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At least 559 records · Page 31Linked to original sources
USGS2009

Experimental Advanced Airborne Research Lidar (EAARL) Data Processing Manual

The Experimental Advanced Airborne Research Lidar (EAARL) is an example of a Light Detection and Ranging (Lidar) system that utilizes a blue-green wavelength (532 nanometers) to determine the distance to an object. The distance is determined by recording the travel time of a transmitted pulse at the speed of light (fig. 1). This system uses raster laser scanning with full-waveform (multi-peak) resolving capabilities to measure submerged topography and adjacent coastal land elevations simultaneously (Nayegandhi and others, 2009). This document reviews procedures for the post-processing of EAARL data using the custom-built Airborne Lidar Processing System (ALPS). ALPS software was developed in an open-source programming environment operated on a Linux platform. It has the ability to combine the laser return backscatter digitized at 1-nanosecond intervals with aircraft positioning information. This solution enables the exploration and processing of the EAARL data in an interactive or batch mode. ALPS also includes modules for the creation of bare earth, canopy-top, and submerged topography Digital Elevation Models (DEMs). The EAARL system uses an Earth-centered coordinate and reference system that removes the necessity to reference submerged topography data relative to water level or tide gages (Nayegandhi and others, 2006). The EAARL system can be mounted in an array of small twin-engine aircraft that operate at 300 meters above ground level (AGL) at a speed of 60 meters per second (117 knots). While other systems strive to maximize operational depth limits, EAARL has a narrow transmit beam and receiver field of view (1.5 to 2 milliradians), which improves the depth-measurement accuracy in shallow, clear water but limits the maximum depth to about 1.5 Secchi disk depth (~20 meters) in clear water. The laser transmitter [Continuum EPO-5000 yttrium aluminum garnet (YAG)] produces up to 5,000 short-duration (1.2 nanosecond), low-power (70 microjoules) pulses each second. Each pulse is focused into an illumination area that has a radius of about 20 centimeters on the ground. The pulse-repetition frequency of the EAARL transmitter varies along each across-track scan to produce equal cross-track sample spacing and near uniform density (Nayegandhi and others, 2006). Targets can have varying physical and optical characteristics that cause extreme fluctuations in laser backscatter complexity and signal strength. To accommodate this dynamic range, EAARL has the real-time ability to detect, capture, and automatically adapt to each laser return backscatter. The backscattered energy is collected by an array of four high-speed waveform digitizers connected to an array of four sub-nanosecond photodetectors. Each of the four photodetectors receives a finite range of the returning laser backscatter photons. The most sensitive channel receives 90% of the photons, the least sensitive receives 0.9%, and the middle channel receives 9% (Wright and Brock, 2002). The fourth channel is available for detection but is not currently being utilized. All four channels are digitized simultaneously into 65,536 samples for every laser pulse. Receiver optics consists of a 15-centimeter-diameter dielectric-coated Newtonian telescope, a computer-driven raster scanning mirror oscillating at 12.5 hertz (25 rasters per second), and an array of sub-nanosecond photodetectors. The signal emitted by the pulsed laser transmitter is amplified as backscatter by the optical telescope receiver. The photomultiplier tube (PMT) then converts the optical energy into electrical impulses (Nayegandhi and others, 2006). In addition to the full-waveform resolving laser, the EAARL sensor suite includes a down-looking 70-centimeter-resolution Red-Green-Blue (RGB) digital network camera, a high-resolution color infrared (CIR) multispectral camera (14-centimeter-resolution), two precision dual-frequency kinematic carrier-phase global positioning system (GPS) receivers, and an

Open-File Report↗
USGS2013

Extreme ground motions and Yucca Mountain

Yucca Mountain is the designated site of the underground repository for the United States' high-level radioactive waste (HLW), consisting of commercial and military spent nuclear fuel, HLW derived from reprocessing of uranium and plutonium, surplus plutonium, and other nuclear-weapons materials. Yucca Mountain straddles the western boundary of the Nevada Test Site, where the United States has tested nuclear devices since the 1950s, and is situated in an arid, remote, and thinly populated region of Nevada, ~100 miles northwest of Las Vegas. Yucca Mountain was originally considered as a potential underground repository of HLW because of its thick units of unsaturated rocks, with the repository horizon being not only ~300 m above the water table but also ~300 m below the Yucca Mountain crest. The fundamental rationale for a geologic (underground) repository for HLW is to securely isolate these materials from the environment and its inhabitants to the greatest extent possible and for very long periods of time. Given the present climate conditions and what is known about the current hydrologic system and conditions around and in the mountain itself, one would anticipate that the rates of infiltration, corrosion, and transport would be very low—except for the possibility that repository integrity might be compromised by low-probability disruptive events, which include earthquakes, strong ground motion, and (or) a repository-piercing volcanic intrusion/eruption. Extreme ground motions (ExGM), as we use the phrase in this report, refer to the extremely large amplitudes of earthquake ground motion that arise at extremely low probabilities of exceedance (hazard). They first came to our attention when the 1998 probabilistic seismic hazard analysis for Yucca Mountain was extended to a hazard level of 10 -8 /yr (a 10-4/yr probability for a 10 4 -year repository “lifetime”). The primary purpose of this report is to summarize the principal results of the ExGM research program as they have developed over the past 5 years; what follows will be focused on Yucca Mountain, but not restricted to it.

Nevada↗
USGS2012

Coastal impacts, adaptation, and vulnerabilities: a technical input to the 2013 National Climate Assessment

The coast has long provided communities with a multitude of benefits including an abundance of natural resources that sustain economies, societies, and ecosystems. Coasts provide natural harbors for commerce, trade, and transportation; beaches and shorelines that attract residents and tourists; and wetlands and estuaries that are critical for fisheries and water resources. Coastal ecosystems provide critical functions to cycle and move nutrients, store carbon, detoxify wastes, and purify air and water. These areas also mitigate floods and buffer against coastal storms that bring high winds and salt water inland and erode the shore. Coastal regions are critical in the development, transportation, and processing of oil and natural gas resources and, more recently, are being explored as a source of energy captured from wind and waves. The many benefits and opportunities provided in coastal areas have strengthened our economic reliance on coastal resources. Consequently, the high demands placed on the coastal environment will increase commensurately with human activity. Because 35 U.S. states, commonwealths, and territories have coastlines that border the oceans or Great Lakes, impacts to coastline systems will reverberate through social, economic, and natural systems across the U.S. Impacts on coastal systems are among the most costly and most certain consequences of a warming climate (Nicholls et al., 2007). The warming atmosphere is expected to accelerate sea-level rise as a result of the decline of glaciers and ice sheets and the thermal expansion of sea water. As mean sea level rises, coastal shorelines will retreat and low-lying areas will tend to be inundated more frequently, if not permanently, by the advancing sea. As atmospheric temperature increases and rainfall patterns change, soil moisture and runoff to the coast are likely to be altered. An increase in the intensity of climatic extremes such as storms and heat spells, coupled with other impacts of climate change and the effects of human development, could affect the sustainability of many existing coastal communities and natural resources. This report, one of a series of technical inputs for the third NCA conducted under the auspices of the U.S. Global Change Research Program, examines the known effects and relationships of climate change variables on the coasts of the U.S. It describes the impacts on natural and human systems, including several major sectors of the U.S. economy, and the progress and challenges to planning and implementing adaptation options. Below we present the key findings from each chapter of the report, beginning with the following key findings from Chapter 1: Introduction and Context.

Book↗
USGS2016

Controls on ferromanganese crust composition and reconnaissance resource potential, Ninetyeast Ridge, Indian Ocean

A reconnaissance survey of Fe-Mn crusts from the 5000 km long (~31°S to 10°N) Ninetyeast Ridge (NER) in the Indian Ocean shows their widespread occurrence along the ridge as well as with water depth on the ridge flanks. The crusts are hydrogenetic based in growth rates and discrimination plots. Twenty samples from 12 crusts from 9 locations along the ridge were analyzed for chemical and mineralogical compositions, growth rates, and statistical relationships (Q-mode factor analysis, correlation coefficients) were calculated. The crusts collected are relatively thin (maximum 40 mm), and those analyzed varied from 4 mm to 32 mm. However, crusts as thick as 80 mm can be expected to occur based on the age of rocks that comprise the NER and the growth rates calculated here. Growth rates of the crusts increase to the north along the NER and with water depth. The increase to the north resulted from an increased supply of Mn from the oxygen minimum zone (OMZ) to depths below the OMZ combined with an increased supply of Fe at depth from the dissolution of biogenic carbonate and from deep-sourced hydrothermal Fe. These increased supplies of Fe increased growth rates of the deeper-water crusts along the entire NER. Because of the huge terrigenous (rivers, eolian, pyroclastic) and hydrothermal (three spreading centers) inputs to the Indian Ocean, and the history of primary productivity, Fe-Mn crust compositions vary from those analyzed from open-ocean locations in the Pacific. The sources of detrital material in the crusts changed along the NER and reflect, from north to south, the decreasing influence of the Ganga River system and volcanic arcs located to the east, with increasing influence of sediment derived from Australia to the south. In addition, weathering of NER basalt likely contributed to the aluminosilicate fraction of the crusts. The southernmost sample has a relatively large detrital component compared to other southern NER crust samples, which was probably derived predominantly from weathering of local volcanic outcrops. Fe-Mn crusts from a dredge haul at 3412 m water depth, 2°S latitude, are pervasively phosphatized along with the substrate rocks (site D7). Phosphatization took place through replacement of carbonate, preferential replacement of Fe oxyhydroxide relative to Mn oxide in the crusts, preferential replacement of silica-rich phases relative to Al-rich phases in the crusts, and precipitation of carbonate fluorapatite in pore space. The preferentially replaced silica may have been Si adsorbed on the Fe oxyhydroxide. The enrichment of Ni, Zn, and Cu in the phosphatized crust reflects preferential adsorption into the tunnel structure of todorokite. The rare earth element plus yttrium (REY) patterns indicate a lower oxidation potential during phosphatization of the NER crusts compared to Pacific phosphatized crusts. NER phosphatization occurred in a deeper-water environment than typical for phosphatization of Pacific crusts, occurred post-middle Miocene, a younger age than phosphatization the Pacific crusts, and had in part a different set of chemical changes produced by the phosphatization than did the Pacific crusts. The southern third of NER has Fe-Mn crusts with the highest Co (0.91%), Ni (0.43%), ΣREY (0.33%), Cu (0.22%), Te (146 ppm), Pt (1.5 ppm), Ru (52 ppb), and Rh (99 ppb) contents. These are among the highest Pt, Ru, and Rh concentrations measured in marine Fe-Mn deposits. Because of these high metal concentrations, exploration is warranted for the southern sector of the NER, especially at shallower-water sites where the platinum group elements (PGE) and Co are likely to be even more enriched.

Deep-Sea Research Part I: Oceanographic Research P↗
USGS2010

Predictions of turbidity due to enhanced sediment resuspension resulting from sea-level rise on a fringing Coral Reef: Evidence from Molokai, Hawaii

Accelerating sea-level rise associated with global climate change will affect sedimentary processes on coral reefs and other shoreline environments by increasing energy and sediment resuspension. On reefs, sedimentation is known to increase coral stress and bleaching as particles that settle on coral surfaces interfere with photosynthesis and feeding, and turbidity induced by suspended sediment reduces incident light levels. Using relationships developed from observations of wave orbital velocity, water-surface elevation, and suspended-sediment concentration on a fringing reef flat of Molokai, Hawaii, predictions of the average daily maximum in suspended-sediment concentration increase from ~11 mg/l to ~20 mg/l with 20 cm sea-level rise. The duration of time concentrations exceeds 10 mg/l increases from 9 to 37. An evaluation of the reduction of wave energy flux through breaking and frictional dissipation across the reef flat shows an increase of ~80 relative to the present will potentially reach the shoreline as sea level increases by 20 cm. Where the shoreline exists on low, flat terrain, the increased energy could cause significant erosion of the shoreline. Considering the sediment budget, the sediment flux is predicted to increase and removal of fine-grained sediment may be expedited on some fringing reefs, and sediment in storage on the inner reef could ultimately be reduced. However, increased shoreline erosion may add sediment and offset removal from the reef flat. The shifts in sediment availability and transport that will occur as result of a modest increase in sea level have wide application to fringing coral reefs elsewhere, as well as other shoreline environments. ?? 2010 the Coastal Education & Research Foundation (CERF).

Journal of Coastal Research↗
USGS2010

Solute erosion and chloride balance in selected river basins of the western conterminous United States

The estimated average rates of annual solute erosion in 11 important western river basins range from 180 tons per square mile (Willamette basin) to 4.2 tons per square mile (Gila basin). An average rate of 58 tons per square mile is indicated for the entire 545,000‐square‐mile area drained by the 11 rivers. The wide range in tonnage is the result of a complex of causes, among which differences in geology, gross climatic environments, and activities of man are the most important. Rates of solute erosion are highest in areas of abundant precipitation and runoff, in contrast to rates of suspended‐sediment removal, which are characteristically highest in basins subjected to only 10–15 inches of effective annual precipitation. Tonnages of chloride brought into the 11 river basins by rain and snow make up an equivalent of about 1.6 to about 17% of the chloride removed in runoff during an average year. The range of percentages reflects differences in the relative importance of oceanic and continental solute contributions. This paper is not subject to U.S. copyright. Published in 1965 by the American Geophysical Union.

Water Resources Research↗
USGS2022

Mars Science Laboratory CheMin data from the Glen Torridon region and the significance of lake-groundwater interactions in interpreting mineralogy and sedimentary history

The Glen Torridon (GT) region is positioned in terrains with strong clay mineral signatures, as inferred from orbital spectroscopy. The GT campaign confirmed orbital distinctions with in situ measurements by the Mars Science Laboratory rover, Curiosity , and the CheMin X-ray diffraction instrument with of some of the highest clay mineral abundances to date. Additionally, GT is unique because of distinct phase identifications for the first time by CheMin, including: (i) Fe-carbonates, and (ii) a novel peak in the XRD patterns of some GT samples, with an interplanar spacing of at 9.2 Å. Fe-carbonates have been previously suggested from other instruments onboard, but this is the first definitive reporting by CheMin of multiple samples with Fe-carbonate. This new phase has never been observed in Gale crater with the CheMin instrument and may be a new mineral for Mars, but discrete identification still remains enigmatic because no single phase on Earth is able to account the mineralogical, geochemical, and sedimentological constraints in the GT region. Here, we modeled XRD profiles and propose an interstratified clay mineral, specifically greenalite-minnesotaite (G-M), as a reasonable candidate. The coexistence of Fe-carbonate and Fe-rich clay minerals in the GT samples, supports a conceptual model of a lacustrine groundwater mixing environment in the ancient Gale crater lake. Groundwater interaction with percolating lake waters in the sediments is common in terrestrial lacustrine settings, and the diffusion of two distinct water bodies within the subsurface can create a geochemical gradient and unique mineral front in the sediments. Ultimately, the proximity to this mixing zone controlled the secondary minerals preserved in the Jura, Knockfarril Hill, and Glasgow members of the Mt. Sharp group exposed in GT.

Journal of Geophysical Research E: Planets↗
USGS2017

Tributyltin: Advancing the science on assessing endocrine disruption with an unconventional endocrine-disrupting compound

Tributyltin (TBT) has been recognized as an endocrine disrupting chemical (EDC) for several decades. However, only in the last decade, was its primary endocrine mechanism of action (MeOA) elucidated—interactions with the nuclear retinoid-X receptor (RXR), peroxisome proliferator-activated receptor γ (PPARγ), and their heterodimers. This molecular initiating event (MIE) alters a range of reproductive, developmental, and metabolic pathways at the organism level. It is noteworthy that a variety of MeOAs have been proposed over the years for the observed endocrine-type effects of TBT; however, convincing data for the MIE was provided only recently and now several researchers have confirmed and refined the information on this MeOA. One of the most important lessons learned from years of research on TBT concerns apparent species sensitivity. Several aspects such as the rates of uptake and elimination, chemical potency, and metabolic capacity are all important for identifying the most sensitive species for a given chemical, including EDCs. For TBT, much of this was discovered by trial and error, hence important relationships and important sensitive taxa were not identified until several decades after its introduction to the environment. As recognized for many years, TBT-induced responses are known to occur at very low concentrations for molluscs, a fact that has more recently also been observed in fish species. This review explores the MeOA and effects of TBT in different species (aquatic molluscs and other invertebrates, fish, amphibians, birds, and mammals) according to the OECD Conceptual Framework for Endocrine Disruptor Testing and Assessment (CFEDTA). The information gathered on biological effects that are relevant for populations of aquatic animals was used to construct Species Sensitivity Distributions (SSDs) based on No Observed Effect Concentrations (NOECs) and Lowest Observed Effect Concentrations (LOECs). Fish appear at the lower end of these distributions, showing that they are as sensitive as molluscs, and for some species, even more sensitive. Concentrations in the range of 1 ng/L for water exposure (10 ng/g for whole-body burden) have been shown to elicit endocrine-type responses, whereas mortality occurs at water concentrations ten times higher. Current screening and assessment methodologies as compiled in the OECD CFEDTA are able to identify TBT as a potent endocrine disruptor with a high environmental risk for the original use pattern. If those approaches had been available when TBT was introduced to the market, it is likely that its use would have been regulated sooner, thus avoiding the detrimental effects on marine gastropod populations and communities as documented over several decades.

Book chapter↗
USGS2003

Changes in wetland sediment elevation following major storms: implications for estimating trends in relative sea-level rise

Hurricanes can be important agents of geomorphic change in coastal marshes and mangrove forests. Hurricanes can cause large-scale redistribution of sediments within the coastal environment resulting in sedimentation, erosion, disruption of vegetated substrates, or some combination of these processes in coastal wetlands. It has been proposed that such sediment pulsing events are important at maintaining wetland sediment elevations in sediment-poor settings with high rates of relative sea-level rise, such as the Mississippi River Delta. But do these pulsing events result in a net gain in sediment elevation even when substantial amounts of sediment are deposited? Clearly sediment erosion and scour would result in a loss of elevation. But will a substantial sediment deposit on poorly consolidated sediments always result in a net gain in elevation? If the wetland vegetation is killed by wind, tidal surge, or the introduction of saline water, will there be a collapse of sediment elevation in the absence of root production and ongoing decomposition of root matter? During the past decade several wetlands where my colleagues and I have monitored sedimentation and elevation change have been struck by one to several hurricanes. This paper describes the range of sediment elevation responses to hurricane strikes, the suggested mechanisms driving those responses, the implications for estimating long-term trends in relative sea-level rise, and future research needs for improving our understanding of the role that major storms play in wetland sediment elevation dynamics. For many wetlands the change in sediment elevation was directly proportional to the amount of sediment deposited by the storm. But surprisingly, there was a loss of elevation in some wetlands with substantial sediment deposits. In these wetlands, the impact of the storm was either direct (sedimentation and compaction) or indirect (vegetation death), and the effect on sediment elevation was either permanent or temporary. For example, 2 cm of sediment deposited by Hurricane Andrew on a healthy salt marsh in south Louisiana had a direct and positive effect on sediment elevation. But in a deteriorated salt marsh a 3 cm thick sediment deposit was associated with a permanent loss in elevation (we have monitored this site for 10 years). The apparent mechanism driving elevation loss was compaction of the weakened substrate by the weight of the sediment deposit, the storm surge waters, or both. Clearly, storm-related sediment pulses are not going to save this marsh from becoming submerged by rising sea level. A temporary loss in elevation, as much as 2 cm, was observed in a North Carolina salt marsh with a highly organic substrate after each of 3 successive hurricanes even when sediment was deposited. The loss in elevation was apparently related to degassing of the chronically flooded substrate while the rebound in elevation was apparently related to a temporary drawdown of marsh water levels. Interestingly, sediment elevation increased after Hurricane Dennis in 1999, although the increase was less than the thickness of the sediment deposit. Further research is required to determine the mechanisms driving storm-related elevation change (i.e., compaction and expansion) in this marsh. There were two marshes where the gain in sediment elevation was greater than the thickness of the sediment deposit, but the effect was short-lived. In a high salt marsh in southern California, we hypothesize that the temporary spike in elevation was related to the flushing of salts from the hypersaline soils, which enhanced root growth that led to an increase in elevation. In a marsh with a highly organic substrate in north Florida, temporary increases in elevation (as much as 2 cm) greater than the thickness of the sediment deposit were apparently related to groundwater fluxes, which may have been influenced by enhanced runoff from storm rainfall. Lastly, Hurricane Mitch

Book chapter↗
USGS2016

Organizing environmental flow frameworks to meet hydropower mitigation needs

The global recognition of the importance of natural flow regimes to sustain the ecological integrity of river systems has led to increased societal pressure on the hydropower industry to change plant operations to improve downstream aquatic ecosystems. However, a complete reinstatement of natural flow regimes is often unrealistic when balancing water needs for ecosystems, energy production, and other human uses. Thus, stakeholders must identify a prioritized subset of flow prescriptions that meet ecological objectives in light of realistic constraints. Yet, isolating aspects of flow regimes to restore downstream of hydropower facilities is among the greatest challenges of environmental flow science due, in part, to the sheer volume of available environmental flow tools in conjunction with complex negotiation-based regulatory procedures. Herein, we propose an organizational framework that structures information and existing flow paradigms into a staged process that assists stakeholders in implementing environmental flows for hydropower facilities. The framework identifies areas where regulations fall short of the needed scientific process, and provide suggestions for stakeholders to ameliorate those situations through advanced preparation. We highlight the strengths of existing flow paradigms in their application to hydropower settings and suggest when and where tools are most applicable. Our suggested framework increases the effectiveness and efficiency of the e-flow implementation process by rapidly establishing a knowledge base and decreasing uncertainty so more time can be devoted to filling knowledge gaps. Lastly, the framework provides the structure for a coordinated research agenda to further the science of environmental flows related to hydropower environments.

Environmental Management↗
USGS2021

Pesticides in US Rivers: Regional differences in use, occurrence, and environmental toxicity, 2013 to 2017

Pesticides pose a threat to the environment, but because of the substantial number of compounds, a comprehensive assessment of pesticides and an evaluation of the risk that they pose to human and aquatic life is challenging. In this study, improved analytical methods were used to quantify 221 pesticide concentrations in surface waters over the time period from 2013 to 2017. Samples were collected from 74 river sites in the conterminous US (CONUS). Potential toxicity was assessed by comparing surface water pesticide concentrations to standard concentrations that are considered to have adverse effects on human health or aquatic organisms. The majority of pesticide use is related to agriculture, and agricultural production varies across the CONUS. Therefore, our results were summarized by region (Northeast, South, Midwest, West and Pacific), with the expectation that crop production differences would drive variability in pesticide use, detection frequency, and benchmark exceedance patterns. Although agricultural pesticide use was at least 2.5 times higher in the Midwest (49 kg km −2 ) than in any of the other four regions (Northeast, South, West, and Pacific, 3 to 21 kg km −2 ) and the average number of pesticides detected in the Midwest was at least 1.5 higher ( n = 25) than the other four regions ( n = 8 to n = 16), the potential toxicity results were more evenly distributed. At least 50% of the sites within each of the 5 regions had at least 1 chronic benchmark exceedance. Imidacloprid posed the greatest potential threat to aquatic life with a total of 245 benchmark exceedances at 60 of the 74 sites. These results show that pesticides persist in the environment beyond the site of application and expected period of use. Continued monitoring and research are needed to improve our understanding of pesticide effects on aquatic and human life.

Science of the Total Environment↗
USGS2006

Results of analyses of the fungicide Chlorothalonil, its degradation products, and other selected pesticides at 22 surface-water sites in five Southern states, 2003-04

In accordance with the mission of the U.S. Geological Survey (USGS) Toxic Substances Hydrology Program, a pesticide study was conducted during 2003–04 to determine the occurrence of the fungicide chlorothalonil and its degradation products at 22 surface-water sites in five Southern States. Water-quality samples were collected during the peanut-growing season (June–September) in 2003. During the peanut-growing season in 2004, samples were collected after large storms. An analytical method was developed at the USGS Organic Geochemistry Research Laboratory in Lawrence, Kansas, to measure chlorothalonil and its degradation products by liquid chromatography/mass spectrometry (LC/MS). Chlorothalonil was detected in 4 of the 113 surface-water samples. The primary degradation product of chlorothalonil, 4-hydroxy-chlorothalonil, was detected in 26 of the 113 samples with concentrations ranging from 0.002 to 0.930 microgram per liter. The chlorothalonil degradation products, 1-amide-4-hydroxy-chorothalonil and 1,3-diamide-chlorothalonil, were detected in one water sample each at 0.020 and 0.161 microgram per liter, respectively. The USGS Methods and Research Development Group, Lakewood, Colorado, developed a custom method for chlorothalonil using gas chromatography/mass spectrometry (GC/MS) in an effort to achieve a lower laboratory reporting level (LRL) than the USGS National Water-Quality Laboratory (NWQL) schedule 2060, which analyzes the compound chlorothalonil at a LRL of 0.035 µg/L. The group succeeded in achieving a lower GC/MS reporting level of 0.01 µg/L. Chlorothalonil was detected in 5 of 68 water samples analyzed using the custom GC/MS method, whereas chlorothalonil was detected in 2 of 21 water samples analyzed using NWQL schedule 2060. In addition to analysis of chlorothalonil and its degradation products, samples were analyzed using the USGS NWQL schedules 2001 and 2060 for about 114 pesticides and their degradation products. Samples also were analyzed for dissolved organic carbon, suspended sediment, and percentage of silt- and clay-sized particles. Overall, it was found that chlorothalonil was detected only infrequently and at relatively low concentrations. Chlorothalonil’s major degradation product, 4-hydroxy-chlorothalonil, was detected most frequently, occurred generally at higher concentrations in water samples than did the parent fungicide, and the data from this study reaffirmed that it is the dominant degradation product of chlorothalonil in the peanut-growing environment.

Open-File Report↗
USGS2020

Nontuberculous mycobacterial disease and molybdenum in Colorado watersheds

Nontuberculous mycobacteria (NTM) are environmental bacteria that may cause chronic lung disease. Environmental factors that favor NTM growth likely increase the risk of NTM exposure within specific environments. We aimed to identify water-quality constituents (Al, As, Cd, Ca, Cu, Fe, Pb, Mg, Mn, Mo, Ni, K, Se, Na, Zn, and pH) associated with NTM disease across Colorado watersheds. We conducted a geospatial, ecological study, associating data from patients with NTM disease treated at National Jewish Health and water-quality data from the Water Quality Portal. Water-quality constituents associated with disease risk were identified using generalized linear models with Poisson-distributed discrete responses. We observed a highly robust association between molybdenum (Mo) in the source water and disease risk. For every 1- unit increase in the log concentration of molybdenum in the source water, disease risk increased by 17.0%. We also observed a statistically significant association between calcium (Ca) in the source water and disease risk. The risk of NTM varied by watershed and was associated with watershed-specific water-quality constituents. These findings may inform mitigation strategies to decrease the overall risk of exposure.

Colorado↗
USGS2008

U.S. Geological Survey Karst Interest Group Proceedings, Bowling Green, Kentucky, May 27-29, 2008

*INTRODUCTION AND ACKNOWLEDGMENTS* Karst aquifer systems are present throughout parts of the United States and some of its territories. The complex depositional environments that form carbonate rocks combined with post-depositional tectonic events and the diverse climatic regimes under which these rocks were formed result in unique hydrologic systems. The dissolution of calcium carbonate and the subsequent development of distinct and beautiful landscapes, caverns, and springs have resulted in some karst areas of the United States being designated as national or state parks and commercial caverns. Karst aquifers and landscapes that form in tropical areas, such as the north coast of Puerto Rico, differ greatly from karst areas in more arid climates, such as central Texas or western South Dakota. Many of these public and private lands contain unique flora and fauna associated with the hydrologic systems in these karst areas. As a result, multiple Federal, State, and local agencies have an interest in the study of karst terrains. Carbonate sediments and rocks (limestone and dolomite) are composed of greater than 50 percent carbonate minerals and the predominant carbonate mineral is calcium carbonate or limestone (CaCO3). Unlike terrigenous clastic sedimentation, the depositional processes that produce carbonate rocks are complex, involving both biological and physical processes. These depositional processes impact greatly the development of permeability of the sediments. Carbonate minerals readily dissolve or precipitate depending on the chemistry of the water flowing through the rock, thus the study of both marine and meteoric diagenesis of carbonate sediments is multidisciplinary. Even with a better understanding of the depositional environment and subsequent diagenesis, the dual porosity nature of karst aquifers presents challenges to scientists attempting to study ground-water flow and contaminant transport. Many of the major springs and aquifers in the United States are developed in carbonate rocks and karst areas. These aquifers and the springs that discharge from them, serve as major water-supply sources and as unique biological habitats. Commonly, there is competition for the water resources of karst aquifers, and urban development in karst areas can impact the ecosystem and water quality of these aquifers. The concept for developing a Karst Interest Group evolved from the November 1999 National Ground-Water Meeting of the U.S. Geological Survey (USGS), Water Resources Division. As a result, the Karst Interest Group was formed in 2000. The Karst Interest Group is a loose-knit grass-roots organization of USGS employees devoted to fostering better communication among scientists working on, or interested in, karst hydrology studies. The mission of the Karst Interest Group is to encourage and support interdisciplinary collaboration and technology transfer among USGS scientists working in karst areas. Additionally, the Karst Interest Group encourages cooperative studies between the different disciplines of the USGS and other Department of Interior agencies and university researchers or research institutes. The first Karst Interest Group workshop was held in St. Petersburg, Florida, February 13-16, 2001, in the vicinity of karst features of the Floridan aquifer system. The proceedings of that first meeting, Water-Resources Investigations Report 01-4011 are available online at: http://water.usgs.gov/ogw/karst/ The second Karst Interest Group workshop was held August 20-22, 2002, in Shepherdstown, West Virginia, in close proximity to the carbonate aquifers of the northern Shenandoah Valley. The proceedings of the second workshop were published in Water-Resources Investigations Report 02-4174, which is available online at the previously mentioned website. The third workshop of the Karst Interest Group was held September, 12-15, 2005, in Rapid City, South Dakota, which is in close proximity to karst features

Scientific Investigations Report↗
USGS2001

Critical habitat for ovigerous Dungeness crabs

The Dungeness crab, Cancer magister , supports an important fishery in the northeastern Pacific Ocean, yet there is limited knowledge of ovigerous female brooding locations and brooding behavior. Our earlier research suggests that ovigerous crabs aggregate at the same brooding locations for many years. Within these locations, ovigerous females occur in high densities, with the majority of the aggregation buried within the sediment. These locations often have similar water depths and sediment types and appear to be critical for this life history stage. Our study was designed to examine the bathymetric distribution of Dungeness crabs in bays with and without sea otters at eight locations within the Glacier Bay area by conducting transects with a video-equipped manned submersible. Two of the bays investigated contained large aggregations of ovigerous females. At both sites the substrate was composed primarily of sand. However, only a small percentage of the 33 km of transects were classified as sand. These data suggest that sand substrate may be a limiting resource. Since crab brooding aggregations represent a large portion of the crab population within a small area, and because they are a critical component of Dungeness life history, areas with these characteristics need to be investigated, mapped, and protected from development or exploitation. The areas requiring protection from the impact of anthropogenic wastes, fishing, and logging activities could be quite small, thus limiting conflict with alternative users.

Conference Paper↗
USGS1997

Ecotoxicology of aluminum to fish and wildlife

The toxicity of aluminum has been studied extensively in fish, less so in invertebrates, amphibians, and birds, and not at all in reptiles and free-ranging mammals. For aquatic organisms, Al bioavailability and toxicity are intimately related to ambient pH; changes in ambient acidity may affect Al solubility, dissolved Al speciation, and organism sensitivity to Al. At moderate acidity (pH 5.5 to 7.0), fish and invertebrates may be stressed due to Al adsorption onto gill surfaces and subsequent asphyxiation. At pH 4.5 to 5.5, Al can impair ion regulation and augment the toxicity of H+. At lower pH, elevated Al can temporarily ameliorate the toxic effects of acidity by competing for binding sites with H+. Aluminum toxicity in aquatic environments is further affected by the concentration of ligands such as dissolved organic matter, fluoride, or sulfate, and of other cations such as Ca and Mg which compete for cellular binding sites. Although risk of Al toxicity is often based on a model of free-ion (Al3+) activity, recent evidence suggests that factors determining Al toxicity may be more complex. In general, aquatic invertebrates are less sensitive to Al toxicity and acidity than fish; thus acidified, Al-rich waters may actually reduce predation pressure. Fish may be affected by asphyxiation at moderate acidic conditions or electrolyte imbalances at lower pH. In amphibians, embryos and young larvae are typically more sensitive than older larvae. Early breeding amphibians, which lay eggs in ephemeral ponds and streams subject to spring runoff, are most at risk from Al and acidification; those that breed later in the year in lakes or rivers are least vulnerable. Birds and mammals are most likely exposed through dietary ingestion of soil or Al-contaminated foods. Concentrations > 1000 mg.kg-1 in food may be toxic to young birds and mammals. Clinical signs in these animals are consistent with rickets because Al precipitates with P in the gut. Suggestions for additional research on the ecotoxicology of Al to wild animals are provided.

Book chapter↗
USGS2010

The role of groundwater transport in aquatic mercury cycling

Mercury, which is transported globally by atmospheric pathways to remote aquatic environments, is a ubiquitous contaminant at very low (nanograms Hg per liter) aqueous concentrations. Until recently, however, analytical and sampling techniques were not available for freshwater systems to quantify the actual levels of mercury concentrations without introducing significant contamination artifacts. Four different sampling strategies were used to evaluate ground water flow as a mercury source and transport mechanism within aquatic systems. The sampling strategies employ ultraclean techniques to determine mercury concentrations in groundwater and pore water near Pallette Lake, Wisconsin. Ambient groundwater concentrations are about 2–4 ng Hg L −1 , whereas pore waters near the sediment/water interface average about 12 ng Hg L −1 , emphasizing the importance of biogeochemical processes near the interface. Overall, the groundwater system removes about twice as much mercury (1.5 g yr −1 ) as it contributes (0.7 g yr −1 ) to Pallette Lake. About three fourths of the groundwater mercury load is recycled, thought to be derived from the water column.

Wisconsin↗
USGS2010

Effects of lead on Na+, K+-ATPase and hemolymph ion concentrations in the freshwater mussel Elliptio complanata

Freshwater mussels are an imperiled fauna exposed to a variety of environmental toxicants such as lead (Pb) and studies are urgently needed to assess their health and condition to guide conservation efforts. A 28-day laboratory toxicity test with Pb and adult Eastern elliptio mussels (Elliptio complanata) was conducted to determine uptake kinetics and to assess the toxicological effects of Pb exposure. Test mussels were collected from a relatively uncontaminated reference site and exposed to a water-only control and five concentrations of Pb (as lead nitrate) ranging from 1 to 245 mu g/L in a static renewal test with a water hardness of 42 mg/L. Endpoints included tissue Pb concentrations, hemolymph Pb and ion (Na+, K+, Cl-, Ca2+) concentrations, and Na+, K+-ATPase enzyme activity in gill tissue. Mussels accumulated Pb rapidly, with tissue concentrations increasing at an exposure-dependent rate for the first 2 weeks, but with no significant increase from 2 to 4 weeks. Mussel tissue Pb concentrations ranged from 0.34 to 898 mu g/g dry weight, were strongly related to Pb in test water at every time interval (7, 14, 21, and 28 days), and did not significantly increase after day 14. Hemolymph Pb concentration was variable, dependent on exposure concentration, and showed no appreciable change with time beyond day 7, except for mussels in the greatest exposure concentration (245 mu g/L), which showed a significant reduction in Pb by 28 days, suggesting a threshold for Pb binding or elimination in hemolymph at concentrations near 1000 mu g/g. The Na+, K+-ATPase activity in the gill tissue of mussels was significantly reduced by Pb on day 28 and was highly correlated with tissue Pb concentration (R2 = 0.92; P = 0.013). The Na+, K+-ATPase activity was correlated with reduced hemolymph Na+ concentration at the greatest Pb exposure when enzyme activity was at 30% of controls. Hemolymph Ca2+ concentration increased significantly in mussels from the greatest Pb exposure and may be due to remobilization from the shell in an attempt to buffer the hemolymph against Pb uptake and toxicity. We conclude that Na+, K+-ATPase activity in mussels was adversely affected by Pb exposure, however, because the effects on activity were variable at the lower test concentrations, additional research is warranted over this range of exposures. (C) 2010 Wiley Periodicals, Inc. Environ Toxicol, 2012.

North Carolina↗