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Immunity to fish rhabdoviruses

Members of the family Rhabdoviridae are single-stranded RNA viruses and globally important pathogens of wild and cultured fish and thus relatively well studied in their respective hosts or other model systems. Here, we review the protective immune mechanisms that fish mount in response to rhabdovirus infections. Teleost fish possess the principal components of innate and adaptive immunity found in other vertebrates. Neutralizing antibodies are critical for long-term protection from fish rhabdoviruses, but several studies also indicate a role for cell-mediated immunity. Survival of acute rhabdoviral infection is also dependent on innate immunity, particularly the interferon (IFN) system that is rapidly induced in response to infection. Paradoxically, rhabdoviruses are sensitive to the effects of IFN but virulent rhabdoviruses can continue to replicate owing to the abilities of the matrix (M) protein to mediate host-cell shutoff and the non-virion (NV) protein to subvert programmed cell death and suppress functional IFN. While many basic features of the fish immune response to rhabdovirus infections are becoming better understood, much less is known about how factors in the environment affect the ecology of rhabdovirus infections in natural populations of aquatic animals.

Viruses↗

Genotype, soil type, and locale effects on reciprocal transplant vigor, endophyte growth, and microbial functional diversity of a narrow sagebrush hybrid zone in Salt Creek Canyon, Utah

When addressing the nature of ecological adaptation and environmental factors limiting population ranges and contributing to speciation, it is important to consider not only the plant's genotype and its response to the environment, but also any close interactions that it has with other organisms, specifically, symbiotic microorganisms. To investigate this, soils and seedlings were reciprocally transplanted into common gardens of the big sagebrush hybrid zone in Salt Creek Canyon, Utah, to determine location and edaphic effects on the fitness of parental and hybrid plants. Endophytic symbionts and functional microbial diversity of indigenous and transplanted soils and sagebrush plants were also examined. Strong selection occurred against the parental genotypes in the middle hybrid zone garden in middle hybrid zone soil; F1 hybrids had the highest fitness under these conditions. Neither of the parental genotypes had superior fitness in their indigenous soils and habitats; rather F1 hybrids with the nonindigenous maternal parent were superiorly fit. Significant garden-by-soil type interactions indicate adaptation of both plant and soil microorganisms to their indigenous soils and habitats, most notably in the middle hybrid zone garden in middle hybrid zone soil. Contrasting performances of F1 hybrids suggest asymmetrical gene flow with mountain, rather than basin, big sagebrush acting as the maternal parent. We showed that the microbial community impacted the performance of parental and hybrid plants in different soils, likely limiting the ranges of the different genotypes.

Utah↗

Science summary in support of Manatee Protection Area (MPA) design in Puerto Rico

The Antillean manatee (Trichechus manatus manatus), a subspecies of the West Indian manatee, is listed as endangered by the US Department of Interior. In accordance with its listing, the U.S. Fish and Wildlife Service’s Caribbean Field Office (USFWS) is mandated to create one or more Manatee Protection Areas (MPAs) for Puerto Rico. Designation of these areas must comply with the legal definition of an MPA’s purpose: to prevent or reduce take of manatees (CFR 50: 44 FR 60964, Oct. 22, 1979). To meet this goal, we pursued two objectives: 1) identify areas which include the specific ecological attributes necessary to support manatee populations, and 2) identify areas where take can be reduced through approved MPA regulatory frameworks. We achieved these objectives through literature review, expert elicitation, and geospatial modeling. This report delivers to USFWS a set of nine potential MPA regions. These regions represent the spatial realization of experts’ hypotheses regarding manatee requirements and threats, and the potential to implement MPA strategies (e.g. watercraft access, speed regulations, signage and boater education). The nine regions are compared based on a number of factors, including their potential to reduce take, quality of the habitat encompassed, and total area. These maps and statistics serve as suitable starting points to select one or more MPA sites, but we recommend that the mapped attributes and threats (i.e., boating activity) of MPAs be ground-truthed to visually confirm the local presence of resources, threats, and manatees before any area is selected. Once established, the effectiveness of MPAs can be monitored and updated through processes of adaptive monitoring and management. Aerial surveys, radio tracking studies, and public surveys are all valuable tools to assess the success of an MPA. Establishing MPAs is a management action that, integrated within the species Recovery Plan, should enhance the conservation of manatees.

Cooperator Science Series↗

Natal contributions of Kokanee salmon to Flaming Gorge Reservoir, Wyoming–Utah: An evaluation using otolith microchemistry

In a system that uses supplemental stocking to enhance a fishery that serves a dual purpose, an understanding of the contributions from natural and hatchery-produced fish is important so that hatchery resources can be appropriately allocated. Kokanee Oncorhynchus nerka were first stocked in Flaming Gorge Reservoir (FGR), Wyoming–Utah, in 1963 and serve a dual purpose as a prey resource and sport fish. Although natural recruitment occurs in the reservoir, a supplemental stocking program was initiated in 1991. We sought to identify the natal origin (i.e., natural, hatchery) of kokanee in FGR using otolith microchemistry. We evaluated return to the creel, composition of spawning aggregates, and growth of kokanee in FGR and focused on differences associated with natal origin. We analyzed kokanee otoliths that we collected from hatcheries ( n = 60) and FGR ( n = 1,003) for the strontium isotope ratio, 87 Sr/ 86 Sr, using laser ablation and a multicollector inductively coupled plasma mass spectrometer. We conducted Kruskal–Wallis tests to compare the strontium isotope ratios from the otolith edge of kokanee that we sampled from hatcheries and FGR. Based on 87 Sr/ 86 Sr ratios, we could distinguish natural-origin kokanee from 11 of the 12 hatcheries ( P < 0.01); however, the Wigwam Hatchery was not significantly different from FGR ( P = 0.84). We used model-based discriminant function analysis to assign natal origins for kokanee caught in FGR. Hatchery contribution to the population at large varied from 21 to 50% among year classes from 2014 to 2018. The percentage of hatchery origin kokanee in the creel (18–50%) was similar to what we observed in the population. Hatchery-produced kokanee contributed a higher proportion to tributary-spawning aggregates (40–90%) than shoreline-spawning aggregates (19–58%) by sample year. Growth of natural and hatchery kokanee was similar, suggesting similar performance in the system. Results from this study identify that hatchery supplementation contributes to the population and recreational harvest of kokanee in FGR. This research also provides insight into the ecology of kokanee that is useful for better understanding kokanee population dynamics in reservoir systems.

Utah, Wyoming↗

Endangered species management and ecosystem restoration: Finding the common ground

Management actions to protect endangered species and conserve ecosystem function may not always be in precise alignment. Efforts to recover the California Ridgway&rsquo;s Rail ( Rallus obsoletus obsoletus ; hereafter, California rail), a federally and state-listed species, and restoration of tidal marsh ecosystems in the San Francisco Bay estuary provide a prime example of habitat restoration that has conflicted with species conservation. On the brink of extinction from habitat loss and degradation, and non-native predators in the 1990s, California rail populations responded positively to introduction of a non-native plant, Atlantic cordgrass ( Spartina alterniflora ). California rail populations were in substantial decline when the non-native Spartina was initially introduced as part of efforts to recover tidal marshes. Subsequent hybridization with the native Pacific cordgrass ( Spartina foliosa ) boosted California rail populations by providing greater cover and increased habitat area. The hybrid cordgrass ( S. alterniflora &times; S. foliosa ) readily invaded tidal mudflats and channels, and both crowded out native tidal marsh plants and increased sediment accretion in the marsh plain. This resulted in modification of tidal marsh geomorphology, hydrology, productivity, and species composition. Our results show that denser California rail populations occur in invasive Spartina than in native Spartina in San Francisco Bay. Herbicide treatment between 2005 and 2012 removed invasive Spartina from open intertidal mud and preserved foraging habitat for shorebirds. However, removal of invasive Spartina caused substantial decreases in California rail populations. Unknown facets of California rail ecology, undesirable interim stages of tidal marsh restoration, and competing management objectives among stakeholders resulted in management planning for endangered species or ecosystem restoration that favored one goal over the other. We have examined this perceived conflict and propose strategies for moderating harmful effects of restoration while meeting the needs of both endangered species and the imperiled native marsh ecosystem.

California↗

Avian cholera mortality in lesser snow geese nesting on Banks Island, Northwest Territories

Avian cholera is one of the most important diseases affecting waterfowl in North America, but little is known about its ecology and its impact on waterfowl populations. We documented avian cholera mortality in breeding lesser snow geese (Chen c. caerulescens) at the Egg River colony on Banks Island, Northwest Territories, Canada, in 1995 and 1996. Area of the breeding colony, core nesting area, and number of nesting geese were greater in 1996 (colony=7,537 ha, core area=1,581 ha, 401,000 nesting geese) than in 1995 (colony=6,637 ha, core area=996 ha, 318,000 nesting geese). Density of nesting geese also was greater in the core area during 1995 (120 geese/ha) than in 1996 (90 geese/ha). Pasteurella multocida (serotype 1) was cultured from the leg bones of adult snow goose carcasses collected after outbreaks. Mortality from avian cholera began during nesting and continued until birds dispersed at hatch. Mortality appeared to be in foci scattered throughout the nesting colony, but generally was greater where there were greater densities of nesting geese. We estimated that 30,000 and 20,000 geese died in 1995 and 1996, respectively, about 5-9% of the nesting colony. Between 1991 and 1997, at least 4 avian cholera outbreaks occurred at Banks Island. It appears that avian cholera has become endemic in this population of snow geese, and these birds have the potential to transmit the disease to other waterfowl, especially on wintering areas where waterfowl are very concentrated.

Northwest Terrritories↗

The effects of harvest on waterfowl populations

Change in the size of populations over space and time is, arguably, the motivation for much of pure and applied ecological research. The fundamental model for the dynamics of any population is straightforward: the net change in the abundance is the simple difference between the number of individuals entering the population and the number leaving the population, either or both of which may change in response to factors intrinsic and extrinsic to the population. While harvest of individuals from a population constitutes a clear extrinsic source of removal of individuals, the response of populations to harvest is frequently complex, reflecting an interaction of harvest with one or more population processes. Here we consider the role of these interactions, and factors influencing them, on the effective harvest management of waterfowl populations. We review historical ideas concerning harvest and discuss the relationship(s) between waterfowl life histories and the development and application of population models to inform harvest management. The influence of population structure (age, spatial) on derivation of optimal harvest strategies (with and without explicit consideration of various sources of uncertainty) is considered. In addition to population structure, we discuss how the optimal harvest strategy may be influenced by: 1) patterns of density-dependence in one or more vital rates, and 2) heterogeneity in vital rates among individuals within an age-sex-size class. Although derivation of the optimal harvest strategy for simple population models (with or without structure) is generally straightforward, there are several potential difficulties in application. In particular, uncertainty concerning the population structure at the time of harvest, and the ability to regulate the structure of the harvest itself, are significant complications. We therefore review the evidence of effects of harvest on waterfowl populations. Some of this evidence has focussed on correspondence of data with more phenomenological models and other evidence relates to specific mechanisms, including densitydependence and heterogeneity. An important part of this evidence is found in the evolution of model weights under various adaptive harvest management programmes of the U.S. Fish and Wildlife Service for North American waterfowl. Overall, there is substantial uncertainty about system dynamics, about the impacts of potential management and conservation decisions on those dynamics, and how to optimise management decisions in the presence of such uncertainties. Such relationships are unlikely to be stationary over space or time, and selective harvest of some individuals can potentially alter life history allocation of resources over time &ndash; both of which will potentially influence optimal harvest strategies. These sources of variation and uncertainty argue for the use of adaptive approaches to waterfowl harvest management.

Wildfowl↗

House bat management

The soundest long-term solution for the management of bats that enter buildings and cause a nuisance problem or present a public health hazard is by batproofing the structure. Chemical toxicants do not solve house bat problems and may create worse ones. This manual describes batproofing techniques that will provide effective and acceptable alternatives for dealing with house bat problems and hazards. Recent declines in bat populations and greater appreciation of the ecological importance of bats have identified the need for sound management strategies that will encourage bat conservation while protecting human health and solving nuisance problems. One of the best deterrents against house bats is to improve the energy efficiency of the structure since bats may enter holes through which heat is lost. Heat conservation methods used for batproofing will also be eligible for Federal residential energy tax credits. The manual should be useful to homeowners, public health officials, physicians, veterinarians, conservationists, and others interested or concerned about bat interactions with humans.

Resource Publication↗

Combining band recovery data and Pollock's robust design to model temporary and permanent emigration

Capture-recapture models are widely used to estimate demographic parameters of marked populations. Recently, this statistical theory has been extended to modeling dispersal of open populations. Multistate models can be used to estimate movement probabilities among subdivided populations if multiple sites are sampled. Frequently, however, sampling is limited to a single site, Models described by Burnham (1993, in Marked Individuals in the Study of Bird Populations , 199–213), which combined open population capture-recapture and band-recovery models, can be used to estimate permanent emigration when sampling is limited to a single population. Similarly, Kendall, Nichols, and Hines (1997, Ecology 51 , 563–578) developed models to estimate temporary emigration under Pollock's (1982, Journal of Wildlife Management 46 , 757–760) robust design. We describe a likelihood-based approach to simultaneously estimate temporary and permanent emigration when sampling is limited to a single population. We use a sampling design that combines the robust design and recoveries of individuals obtained immediately following each sampling period. We present a general form for our model where temporary emigration is a first-order Markov process, and we discuss more restrictive models. We illustrate these models with analysis of data on marked Canvasback ducks. Our analysis indicates that probability of permanent emigration for adult female Canvasbacks was 0.193 ( ) and that birds that were present at the study area in year i — 1 had a higher probability of presence in year i than birds that were not present in year i — 1.

Biometrics↗

Effective number of breeding adults in Bufo bufo estimated from age-specific variation at minisatellite loci

Estimates of the effective number of breeding adults were derived for three semi-isolated populations of the common toad Bufo bufo based on temporal (i.e. adult-progeny) variance in allele frequency for three highly polymorphic minisatellite loci. Estimates of spatial variance in allele frequency among populations and of age-specific measures of genetic variability are also described. Each population was characterized by a low effective adult breeding number ( N b ) based on a large age-specific variance in mini-satellite allele frequency. Estimates of N b (range 21–46 for population means across three loci) were ≊ 55–230-fold lower than estimates of total adult census size. The implications of low effective breeding numbers for long-term maintenance of genetic variability and population viability are discussed relative to the species' reproductive ecology, current land-use practices, and present and historical habitat modification and loss. The utility of indirect measures of population parameters such as N b and N e based on time-series data of minisatellite allele frequencies is discussed relative to similar measures estimated from commonly used genetic markers such as protein allozymes.

Leicestershire region↗

Demographic stochasticity in small remnant populations of the declining distylous plant Primula veris

We studied ecological consequences of distyly for the declining perennial plant Primula veris in the Swiss Jura. Distyly favours cross-fertilization and avoids inbreeding, but may lead to pollen limitation and reduced reproduction if morph frequencies deviate from 50 %. Disassortative mating is promoted by the reciprocal position of stigmas and anthers in the two morphs (pin and thrum) and by intramorph incompatibility and should result in equal frequencies of morphs at equilibrium. However, deviations could arise because of demographic stochasticity, the lower intra-morph incompatibility of the pin morph, and niche differentiation between morphs. Demographic stochasticity should result in symmetric deviations from an even morph frequency among populations and in increased deviations with decreasing population size. If crosses between pins occurred, these would only generate pins, and this could result in a pin-bias of morph frequencies in general and in small populations in particular. If the morphs have different niches, morph frequencies should be related to environmental factors, morphs might be spatially segregated, and morphological differences between morphs would be expected. We tested these hypotheses in the declining distylous P. veris. We studied morph frequencies in relation to environmental conditions and population size, spatial segregation in field populations, morphological differences between morphs, and growth responses to nutrient addition. Morph frequencies in 76 populations with 1 - 80000 flowering plants fluctuated symmetrically about 50 %. Deviations from 50 % were much larger in small populations, and sixof the smallest populations had lost one morph altogether. In contrast, morph frequencies were neither related to population size nor to 17 measures of environmental conditions. We found no spatial segregation or morphological differences in the field or in the common garden. The results suggest that demographic stochasticity caused deviations of the morph ratiofrom unity in small populations. Demographic stochasticity was probably caused by the random elimination of plants during the fragmentation of formerly large continuous populations. Biased morph frequencies may be one of the reasons for the strongly reduced reproduction in small populations of P. veris.

Basic and Applied Ecology↗

Red imported fire ant impacts on wildlife: A decade of research

The negative impacts of biological invasion are economically and ecologically significant and, while incompletely quantified, they are clearly substantial. Ants (family Formicidae) are an important, although often overlooked, component of many terrestrial ecosystems. Six species of ants are especially striking in their global ability to invade, and their impacts. This paper focuses on the impacts of the most destructive of those species, the red imported fire ant ( Solenopsis invicta ), and focuses on impacts on native vertebrates. Red imported fire ants often become the dominant ant species in infested areas outside of their native range due to their aggressive foraging behavior, high reproductive capability and lack of predators and/or other strong competitors. The evidence suggests that mammals, birds and herpetofauna are vulnerable to negative impacts from fire ants, and some species are more likely to experience negative population-level impacts than other species. Assessing the ecological impacts of fire ants on wild animal populations is logistically difficult, and very few studies have combined replicated experimental manipulation with adequate spatial (>10 ha) and temporal (>1 y) scale. Thus, most studies have been observational, opportunistic, small-scale or 'natural' experiments. However, significant research, including an increase in experimental and mechanistic investigations, has occurred during the past decade, and this has led to information that can lead to better management of potentially affected species.

American Midland Naturalist↗

Ecology and biology of paddlefish in North America: historical perspectives, management approaches, and research priorities

Paddlefish ( Polyodon spathula , Polyodontidae)are large, mostly-riverine fish that once were abundant in medium- to large-sized river systems throughout much of the central United States. Concern for paddlefish populations has grown from a regional fisheries issue to one of national importance for the United States. In 1989, the U.S. Fish and Wildlife Service (USFWS) was petitioned to list paddlefish as a federally threatened species under the Endangered Species Act. The petition was not granted, primarily because of a lack of empirical data on paddlefish population size, age structure, growth, or harvest rates across the present 22-state range. Nonetheless, concern for paddlefish populations prompted the USFWS to recommend that paddlefish be protected through the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES). The addition of paddlefish to Appendix II of CITES, which was approved in March 1992, provides a mechanism to curtail illegal trade in paddlefish and their parts and supports a variety of conservation plans. Paddlefish populations have been negatively affected by overharvest, river modifications, and pollution, but the paddlefish still occupies much of its historic range and most extant populations seem to be stable. Although many facets of paddlefish biology and ecology are well understood, the lack of information on larval and juvenile ecology, mechanisms that determine recruitment, population size and vital rates, interjurisdictional movements, and the effects of anthropogenic activities present significant obstacles for managing paddlefish populations. Questions about the size and structure of local populations, and how such populations are affected by navigation traffic, dams, and pollution are regarded as medium priority areas for future research. The availability of suitable spawning habitat and overall reproductive success in impounded rivers are unknown and represent critical areas for future research. Research on reproductive and recruitment success in impounded rivers have significant implications for managing paddlefish, as rivers are modified further for human use.

Reviews in Fish Biology and Fisheries↗

Ecological distribution and crude density of breeding birds on prairie wetlands

Breeding populations of 28 species of wetland-dwelling birds other than waterfowl (Anatidae) were censused on 1,321 wetlands lying within the prairie pothole region of North Dakota. Ecological distribution and two crude measures of relative density were calculated for the 22 commonest species using eight wetland classes. Semipermanent wetlands supported nearly two-thirds of the population and were used by all 22 species, whereas seasonal wetlands contained about one-third of the population and were used by 20 species Semipermanent, fen, and temporary wetlands contained highest bird densities on the basis of wetland area; on the basis of wetland unit, densities were highest on semipermanent, permanent, alkali, and fen wetlands. The highest ranking of semipermanent wetlands by all three measures of use was probably because these wetlands, as well as being relatively numerous and large, were vegetatively diverse. The fairly large proportion of the bird population supported by seasonal wetlands was a result of wetland abundance and moderate vegetative diversity. Increased vegetative diversity results from the development of characteristic zones of hydrophytes at sites where water persists longer during the growing season. Frequent cultivation of prairie wetlands results in the replacement of tall, robust perennials by bare soil or stands of short, weak-stemmed annuals that likely are unattractive to nesting birds.

North Dakota↗

Collaborative approaches to the evolution of migration and the development of science-based conservation in shorebirds

Shorebirds are among the most highly migratory creatures on earth. Both the study of their ecology and ongoing efforts to conserve their populations must reflect this central aspect of their biology. Many species of shorebirds use migration and staging sites scattered throughout the hemisphere to complete their annual migrations between breeding areas and nonbreeding habitats (Morrison 1984). The vast distances between habitats they use pose significant challenges for studying their migration ecology. At the same time, the large number of political boundaries shorebirds cross during their epic migrations create parallel challenges for organizations working on their management and conservation. Nebel et al. (2002) represent a collaborative effort to understand the conservation implications of Western Sandpiper ( Calidris mauri ) migration ecology on a scale worthy of this highly migratory species. The data sets involved in the analysis come from four U.S. states, two Canadian provinces, and a total of five nations. Only by collaborating on this historic scale were the authors able to assemble the information necessary to understand important aspects of the migration ecology of this species, and the implications for conservation of the patterns they discovered. Collaborative approaches to shorebird migration ecology developed slowly over several decades. The same period also saw the creation of large-scale efforts to monitor and conserve shorebirds. This overview first traces the history of the study of migration ecology of shorebirds during that fertile period, and then describes the monitoring and protection efforts that have been developed in an attempt to address the enormous issues of scale posed by shorebird migration ecology and conservation.

The Auk↗

Compact or sprawling cities: Has the sparing-sharing framework yielded an ecological verdict?

Purpose of Review Global urban land area is growing faster than the urban population, raising concerns that sprawling, low-density development will reduce biodiversity and human wellbeing. The sparing-sharing framework, adapted from agroecology, provides one approach to assessing alternative urban growth patterns. It compares ecological outcomes in landscapes matched for total population and land area, but differing in configuration: land sparing (partitioned between densely urbanized and undeveloped areas) or land sharing (low-density development throughout). We reviewed the urban sparing-sharing literature since 2010 and recovered 15 studies conducted in 22 cities on four continents. Recent Findings Collectively, studies assessed effects of alternative development patterns on 296 species, 21 community metrics (such as species richness), and 26 indicators of ecosystem services or processes (such as carbon sequestration). Sparing was the best option for 51% of individual species; 43% of community metrics; and 27% of ecosystem service indicators. Summary Existing ecological research does not clearly favor one pattern or the other, and new approaches are needed to facilitate decision making and ecological insight. Specifically, future work could (1) explicitly evaluate optimized urban development patterns across multiple competing priorities (such as providing housing, delivering ecosystem services, and protecting priority species), (2) tackle issues of spatial scale and connectivity that are often ambiguous in sparing-sharing research, and (3) improve geographical representation. These advances can be made while preserving the key insight of the framework–that choices between alternative landscape configurations are only meaningful when those landscapes are matched for total area and the level of human needs met.

Current Landscape Ecology Reports↗

Population dynamics of bowfin in a south Georgia reservoir: latitudinal comparisons of population structure, growth, and mortality

The objectives of this study were to evaluate the population dynamics of bowfin (Amia calva) in Lake Lindsay Grace, Georgia, and to compare those dynamics to other bowfin populations. Relative abundance of bowfin sampled in 2010 in Lake Lindsay Grace was low and variable (mean&plusmn;SD; 2.7&plusmn;4.7 fish per hour of electrofishing). Total length (TL) of bowfin collected in Lake Lindsay Grace varied from 233&ndash;683 mm. Age of bowfin in Lake Lindsay Grace varied from 0&ndash;5 yr. Total annual mortality (A) was estimated at 68%. Both sexes appeared to be fully mature by age 2 with gonadosomatic index values above 8 for females and close to 1 for males. The majority of females were older, longer, and heavier than males. Bowfin in Lake Lindsay Grace had fast growth up to age 4 and higher total annual mortality than the other populations examined in this study. A chi-square test indicated that size structure of bowfin from Lake Lindsay Grace was different than those of a Louisiana population and two bowfin populations from the upper Mississippi River. To further assess bowfin size structure, we proposed standard length (i.e., TL) categories: stock (200 mm, 8 inches), quality (350 mm, 14 inches), preferred (460 mm, 18 inches), memorable (560 mm, 22, inches), and trophy (710 mm, 28 inches). Because our knowledge of bowfin ecology is limited, additional understanding of bowfin population dynamics provides important insight that can be used in management of bowfin across their distribution.

Georgia↗

Please don't misuse the museum: 'declines' may be statistical

Detecting declines in populations at broad spatial scales takes enormous effort, and long-term data are often more sparse than is desired for estimating trends, identifying drivers for population changes, framing conservation decisions or taking management actions. Museum records and historic data can be available at large scales across multiple decades, and are therefore an attractive source of information on the comparative status of populations. However, changes in populations may be real (e.g., in response to environmental covariates) or resulting from variation in our ability to observe the true population response (also possibly related to environmental covariates). This is a (statistical) nuisance in understanding the true status of a population. Evaluating statistical hypotheses alongside more interesting ecological ones is important in the appropriate use of museum data. Two statistical considerations are generally applicable to use of museum records: first without initial random sampling, comparison with contemporary results cannot provide inference to the entire range of a species, and second the availability of only some individuals in a population may respond to environmental changes. Changes in the availability of individuals may reduce the proportion of the population that is present and able to be counted on a given survey event, resulting in an apparent decline even when population size is stable.

Global Change Biology↗