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USGS2023

Turkey Vulture survival is reduced in areas of greater road density

The demography of, and factors that influence these metrics, are largely unknown for most vultures in the Americas. Survivorship of Turkey Vultures ( Cathartes aura ) may be influenced by landscape heterogeneity and human disturbance. We quantified the effects of landscape composition (Shannon’s diversity index) and configuration (contagion, edge density, and largest patch index), and human disturbance (road density) on the annual and seasonal survival probabilities of the three North American breeding populations (western, central, and eastern) of Turkey Vultures that spend the nonbreeding season in the southeastern portion of the Nearctic and the northern Neotropics during a 17-year period. We used Cox’s proportional hazards models with time-varying covariates to estimate spatial and temporal changes in survival rates of adult Turkey Vultures. Road density, but not landscape composition or configuration, influenced survival rates in space and time. Overall annual survival averaged 0.87 (95% confidence interval [CI]: 0.74–0.98). Mortality risk was low in western and central populations (hazard ratio < 1) but was 3.7 times greater for vultures in the eastern population. Survival during the breeding (0.97, 95% CI: 0.96–0.98) and outbound migration (1.0, 95% CI: 1–1) seasons was significantly higher than the other seasons. Average survival tended to be higher for nonbreeding (0.81, 95% CI: 0.71–0.88) compared to return migration (0.69, 95% CI: 0.56–0.81) seasons. The risk of mortality for all vulture populations increased with road density, and this was greater during the nonbreeding and return migration seasons. The spatial variation in road density across the Americas may generate a network of ecological traps for Turkey Vultures induced to stop in areas of greater road-kill abundance. Road-killed animals acting as an attractant for vultures can increase the occurrence of vulture–vehicle collisions and potentially aggravate human–wildlife conflicts. Further analyses are needed to address survivorship and mortality factors for young birds. Our results may help the implementation of specific mitigation efforts to reduce human–vulture conflicts and vulture mortality. For instance, concentrating efforts to remove road-killed animals in areas where road density is highest can likely reduce vulture–vehicle collisions and associated mortalities of these birds.

Article↗

USGS1990

Genetic differentiation of walleye stocks in Lake St. Clair and western Lake Erie

Allozyme data from six spawning sites of walleyes (Stizostedion vitreum vitreum) in western Lake Erie and two in Lake St. Clair demonstrated significant differences between allelic frequencies in fish from the two lakes. In contrast, differences were only slight between walleyes from different spawning sites within each lake. Of 21 presumptive genetic loci assayed electrophoretically, 4 were polymorphic enough to differentiate the populations. Allelic frequencies differentiating the stocks were stable between year classes, sexes, and sample years, showing that fry hatched in a particular area were returning there to spawn. These findings support other evidence for homing in Great Lakes walleyes.

Fish and Wildlife Technical Report↗

USGS2014

Exposure pathways and biological receptors: baseline data for the canyon uranium mine, Coconino County, Arizona

Recent restrictions on uranium mining within the Grand Canyon watershed have drawn attention to scientific data gaps in evaluating the possible effects of ore extraction to human populations as well as wildlife communities in the area. Tissue contaminant concentrations, one of the most basic data requirements to determine exposure, are not available for biota from any historical or active uranium mines in the region. The Canyon Uranium Mine is under development, providing a unique opportunity to characterize concentrations of uranium and other trace elements, as well as radiation levels in biota, found in the vicinity of the mine before ore extraction begins. Our study objectives were to identify contaminants of potential concern and critical contaminant exposure pathways for ecological receptors; conduct biological surveys to understand the local food web and refine the list of target species (ecological receptors) for contaminant analysis; and collect target species for contaminant analysis prior to the initiation of active mining. Contaminants of potential concern were identified as arsenic, cadmium, chromium, copper, lead, mercury, nickel, selenium, thallium, uranium, and zinc for chemical toxicity and uranium and associated radionuclides for radiation. The conceptual exposure model identified ingestion, inhalation, absorption, and dietary transfer (bioaccumulation or bioconcentration) as critical contaminant exposure pathways. The biological survey of plants, invertebrates, amphibians, reptiles, birds, and small mammals is the first to document and provide ecological information on .200 species in and around the mine site; this study also provides critical baseline information about the local food web. Most of the species documented at the mine are common to ponderosa pine Pinus ponderosa and pinyon–juniper Pinus–Juniperus spp. forests in northern Arizona and are not considered to have special conservation status by state or federal agencies; exceptions are the locally endemic Tusayan flameflower Phemeranthus validulus, the long-legged bat Myotis volans, and the Arizona bat Myotis occultus. The most common vertebrate species identified at the mine site included the Mexican spadefoot toad Spea multiplicata, plateau fence lizard Sceloporus tristichus, violetgreen swallow Tachycineta thalassina, pygmy nuthatch Sitta pygmaea, purple martin Progne subis, western bluebird Sialia mexicana, deermouse Peromyscus maniculatus, valley pocket gopher Thomomys bottae, cliff chipmunk Tamias dorsalis, black-tailed jackrabbit Lepus californicus, mule deer Odocoileus hemionus, and elk Cervus canadensis. A limited number of the most common species were collected for contaminant analysis to establish baseline contaminant and radiological concentrations prior to ore extraction. These empirical baseline data will help validate contaminant exposure pathways and potential threats from contaminant exposures to ecological receptors. Resource managers will also be able to use these data to determine the extent to which local species are exposed to chemical and radiation contamination once the mine is operational and producing ore. More broadly, these data could inform resource management decisions on mitigating chemical and radiation exposure of biota at high-grade uranium breccia pipes throughout the Grand Canyon watershed.

Arizona↗

USGS2026

Predicting disease spread from host movement data: Chronic wasting disease in North America as a case study

1. Rare long-distance movements can increase the spatial spread of invasive species and shifts in species ranges. However, in the context of wildlife disease spread, seasonal migrations only matter if they lead to transmission beyond an individual’s initial set of contacts, and the importance of juvenile dispersal depends on whether those juveniles become infected before they disperse. 2. High resolution animal movement data are increasing, but it is unclear how to leverage these data to improve predictions future disease spread particularly in regions without pre-existing movement data. 3. We predicted the speed of chronic wasting disease (CWD) spread based on movement metrics of mule deer ( Odocoileus hemionus ) and white-tailed deer ( Odocoileus virginianus ) and compared our predictions to observed spreading rates in North America from 2005 to 2022. We hypothesized that CWD should spread faster in regions with long-distance migratory mule deer, but this hypothesis was only partially supported. 4. Observed rates of CWD spread were faster in western epicenters with more mobile mule deer than in epicenters with only white-tailed deer (14-18 km/yr compared to 5-7 km/yr, respectively). However, the observed speed of CWD spread did not align well with migration distances. Deer movements in the Canadian Prairie Provinces (CPP) were far shorter than those in Colorado and Wyoming, yet had faster CWD spread much of which was open prairies where deer movements tend to be along riverine corridors rather than the longer elevational migrations in more montane regions. 5. Generally, our predicted rates of CWD spread from three different models were far slower than the observed rates regardless of whether the model included dispersal or migration. Understanding of these discrepancies is needed before high-resolution animal movement data can be used to predict broad-scale patterns of disease invasion. 6. Anthropogenic movements likely explain longer-distance movements of CWD across North America, but it remains unclear whether human-mediated movements or alternative analytical methods and deer movement metrics can explain the faster than predicted local CWD spread.

Journal of Animal Ecology↗

USGS2010

Methylmercury cycling, bioaccumulation, and export from agricultural and non-agricultural wetlands in the Yolo Bypass

This 18-month field study addresses the seasonal and spatial patterns and processes controlling methylmercury (MeHg) production, bioaccumulation, and export from natural and agricultural wetlands of the Yolo Bypass Wildlife Area (YBWA). The data were collected in conjuntion with a Proposition 40 grant from the State Water Resources Control Board in support of the development of Best Management Practices (BMP's) for reducing MeHg loading from agricultural lands in the wetland-dominated Yolo Bypass to the Sacramento-San Joaquin River Delta. The four managemenr-based questions addressed in this study were: 1. Is there a different among agricultural and managfed wetland types in terms of Me Hg dynamic (production, degradation, bioaccumulation, or export)? 2. Does water residence time influence MeHg dynamics? 3. Does the application of sulfate-based fertilizer impact MeHg production rates? 4. Does the presence (or absence) of vegetation influence MeHg production rates? Measurements of MeHg concentrations in sediment, water, and biota (plants, invertebrates, and fish) were made to assess management-level patterns in five wetland types, which included three type of shallowly-flooded agricultural wetlands (white rice, wild rice, and fallow) and two types of managed wetlands (permanently and seasonally flooded). To strengthen our understanding of the processes underlying the seasonal and spatial patterns of MeHg cycling, additional exploratory factors were measured including ancillary sediment and water quality parameters, stable isotope fractionation (oxygen, sulfur, carbon, and nitrogen), photodemethylation rates, and daily-integrated hydrologic budgets. Samples and field data were collected from May 2007 to July 2008, and nearly all sample analyses were completed by September 2008 as per the Quality Assurance Program Plan (QAPP) requirements. Although wetland type was a major factor that drove the study design, within-field hydrology also proved to be an important factor controlling aqueous MeHg and total mercury (THg) concentrations and export. Overall, agricultural wetlands exhibited higher MeHg concentrations in overlying water, sediment, and biota than did managed seasonal and permanent wetlands. This appears to be partly due to higher rates of sediment in microbial production of MeHg on agricultural wetlands during the fall through spring period. Both sulfate- and iron-reducing bacteria have been implicated in the MeHg production process, and both were demonstrably active in all wetlands studied; however, sulfate-reducing bacteria were not stimulated by the addition of sulfate-based fertilizer to agricultural wetlands, suggesting that easily-degraded (labile) organic matter, rather than sulfate, was limiting their activity in these field types. The data suggest that agriculturally-managed soils promoted MeHg production through 1) enhanced microbial activity via higher temperatures and larger pools of labile carbon, and 2) enhanced pools of microbially available inorganic divalent mercury (Hg(II)) resulting from a decrease in reduced-sulfur, solid-phase minerals under oxic or only mildly reducing conditions. MeHg mass balances were assessed by comparing filed-specific MeHg loads for inlets vs. outlet flows. The overall mass balance for MeHg in surface water during the summer irrigation period (June - September 2007) indicated little to no net MeHg export from the six agricultural wetlands taken as a whole. Of the six agricultural wetlands, there was net overall MeHg export from two fields (one fallow and one white rice) during August, and from four of the six fields (one fallow, one white rice, and two wild rice) during September) Over the entire summer irrigation period, two of the fields (one fallow and one wild rive) showed net MeHg export, and the other four fields showed wither net import or no significant change. Rates of measured photomethylation and exchange between sediment and water pools suggest that both processes may be responsible for the lack of MeHg export. Despite significant differences during winter months between fields in surface water concentrations of MeHg, MeHg loads were not calculated in mid-winter because flood waters had overtopped field boundaries and field fidelity could not be established. During the summer 2007 irrigation season, surface water out-flows from agricultural wetlands were 9%-36% of inlet flows, and evaporation rates explained most of this water loss, with infiltration likely accounting for the remainder. Unfiltered aqueous MeHg concentrations increased from <1 ng L -1 in source waters to up to 10 ng L -1 in agricultural wetland drains during the summer irrigation period. Increases in solute concentration caused by evapoconcentration were estimated by determining concentration factors (outflow/inflow) for chloride (a conservative dissolved constituent) and by measuring oxygen isotope ratios ( 18 O/ 16 O, expressed as δ 18 O) in water. Increases in MeHg concentration from inflows-to-outflows exceeded those caused by evapoconcentration on several fields during the summer irrigation season. This was especially true when initial surface water MeHg concentrations were low, as seen in the southern block of fields receiving irrigation water directly from the Toe Drain. The northern block of fields received irrigation water from Greens Lake, which included Toe Drain water plus recirculated drain water from other agricultural fields within the Yolo Bypass and west of the Yolo Bypass; as such, the northern fields showed a smaller percentage increase in MeHg concentration because initial MeHg concentrations in surface water inflows were greater than in inputs to the southern fields. Mercury concentrations in fish were greater in agricultural wetlands white rice and wild rice) than in the two permanently flooded wetlands. Additionally, Hg concentrations in biota showed a general increase from inlets to outlets withing agricultural wetlands, but not within permanent wetlands. This was particular evident in white rice fields where caged western mosquitofish at the outlets had Hg concentrations that were more than 4 times higher than in caged fish held at the inlets. Similar spatial patterns in Hg bioaccumulation in agricultural and permanent wetlands were seen for wild populations of western mosquitofish and Mississippi silversides. In contrast to fish, invertebrates, such as water-boatman (Corixidae) and back swimmers (Notonectidae), had greater Hg concentrations in permanent wetlands than in tempoarirly flooded agricultural wetlands, Fish THg concentrations were weakly correlated with water MeHg,a and not correlated with sediment MeHg. In contrast, invertebrate MeHg concentrations were more strongly correlated with sediment MeHg than with water MeHg concentrations. These results illustrate the complexity of MeHg bioaccumulation through food webs and indicate the importance of simultaneously using multiple biosentinels when monitoring MeHg production and bioaccumulation. Despite high sediment production rates and water concentrations in agricultural wetlands, MeHg export was physically limited by hydrologic export for all wetlands studied. We suggest that load reduction is maximized by limiting water throughout, but that on-site biota exposure is maximized by this loner water residence time. While field-specific hydrologic loads could not be fully quantified during flood conditions in February 2008, we suggest that the primary period of MeHg export from Yolo Bypass Wildlife Area is during those winter flooding periods when overall microbial activity and MeHg production in agricultural soils is fueled by the decomposition of rice straw, and when hydrologic flowthrough is maximal. Local stakeholders participated in two workshops related to this study, demonstrating an interest in understanding factors controlling MeHg production, export, and bioaccumulation. The results of this field study show that permanently flooded, naturally vegetated wetlands are unlikely to a large source of MeHg production within the YBWA, in contrast with agriculturally-managed wetlands. MeHg loading to Toe Drain waters of the Yolo Bypass may be reduced by lowering rated of hydrologic export from agricultural wetlands during the growing season and especially during rice harvest, However, under these water-holding conditions, biota living within agricultural wetlands may thus be exposed to higher MeHg concentrations in surface water, As observed in this study, rapid bioacculumaltion over a 2-month period led to MeHg concentrations in invertebrates and fish more than 6 and 11 times higher, respectively, than proposed TMDL target values to protect wildlife (0.03 ppm ww). The results of this field study, together with the information from YBWA stakeholders, provide a more definitive understanding of how MeHg cycling and bioaccumulation respond to habitat differences and specific management practices. These results directly address 4 core components of CBDA's Mercury Strategy for the Bay-Delta Ecosystem (Wiener et al., 2003a): a) Quantification and evaluation of THg and MeHg sources, b) Quantification of effects of ecosystem restoration on MeHg exposure, c) Assessment of ecological risk, and d) Identification and testing of potential management approaches for reducing MeHg contamination. In addition, the quantitative results reported here assess the effect of current land use practices in the Yolo Bypass MeHg production, bioaccumulation and export, and provide process-based advice towards achieving current goals of the RWQCB-CVR's Sacramento -- San Joaquin Delta Estuary TMDL for Methyl & Total Mercury (Wood et al., 2010b). Further work is necessary to evaluate biotic exposure in the Yolo Bypass Wildlife Area at higher trophic levels (e.g. birds), to quantify winter hydrologic flux of MeHg to the larger Delta ecosystem, and to evaluate rice straw management options to limit labile carbon supplies to surface sediment during winter months. In summary, agricultural management of rice fields -- specifically the periodic flooding and production of easily degraded organic matter -- promotes the production of MeHg beyond rates seen in naturally vegetated wetlands, whether seasonally or permanently flooded., The exported load from MeHg from these agricultural wetlands may be controlled by limiting hydrologic export from fields to enhance on-site MeHg removal processes, but the tradeoff is that this impoundement increases Me Hg exposure to resident organisms.

California↗

USGS2014

Predicted changes in climatic niche and climate refugia of conservation priority salamander species in the northeastern United States

Global climate change represents one of the most extensive and pervasive threats to wildlife populations. Amphibians, specifically salamanders, are particularly susceptible to the effects of changing climates due to their restrictive physiological requirements and low vagility; however, little is known about which landscapes and species are vulnerable to climate change. Our study objectives included, (1) evaluating species-specific predictions (based on 2050 climate projections) and vulnerabilities to climate change and (2) using collective species responses to identify areas of climate refugia for conservation priority salamanders in the northeastern United States. All evaluated salamander species were projected to lose a portion of their climatic niche. Averaged projected losses ranged from 3%–100% for individual species, with the Cow Knob Salamander ( Plethodon punctatus ), Cheat Mountain Salamander ( Plethodon nettingi ), Shenandoah Mountain Salamander ( Plethodon virginia ), Mabee’s Salamander ( Ambystoma mabeei ), and Streamside Salamander ( Ambystoma barbouri ) predicted to lose at least 97% of their landscape-scale climatic niche. The Western Allegheny Plateau was predicted to lose the greatest salamander climate refugia richness ( i.e. , number of species with a climatically-suitable niche in a landscape patch), whereas the Central Appalachians provided refugia for the greatest number of species during current and projected climate scenarios. Our results can be used to identify species and landscapes that are likely to be further affected by climate change and potentially resilient habitats that will provide consistent climatic conditions in the face of environmental change.

Forests↗

USGS2021

Patterns and processes of pathogen exposure in gray wolves across North America

The presence of many pathogens varies in a predictable manner with latitude, with infections decreasing from the equator towards the poles. We investigated the geographic trends of pathogens infecting a widely distributed carnivore: the gray wolf ( Canis lupus ). Specifically, we investigated which variables best explain and predict geographic trends in seroprevalence across North American wolf populations and the implications of the underlying mechanisms. We compiled a large serological dataset of nearly 2000 wolves from 17 study areas, spanning 80° longitude and 50° latitude. Generalized linear mixed models were constructed to predict the probability of seropositivity of four important pathogens: canine adenovirus, herpesvirus, parvovirus, and distemper virus—and two parasites: Neospora caninum and Toxoplasma gondii . Canine adenovirus and herpesvirus were the most widely distributed pathogens, whereas N. caninum was relatively uncommon. Canine parvovirus and distemper had high annual variation, with western populations experiencing more frequent outbreaks than eastern populations. Seroprevalence of all infections increased as wolves aged, and denser wolf populations had a greater risk of exposure. Probability of exposure was positively correlated with human density, suggesting that dogs and synanthropic animals may be important pathogen reservoirs. Pathogen exposure did not appear to follow a latitudinal gradient, with the exception of N. caninum . Instead, clustered study areas were more similar: wolves from the Great Lakes region had lower odds of exposure to the viruses, but higher odds of exposure to N. caninum and T. gondii ; the opposite was true for wolves from the central Rocky Mountains. Overall, mechanistic predictors were more informative of seroprevalence trends than latitude and longitude. Individual host characteristics as well as inherent features of ecosystems determined pathogen exposure risk on a large scale. This work emphasizes the importance of biogeographic wildlife surveillance, and we expound upon avenues of future research of cross-species transmission, spillover, and spatial variation in pathogen infection.

Alaska, Alberta, Arizona, British Columbia, Michig↗

USGS2018

Phase 1 studies summary of major findings of the South Bay Salt Pond Restoration Project, South San Francisco Bay, California

Executive Summary The South Bay Salt Pond Restoration Project (Project) is one of the largest restoration efforts in the United States. It is located in South San Francisco Bay of California. It is unique not only for its size—more than 15,000 acres—but also for its location adjacent to one of the nation’s largest urban areas, home to more than 4 million people (Alameda, Santa Clara, and San Mateo Counties). The Project is intended to restore and enhance wetlands in South San Francisco Bay while providing for flood management, wildlife-oriented public access, and recreation. Restoration goals of the project are to provide a mosaic of saltmarsh habitat to benefit marsh species and managed ponds to benefit waterbirds, throughout 3 complexes and 54 former salt ponds. Although much is known about the project area, significant uncertainties remain with a project of this geographic and temporal scale of an estimated 50 years to complete the restoration. For example, in order to convert anywhere from 50 to 90 percent of the existing managed ponds to saltmarsh habitat, conservation managers first enhance the habitat of managed ponds in order to increase use by waterbirds, and provide migratory, wintering, and nesting habitat for more than 90 species of waterbirds. Project managers have concluded that the best way to address these uncertainties is to carefully implement the project in phases and learn from the outcome of each phase. The Adaptive Management Plan (AMP) identifies specific restoration targets for multiple aspects of the Project and defines triggers that would necessitate some type of management action if a particular aspect is trending negatively. U.S. Geological Survey (USGS) biologist Laura Valoppi served as the project Lead Scientist and oversaw implementation of the AMP in coordination with other members of the Project Management Team (PMT), comprised of representatives from the California State Coastal Conservancy, California Department of Fish and Wildlife, the Santa Clara Valley Water District, the U.S. Army Corps of Engineers, and the U.S. Fish and Wildlife Service. To implement the AMP, the PMT have selected and funded applied studies and monitoring projects to address key uncertainties. This information is used by the PMT to make decisions about current management of the project area and future restoration actions in order to meet project. This document summarizes the major scientific findings from studies conducted from 2009 to 2016, as part of the science program that was conducted in conjunction with Phase 1 restoration and management actions. Additionally, this report summarizes the management response to the study results under the guidance of the AMP framework and provides a list of suggested studies to be conducted in “Phase 2–A scorecard summarizing the Project’s progress toward meeting the AMP goals for a range of Project objectives.” The scoring to date indicates that the Project is meeting or exceeding expectations for sediment accretion and western snowy plover ( Charadrius alexandrinus nivosus ) recovery. There is uncertainty with respect to objectives for California gulls ( Larus californicus ), California least tern ( Sternula antillarum ), steelhead trout ( Oncorhynchus mykiss ), and regulatory water quality objectives. Water quality and algal blooms, specifically of the managed ponds, is indicated as trending negative. However, the vast majority of objectives are trending positive, including increased abundance for a number of bird guilds, increasing marsh habitat, maintenance of mudflats, visitor experience, estuarine fish numbers, and special-status marsh species numbers.

California↗

USGS2020

Co-occurrence and occupancy dynamics of mourning doves and Eurasian collared-doves

Understanding how land cover and potential competition with invasive species shape patterns of occupancy, extirpation, and colonization of native species across a landscape can help target management for declining native populations. Mourning dove ( Zenaida macroura ) populations have declined throughout the United States from 1965–2015. The expansion of the Eurasian collared‐dove ( Streptopelia decaocto ), an introduced species with similar food preferences, may further threaten mourning dove populations. We analyzed data from 2009–2016 from a large‐scale monitoring program in the Western Great Plains of the United States in a 2‐species occupancy model to assess the effects of collared‐doves on mourning dove distributions, while accounting for imperfect detection and variation in land cover across the landscape. Mourning dove occupancy was stable or increasing across our study area, and despite overlap in resource use and co‐occurrence between mourning doves and Eurasian collared‐doves, we found no evidence that collared‐doves are extirpating mourning doves from preferred habitat during the breeding season.

Texas, Oklahoma, Kansas, Nebraska, South Dakota, N↗

USGS2000

Day-roosts of female long-eared myotis in western Oregon

Roosts are a critical habitat component for bats and may influence their survival and fitness. We used radiotelemetry to investigate characteristics of day-roosts of female long-eared myotis ( Myotis evotis ) in watersheds characterized by different forest conditions and the spatial relationships between day-roosts and available water. We tracked 21 bats to 73 roosts ( n = 102 occasions) from June to August 1996 and 1997 on the western slope of the Cascade Mountains, Oregon. Bats primarily used conifer stumps as day-roosts in watersheds dominated by younger forests and used conifer snags, and to a lesser extent conifer stumps, in watersheds with greater proportions of older forests. Individual long-eared myotis used different types of structures as day-roosts, and type of structure used did not differ with reproductive condition. Day-roosts were primarily located in upslope habitat and averaged 0.59 ± 0.03 km from available water and 0.66 ± 0.02 km from capture sites. Roosts were not located closer to available water than random points, but were closer than random points to captures sites. Conifer snags used as day-roosts averaged 34 ± 5 m in height and 93 ± 12 cm diameter at breast height (dbh); snags in intermediate stages of decay had highest use. Use of conifer snags was positively associated with the number of snags within 20 m and negatively associated with distance from stand edge. Conifer stumps used as day-roosts averaged 133 ± 9 cm in height and 59 ± 4 cm dbh. Western hemlock and Douglas-fir stumps were used more often than western redcedar stumps as day-roosts. Odds of a stump being used as a day-roost increased with increasing height of the stump (downhill side) and whether it was situated in a gap in vegetation. We contend that management of day-roosts for forest-dwelling bats should focus on maintaining large conifer snags across landscapes through space and time. In landscapes where there are relatively few large conifer snags, stumps appear to provide important, but ephemeral, roosts for long-eared myotis.

Oregon↗

USGS2013

Statewide summary for Alabama

Alabama is over 132,000 km 2 (51,000 miles 2 ) in area, 483 km (300 miles) long, and 322 km (200 miles) wide (Copeland, 1968). Coastal Alabama comprises Mobile and Baldwin Counties and the surrounding State waters in the Gulf of Mexico (Figure 1; O’Neil and Mettee, 1982). It is part of both the East Gulf Coastal Plain section of the Coastal Plain province and the Mississippi-Alabama shelf section of the Continental Shelf province. Within the East Gulf Coastal Plain section, Alabama’s coastal land falls within the Southern Pine Hills and Coastal Lowlands subdivisions. The Southern Pine Hills subdivision is a sloping landscape composed of sand and clay. Its elevation varies from approximately 30 m (98 ft) near the coast to over 90 m (295 ft) in the northern areas of the two coastal counties. The Coastal Lowlands subdivision is a flat to slightly undulating plain with creeks, rivers, estuaries, and marshes leading to the surrounding bays and the Gulf of Mexico. Offshore Alabama is part of the Mississippi-Alabama section of the Continental Shelf. Barrier islands and spits in coastal Alabama include Dauphin Island, Fort Morgan Peninsula, and Perdido Key. Dauphin Island consists of a beach with dunes on the Gulf side and beaches and marshes on the north side. It was once over 24 km long, but after Hurricane Katrina it has been broken into two distinct islands. Fort Morgan Peninsula is attached to the eastern mainland and extends westward between Mobile Bay and the Gulf of Mexico. A large beach exists on the gulf side, with numerous lagoons and marshes on the bayside. Perdido Key is a narrow peninsula on the easternmost Alabama coast near the Alabama-Florida border, south of Perdido Bay. It consists of beaches and high dunes, with some marshes on the lagoon side of the peninsula. Mobile Bay, parts of Mississippi Sound, Perdido Bay, and many smaller rivers and streams are the main bodies of water in coastal Alabama. Mobile Bay, a submerged river valley, is the largest at 1,070 km 2 (413 miles 2 ) in area and 51.5 km (32 miles) in length (Mobile Bay NEP, 2008). Mobile Bay is 37 km (23 miles) wide at its maximum width near the opening to the Gulf of Mexico at the south end of the bay, and 16.1 km (10 miles) wide at the city of Mobile (Mobile Bay NEP, 2003; Mobile Bay NEP, 2008). It is remarkably shallow with an average depth of 3 m (10 ft), yet it discharges approximately 1,755.6 m 3 (62,000 ft 3 ) of water every second on average (Mobile Bay NEP, 2008). Mississippi Sound runs parallel to the coasts of Mississippi and part of Alabama. The length of the Alabama portion of Mississippi Sound is approximately 26 km (16.2 miles) from the Dauphin Island bridge to the Mississippi-Alabama State line (O’Neil and Mettee, 1982). Dauphin Island separates the sound from the Gulf of Mexico. The sound drains into the Gulf of Mexico west of Dauphin Island at Petit Bois Pass, which is approximately 8 km (5 miles) wide. Mississippi Sound averages approximately 3.5 m (11.5 ft) in depth. Salt marshes, large areas of wetland scrub-shrub, and tidal creeks characterize the northern shore of Mississippi Sound, and the southern shore is composed of sandy barrier islands. Perdido Bay is located at the boundary of Baldwin County and Florida’s Escambia County. It is approximately 27 km (16.8 miles) long, 5 km (3 miles) at its widest point, and, on average, 2.4 m (7.9 ft) deep. The major fresh-water resource in coastal Alabama is the Mobile River, formed by the confluence of the Alabama and Tombigbee Rivers. The watershed for the Mobile River is approximately 111,369 km 2 (43,000 miles 2 ) large and includes parts of Alabama, Georgia, Mississippi, and Tennessee (Handley et al., 2007). Parts of Alabama and the Florida Panhandle drain into the Perdido River basin and western coastal Alabama drains into the Escatawpa River. Emergent wetlands offer valuable ecological services in coastal Alabama. Marshes provide extensive plant material, which provides energy to the detritus-based estuarine ecological system (O’Neil et al., 1983). They provide habitat for many organisms, including shrimp and crabs, whose harvest is a major industry in coastal Alabama. Marshes provide habitat for refuge, feeding, breeding, and spawning. They also remove excess nutrients from water and contribute to erosion control. Degradation of marshes by pollutants, sediments, and other impacts decreases productivity of the entire estuarine ecosystem. Among the nation’s states, Alabama ranks fifth in number of different species (144 endemic species), second in number of extinctions that have already occurred (90 extinct species) and fourth in number of species at risk for extinction (14.8% at risk out of 4,533 total species; Stein, 2002). Many species of wildlife benefit from the wetland habitats in coastal Alabama. Numerous bird species can be found in coastal Alabama emergent marshes, which provide habitat for shore- and wading-birds that inhabit salt or brackish water coastal environments (Anderson et al., 1981). Colonial seabirds nest on coastal Alabama’s islands, the mainland, and dredge disposal sites (Cooley, 1987). The Mobile-Tensaw Delta and Mobile Bay are the state’s primary migratory waterfowl coastal wintering areas (U.S. Fish and Wildlife Service, 1982). The shallow waters, abundance of fish, and vegetative cover in emergent marsh contribute to excellent waterfowl habitat. Emergent wetlands in Alabama also provide habitat for a multitude of endangered species, including various species of raptors and wading- and shorebirds (O’Neil et al., 1983).

Alabama↗

USGS2014

Temporal variation in fish mercury concentrations within lakes from the western Aleutian Archipelago, Alaska

We assessed temporal variation in mercury (Hg) concentrations of threespine stickleback ( Gasterosteus aculeatus ) from Agattu Island, Aleutian Archipelago, Alaska. Total Hg concentrations in whole-bodied stickleback were measured at two-week intervals from two sites in each of two lakes from June 1 to August 10, 2011 during the time period when lakes were ice-free. Across all sites and sampling events, stickleback Hg concentrations ranged from 0.37–1.07 µg/g dry weight (dw), with a mean (± SE) of 0.55±0.01 µg/g dw. Mean fish Hg concentrations declined by 9% during the study period, from 0.57±0.01 µg/g dw in early June to 0.52±0.01 µg/g dw in mid-August. Mean fish Hg concentrations were 6% higher in Loon Lake (0.56±0.01 µg/g dw) than in Lake 696 (0.53±0.01 µg/g dw), and 4% higher in males (0.56±0.01 µg/g dw) than in females (0.54±0.01 µg/g dw). Loon Lake was distinguished from Lake 696 by the presence of piscivorous waterbirds during the breeding season. Mercury concentrations in stickleback from Agattu Island were higher than would be expected for an area without known point sources of Hg pollution, and high enough to be of concern to the health of piscivorous wildlife.

Alaska↗

USGS2000

Modeling annual mallard production in the prairie-parkland region

Biologists have proposed several environmental factors that might influence production of mallards ( Anas platyrhynchos ) nesting in the prairie-parkland region of the United States and Canada. These factors include precipitation, cold spring temperatures, wetland abundance, and upland breeding habitat. I used long-term historical data sets of climate, wetland numbers, agricultural land use, and size of breeding mallard populations in multiple regression analyses to model annual indices of mallard production. Models were constructed at 2 scales: a continental scale that encompassed most of the mid-continental breeding range of mallards and a stratum-level scale that included 23 portions of that same breeding range. The production index at the continental scale was the estimated age ratio of mid-continental mallards in early fall; at the stratum scale my production index was the estimated number of broods of all duck species within an aerial survey stratum. Size of breeding mallard populations in May, and pond numbers in May and July, best modeled production at the continental scale. Variables that best modeled production at the stratum scale differed by region. Crop variables tended to appear more in models for western Canadian strata; pond variables predominated in models for United States strata; and spring temperature and pond variables dominated models for eastern Canadian strata. An index of cold spring temperatures appeared in 4 of 6 models for aspen parkland strata, and in only 1 of 11 models for strata dominated by prairie. Stratum-level models suggest that regional factors influencing mallard production are not evident at a larger scale. Testing these potential factors in a manipulative fashion would improve our understanding of mallard population dynamics, improving our ability to manage the mid-continental mallard population.

Alberta, Manitoba, Montana, North Dakota, Saskatch↗

USGS2026

Estimating GPS-based social aggregation metrics using collar data

Understanding social aggregation patterns in ungulate herds is essential for gaining behavioral insights, optimizing resource use, reducing human-wildlife conflict, and managing disease risk. As chronic wasting disease is the preeminent disease-related threat to cervid populations in North America, knowledge of contact between individuals and spatiotemporal patterns of aggregation provides opportunity to understand and potentially reduce disease risk while supporting sustainable population sizes. Herd density metrics, derived from global positioning system (GPS) data, can be used to inform management decisions. To effectively compare aggregation behavior within and between herds, aggregation metrics must be accurate. However, the consistency of metrics across different GPS collar sample sizes remains unclear and robust studies of big game require understanding how these factors may vary in different contexts. We examined the minimum sample size necessary for reliable calculations of three aggregation metrics: pairwise inter-animal distances, daily proximity rates, and kernel density estimate (KDE) areas. We used GPS collar data from the Jackson and West Green River elk herds ( Cervus canadensis ) in western Wyoming, USA, that differ in herd size and group structure (single versus multiple sub-groups), representing common practical contexts. Elk locations were acquired for the Jackson herd between 2016 and 2019 and from 2005 to 2010 for the West Green River herd. Herd-specific characteristics substantially influence the sample size necessary for accurate density measurements. As predicted, larger herds with many groups require more GPS collars than small herds with fewer groups. The sample size needed to accurately estimate aggregation varies by metric, with KDE areas, useful for indexing environmentally transmitted disease risk, generally requiring fewer samples, especially in high-density contexts. The required sample size also varies with seasonal changes in density. During periods of highest density, similar sample sizes are required to estimate inter-animal distances and proximity rates regardless of herd characteristics. Our results have implications for costs associated with studying big game herds, indicating fewer collars may be sufficient in some cases. These insights can aid researchers and managers in determining the appropriate number of GPS collars required for effective herd monitoring and informing relevant aggregation metrics for their management goals.

Wyoming↗

USGS2014

Beyond reducing fire hazard: fuel treatment impacts on overstory tree survival

Fuel treatment implementation in dry forest types throughout the western United States is likely to increase in pace and scale in response to increasing incidence of large wildfires. While it is clear that properly implemented fuel treatments are effective at reducing hazardous fire potential, there are ancillary ecological effects that can impact forest resilience either positively or negatively depending on the specific elements examined, as well as treatment type, timing, and intensity. In this study, we use overstory tree growth responses, measured seven years after the most common fuel treatments, to estimate forest health. Across the five species analyzed, observed mortality and future vulnerability were consistently low in the mechanical-only treatment. Fire-only was similar to the control for all species except Douglas-fir, while mechanical-plus-fire had high observed mortality and future vulnerability for white fir and sugar pine. Given that overstory trees largely dictate the function of forests and services they provide (e.g., wildlife habitat, carbon sequestration, soil stability) these results have implications for understanding longer-term impacts of common fuel treatments on forest resilience.

Ecological Applications↗

USGS2020

The biggest bang for the buck: Cost‐effective vegetation treatment outcomes across drylands of the western United States

Restoration and rehabilitation are globally implemented to improve ecosystem condition but often without tracking treatment expenditures relative to ecological outcomes. We evaluated the cost‐effectiveness of widely conducted woody plant and herbaceous invasive plant removals and seeding treatments in drylands of the western United States from 2004 to 2018 to determine how land managers can optimize efforts. Woody plant cover decreased at a similar rate per dollar spent regardless of vegetation removal type, and the dominant invasive species was reduced by herbicide application. Relatively inexpensive herbicide application also had a large positive effect on seeded perennial grass cover that was enhanced by additional cost; while expensive woody mastication treatments had little effect regardless of additional cost. High seed cost was driven by including a large proportion of native species in seed mixes, and combined with high seeding cost, promoted a short‐term (2–3 yr) gain in perennial forb cover and species richness. In contrast, seeding and seed mix cost had no bearing on seeded perennial grass cover, in part, because relatively cheap nonnative seeded species rapidly increased in cover. Our results suggest the differential benefits of commonly implemented treatments aimed at reducing wildfire risk, improving wildlife habitat and forage, and reducing erosion. Given the growing need and cost of restoration and rehabilitation, we raise the importance of specifying treatment budgets and objectives, coupled with effectiveness monitoring, to improve future outcomes.

Utah↗

USGS2022

Decadal-scale phenology and seasonal climate drivers of migratory baleen whales in a rapidly warming marine ecosystem

Species' response to rapid climate change can be measured through shifts in timing of recurring biological events, known as phenology. The Gulf of Maine is one of the most rapidly warming regions of the ocean, and thus an ideal system to study phenological and biological responses to climate change. A better understanding of climate-induced changes in phenology is needed to effectively and adaptively manage human-wildlife conflicts. Using data from a 20+ year marine mammal observation program, we tested the hypothesis that the phenology of large whale habitat use in Cape Cod Bay has changed and is related to regional-scale shifts in the thermal onset of spring. We used a multi-season occupancy model to measure phenological shifts and evaluate trends in the date of peak habitat use for North Atlantic right ( Eubalaena glacialis ), humpback ( Megaptera novaeangliae ), and fin ( Balaenoptera physalus ) whales. The date of peak habitat use shifted by +18.1 days (0.90 days/year) for right whales and +19.1 days (0.96 days/year) for humpback whales. We then evaluated interannual variability in peak habitat use relative to thermal spring transition dates (STD), and hypothesized that right whales, as planktivorous specialist feeders, would exhibit a stronger response to thermal phenology than fin and humpback whales, which are more generalist piscivorous feeders. There was a significant negative effect of western region STD on right whale habitat use, and a significant positive effect of eastern region STD on fin whale habitat use indicating differential responses to spatial seasonal conditions. Protections for threatened and endangered whales have been designed to align with expected phenology of habitat use. Our results show that whales are becoming mismatched with static seasonal management measures through shifts in their timing of habitat use, and they suggest that effective management strategies may need to alter protections as species adapt to climate change.

Massachusetts↗

USGS2013

Evidence of songbird intoxication from Rozol application at a black-tailed prairie dog colony

Concerns about avian poisonings from anticoagulant rodenticides have traditionally focused on secondary poisoning of raptors exposed by feeding on contaminated mammalian prey. However, ground foraging songbirds can be directly poisoned from operational applications of the anticoagulant rodenticide Rozol® (0.005% chlorophacinone, active ingredient) applied as a grain bait, at black-tailed prairie dog Cynomys ludovicianus colonies. A dead western meadowlark Sturnella neglecta recovered from the study prairie dog colony displayed hemorrhaging in brain and pectoral muscle tissue, and it contained chlorophacinone residue concentrations of 0.59 and 0.49 µg/g (wet weight) in the liver and intestinal contents, respectively. Chlorophacinone residues from two Rozol-colored songbird droppings found at the study colony were 0.09 and 0.46 µg/g (wet weight). The timing of the meadowlark mortality and the occurrence of discolored droppings show that songbird exposure and poisoning can occur weeks after a Rozol application.

Colorado↗