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Sampling and monitoring for closure

An important aspect of planning a new mine or mine expansion within the modern regulatory framework is to design for ultimate closure. Sampling and monitoring for closure is a form of environmental risk management. By implementing a sampling and monitoring program early in the life of the mining operation, major costs can be avoided or minimized. The costs for treating mine drainage in perpetuity are staggering, especially if they are unanticipated. The Metal Mining Sector of the Acid Drainage Technology Initiative (ADTI-MMS), a cooperative government-industry-academia organization, was established to address drainage-quality technologies of metal mining and metallurgical operations. ADTI-MMS recommends that sampling and monitoring programs consider the entire mine-life cycle and that data needed for closure of an operation be collected from exploration through postclosure.

Reviews in Engineering Geology↗

Ecological assessment of selenium in the aquatic environment

Based on the work and contributions of 46 scientists, managers, and policymakers, Ecological Assessment of Selenium in the Aquatic Environment documents the state of the science and explores how to use this information when assessing and managing the environmental effects of Se. A focused discussion on the fate and effects of Se in aquatic ecosystem.

Book↗

FishStan: Hierarchical Bayesian models for fisheries

Fisheries managers and ecologists use statistical models to estimate population-level relations and demographic rates (e.g., length-maturity curves, growth curves, and mortality rates). These relations and rates provide insight into populations and inputs for other models. For example, growth curves may vary across lakes showing fish populations differ due to management actions or underlying environmental conditions. A fisheries manager could use this information to set lake-specific harvest limits or an ecologist could use this information to test scientific hypotheses about fish populations. The above example also demonstrates how populations exist within hierarchical structures where sub-populations may be nested within a meta-population. More generally, these hierarchical structures may be both biological (e.g., different lakes or river pools) and statistical (e.g., correlated error structures). Currently, limited options exist for fitting these hierarchical models and people seeking to use them often must program their own implementations. Furthermore, many fisheries managers and researchers may not have Bayesian programming skills, but many can use interactive languages such as R. Additionally, programs such as JAGS often require long run times (e.g., hours if not days) to fit hierarchical models and programs such as Stan can be more difficult to program because it is a compiled language. We created fishStan to share hierarchical models for fisheries and ecology in an easy-to-use R package.

Journal of Open Source Software↗

Survival of breeding Pacific common eiders on the Yukon-Kuskokwim Delta, Alaska

Populations of Pacific common eiders ( Somateria mollissima v-nigrum ) breeding in Alaska, USA, have declined markedly over the past 40 years. We studied survival of adult female Pacific common eiders using capture—recapture of nesting hens at 3 sites on the Yukon-Kuskokwim Delta (YKD), Alaska from 1994 to 2004. We used data consisting of 268 recapture events from 361 uniquely marked individuals to investigate temporal, geographic, and environmental variation in adult female survival. Our results suggest apparent annual survival of adult eiders from the YKD was high (0.892, SE = 0.022) and spatially and temporally invariant (σ 2 = 0.005), a pattern consistent with other long-lived marine birds. Moreover, our results suggest adult survival may be functionally fixed for Pacific common eiders, and at the present, adult survival may be relatively unresponsive to environmental or management perturbations. Our data did not support hypothesized variation in survival relative to mortality factors such as predation on breeding grounds, physiologic costs of reproduction, and wintering conditions. Although changes in adult survival likely have a large potential effect on prospective population growth, our results suggest viable management actions aimed at increasing survival may be extremely limited.

Journal of Wildlife Management↗

Geographic information systems, remote sensing, and spatial analysis activities in Texas, 2002-07

Geographic information system (GIS) technology has become an important tool for scientific investigation, resource management, and environmental planning. A GIS is a computer-aided system capable of collecting, storing, analyzing, and displaying spatially referenced digital data. GIS technology is particularly useful when analyzing a wide variety of spatial data such as with remote sensing and spatial analysis. Remote sensing involves collecting remotely sensed data, such as satellite imagery, aerial photography, or radar images, and analyzing the data to gather information or investigate trends about the environment or the Earth's surface. Spatial analysis combines remotely sensed, thematic, statistical, quantitative, and geographical data through overlay, modeling, and other analytical techniques to investigate specific research questions. It is the combination of data formats and analysis techniques that has made GIS an essential tool in scientific investigations. This document presents information about the technical capabilities and project activities of the U.S. Geological Survey (USGS) Texas Water Science Center (TWSC) GIS Workgroup from 2002 through 2007.

Fact Sheet↗

Geographic information systems, remote sensing, and spatial analysis activities in Texas, 2008-09

Geographic information system (GIS) technology has become an important tool for scientific investigation, resource management, and environmental planning. A GIS is a computer-aided system capable of collecting, storing, analyzing, and displaying spatially referenced digital data. GIS technology is useful for analyzing a wide variety of spatial data. Remote sensing involves collecting remotely sensed data, such as satellite imagery, aerial photography, or radar images, and analyzing the data to gather information or investigate trends about the environment or the Earth's surface. Spatial analysis combines remotely sensed, thematic, statistical, quantitative, and geographical data through overlay, modeling, and other analytical techniques to investigate specific research questions. It is the combination of data formats and analysis techniques that has made GIS an essential tool in scientific investigations. This fact sheet presents information about the technical capabilities and project activities of the U.S. Geological Survey (USGS) Texas Water Science Center (TWSC) GIS Workgroup during 2008 and 2009. After a summary of GIS Workgroup capabilities, brief descriptions of activities by project at the local and national levels are presented. Projects are grouped by the fiscal year (October-September 2008 or 2009) the project ends and include overviews, project images, and Internet links to additional project information and related publications or articles.

Fact Sheet↗

Water security-National and global issues

Potable or clean freshwater availability is crucial to life and economic, environmental, and social systems. The amount of freshwater is finite and makes up approximately 2.5 percent of all water on the Earth. Freshwater supplies are small and randomly distributed, so water resources can become points of conflict. Freshwater availability depends upon precipitation patterns, changing climate, and whether the source of consumed water comes directly from desalination, precipitation, or surface and (or) groundwater. At local to national levels, difficulties in securing potable water sources increase with growing populations and economies. Available water improves living standards and drives urbanization, which increases average water consumption per capita. Commonly, disruptions in sustainable supplies and distribution of potable water and conflicts over water resources become major security issues for Government officials. Disruptions are often influenced by land use, human population, use patterns, technological advances, environmental impacts, management processes and decisions, transnational boundaries, and so forth.

Fact Sheet↗

U.S. Geological Survey shrub/grass products provide new approach to shrubland monitoring

In the Western United States, shrubland ecosystems provide vital ecological, hydrological, biological, agricultural, and recreational services. However, disturbances such as livestock grazing, exotic species invasion, conversion to agriculture, climate change, urban expansion, and energy development are altering these ecosystems. Improving our understanding of how shrublands are distributed, where they are changing, the extent of the historical change, and likely future change directions is critical for successful management of these ecosystems. Remote-sensing technologies provide the most likely data source for large-area monitoring of ecosystem disturbance—both near-real time and historically. A monitoring framework supported by remote-sensing data can offer efficient and accurate analysis of change across a range of spatial and temporal scales. The U.S. Geological Survey has been working to develop new remote-sensing data, tools, and products to characterize and monitor these changing shrubland landscapes. Nine individual map products (components) have been developed that quantify the percent of shrub, sagebrush, big sagebrush, herbaceous, annual herbaceous, litter, bare ground, shrub height, and sagebrush height at 1-percent intervals in each 30-meter grid cell. These component products are designed to be combined and customized to widely support different applications in rangeland monitoring, analysis of wildlife habitat, resource inventory, adaptive management, and environmental review.

Fact Sheet↗

Assessment of existing groundwater quality data in the Green-Duwamish watershed, Washington

The United States Geological Survey (USGS) provided technical support to the Washington Department of Ecology (Ecology) in their assessment of the role groundwater plays in contributing pollutant loading to the Green-Duwamish River near Seattle, Washington. Ecology is developing watershed hydrology models of the Green-Duwamish watershed, and need to assign realistic contaminant concentrations to the various Hydrologic Response Units represented in their models. The USGS compiled existing groundwater quality data in the Green-Duwamish watershed, and this report summarizes results and interpretation of the dataset, including identifying data gaps and needs for further research and monitoring. The sources of existing data were the USGS’s National Water Information System, Ecology’s Environmental Information Management System, and a compilation of several studies by Leidos, a scientific research company. The water-quality parameters of interest included polychlorinated biphenyl (PCB) Aroclors and congeners, phthalates, carcinogenic polycyclic aromatic hydrocarbons (cPAHs), arsenic, copper, and zinc. Results were grouped into the four subwatersheds delineated in Ecology’s hydrology models: Duwamish, Lower Green, Soos, and Upper Green. Results from the Duwamish subwatershed were further sub-divided by the USGS into the Lower Duwamish, containing land adjacent to the Lower Duwamish Waterway Superfund site, and the Upper Duwamish, containing the remaining area of the Duwamish subwatershed. Groundwater quality data in the Lower Duwamish were treated separately because there is known contamination in this area. The availability of water quality data varied by subwatershed as follows: phthalate data was only available within the Duwamish, PCB data was available within the Duwamish and Lower Green, cPAH data was available within the Duwamish, Lower Green, and Soos, and data for arsenic, copper, and zinc were available within all four subwatersheds. More than 99 percent of the available data was within the Duwamish subwatershed, identifying a need for additional monitoring of groundwater quality in the other subwatersheds.

Washington↗

Hydrologic data for urban storm runoff from three localities in the Denver metropolitan area, Colorado

Urban storm-runoff data, collected from 1975 to 1977, on three catchment areas in the Denver, Colo., metropolitan area are presented. The catchment are predominantly a single-family residential catchment area in Littleton, a multifamily residential and commercial catchment area in Lakewood, and a high-density residential and commercial catchment area in Denver. Precipitation, rainfall-runoff, snowmelt-runoff, water-quality (common constituents, nutrients, biochemical oxygen demand, coliform bacteria, and solids, trace elements, and pesticides), and catchment-area data are necessary to use the U.S. Environmental Protection Agency 's Storm Water Management Model II. The urban storm-runoff data may be used by planning, water-management, and environmental-protection agencies to assess the impact of urban storm runoff on the hydrologic system. (Woodard-USGS)

Colorado↗

Land-Cover Trends of the Central Basin and Range Ecoregion

The U.S. Geological Survey (USGS) Land Cover Trends research project is focused on understanding the amounts, rates, trends, causes, and implications of contemporary land-use and land-cover (LU/LC) change in the United States. This project is supported by the USGS Geographic Analysis and Monitoring Program in collaboration with the U.S. Environmental Protection Agency (EPA) and the National Aeronautics and Space Administration (NASA). LU/LC change is a pervasive process that modifies landscape characteristics and affects a broad range of socioeconomic, biologic, and hydrologic systems. Understanding the impacts and feedbacks of LU/LC change on environmental systems requires an understanding of the rates, patterns, and driving forces of past, present, and future LU/LC change. The objectives of the Land Cover Trends project are to (1) determine and describe the amount, rates, and trends of contemporary LU/LC change by ecoregion for the period 1973-2000 for the conterminous United States, (2) document the causes, driving forces, and implications of change, and (3) synthesize individual ecoregion results into a national assessment of LU/LC change. The Land Cover Trends research team includes staff from the USGS National Center for Earth Resources Observation and Science (EROS), Rocky Mountain Geographic Science Center, Eastern Geographic Science Center, Mid-Continent Geographic Science Center, and the Western Geographic Science Center. Other partners include researchers at South Dakota State University, University of Southern Mississippi, and State University of New York College of Environmental Science and Forestry. This report presents an assessment of LU/LC change in the Central Basin and Range ecoregion for the period 1973-2000. The Central Basin and Range ecoregion is one of 84 Level-III ecoregions as defined by the Environmental Protection Agency. Ecoregions have served as a spatial framework for environmental resource management and to denote areas that contain a geographically distinct assemblage of biotic and abiotic phenomena including geology, physiography, vegetation, climate, soils, land use, wildlife, and hydrology. The established Land Cover Trends methodology generates estimates of LU/LC change using a probability sampling approach and change-detection analysis of thematic land-cover images derived from Landsat satellite imagery.

Scientific Investigations Report↗

Land-Cover Trends of the Southern California Mountains Ecoregion

This report presents an assessment of land-use and land-cover (LU/LC) change in the Southern California Mountains ecoregion for the period 1973-2001. The Southern California Mountains is one of 84 Level-III ecoregions as defined by the U.S. Environmental Protection Agency (EPA). Ecoregions have served as a spatial framework for environmental resource management, denoting areas that contain a geographically distinct assemblage of biotic and abiotic phenomena including geology, physiography, vegetation, climate, soils, land use, wildlife, and hydrology. The established Land Cover Trends methodology generates estimates of change for ecoregions using a probability sampling approach and change-detection analysis of thematic land-cover images derived from Landsat satellite imagery.

Scientific Investigations Report↗

Land Cover Trends in the Southern Florida Coastal Plain

This report presents an assessment of land use and land cover change in the Southern Florida Coastal Plain ecoregion for the period from 1973 to 2000. The ecoregion is one of 84 level III ecoregions defined by the Environmental Protection Agency; ecoregions have been designed to serve as a spatial framework for environmental resource management and denote areas that contain a geographically distinct assemblage of biotic and abiotic phenomena, including geology, physiography, vegetation, climate, soils, land use, wildlife, and hydrology. The Southern Florida Coastal Plain ecoregion covers an area of approximately 22,407 square kilometers [8,651 square miles] across the lower portion of the Florida peninsula, from Lake Okeechobee southward through the Florida Keys. It comprises flat plains with wet soils, marshland and swamp land cover with Everglades and palmetto prairie vegetation types.

Scientific Investigations Report↗

Sediment Transport in the Bill Williams River and Turbidity in Lake Havasu During and Following Two High Releases from Alamo Dam, Arizona, in 2005 and 2006

Discharges higher than are typically released from Alamo Dam in west-central Arizona were planned and released in 2005, 2006, 2007, and 2008 to study the effects of these releases on the Bill Williams River and Lake Havasu, into which the river debouches. Sediment concentrations and water discharges were measured in the Bill Williams River, and turbidity, temperature, and dissolved oxygen were measured in Lake Havasu during and after experimental releases in 2005 and 2006 from Alamo Dam. Data from such releases will support ongoing ecological studies, improve environmentally sensitive management of the river corridor, and support the development of a predictive relationship between the operation of Alamo Dam and downstream flows and their impact on Lake Havasu and the Colorado River. Elevated discharges in the Bill Williams River mobilize more sediment than during more typical dam operation and can generate a turbidity plume in Lake Havasu. The intakes for the Central Arizona Project, which transfers Colorado River water to central and southern Arizona, are near the mouth of the Bill Williams River. Measurement of the turbidity and the development of the plume over time consequently were important components of the study. In this report, the measurements of suspended sediment concentration and discharges in the Bill Williams River and of turbidity in Lake Havasu are presented along with calculations of silt and sand loads in the Bill Williams River. Sediment concentrations were varied and likely dependent on a variable supply. Sediment loads were calculated at the mouth of the river and near Planet, about 10 km upstream from the mouth for the 2005 release, and they indicate that a net increase in transport of silt and a net decrease in the transport of sand occurred in the reach between the two sites.

Scientific Investigations Report↗

Occurrence and potential transport of selected pharmaceuticals and other organic wastewater compounds from wastewater-treatment plant influent and effluent to groundwater and canal systems in Miami-Dade County, Florida

An increased demand for fresh groundwater resources in South Florida has prompted Miami-Dade County to expand its water reclamation program and actively pursue reuse plans for aquifer recharge, irrigation, and wetland rehydration. The U.S. Geological Survey, in cooperation with the Miami-Dade Water and Sewer Department (WASD) and the Miami-Dade Department of Environmental Resources Management (DERM), initiated a study in 2008 to assess the presence of selected pharmaceuticals and other organic wastewater compounds in the influent and effluent at three regional wastewater-treatment plants (WWTPs) operated by the WASD and at one WWTP operated by the City of Homestead, Florida (HSWWTP).

Florida↗

Population viability analysis for endangered Roanoke logperch

A common strategy for recovering endangered species is ensuring that populations exceed the minimum viable population size (MVP), a demographic benchmark that theoretically ensures low long-term extinction risk. One method of establishing MVP is population viability analysis, a modeling technique that simulates population trajectories and forecasts extinction risk based on a series of biological, environmental, and management assumptions. Such models also help identify key uncertainties that have a large influence on extinction risk. We used stochastic count-based simulation models to explore extinction risk, MVP, and the possible benefits of alternative management strategies in populations of Roanoke logperch Percina rex , an endangered stream fish. Estimates of extinction risk were sensitive to the assumed population growth rate and model type, carrying capacity, and catastrophe regime (frequency and severity of anthropogenic fish kills), whereas demographic augmentation did little to reduce extinction risk. Under density-dependent growth, the estimated MVP for Roanoke logperch ranged from 200 to 4200 individuals, depending on the assumed severity of catastrophes. Thus, depending on the MVP threshold, anywhere from two to all five of the logperch populations we assessed were projected to be viable. Despite this uncertainty, these results help identify populations with the greatest relative extinction risk, as well as management strategies that might reduce this risk the most, such as increasing carrying capacity and reducing fish kills. Better estimates of population growth parameters and catastrophe regimes would facilitate the refinement of MVP and extinction-risk estimates, and they should be a high priority for future research on Roanoke logperch and other imperiled stream-fish species.

Journal of Fish and Wildlife Management↗

Wildlife Study Design

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Springer series on environmental management.↗