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USGS2025

Nocardia cyriacigeorgica in a Mallard (Anas platyrhynchos) from Arizona, USA

Nocardia spp. are opportunistic pathogens of humans, domestic animals, and wildlife that can cause high levels of morbidity and mortality. Here, we present a unique case of nocardial airsacculitis in a free-ranging mallard ( Anas platyrhynchos ) from Arizona, USA, and compare it to the hosts, geographic distribution, diagnostic methodology, and infection site of known nocardiosis cases in birds. A gross necropsy, histopathology, and bacterial culture were performed. There were no gross findings associated with the nocardiosis. Histopathology showed multiple granulomas expanding the air sac with intralesional filamentous bacteria that were Grocott’s methenamine silver-positive, Fite–Faraco and Ziehl–Neelsen acid-fast, positive with the Periodic acid–Schiff reaction, and variably Gram-positive. The organism was isolated in culture and identified as Nocardia cyriacigeorgica based on the sequencing of a 463 bp portion of the 16S rRNA gene. While reports of nocardiosis in the class Aves are rare and some are possibly misdiagnosed due to limited diagnostics, cases are reported globally, sometimes resulting in epizootics. More information is needed to understand whether immunosuppression plays a role in disease development in birds. Known to be an emerging pathogen in humans, N. cyriacigeorgica can be considered as a differential diagnosis for pulmonary and potentially cutaneous or disseminated infections in birds.

Arizona↗

USGS2012

Distribution of Cu, Co, As, and Fe in mine waste, sediment, soil, and water in and around mineral deposits and mines of the Idaho Cobalt Belt, USA

The distribution of Cu, Co, As and Fe was studied downstream from mines and deposits in the Idaho Cobalt Belt (ICB), the largest Co resource in the USA. To evaluate potential contamination in ecosystems in the ICB, mine waste, stream sediment, soil, and water were collected and analyzed for Cu, Co, As and Fe in this area. Concentrations of Cu in mine waste and stream sediment collected proximal to mines in the ICB ranged from 390 to 19,000 μg/g, exceeding the USEPA target clean-up level and the probable effect concentration (PEC) for Cu of 149 μg/g in sediment; PEC is the concentration above which harmful effects are likely in sediment dwelling organisms. In addition concentrations of Cu in mine runoff and stream water collected proximal to mines were highly elevated in the ICB and exceeded the USEPA chronic criterion for aquatic organisms of 6.3 μg/L (at a water hardness of 50 mg/L) and an LC50 concentration for rainbow trout of 14 μg/L for Cu in water. Concentrations of Co in mine waste and stream sediment collected proximal to mines varied from 14 to 7400 μg/g and were highly elevated above regional background concentrations, and generally exceeded the USEPA target clean-up level of 80 μg/g for Co in sediment. Concentrations of Co in water were as high as in 75,000 μg/L in the ICB, exceeding an LC50 of 346 μg/L for rainbow trout for Co in water by as much as two orders of magnitude, likely indicating an adverse effect on trout. Mine waste and stream sediment collected in the ICB also contained highly elevated As concentrations that varied from 26 to 17,000 μg/g, most of which exceeded the PEC of 33 μg/g and the USEPA target clean-up level of 35 μg/g for As in sediment. Conversely, most water samples had As concentrations that were below the 150 μg/L chronic criterion for protection of aquatic organisms and the USEPA target clean-up level of 14 μg/L. There is abundant Fe oxide in streams in the ICB and several samples of mine runoff and stream water exceeded the chronic criterion for protection of aquatic organisms of 1000 μg/L for Fe. There has been extensive remediation of mined areas in the ICB, but because some mine waste remaining in the area contains highly elevated Cu, Co, As and Fe, inhalation or ingestion of mine waste particulates may lead to human exposure to these elements.

Idaho↗

USGS2011

Applying monitoring, verification, and accounting techniques to a real-world, enhanced oil recovery operational CO2 leak

The use of carbon dioxide (CO 2 ) for enhanced oil recovery (EOR) is being tested for oil fields in the Illinois Basin, USA. While this technology has shown promise for improving oil production, it has raised some issues about the safety of CO 2 injection and storage. The Midwest Geological Sequestration Consortium (MGSC) organized a Monitoring, Verification, and Accounting (MVA) team to develop and deploy monitoring programs at three EOR sites in Illinois, Indiana, and Kentucky, USA. MVA goals include establishing baseline conditions to evaluate potential impacts from CO 2 injection, demonstrating that project activities are protective of human health and the environment, and providing an accurate accounting of stored CO 2 . This paper focuses on the use of MVA techniques in monitoring a small CO 2 leak from a supply line at an EOR facility under real-world conditions. The ability of shallow monitoring techniques to detect and quantify a CO 2 leak under real-world conditions has been largely unproven. In July of 2009, a leak in the pipe supplying pressurized CO 2 to an injection well was observed at an MGSC EOR site located in west-central Kentucky. Carbon dioxide was escaping from the supply pipe located approximately 1 m underground. The leak was discovered visually by site personnel and injection was halted immediately. At its largest extent, the hole created by the leak was approximately 1.9 m long by 1.7 m wide and 0.7 m deep in the land surface. This circumstance provided an excellent opportunity to evaluate the performance of several monitoring techniques including soil CO 2 flux measurements, portable infrared gas analysis, thermal infrared imagery, and aerial hyperspectral imagery. Valuable experience was gained during this effort. Lessons learned included determining (1) hyperspectral imagery was not effective in detecting this relatively small, short-term CO 2 leak, (2) even though injection was halted, the leak remained dynamic and presented a safety risk concern during monitoring activities and, (3) the atmospheric and soil monitoring techniques used were relatively cost-effective, easily and rapidly deployable, and required minimal manpower to set up and maintain for short-term assessments. However, characterization of CO 2 distribution near the land surface resulting from a dynamic leak with widely variable concentrations and fluxes was challenging.

Illinois, Indiana, and Kentucky↗

USGS2016

Dragonfly Mercury Project—A citizen science driven approach to linking surface-water chemistry and landscape characteristics to biosentinels on a national scale

Mercury is a globally distributed pollutant that threatens human and ecosystem health. Even protected areas, such as national parks, are subjected to mercury contamination because it is delivered through atmospheric deposition, often after long-range transport. In aquatic ecosystems, certain environmental conditions can promote microbial processes that convert inorganic mercury to an organic form (methylmercury). Methylmercury biomagnifies through food webs and is a potent neurotoxicant and endocrine disruptor. The U.S. Geological Survey (USGS), the University of Maine, and the National Park Service (NPS) Air Resources Division are working in partnership at more than 50 national parks across the United States, and with citizen scientists as key participants in data collection, to develop dragonfly nymphs as biosentinels for mercury in aquatic food webs. To validate the use of these biosentinels, and gain a better understanding of the connection between biotic and abiotic pools of mercury, this project also includes collection of landscape data and surface-water chemistry including mercury, methylmercury, pH, sulfate, and dissolved organic carbon and sediment mercury concentration. Because of the wide geographic scope of the research, the project also provides a nationwide “snapshot” of mercury in primarily undeveloped watersheds.

Fact Sheet↗

USGS1996

Hydrogeology of, and ground-water flow in, a valley-fill and carbonate-rock aquifer system near Long Valley in the New Jersey Highlands

The hydrogeology of and ground-water flow in a valley-fill and carbonate-rock aquifer system were evaluated by using numerical-modeling techniques and geochemical interpretations to address concerns about the adequacy of the aquifer system to meet increasing demand for water. The study was conducted during 1987-90 by the U.S. Geological Survey, in cooperation with the New Jersey Department of Environmental Protection and Energy. The effects of recent and anticipated ground-water withdrawals on water levels, stream base flows, and water budgets were estimated. Simulation results indicate that recent withdrawals of 4.7 million gallons per day have resulted in water-level declines of up to 35 feet. Under conditions of increases in withdrawals of 121 percent, water levels would decline up to an additional 28 feet. The magnitude of predicted average base-flow depletion, when compared with historic low flows, indicates that projected increases in withdrawals may substantially deplete seasonal low flow of Drakes Brook and South Branch Raritan River. Results of a water-budget analysis indicate that the sources of water to additional supply wells would include leakage from the overlying valley-fill aquifer and induced leakage of surface water into the aquifer system. Results of water-quality analyses indicate that human activities are affecting the quality of the ground water. With the exception of an elevated iron concentration in water from one well, concentrations of inorganic constituents in water from 75 wells did not exceed New Jersey primary or secondary drinking-water regulations. Volatile organic compounds were detected in water from several wells; in two samples, concentrations of specific compounds exceeded drinking-water regulations.

Water-Resources Investigations Report↗

USGS2021

Wetlands

During the last decades, soil organic carbon (SOC) attracted the attention of a much wider array of specialists beyond agriculture and soil science, as it was proven to be one of the most crucial components of the earth’s climate system, which has a great potential to be managed by humans. Soils as a carbon pool are one of the key factors in several Sustainable Development Goals, in particular Goal 15, “Protect, restore and promote sustainable use of terrestrial ecosystems, sustainably manage forests, combat desertification and halt and reverse land degradation and halt biodiversity loss” with the SOC stock being explicitly cited in Indicator 15.3.1. This technical manual is the first attempt to gather, in a standardized format, the existing data on the impacts of the main soil management practices on SOC content in a wide array of environments, including the advantages, drawbacks, and constraints. This manual presents different sustainable soil management (SSM) practices at different scales and in different contexts, supported by case studies that have been shown with quantitative data to have a positive effect on SOC stocks and successful experiences of SOC sequestration in practical field applications Volume 2 includes a description of hot spots of SOC stocks. This manual defines hot spots of SOC as areas that represent a proportionally little of the global land surface but on which SOC storage is highly effective; bright spots as large land areas with low SOC stocks per km2 that represent a potential for further carbon sequestration.

Report↗

USGS2010

The plight of the bees

The loss of biodiversity is a trend that is garnering much concern. As organisms have evolved mutualistic and synergistic relationships, the loss of one or a few species can have a much wider environmental impact. Since much pollination is facilitated by bees, the reported colony collapse disorder has many worried of widespread agricultural fallout and thus deleterious impact on human foodstocks. In this Feature, Spivak et al. review what is known of the present state of bee populations and provide information on how to mitigate and reverse the trend.

Environmental Science & Technology↗

USGS2012

Presence of selected chemicals of emerging concern in water and bottom sediment from the St. Louis River, St. Louis Bay, and Superior Bay, Minnesota and Wisconsin, 2010

The St. Louis Bay of Lake Superior receives substantial urban runoff, wastewater treatment plant effluent, and industrial effluent. In 1987, the International Joint Commission designated the St. Louis Bay portion of the lower St. Louis River as one of the Great Lakes Areas of Concern. Concerns exist about the potential effects of chemicals of emerging concern on aquatic biota because many of these chemicals, including endocrine active chemicals, have been shown to affect the endocrine systems of fish. To determine the occurrence of chemicals of emerging concern in the St. Louis River, the St. Louis Bay, and Superior Bay, the U.S. Geological Survey in cooperation with the Minnesota Pollution Control Agency and the Wisconsin Department of Natural Resources collected water and bottom-sediment samples from 40 sites from August through October 2010. The objectives of this study were to (1) identify the extent to which chemicals of emerging concern, including pharmaceuticals, hormones, and other organic chemicals, occur in the St. Louis River, St. Louis Bay, and Superior Bay, and (2) identify the extent to which the chemicals may have accumulated in bottom sediment of the study area. Samples were analyzed for selected wastewater indicators, hormones, sterols, bisphenol A , and human-health pharmaceuticals. During this study, 33 of 89 chemicals of emerging concern were detected among all water samples collected and 56 of 104 chemicals of emerging concern were detected in bottom-sediment samples. The chemical N,N -diethyl- meta -toluamide (DEET) was the most commonly detected chemical in water samples and 2,6-dimethylnaphthalene was the most commonly detected chemical in bottom-sediment samples. In general, chemicals of emerging concern were detected at a higher frequency in bottom-sediment samples than in water samples. Estrone (a steroid hormone) and hexahydrohexamethyl cyclopentabensopyran (a synthetic fragrance) were the most commonly detected endocrine active chemicals in water samples; beta -sitosterol (a plant sterol), estrone, and 4- tert -octylphenol (an alkylphenol) were the most commonly detected endocrine active chemicals in bottom-sediment samples. The greater detection frequency of chemicals in bottom-sediment samples compared to the detection frequency in water samples indicates that bottom sediment is an important sink for chemicals of emerging concern. At least one polycyclic aromatic hydrocarbon was detected in every sample; and in most samples, all nine polycyclic aromatic hydrocarbons included in analyses were detected. Bottom sediment collected from Superior Bay had the most polycyclic aromatic hydrocarbon detections of the sediment sampling locations.

Minnesota;Wisconsin↗

USGS2023

Automated georeferencing and feature extraction of geologic maps and mineral sites

The predictive power of mineral prospectivity analysis depends on high quality, spatially accurate, analysis-ready datasets. Of paramount importance are geologic maps and mineral site data, but the state of readiness for utilizing these datasets remains sub-optimal for advanced computational techniques. As the U.S. Geological Survey (USGS) fulfils its mission to map the distribution of critical mineral commodities, non-georeferenced maps held within historical collections represent rich sources of input data. Through a series of machine learning challenges organized by the Defense Advanced Research Projects Agency (DARPA) in collaboration with the USGS, significant progress has been made in accelerating data ingestion, processing, and preparation tasks that enable mineral prospectivity mapping and mineral resource assessment workflows. Specifically, two tasks that previously required time-intensive human effort, 1) georeferencing map images, and 2) legend-based feature extraction from map images, are discussed.

Conference Paper↗

USGS2016

Organizing environmental flow frameworks to meet hydropower mitigation needs

The global recognition of the importance of natural flow regimes to sustain the ecological integrity of river systems has led to increased societal pressure on the hydropower industry to change plant operations to improve downstream aquatic ecosystems. However, a complete reinstatement of natural flow regimes is often unrealistic when balancing water needs for ecosystems, energy production, and other human uses. Thus, stakeholders must identify a prioritized subset of flow prescriptions that meet ecological objectives in light of realistic constraints. Yet, isolating aspects of flow regimes to restore downstream of hydropower facilities is among the greatest challenges of environmental flow science due, in part, to the sheer volume of available environmental flow tools in conjunction with complex negotiation-based regulatory procedures. Herein, we propose an organizational framework that structures information and existing flow paradigms into a staged process that assists stakeholders in implementing environmental flows for hydropower facilities. The framework identifies areas where regulations fall short of the needed scientific process, and provide suggestions for stakeholders to ameliorate those situations through advanced preparation. We highlight the strengths of existing flow paradigms in their application to hydropower settings and suggest when and where tools are most applicable. Our suggested framework increases the effectiveness and efficiency of the e-flow implementation process by rapidly establishing a knowledge base and decreasing uncertainty so more time can be devoted to filling knowledge gaps. Lastly, the framework provides the structure for a coordinated research agenda to further the science of environmental flows related to hydropower environments.

Environmental Management↗

USGS1980

Age, sex, reproduction, and spatial organization of lynxes colonizing northeastern Minnesota

From 1972 through 1978, lynxes ( Felis lynx ) emigrating from Canada were studied in northeastern Minnesota. Fourteen individuals were radio-tracked, 8 were ear-tagged, and 49 carcasses were examined. Sex ratios of the samples were equal during the first years of the study, but females predominated later. At least half of the radio-tagged lynxes were killed by humans; no natural mortality was detected. Home range sizes ranged from 51 to 122 km 2 for females and 145 to 243 km 2 for males, up to 10 times the sizes of those reported by other workers. Ranges of females tended to overlap. Males and females appeared to be segregated in the population.

Journal of Mammalogy↗

USGS2023

Chemical characteristics of wildfire ash across the globe and their environmental and socio-economic implications

The mobilisation of potentially harmful chemical constituents in wildfire ash can be a major consequence of wildfires, posing widespread societal risks. Knowledge of wildfire ash chemical composition is crucial to anticipate and mitigate these risks. Here we present a comprehensive dataset on the chemical characteristics of a wide range of wildfire ashes (42 types and a total of 148 samples) from wildfires across the globe and examine their potential societal and environmental implications. An extensive review of studies analysing chemical composition in ash was also performed to complement and compare our ash dataset. Most ashes in our dataset had an alkaline reaction (mean pH 8.8, ranging between 6 – 11.2). Important constituents of wildfire ash were organic carbon (mean: 204 g kg-1), calcium, aluminium, and iron (mean: 47.9, 17.9 and 17.1 g kg-1). Mean nitrogen and phosphorus ranged between 1 - 25 g kg-1, and between 0.2 to 9.9 g kg-1, respectively. The largest concentrations of metals of concern for human and ecosystem health were observed for manganese (mean: 1488 mg kg-1; three ecosystems > 1000 mg kg-1), zinc (mean: 181 mg kg-1; two ecosystems > 500 mg kg-1) and lead (mean: 66.9 mg kg-1; two ecosystems > 200 mg kg-1). Burn severity and sampling timing were key factors influencing ash chemical characteristics like pH, carbon and nitrogen concentrations. The highest readily dissolvable fractions (as a % of ash dry weight) in water were observed for sodium (18%) and magnesium (11.4%). Although concentrations of elements of concern were very close to, or exceeded international contamination standards in some ashes, the actual effect of ash will depend on factors like ash loads and the dilution into environmental matrices such as water, soil and sediment. Our approach can serve as an initial methodological standardisation of wildfire ash sampling and chemical analysis protocols.

Environment International↗

USGS2025

Select elements of concern in surface water of three hydrologic basins (Delaware River, Illinois River, and Upper Colorado River)—Data screening for the development of spatial and temporal models

The report focuses on the screening of previously published concentration data associated with 12 elements of concern (aluminum, arsenic, cadmium, chromium, copper, iron, mercury, manganese, lead, selenium, uranium, and zinc) measured in stream surface waters of three hydrologic basins (Delaware River Basin, Illinois River Basin, and the Upper Colorado River Basin). The purpose of this analysis is to determine what subsets of the original dataset (containing more than 1,500,000 observations) may be most suitable for each of two types of modeling efforts. The first type of modeling envisions a machine learning approach to determine which geospatial attributes are most significant in describing the spatial distribution of elemental concentrations within a basin. The second type of modeling envisions a stepwise regression approach to develop multivariable models that can be used to determine high resolution time-series estimates of elemental concentrations or loads at discrete U.S. Geological Survey real-time stream surface water sites. These site-specific temporal models are based on continuous measurements of available discharge and (or) in situ sensor data (temperature, pH, turbidity, dissolved oxygen, specific conductance, and (or) fluorescent dissolved organic matter) as the explanatory variables. The data screening for both model types considered historical trends in analytical methods and detection quantitation limits, the extent of censored data, data density, and environmental relevance with respect to three U.S. Environmental Protection Agency water quality thresholds (drinking water guidelines, human health criteria, and aquatic life criteria). The result of this analysis was the production of a final list of potential models deemed suitable for further development based upon the data exclusion (or inclusion) scheme developed herein for each model type. In both cases, the final models included mostly the three crustal elements (iron, manganese, and aluminum) that are found at comparatively high concentrations in surface water, whereas most of the more pernicious elements were excluded from the final model lists owing to various data limitations. The one exception to this was arsenic, for which the existing data were sufficient at three U.S. Geological Survey real-time sites for potential further development of time-series models.

Colorado, Delaware, Illinois, Indiana, Maryland, N↗

USGS2003

Environmental Setting and the Effects of Natural and Human-Related Factors on Water Quality and Aquatic Biota, Oahu, Hawaii

The island of Oahu is the third largest island of the State of Hawaii, and is formed by the eroded remnants of the Waianae and Koolau shield volcanoes. The landscape of Oahu ranges from a broad coastal plain to steep interior mountains. Rainfall is greatest in the mountainous interior parts of the island, and lowest near the southwestern coastal areas. The structure and form of the two volcanoes in conjunction with processes that have modified the original surfaces of the volcanoes control the hydrologic setting. The rift zones of the volcanoes contain dikes that tend to impede the flow of ground water, leading to high ground-water levels in the dike-impounded ground-water system. In the windward (northeastern) part of the island, dike-impounded ground-water levels may reach the land surface in stream valleys, resulting in ground-water discharge to streams. Where dikes are not present, the volcanic rocks are highly permeable, and a lens of freshwater overlies a brackish-water transition zone separating the freshwater from saltwater. Ground water discharges to coastal springs and streams where the water table in the freshwater-lens system intersects the land surface. The Waianae and Koolau Ranges have been deeply dissected by numerous streams. Streams originate in the mountainous interior areas and terminate at the coast. Some streams flow perennially throughout their entire course, others flow perennially over parts of their course, and the remaining streams flow during only parts of the year throughout their entire course. Hawaiian streams have relatively few native species compared to continental streams. Widespread diverse orders of insects are absent from the native biota, and there are only five native fish, two native shrimp, and a few native snails. The native fish and crustaceans of Hawaii's freshwater systems are all amphidromous (adult lives are spent in streams, and larval periods as marine or estuarine zooplankton). During the 20th century, land-use patterns on Oahu reflected increases in population and decreases in large-scale agricultural operations over time. The last two remaining sugarcane plantations on Oahu closed in the mid-1990's, and much of the land that once was used for sugarcane now is urbanized or used for diversified agriculture. Although two large pineapple plantations continue to operate in central Oahu, some of the land previously used for pineapple cultivation has been urbanized. Natural and human-related factors control surface- and ground-water quality and the distribution and abundance of aquatic biota on Oahu. Natural factors that may affect water quality include geology, soils, vegetation, rainfall, ocean-water quality, and air quality. Human-related factors associated with urban and agricultural land uses also may affect water quality. Ground-water withdrawals may cause saltwater intrusion. Pesticides and fertilizers that were used in agricultural or urban areas have been detected in surface and ground water on Oahu. In addition, other organic compounds associated with urban uses of chemicals have been detected in surface and ground water on Oahu. The effects of urbanization and agricultural practices on instream and riparian areas in conjunction with a proliferation of nonnative fish and crustaceans have resulted in a paucity of native freshwater macrofauna on Oahu. A variety of pesticides, nutrients, and metals are associated with urban and agricultural land uses, and these constituents can affect the fish and invertebrates that live in the streams.

Water-Resources Investigations Report↗

USGS1999

Arsenic in ground water of the Willamette Basin, Oregon

In response to increasing demands on ground-water resources in the Willamette Basin, Oregon (fig. 1), the Oregon Water Resources Department (OWRD) and the U.S. Geological Survey (USGS) began a cooperative study of the basin’s ground-water resources in 1996. This study was designed to increase the current understanding of the ground-water resource, and to better characterize the distribution of naturally occurring poor quality ground water in the basin. Essential components of the study of the physical ground-water resource are the development of a quantitative understanding of regional ground-water availability and flow, and of ground-water/surface-water interactions. Of paramount interest in the characterization of naturally occurring poor-quality ground water in the Willamette Basin is the distribution of arsenic in ground water, the subject of this report. Arsenic contaminates many regional aquifer systems worldwide (Cantor, 1996; Thornton, 1996), and arsenic commonly is detected in ground water of the Willamette Basin at concentrations exceeding the U.S. Environmental Protection Agency (USEPA) current drinking water Maximum Contaminant Level (MCL) of 50 µg/L (micrograms per liter) (U.S. Environmental Protection Agency, 1996). Arsenic is associated with a number of adverse effects on human health. The USEPA considers arsenic to be a human carcinogen (U.S. Environmental Protection Agency, 1996). Examples of other adverse health effects attributed to consumption of arsenic range from weakness and abdominal pain to neurological and cardiovascular problems. A review of health effects associated with consumption of arsenic is given in a report by World Health Organization (1996).

Oregon↗

USGS2009

Applications of a broad-spectrum tool for conservation and fisheries analysis: Aquatic gap analysis

Natural resources support all of our social and economic activities, as well as our biological existence. Humans have little control over most of the physical, biological, and sociological conditions dictating the status and capacity of natural resources in any particular area. However, the most rapid and threatening influences on natural resources typically are anthropogenic overuse and degradation. In addition, living natural resources (i.e., organisms) do not respect political boundaries, but are aware of their optimal habitat and environmental conditions. Most organisms have wider spatial ranges than the jurisdictional boundaries of environmental agencies that deal with them; even within those jurisdictions, information is patchy and disconnected. Planning and projecting effects of ecological management are difficult, because many organisms, habitat conditions, and interactions are involved. Conservation and responsible resource use involves wise management and manipulation of the aspects of the environment and biological communities that can be effectively changed. Tools and data sets that provide new insights and analysis capabilities can enhance the ability of resource managers to make wise decisions and plan effective, long-term management strategies. Aquatic gap analysis has been developed to provide those benefits. Gap analysis is more than just the assessment of the match or mis-match (i.e., gaps) between habitats of ecological value and areas with an appropriate level of environmental protection (e.g., refuges, parks, preserves), as the name suggests. Rather, a Gap Analysis project is a process which leads to an organized database of georeferenced information and previously available tools to examine conservation and other ecological issues; it provides a geographic analysis platform that serves as a foundation for aquatic ecological studies. This analytical tool box allows one to conduct assessments of all habitat elements within an area of interest. Aquatic gap analysis naturally focuses on aquatic habitats. The analytical tools are largely based on specification of the species-habitat relations for the system and organism group of interest (Morrison et al. 2003; McKenna et al. 2006; Steen et al. 2006; Sowa et al. 2007). The Great Lakes Regional Aquatic Gap Analysis (GLGap) project focuses primarily on lotic habitat of the U.S. Great Lakes drainage basin and associated states and has been developed to address fish and fisheries issues. These tools are unique because they allow us to address problems at a range of scales from the region to the stream segment and include the ability to predict species specific occurrence or abundance for most of the fish species in the study area. The results and types of questions that can be addressed provide better global understanding of the ecological context within which specific natural resources fit (e.g., neighboring environments and resources, and large and small scale processes). The geographic analysis platform consists of broad and flexible geospatial tools (and associated data) with many potential applications. The objectives of this article are to provide a brief overview of GLGap methods and analysis tools, and demonstrate conservation and planning applications of those data and tools. Although there are many potential applications, we will highlight just three: (1) support for the Eastern Brook Trout Joint Venture (EBTJV), (2) Aquatic Life classification in Wisconsin, and (3) an educational tool that makes use of Google Earth (use of trade or product names does not imply endorsement by the U.S. Government) and Internet accessibility.

Gap Analysis Bulletin↗

USGS2021

Public and private tapwater: Comparative analysis of contaminant exposure and potential risk, Cape Cod, Massachusetts, USA

Background Humans are primary drivers of environmental contamination worldwide, including in drinking-water resources. In the United States (US), federal and state agencies regulate and monitor public-supply drinking water while private-supply monitoring is rare; the current lack of directly comparable information on contaminant-mixture exposures and risks between private- and public-supplies undermines tapwater (TW) consumer decision-making. Methods We compared private- and public-supply residential point-of-use TW at Cape Cod, Massachusetts, where both supplies share the same groundwater source. TW from 10 private- and 10 public-supply homes was analyzed for 487 organic, 38 inorganic, 8 microbial indicators, and 3 in vitro bioactivities. Concentrations were compared to existing protective health-based benchmarks, and aggregated Hazard Indices (HI) of regulated and unregulated TW contaminants were calculated along with ratios of in vitro exposure-activity cutoffs. Results Seventy organic and 28 inorganic constituents were detected in TW. Median detections were comparable, but median cumulative concentrations were substantially higher in public supply due to 6 chlorine–disinfected samples characterized by disinfection byproducts and corresponding lower heterotrophic plate counts. Public-supply applicable maximum contaminant (nitrate) and treatment action (lead and copper) levels were exceeded in private-supply TW samples only. Exceedances of health-based HI screening levels of concern were common to both TW supplies. Discussion These Cape Cod results indicate comparable cumulative human-health concerns from contaminant exposures in private- and public-supply TW in a shared source-water setting. Importantly, although this study’s analytical coverage exceeds that currently feasible for water purveyors or homeowners, it nevertheless is a substantial underestimation of the full breadth of contaminant mixtures documented in the environment and potentially present in drinking water. Conclusion Regardless of the supply, increased public engagement in source-water protection and drinking-water treatment, including consumer point-of-use treatment, is warranted to reduce risks associated with long-term TW contaminant exposures, especially in vulnerable populations.

Massachusetts↗

USGS1996

Occurrence of selected trace elements and organic compounds and their relation to land use in the Willamette River basin, Oregon, 1992-94

Between 1992 and 1994, the U.S.Geological Survey conducted a study of trace elements and organic compounds in the Willamette River Basin, Oregon, as part of the Willamette River Basin Water Quality Study. Low-level analyses were performed for trace elements, volatile organic compounds, organochlorine compounds, and pesticides. Overall, 94 water samples were collected from 40 sites, during predominantly high-flow conditions, representing urban, agricultural, mixed, and forested land uses. Although most observed concentrations were relatively low, some exceedances of water-quality criteria for acute and chronic toxicity and for the protection of human health were observed. Concentrations of chromium, copper, lead, and zinc in unfiltered water were well correlated with concentrations of suspended sediment. The highest trace-element concentrations generally were found at urban sites that receive a large portion of their runoff from industrial areas, particularly at high suspended- sediment concentrations. In contrast, concentrations of trace elements in some urban streams draining primarily residential areas appeared to approach a maximum as sediment concentrations increased. Whether this difference was due to a difference in the nature of the suspended sediments or to different concentrations in the aqueous phases from the two site types was not addressed. Eight organochlorine compounds were detected at 14 sites. Lindane, dieldrin, and DDT or its metabolites were each detected in about 30 percent of the samples, predominantly in samples collected from agricultural and urban areas. Polychlorinated biphenyl (PCB) compounds were detected in samples from two urban sites. For samples in which DDT and its metabolites were examined for partitioning, the largest proportion of the mass of DDT and its metabolites was associated with suspended sediment. In contrast, dieldrin and lindane were almost completely (greater than 99 percent) associated with the dissolved phase. Sixty-one of the 94 pesticides analyzed in filtered water were documented to have been used in the basin in 1987; 43 of these were detected at least once during 1992–94. An additional five were detected that were not documented in the 1987 estimates. Although a comparison between the frequency of detected pesticides and 1987 estimates of pesticide usage in the basin showed generally little correlation, some patterns of detections did appear to reflect land use in the basin. Of the 25 most frequently detected pesticides, 3 were found primarily at urban sites, 6 were found primarily at agricultural sites, and 7 were found at all types of sites except forested. The four most commonly detected pesticides in the basin, observed at all except forested site 2 types, were atrazine, metolachlor, simazine, and diuron. A greater variety of compounds was detected at sites in the northern portion of the basin than in the southern portion of the basin probably because the northern portion has more diverse agricultural practices and a larger urban component. Possible reasons for the lack of agreement between pesticide detections and pesticide usage estimates include (1) uncertainty in the usage estimates due to spatial and temporal variability or due to changes in agricultural practices since the 1987 estimates were compiled, (2) chemical or biological transformations in the compounds after application, (3) variable hydrologic conditions among sites at the time of sampling, or (4) the ability of laboratory analytical procedures to detect low concentrations of some analytes. Results from repeated samplings at two sites during sequential storms in the fall of 1994 indicated that concentrations and loads of several constituents, including suspended sediment, suspended organic carbon, DDT, metolachlor, and atrazine were highest during peak flows of the first or second significant storms of the fall. Samplings during subsequent storms indicated that instantaneous concentrations and loads were generally reduced; however, data were not sufficient to compare overall transport during sequential storms.

Oregon↗