otters as determined by cementum annuli. These techniques offer field biologists and marine mammal stranding networks a replicable, cost-conscious methodology to gather useful biological information from sea otters.

Washington↗
USGS1995

Mapping the response of riparian vegetation to possible flow reductions in the Snake River, Idaho

This study was initiated to determine the general effects of potential flow reductions in the middle Snake River (Swan Falls Dam downstream to the Idaho-Oregon border) on its riparian vegetation. Considerable water from the river is currently used to irrigate the adjacent Snake River Plain, and increased demand for water in the future is likely. The problem was subdivided into several research components including: field investigation of the existing riparian vegetation and river environment, hydrological modeling to calculate the effects of one flow scenario on hydrological regime, and integration of vegetation and hydrological modeling results with a Geographic Information System (GIs) to map the riverbed, island, and bank conditions under the scenario flow. Field work was conducted in summer 1990. Riparian vegetation along 40 U.S. Geological Survey cross-sections was sampled at approximately 1.25 mile intervals within the 50 mile long study area. Cross-section and flow data were provided by the U.S. Geological. Survey. GIs mapping of land/water cover using ARC/INFO was based on 1987 aerial photographs. Riverbed contour maps were produced by linking cross-section data, topographic contouring software ( anudem ), and GIs. The maps were used to spatially display shallow areas in the channel likely to become vegetated under reduced flow conditions. The scenario would reduce flow by approximately 20% (160 MAF) and lower the river an average of 0.5 ft. The scenario flow could cause a drop in the elevation of the riparian zone comparable to the drop in mean river level and expansion of the lower riparian zone into shallow areas of the channel. The GIs maps showed that the shallow areas of the channel more likely to become vegetated under the scenario flow are located in wide reaches near islands. Some possible ecological consequences of the scenario flow include a greater area of riparian habitat, reduced flow velocity and sedimentation in shallow channels leading to channel deactivation, increased island visitation and nest predation by predatory mammals due to loss of a water barrier between some islands and banks, and larger populations of alien plant species in the new riparian vegetation.

Idaho, Oregon↗
USGS2022

Comparison of two detection methods of a declining rodent, the Allegheny woodrat, in Virginia

Allegheny woodrats Neotoma magister are an imperiled small mammal species most associated with emergent rock habitats in the central Appalachian Mountains and the Ohio River Valley. The monitoring of populations and their spatiotemporal distributions typically has relied on labor-intensive livetrapping. The use of remote-detecting cameras holds promise for being an equally or more effective method to determine species presence, although trap-based captures permit the estimation of other parameters (e.g., survival, population size, site fidelity). In 2017, 2018, and 2020 we compared standard livetrapping with paired cameras for determining site occupancy of Allegheny woodrats in the central Appalachian Mountains of western Virginia. We further examined the influence of baited vs. unbaited cameras at several sites of confirmed occupancy in 2019. We observed that the detection probability using cameras was approximately 1.7 times that of live traps. Also, detection probability at baited camera traps was 1.3–2.0 times that of unbaited camera traps. Estimates of occupancy ranged from 0.44 to 0.49. Our findings suggest that the use of baited remote-detecting cameras provides a more effective method than livetrapping for detecting Allegheny woodrats. Our study provides a framework for the development of a large-scale, long-term monitoring protocol of Allegheny woodrats with the goals of identifying changes in the distribution of the species and quantifying local extinction and colonization rates at emergent rock outcrops and caves throughout the species' known distribution.

Virginia↗
USGS2020

Unexplained patterns of grey wolf Canis lupus natal dispersal

Natal dispersal (movement from the site of birth to the site of reproduction) is a pervasive but highly varied characteristic of life forms. Thus, understanding it in any species informs many aspects of biology, but studying it in most species is difficult. In the grey wolf Canis lupus , natal dispersal has been well studied. Maturing members of both sexes generally leave their natal packs, pair with opposite‐sex dispersers from other packs, near or far, select a territory, and produce their own offspring. However, three movement patterns of some natal‐dispersing wolves remain unexplained: 1) long‐distance dispersal when potential mates seem nearby, 2) round‐trip travels from their natal packs for varying periods and distances, also called extraterritorial movements, and often not resulting in pairing, and 3) coincidental dispersal by individual wolves from a given area in the same basic directions and over the same long distances. This perspective article documents and discusses these unexplained dispersal patterns, suggests possible explanations, and calls for additional research to understand them more clearly.

Mammal Review↗
USGS1989

Pulmonary lesions in disseminated visceral coccidiosis of sandhill and whooping cranes

Fifty cranes, consisting of 46 sandhill (Grus canadensis) and four whooping cranes (Grus americana), were studied. Eighteen sandhill cranes and the four whooping cranes were naturally infected with disseminated visceral coccidiosis (DVC). The remaining sandhill cranes were chicks experimentally infected with oocysts of Eimeria reichenowi and/or E. gruis; five chicks served as controls. There were no clinical signs attributed to respiratory infection. Necropsy of naturally infected adult birds revealed nodules in many organs, including the lung, air sacs, trachea and nares. Artificially infected sandhill cranes and the whooping crane chicks that died from DVC had congestion and consolidated areas in the lung with frothy fluid in the airways. Grossly visible nodules were observed from 10 days postinoculation. Granulomatous pneumonia and tracheitis were observed with light microscopy. Lesions were associated with merogonic and gametogonic stages of eimerian coccidia. Granulomas and granulomatous foci contained parasitized large mononuclear cells. Merogonic stages were seen in lymphoid cells by ultrastructural examination. Oocysts were observed in the trachea and bronchial mucosa and admixed with exudate in the airways, indicating that crane eimerians can complete their life cycle at these sites. Of the few eimeriid coccidia that have extraintestinal stages of development in birds and mammals, only the species in cranes complete their life cycle in both the digestive and respiratory tracts.

Journal of Wildlife Diseases↗
USGS1977

Duck nesting in intensively farmed areas of North Dakota

A study to determine the major factors limiting duck nesting and production on intensively farmed areas in eastern North Dakota was conducted from 1969 through 1974. A total of 186 duck nests was found during searches on 6,018 ha of upland. Nest density per km2 for 5 major habitat types was 20.2 in untilled upland, 3.7 in standing grain stubble, 1.6 in mulched grain stubble, 1.2 in summer fallow, and 1.1 in growing grain. Pintails ( Anas acuta ) nested in cultivated cropland types in greater prevalence than other duck species. Nest densities were 12 times greater on untilled upland (20.2/km2) than on annually tilled cropland (1.7/km2), and hatched-clutch densities were 16 times greater on untilled upland (4.8/km2) than on annually tilled cropland (0.3/km2). Hatching success was greater on untilled upland (25%) than on tilled cropland (17%). Of 186 nests found, 77 percent did not hatch; 76 percent of the failures were attributed to predators and 19 percent to farming operations. Poor quality nesting cover, the result of intensive land use practices, and nesting failures caused by machinery and predators mainly mammals, were the principal factors limiting duck nesting and production on intensively farmed areas.

North Dakota↗
USGS1997

Estimating temporary emigration using capture-recapture data with Pollock's robust design

Statistical inference for capture–recapture studies of open animal populations typically relies on the assumption that all emigration from the studied population is permanent. However, there are many instances in which this assumption is unlikely to be met. We define two general models for the process of temporary emigration: completely random and Markovian. We then consider effects of these two types of temporary emigration on Jolly–Seber estimators and on estimators arising from the full-likelihood approach to robust design data. Capture–recapture data arising from Pollock’s robust design provide the basis for obtaining unbiased estimates of demographic parameters in the presence of temporary emigration, and for estimating the probability of temporary emigration. We present a likelihood-based approach to dealing with temporary emigration that permits estimation under different models of temporary emigration and yields tests for completely random and Markovian emigration. In addition, we use the relationship between capture probability estimates based on closed and open models under completely random temporary emigration to derive three ad hoc estimators for the probability of temporary emigration. Two of these should be especially useful in situations where capture probabilities are heterogeneous among individual animals. Ad hoc and full-likelihood estimators are illustrated for small-mammal capture–recapture data sets. We believe that these models and estimators will be useful for testing hypotheses about the process of temporary emigration, for estimating demographic parameters in the presence of temporary emigration, and for estimating probabilities of temporary emigration. These latter estimates are frequently of ecological interest as indicators of animal movement and, in some sampling situations, as direct estimates of breeding probabilities and proportions.

Ecology↗
USGS2017

Evaluating methods to assess the body condition of female polar bears

An animal's body condition provides insight into its health, foraging success, and overall fitness. Measures of body composition including proportional fat content are useful indicators of condition. Isotopic dilution is a reliable non-destructive method for estimating the body composition of live mammals, but can require prolonged handling times. Alternatively, bioelectrical impedance analysis (BIA) has promise as a quick method for estimating the body composition of live mammals, but measurements can potentially be affected by field conditions. Body condition indices (BCI) and energy density models can also be used to assess body condition based on morphological measurements, but may not reliably reflect an animal's energy stores. Here we evaluate BIA, BCI, and an energy density model in measuring the energy stores of female polar bears ( Ursus maritimus ). We examine the relationship between total body fat (TBF) derived from isotopic dilution to these alternative methods for 9 female polar bears from 14 captures on the sea ice of the southern Beaufort Sea in April 2014–2016. An energy density model, BCI, and BIA-derived measures of TBF were poor predictors of TBF derived from isotopic dilution. We suggest energy density, BCI, and BIA may not be predictive of an animal's body fat at fine scales (e.g., among individuals within the same sex, reproductive status, and season). In particular, BIA should provide similar measures of body composition as isotopic dilution, but it failed to reliably measure TBF of individual bears. These limitations in the precision of body condition measures should be considered when planning future studies.

Ursus↗
USGS2013

Permeability of roads to movement of scrubland lizards and small mammals

A primary objective of road ecology is to understand and predict how roads affect connectivity of wildlife populations. Road avoidance behavior can fragment populations, whereas lack of road avoidance can result in high mortality due to wildlife-vehicle collisions. Many small animal species focus their activities to particular microhabitats within their larger habitat. We sought to assess how different types of roads affect the movement of small vertebrates and to explore whether responses to roads may be predictable on the basis of animal life history or microhabitat preferences preferences. We tracked the movements of fluorescently marked animals at 24 sites distributed among 3 road types: low-use dirt, low-use secondary paved, and rural 2-lane highway. Most data we collected were on the San Diego pocket mouse ( Chaetodipus fallax ), cactus mouse ( Peromyscus eremicus ), western fence lizard ( Sceloporus occidentalis ), orange-throated whiptail ( Aspidoscelis hyperythra ), Dulzura kangaroo rat ( Dipodomys simulans ) (dirt, secondary paved), and deer mouse (Peromyscus maniculatus) (highway only). San Diego pocket mice and cactus mice moved onto dirt roads but not onto a low-use paved road of similar width or onto the highway, indicating they avoidpaved road substrate. Both lizard species moved onto the dirt and secondary paved roads but avoided the rural 2-lane rural highway, indicating they may avoid noise, vibration, or visual disturbance from a steady flow of traffic. Kangaroo rats did not avoid the dirt or secondary paved roads. Overall, dirt and secondary roads were more permeable to species that prefer to forage or bask in open areas of their habitat, rather than under the cover of rocks or shrubs. However, all study species avoided the rural 2-lane highway. Our results suggest that microhabitat use preferences and road substrate help predict species responses to low-use roads,but roads with heavy traffic may deter movement of a much wider range of small animal species.

California↗
USGS1999

Productivity, diets, and environmental contaminants in nesting bald eagles from the Aleutian Archipelago

We studied productivity, diets, and environmental contaminants in nesting bald eagles from the western Aleutian Islands, Alaska, USA, during the summers of 1993 and 1994. Productivity on Adak, Tanaga, and Amchitka Islands ranged from 0.88 to 1.24 young produced per occupied site and was comparable to that of healthy populations in the lower 48 United States. However, productivity on Kiska Island was depressed, averaging 0.67 young per occupied site. The lower reproductive success on Kiska was associated with elevated levels of dichlorodiphenyldichloroethylene and other organochlorine pesticides. Many of the organochlorine pesticides were elevated in bald eagle eggs from the four islands, but concentrations of these contaminants and Hg were significantly higher in eggs from Kiska Island than in eggs from the other islands. In contrast, polychlorinated biphenyl concentrations were higher in eggs from Adak, Amchitka, and Kiska (where military facilities have been installed) than in those from Tanaga (which has had little military activity). The most likely source of these contaminants in bald eagles was from their diets, which were variable spatially and temporally. Fish made up most (56%) of the eagles' diet on Adak and Tanaga Islands, followed by birds (25%) and mammals (19%). In contrast, birds comprised the majority (60%) of bald eagle diets on Amchitka and Kiska Islands, followed by mammals (30%) and fish (10%). The high proportion of seabirds in the diet of eagles from Kiska Island could be the major source of organochlorine and Hg contamination. Elevated concentrations of organochlorines in bald eagle eggs from the Aleutian Archipelago was surprising, because of the distance to agricultural areas. The results indicate that these contaminants can be transported long distances and affect wildlife populations in remote and pristine areas. We also discuss potential sources and transport mechanisms of these contaminants to the Aleutian Islands.

Environmental Toxicology and Chemistry↗
USGS2004

Cruise Report for G1-03-GM, USGS Gas Hydrates Cruise, R/V Gyre, 1-14 May 2003, Northern Gulf of Mexico

This report gives a summary of the field program and instrumentation used on the R/V Gyre in the Gulf of Mexico in May, 2003, to collect multichannel seismic data in support of USGS and Department of Energy gas hydrate studies. Tabulated statistics, metadata, figures and maps are included to show the breadth of data collected and preliminary interpretations made during the field program. Geophysical data collected during this cruise will be released in a separate report. At the start of the cruise, three test lines were run to compare different source configurations in order to optimize data quality for the objectives of the cruise. The source chosen was the 13/13 in3 Generator-Injector (GI) Gun. Following these tests, a total of 101 lines (approximately 1033 km) of 24-channel high-resolution seismic reflection data were collected in the northern Gulf of Mexico. 59 lines (about 600 km) were collected in and around lease block Keathley Canyon 195. An additional 4 lines (85 km) provided a seismic tie between the Keathley Canyon data and USGS multichannel data collected in 1999. About 253 km of data were collected along 35 short lines in and around lease block Atwater Valley 14 on the floor of the Mississippi Canyon. Three lines (53 km) completed the cruise and provided a seismic tie to USGS multichannel data collected in 1998. Two on-board trained marine-mammal observers fulfilled the requirements determined by NOAA/National Marine Fisheries Service to avoid incidental harassment of marine mammals as established in the Marine Mammal Protection Act (MMPA). A total of three species of dolphins were observed during the cruise and one basking shark. No sperm whales were sighted. During the cruise, seismic operations were not delayed or terminated because of marine mammal activity.

Open-File Report↗
USGS1996

Organic geochemistry applied to environmental assessments of Prince William Sound, Alaska, after the Exxon Valdez oil spill—a review

Organic geochemistry played a major role in the environmental assessments conducted following the Exxon Valdez oil spill, which occurred on March 24, 1989, and released about 258,000 bbls (41 million liters) of Alaska North Slope crude oil into Prince William Sound. Geochemical analyses of more than 15,000 sediment, tar, and biological samples and about 5000 water samples provide the largest database yet collected on oil-spill chemistry, and we review the results here. The marine environment of the Sound has a complex background of petrogenic, pyrogenic, and biogenic hydrocarbons from natural and anthropogenic sources. Geochemical evaluation of the fate and effects of the spilled oil required that this oil and its residues be distinguished from the background. A variety of molecular and isotopic techniques were employed to identify various hydrocarbon sources and to distinguish quantitatively among mixed sources in the samples. Although the specific criteria used to distinguish multiple sources in the region affected by the Exxon Valdez spill are not necessarily applicable to all spill situations, the principles that governed their selection are. Distributions of polycyclic aromatic hydrocarbons (PAH) and dibenzothiophenes distinguish Exxon Valdez oil and its weathered residues from background hydrocarbons in benthic sediments. Ratios of C 2 -dibenzothiophene C 2 -phenanthrene "> C 2 -dibenzothiopheneC 2 -phenanthrene and C 3 -dibenzothiophene C 3 -phenanthrene "> C 3 -dibenzothiopheneC 3 -phenanthrene were particularly useful. Carbon isotopes and terpane distributions distinguished Exxon Valdez residues found on shorelines from tars from other sources. Diesel and diesel soot were identified by the absence of alkylated chrysenes and a narrow distribution of n -alkanes, whereas pyrogenic products were distinguished by the dominance of 4- to 6-ring PAH over 2- to 3-ring PAH and by the dominance of non-alkylated over alkylated homologues of each PAH series. The presence of 18α(H)-oleanane in benthic sediments, coupled with its absence in Exxon Valdez oil and its residues, confirm another petrogenic source. Results of geochemical studies suggest that the petrogenic component in the background of benthic sediments is derived from oil seeps in the eastern Gulf of Alaska. In 1990 and 1991, Exxon Valdez residues, generally forming a small increment to the pre-spill background, were found to be only sporadically distributed in some shallow, near shore sediments adjacent to shorelines that had been heavily oiled in 1989. In 1994, occurrences of Exxon Valdez tars on shoreline surfaces were rare, although residues could be found buried in shoreline sediments at some isolated locations along the spill path where they were protected from wave action. Spilled oil residues collected 16 months after the spill were degraded, on average, by nearly 50%. Shoreline residues from sources other than the spill were also identified and are widespread throughout the Sound. These residues include (1) geochemically distinct tars and oils imported from California oil fields to Alaska for fuel and construction purposes prior to the discovery of the Cook Inlet and North Slope oil fields, (2) diesel and diesel soot, and (3) more highly refined products. Of the more than 2700 chemical analyses of biological samples of higher life forms (fish, birds, and mammals) about 150 (6%) indicate recognizable residues of Exxon Valdez oil, which were identified by their distribution of polycyclic aromatic hydrocarbons (PAH). Most of these samples (138) were collected in 1989 and most were associated with external surfaces or the gastrointestinal tract. Rarely do internal tissues or fluids contain recognizable fingerprints of spilled oil. This observation includes samples from marine mammals that were visibly oiled externally. Other hydrocarbon sources, including diesel and a non-petroleum artifact that occurs when concentrations of individual PAH are at or near their method detection limit, are also identified in biological samples.

Alaska↗
USGS2012

Assessing sloth bears as surrogates for carnivore conservation in Sri Lanka

Bears are large, charismatic mammals whose presence often garners conservation attention. Because healthy bear populations typically require large, contiguous areas of habitat, land conservation actions often are assumed to benefit co-occurring species, including other mammalian carnivores. However, we are not aware of an empirical test of this assumption. We used remote camera data from 2 national parks in Sri Lanka to test the hypothesis that the frequency of detection of sloth bears (Melursus ursinus) is associated with greater richness of carnivore species. We focused on mammalian carnivores because they play a pivotal role in the stability of ecological communities and are among Sri Lanka's most endangered species. Seven of Sri Lanka's carnivores are listed as endangered, vulnerable, or near threatened, and little empirical information exists on their status and distribution. During 2002–03, we placed camera traps at 152 sites to document carnivore species presence. We used Poisson regression to develop predictive models for 3 categories of dependent variables: species richness of (1) all carnivores, (2) carnivores considered at risk, and (3) carnivores of least conservation concern. For each category, we analyzed 8 a priori models based on combinations of sloth bear detections, sample year, and study area and used Akaike's information criterion (AIC c ) to test our research hypothesis. We detected sloth bears at 55 camera sites and detected 13 of Sri Lanka's 14 Carnivora species. Species richness of all carnivores showed positive associations with the number of sloth bear detections, regardless of study area. Sloth bear detections were also positively associated with species richness of carnivores at risk across both study years and study areas, but not with species richness of common carnivores. Sloth bears may serve as a valuable surrogate species whose habitat protection would contribute to conservation of other carnivores in Sri Lanka.

Ursus↗
USGS2024

Ecological function maintained despite mesomammal declines

Mid-sized mammals (i.e., mesomammals) fulfill important ecological roles, serving as essential scavengers, predators, pollinators, and seed dispersers in the ecosystems they inhabit. Consequently, declines in mesomammal populations have the potential to alter ecological processes and fundamentally change ecosystems. However, ecosystems characterized by high functional redundancy, where multiple species can fulfil similar ecological roles, may be less impacted by the loss of mesomammals and other vertebrates. The Greater Everglades Ecosystem in southern Florida is a historically biodiverse region that has recently been impacted by multiple anthropogenic threats, most notably the introduction of the Burmese python ( Python molurus bivittatus ) . Since pythons became established, mesomammal populations have become greatly reduced. To assess whether these declines in mesomammals have affected two critical ecosystem functions—scavenging and frugivory—we conducted experiments in areas where mesomammals were present and absent. We did not observe significant differences in scavenging or frugivory efficiency in areas with and without mesomammals, but we did observe significant differences in the communities responsible for scavenging and frugivory. Despite the observed evidence of redundancy, the changes in community composition could potentially lead to indirect consequences on processes like seed dispersal and disease dynamics within this ecosystem, emphasizing the need for further study.

Florida↗
USGS2012

2008 Joint United States-Canadian program to explore the limits of the Extended Continental Shelf aboard the U.S. Coast Guard cutter Healy --Cruise HLY0806

In September 2008, the U.S. Geological Survey (USGS), in cooperation with Natural Resources Canada, Geological Survey of Canada (GSC), conducted bathymetric and geophysical surveys in the Arctic Beaufort Sea aboard the U.S. Coast Guard cutter USCGC Healy . The principal objective of this mission to the high Arctic was to acquire data in support of delineation of the outer limits of the U.S. and Canadian Extended Continental Shelf (ECS) in the Arctic Ocean in accordance with the provisions of Article 76 of the Law of the Sea Convention. The Healy was accompanied by the Canadian Coast Guard icebreaker Louis S. St- Laurent . The science parties on the two vessels consisted principally of staff from the USGS ( Healy ), and the GSC and the Canadian Hydrographic Service ( Louis ). The crew included marine mammal and Native-community observers, ice observers, and biologists conducting research of opportunity in the Arctic Ocean. The joint survey proved an unqualified success. The Healy collected 5,528 km of swath (multibeam) bathymetry (38,806 km 2 ) and CHIRP subbottom profile data, with accompanying marine gravity measurements. The Louis acquired 2,817 km of multichannel seismic (airgun) deep-penetration reflection-profile data along 12 continuous lines, as well as 35 sonobuoy refraction stations and accompanying single-beam bathymetry. The coordinated efforts of the two vessels resulted in seismic-reflection profile data of much higher quality and continuity than if the data had been acquired with a single vessel alone. Equipment failure rate of the seismic equipment gear aboard the Louis was greatly improved with the advantage of having a leading icebreaker. When ice conditions proved too severe to deploy the seismic system, the Louis led the Healy , resulting in much improved quality of the swath bathymetry and CHIRP sub-bottom data in comparison with data collected by the Healy in the lead or working alone. Ancillary science objectives, including ice observations, deployment of ice-monitoring buoys and water-column sampling for biologic (phytoplankton) studies, were also successfully accomplished.

Open-File Report↗
USGS2021

Lipidomics reveals specific lipid molecules associated with cold stress syndrome in the Florida manatee (Trichechus manatus latirostris)

Cold stress syndrome (CSS) in the Florida manatee ( Trichechus manatus latirostris) results in perturbations to many physiological pathways, often leading to further illness or death. In this study, we applied a non-targeted lipidomics approach with ultra-high performance liquid chromatography and high-resolution tandem mass spectrometry to characterize changes related to CSS in the lipidomic profiles of manatee plasma. Lipidomic analyses were conducted on healthy manatee (control) and cold-exposed manatee plasma samples with varying concentrations of Serum Amyloid A (SAA), an acute-phase protein that is associated with inflammatory disease. Control manatees ( n = 10) were compared to all manatees exposed to cold temperatures ( n = 17), and a subset of those manatees with SAA values > 120 μg/mL ( n = 9). Increased SAA values were associated with higher levels of various acylcarnitine lipids, while several triacylglycerols and oxidized triacylglycerols were significantly lower in manatees with cold exposure. These identified lipids are critical molecules involved in the maintenance of energy homeostasis and could potentially be examined in conjunction with current physical parameters to characterize cold stress. The ability to detect such differences highlights the addition of lipidomics as a valuable tool in understanding cold stress and potentially other illnesses in manatees. Further investigation into the function of the altered lipids could greatly increase our understanding of lipid metabolism in physiologically stressed manatees as well as other marine mammals and inform future management recovery strategies.

Marine Biology↗
USGS2017

Spring fasting behavior in a marine apex predator provides an index of ecosystem productivity

The effects of declining Arctic sea ice on local ecosystem productivity are not well understood but have been shown to vary inter-specifically, spatially, and temporally. Because marine mammals occupy upper trophic levels in Arctic food webs, they may be useful indicators for understanding variation in ecosystem productivity. Polar bears ( Ursus maritimus ) are apex predators that primarily consume benthic and pelagic-feeding ice-associated seals. As such, their productivity integrates sea ice conditions and the ecosystem supporting them. Declining sea ice availability has been linked to negative population effects for polar bears but does not fully explain observed population changes. We examined relationships between spring foraging success of polar bears and sea ice conditions, prey productivity, and general patterns of ecosystem productivity in the Beaufort and Chukchi Seas (CSs). Fasting status (≥7 days) was estimated using serum urea and creatinine levels of 1,448 samples collected from 1,177 adult and subadult bears across three subpopulations. Fasting increased in the Beaufort Sea between 1983–1999 and 2000–2016 and was related to an index of ringed seal body condition. This change was concurrent with declines in body condition of polar bears and observed changes in the diet, condition and/or reproduction of four other vertebrate consumers within the food chain. In contrast, fasting declined in CS polar bears between periods and was less common than in the two Beaufort Sea subpopulations consistent with studies demonstrating higher primary productivity and maintenance or improved body condition in polar bears, ringed seals, and bearded seals despite recent sea ice loss in this region. Consistency between regional and temporal variation in spring polar bear fasting and food web productivity suggests that polar bears may be a useful indicator species. Furthermore, our results suggest that spatial and temporal ecological variation is important in affecting upper trophic-level productivity in these marine ecosystems.

Global Change Biology↗