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At least 541 records · Page 30Linked to original sources
USGS1980

Preliminary field geotechnical and geophysical logs from a drill hole in the Capps coal field, Cook Inlet region, Alaska

The drilling and logging activity described in this report was undertaken in August 1979, as part of the Energy Lands program of the U.S. Geological Survey. The general objectives of the project, of which this work is a part, are to provide an understanding of the nature, location, and extent of the engineering and environmental concerns in potential coal-development areas of the Cook Inlet region, Alaska. The geotechnical and geophysical logs presented in this report provide some of the basic physical-property and engineering data needed to evaluate geologic hazards, and to predict the response of geologic materials to large-scale coal mining and related development in the Capps coal field of the Beluga coal area. Specifically, the information may be used to help determine such things as natural- and cut-slope stability, spoil-pile stability, ground response to seismic activity, blasting effects, excavatability, bulking characteristics, ground-water conditions, and erosion potential.

Alaska↗
USGS1980

A procedure for predicting concentrations of dissolved solids and sulfate ion in streams draining areas strip mined for coal

Current trends in increased coal production neccessitate the development of techniques to appraise the environmental degradation that results from strip mining. A procedure is introduced for the prediction of dissolved-solids and sulfate-ion concentrations in streams draining strip-mined areas as functions of the percentage of the drainage area that has been strip mined. These relationships are expressed by regression equations computed from data collected in streams draining strip-mined areas of Cherokee and Crawford Counties in southeast Kansas.

Kansas↗
USGS1985

Chemical and biological quality of selected lakes in Ohio, 1978 and 1979

Twenty-eight Ohio lakes were sampled by the U.S. Geological Survey and the Ohio Environmental Protection Agency for water-quality characteristics during the spring and summer of 1978 and 1979. This report is the third in a series covering a lake-sampling program that began in 1975. Data include water-column profiles of temperature, dissolved oxygen, pH, and specific conductance. Chemical, physical, and biological properties were measured at specific points in the water column, and selected physical and chemical properties also were measured in the principal inflows. The lakes were predominatly hard (120 180 milligrams per liter) to very hard water, although several soft-water lakes were found in southeastern Ohio. Calcium, bicarbonate, and sulfate were the principal dissolved constituents. Specific conductance ranged from 103 micromhos per centimeter (at 25 degrees Celsius) at Tycoon Lake, 1978, to 2,550 micromhos per centimeter at West Fork Mill Creek Lake, 1978. Thirteen lakes had trace-element concentrations that were above the limits for exceptional warm-water habitat recammended by the Ohio Environmental Protection Agency. Seasonal thermal gradients developed in most lakes deeper than 17 feet. Oxygen concentrations were zero or near zero during the summer sampling of the bottom water of all lakes having definite thermal gradients. Most anaerobic zones contained hydrogen sulfide and high concentrations of ammonia. All lakes were evaluated and classified by Carlson's trophic state index. Most of the lakes were classified as eutrophic. Blue-green algae (CyanophytaJ) dominated the summer algal communities. Fecal colifrom counts were within Ohio standards, although high (more than 1,000 colonies per 100 milliliters) fecal colifrom and fecal streptococcus counts were observed in West Fork Mill Creek Lake after significant runoff.

Open-File Report↗
USGS2004

Application of health-based screening levels to ground-water quality data in a state-scale pilot effort

A state-scale pilot effort was conducted to evaluate a Health-Based Screening Level (HBSL) approach developed for communicating findings from the U.S. Geological Survey (USGS) National Water-Quality Assessment Program in a human-health context. Many aquifers sampled by USGS are used as drinking-water sources, and water-quality conditions historically have been assessed by comparing measured contaminant concentrations to established drinking-water standards and guidelines. Because drinking-water standards and guidelines do not exist for many analyzed contaminants, HBSL values were developed collaboratively by the USGS, U.S. Environmental Protection Agency (USEPA), New Jersey Department of Environmental Protection, and Oregon Health & Science University, using USEPA toxicity values and USEPA Office of Water methodologies. The main objective of this report is to demonstrate the use of HBSL approach as a tool for communicating water-quality data in a human-health context by conducting a retrospective analysis of ground-water quality data from New Jersey. Another important objective is to provide guidance on the use and interpretation of HBSL values and other human-health benchmarks in the analyses of water-quality data in a human-health context. Ground-water samples collected during 1996-98 from 30 public-supply, 82 domestic, and 108 monitoring wells were analyzed for 97 pesticides and 85 volatile organic compounds (VOCs). The occurrence of individual pesticides and VOCs was evaluated in a human-health context by calculating Benchmark Quotients (BQs), defined as ratios of measured concentrations of regulated compounds (that is, compounds with Federal or state drinking-water standards) to Maximum Contaminant Level (MCL) values and ratios of measured concentrations of unregulated compounds to HBSL values. Contaminants were identified as being of potential human-health concern if maximum detected concentrations were within a factor of 10 of the associated MCL or HBSL (that is, maximum BQ value (BQmax) greater than or equal to 0.1) in any well type (public supply, domestic, monitoring). Most (57 of 77) pesticides and VOCs with human-health benchmarks were detected at concentrations well below these levels (BQmax less than 0.1) for all three well types; however, BQmax values ranged from 0.1 to 3,000 for 6 pesticides and 14 VOCs. Of these 20 contaminants, one pesticide (dieldrin) and three VOCs (1,2-dibromoethane, tetrachloroethylene, and trichloroethylene) both (1) were measured at concentrations that met or exceeded MCL or HBSL values, and (2) were detected in more than 10 percent of samples collected from raw ground water used as sources of drinking water (public-supply and (or) domestic wells) and, therefore, are particularly relevant to human health. The occurrence of multiple pesticides and VOCs in individual wells also was evaluated in a human-health context because at least 53 different contaminants were detected in each of the three well types. To assess the relative human-health importance of the occurrence of multiple contaminants in different wells, the BQ values for all contaminants in a given well were summed. The median ratio of the maximum BQ to the sum of all BQ values for each well ranged from 0.83 to 0.93 for all well types, indicating that the maximum BQ makes up the majority of the sum for most wells. Maximum and summed BQ values were statistically greater for individual public-supply wells than for individual domestic and monitoring wells. The HBSL approach is an effective tool for placing water-quality data in a human-health context. For 79 of the 182 compounds analyzed in this study, no USEPA drinking-water standards or guidelines exist, but new HBSL values were calculated for 39 of these 79 compounds. The new HBSL values increased the number of detected pesticides and VOCs with human-health benchmarks from 65 to 77 (of 97 detected compounds), thereby expanding the basis for interpreting contaminant-occu

Scientific Investigations Report↗
USGS2006

A computer program for estimating instream travel times and concentrations of a potential contaminant in the Yellowstone River, Montana

The Yellowstone River is very important in a variety of ways to the residents of southeastern Montana; however, it is especially vulnerable to spilled contaminants. In 2004, the U.S. Geological Survey, in cooperation with Montana Department of Environmental Quality, initiated a study to develop a computer program to rapidly estimate instream travel times and concentrations of a potential contaminant in the Yellowstone River using regression equations developed in 1999 by the U.S. Geological Survey. The purpose of this report is to describe these equations and their limitations, describe the development of a computer program to apply the equations to the Yellowstone River, and provide detailed instructions on how to use the program. This program is available online at [http://pubs.water.usgs.gov/sir2006-5057/includes/ytot.xls]. The regression equations provide estimates of instream travel times and concentrations in rivers where little or no contaminant-transport data are available. Equations were developed and presented for the most probable flow velocity and the maximum probable flow velocity. These velocity estimates can then be used to calculate instream travel times and concentrations of a potential contaminant. The computer program was developed so estimation equations for instream travel times and concentrations can be solved quickly for sites along the Yellowstone River between Corwin Springs and Sidney, Montana. The basic types of data needed to run the program are spill data, streamflow data, and data for locations of interest along the Yellowstone River. Data output from the program includes spill location, river mileage at specified locations, instantaneous discharge, mean-annual discharge, drainage area, and channel slope. Travel times and concentrations are provided for estimates of the most probable velocity of the peak concentration and the maximum probable velocity of the peak concentration. Verification of estimates of instream travel times and concentrations for the Yellowstone River requires information about the flow velocity throughout the 520 mi of river in the study area. Dye-tracer studies would provide the best data about flow velocities and would provide the best verification of instream travel times and concentrations estimated from this computer program; however, data from such studies does not currently (2006) exist and new studies would be expensive and time-consuming. An alternative approach used in this study for verification of instream travel times is based on the use of flood-wave velocities determined from recorded streamflow hydrographs at selected mainstem streamflow-gaging stations along the Yellowstone River. The ratios of flood-wave velocity to the most probable velocity for the base flow estimated from the computer program are within the accepted range of 2.5 to 4.0 and indicate that flow velocities estimated from the computer program are reasonable for the Yellowstone River. The ratios of flood-wave velocity to the maximum probable velocity are within a range of 1.9 to 2.8 and indicate that the maximum probable flow velocities estimated from the computer program, which corresponds to the shortest travel times and maximum probable concentrations, are conservative and reasonable for the Yellowstone River.

Scientific Investigations Report↗
USGS2008

Recovery of Ground-Water Levels from 1988 to 2003 and Analysis of Effects of 2003 and Full-Allocation Withdrawals in Critical Area 2, Southern New Jersey

Water levels in the Potomac-Raritan-Magothy aquifer system within Water Supply Critical Area 2 in the southern New Jersey Coastal Plain have recovered as a result of reductions in ground-water withdrawals initiated in the early 1990s. The Critical Area consists of the depleted zone and the threatened margin. The Potomac-Raritan-Magothy aquifer system consists of the Upper, Middle, and Lower aquifers. Generally, ground-water withdrawals from these aquifers declined 5 to 10 Mgal/d (million gallons per day) and water levels recovered 0 to 40 ft (foot) from 1988 to 2003. In order to reevaluate water-allocation restrictions in Critical Area 2 in response to changes in the ground-water-flow system and demands for additional water supply due to increased development, the New Jersey Department of Environmental Protection (NJDEP) needs information about the effects of changes in those allocations. Therefore, the U.S. Geological Survey (USGS), in cooperation with the NJDEP, used an existing ground-water-flow model of the New Jersey Coastal Plain to evaluate the effects of withdrawal alternatives on hydraulic heads in the Potomac-Raritan-Magothy aquifer system in Critical Area 2. The U.S. Geological Survey Regional Aquifer System Analysis model was used to simulate steady-state ground-water flow. Two withdrawal conditions were tested by using the model to evaluate hydraulic heads and differences in heads in these aquifers: 2003 withdrawals and full-allocation withdrawals (17.4 Mgal/d greater than 2003 withdrawals). Model results are presented using head maps and head-difference maps that compare 2003 to full-allocation withdrawals. Mandated hydrologic conditions for Critical Area protection are that the simulated -30-ft head contour not extend beyond the boundary of the depleted zone and (or) be at least 5 mi (miles) updip from the 250-mg/L (milligram per liter) isochlor in all three aquifers. Simulation results indicate that, for 2003 withdrawals, the simulated -30-ft head contour in all three aquifers is generally within the boundary of the depleted zone, except in the Lower aquifer in northern Camden and northwestern Burlington Counties, and is generally 1 to 10 mi downdip from the 250-mg/L isochlor. (Corresponding observed data indicate that the -30-ft water-level contour extends beyond the southwest boundary of the depleted zone in the Upper and Middle aquifers, and is generally 5 to 20 mi downdip from the 250-mg/L isochlor in all three aquifers.) The area in which heads are below -30 ft ranges from 389 mi2 (square miles) in the Middle aquifer to 427 mi2 in the Lower aquifer. For full-allocation withdrawals, the simulated -30-ft head contour extends beyond the boundary of the depleted zone in all three aquifers in northern Camden and northwestern Burlington Counties and in the Upper aquifer in Gloucester and Salem Counties, and is generally 5 to 15 mi downdip from the 250-mg/L isochlor. The area in which heads are below -30 ft ranges from 616 mi2 in the Upper aquifer to 813 mi2 in the Lower aquifer. These results and observed data indicate that any increase in withdrawals from 2003 values would likely cause heads in the three aquifers to decline below the minimum values mandated by the NJDEP for the Critical Area.

Scientific Investigations Report↗
USGS2010

Global mineral resource assessment

Introduction In response to the growing demand for information on the global mineral-resource base, the U.S. Geological Survey (USGS) is conducting the Quantitative Global Mineral Resource Assessment Project (GMRAP), a cooperative international project, begun in 2002, to assess the world's undiscovered nonfuel mineral resources. Primary Objectives The USGS conducts national and global assessments of resources (mineral, energy, water, biologic) to provide science in support of decisionmaking. Mineral resource assessments provide a synthesis of available information about where mineral deposits are known and suspected in the Earth’s crust, what commodities may be present, and estimates of amounts of resources that may be present in undiscovered deposits. The Global Mineral Resource Assessment Project started in 2002 as a cooperative international effort to assess the world’s undiscovered nonfuel mineral resources. Primary objectives are to: Outline the regional locations and estimate the probable amounts of the world’s undiscovered resources of copper, platinum-group elements (PGE), and potash in selected types of mineral deposits to depths of 1 to 3 kilometers below the Earth’s surface. Provide the first globally consistent and comprehensive analysis of undiscovered nonfuel mineral resources to provide all nations with a regional and global context for evaluating their mineral resources, planning for new mineral exploration and anticipating the economic, environmental, and social impacts of mineral development, and making land use decisions. The project emphasizes the most important types of mineral deposits for world supply of copper, platinum-group elements (PGE) and nickel, and potash. Go to the Quantitative Global Mineral-Resource Assessments home page for more information.

Scientific Investigations Report↗
USGS2015

Surface-water quality in agricultural watersheds of the North Carolina Coastal Plain associated with concentrated animal feeding operations

The effects of concentrated animal feeding operations (CAFOs) on water quality were investigated at 54 agricultural stream sites throughout the North Carolina Coastal Plain during 2012 and 2013. Three general watershed land-use types were examined during the study, including 18 background watersheds with no active CAFOs (BK sites), 18 watersheds with one or more active swine CAFOs but no poultry CAFOs (SW sites), and 18 watersheds with at least one active swine CAFO and one active dry-litter poultry CAFO (SP sites). The watershed drainage areas for these 54 stream sites ranged from 1.2 to 17.5 square miles. Conventional fertilizers used for crop production are the primary source of nutrients at the BK sites. Animal-waste manures represent an additional source of nutrients at the SW and SP study sites. Land cover, soil drainage, and CAFO attributes were compiled for each watershed. Water-quality field measurements were made and samples were collected at the 54 primary sites during 6 bimonthly sampling periods from June 2012 to April 2013. An additional 23 secondary sites were sampled once during April 2013 to provide supplemental data at stream locations directly adjacent or in close proximity to swine CAFOs and (or) background agricultural areas within 9 of the primary watersheds. The watershed drainage areas for the 23 secondary sites ranged from 0.2 to 8.9 square miles. Water temperature, specific conductance, dissolved-oxygen concentration, and pH were measured directly in the streams. Water samples were analyzed for major ions, nutrients, and stable isotopes, including delta hydrogen-2 (δ 2 H) and delta oxygen-18 (δ 18 O) of water and delta nitrogen-15 (δ 15 N) and δ 18 O of dissolved nitrate plus nitrite. Most of the water-quality properties and constituents varied significantly among the six sampling periods, changing both seasonally and in response to hydrologic conditions. The differences noted among the sampling periods indicate that the interactions between seasonal climatic differences, streamflow conditions, and instream biotic and abiotic processes are complex and their integrated effects can have varying degrees of influence on individual nutrients. Water-quality differences were noted for the SW and SP land-use groups relative to the BK group. Median values of specific conductance, several major ions (magnesium, sodium, potassium, and chloride), and nitrogen fractions (ammonia plus organic nitrogen, ammonia, nitrate plus nitrite, total nitrogen, and δ 15 N of nitrate plus nitrite) were higher for the SW and SP groups compared to the BK group. No significant differences in water temperature, dissolved oxygen, calcium, total organic nitrogen, orthophosphate, total phosphorus, or δ 18 O of nitrate plus nitrite were noted among the land-use groups. When compared on the basis of land-use type, there was an overall measurable effect of CAFO waste manures on stream water quality for the SW and SP watershed groups. Some individual sites within the SW and SP groups showed no measurable CAFO effects on water quality despite having CAFOs present upstream. An evaluation of sodium plus potassium concentrations coupled with δ 15 N values of nitrate plus nitrite proved valuable for distinguishing which SW and SP sites had a water-quality signature indicative of CAFO waste manures. Sites with CAFO manure effects were characterized by higher sodium plus potassium concentrations (commonly between 11 and 33 milligrams per liter) and δ 15 N values of nitrate plus nitrite (commonly between 11 and 26 parts per thousand) relative to sites reflecting background agricultural conditions, which commonly had sodium plus potassium concentrations between 6 and 14 milligrams per liter and δ 15 N values of nitrate plus nitrite between 6 and 15 parts per thousand. On the basis of the results of this study, land applications of waste manure at swine CAFOs influenced ion and nutrient chemistry in many of the North Carolina Coastal Plain streams that were studied. A classification tree model was developed to examine relations of watershed environmental attributes among the study sites with and without CAFO manure effects. Model results indicated that variations in swine barn density, percentage of wetlands, and total acres available for applying swine-waste manures had an important influence on those watersheds where CAFO effects on water quality were either evident or mitigated. Measurable effects of CAFO waste manures on stream water quality were most evident in those SW and SP watersheds having lower percentages of wetlands combined with higher swine barn densities and (or) higher total acres available for applying waste manure at the swine CAFOs. Stream water quality was similar to background agricultural conditions in SW and SP watersheds with lower swine barn densities coupled with higher percentages of wetlands or lower acres available for swine manure applications. The model provides a useful tool for exploring and identifying similar, unmonitored watersheds in the North Carolina Coastal Plain with potential CAFO manure influences on water quality that might warrant further examination.

North Carolina↗
USGS2019

Potential for increased inundation in flood-prone regions of southeast Florida in response to climate and sea-level changes in Broward County, Florida, 2060–69

The U.S. Geological Survey, in cooperation with Broward County Environmental Planning and Resilience Division, has developed county-scale and local-scale groundwater/surface-water models to study the potential for increased inundation and flooding in eastern Broward County that are due to changes in future climate and sea-level rise. These models were constructed by using MODFLOW 2005, with the surface-water system represented by using the Surface-Water Routing process and a new Urban Runoff process. The local-scale model allowed the use of finer grid resolution in a selected area of the county, whereas the county-scale model provided boundary conditions for the local-scale model and insight into the hydrologic behavior of the larger system. The aquifer layering, properties, and boundaries relied heavily on a previous three-dimensional variable-density solute-transport model of the same area developed by the U.S. Geological Survey. The surface-water system within these new models actively simulates a part of the extensive canal network by using level-pool routing and active structure operations within the Surface-Water Routing process. These models were used to simulate a historical base-case period (1990–99) by using measured data and regional climate model rainfall and potential evapotranspiration output. The simulated flow and water-level results generally captured the behavior of the hydrologic system. A future period (2060–69) was simulated by using regional climate model rainfall and potential evapotranspiration output representing a wetter and drier future and low, intermediate, and high sea-level rise projections. The results were used to evaluate the potential effects on the surface-water drainage system, coastal-structure operation, and wet-season groundwater levels. Future period simulations using the county-scale model indicate that (1) the effects of the changing climate and sea level are much more evident in eastern and coastal areas of Broward County compared to western areas, with increases in groundwater level nearly equivalent to sea-level rise; (2) coastal groundwater-level increases are distributed farther inland in the wetter future scenarios than in the drier future scenarios; (3) water levels at the westernmost groundwater station locations exhibited little change caused by sea-level rise and showed more dependence on changes in precipitation; (4) there was a reduced west-to-east groundwater gradient with increasing sea-level rise; and (5) increased downstream tidal stage at the S–13 structure resulted in increased reliance on the pump to control upstream inland canal stages. Future simulations using the local-scale model indicate similar behavior as seen in the county-scale model: (1) the coastal areas exhibited the largest impacts in groundwater levels in the future scenarios; (2) the westernmost, interior areas exhibited little change during the future scenarios; and (3) there was an increased reliance on the pump at the S–13 coastal structure but to a lesser extent than indicated in the county-scale model because of the reduced temporal scale of the local-scale model. Possible adaptation and mitigation strategies were simulated to evaluate the county-scale and local-scale models’ ability to simulate hydrologic changes. Alterations to S–13 pump operations within the county-scale model were tested, and results indicate a reduced effect of sea-level rise inland of the control structure, but the affected area is spatially limited. The concept of using pumps to reduce the local groundwater levels in two neighborhood-sized areas was tested by using the local-scale model. The MODFLOW 2005 Drain package was used to remove groundwater by using drainage elevations set to zero, 1 foot, and 2 feet above average wet-season groundwater levels. Area 1 was well connected to coastal boundaries, and a high rate of groundwater removal was required, whereas the rate of groundwater removal required was greatly reduced in Area 2, which is less connected to tidal boundaries. Water for these scenarios was assumed to be pumped to tide with no downstream effects.

Florida↗
USGS2022

Drainage infrastructure and groundwater system response to changes in sea level and precipitation, Broward County, Florida

Executive Summary Southeast Florida is highly susceptible to flooding because of its low topography and porous, highly permeable Biscayne aquifer. Rising seas will likely result in increased groundwater levels in parts of Broward County, Florida, that will reduce available soil storage and therefore increase the likelihood of inundation and flooding from precipitation events. Moreover, rising seas may also reduce the capacity of the coastal water-control structures to discharge inland waters to tidal areas, thereby increasing surface-water stage and nearby groundwater levels. Increased rainfall intensity will likely further increase peak surface-water stages and groundwater levels, more quickly fill the reduced soil storage capacity, and increase the likelihood for inundation. Managers and planners in Broward County, Florida, face the challenge of understanding and preparing for the consequent risk to residents, businesses, and critical infrastructure posed by increased sea level and precipitation. The U.S. Geological Survey, in cooperation with the Broward County Environmental Planning and Resilience Division, has developed a groundwater/surface-water model to evaluate the response of the drainage infrastructure and groundwater system in Broward County to projected increases in sea level and potential changes in precipitation. The model was constructed using Modular Finite-Difference Groundwater Flow Model Newton formulation, with the surface-water system represented using the Surface-Water Routing process and the Urban Runoff process. The aquifer layering and flow parameters rely heavily on existing hydrologic flow models developed by the U.S. Geological Survey for the same model area. The surface-water drainage system within this newly developed model actively simulates the extensive canal network using level-pool routing and active structures representing gates, weirs, culverts, and pumps. Steady-state and transient simulation results represented historical conditions (2013–17). The simulated historical groundwater levels and upstream stage and flow at the primary structures generally captured the behavior of the actual hydrologic system. Simulation results incorporating increased sea level and precipitation were used to evaluate the effects of these projected changes on the surface-water drainage system and wet season groundwater levels. Four future sea-level scenarios were simulated by modifying the historical inputs for both steady-state and the transient versions of the model to represent mean sea levels of 0.5, 2.0, 2.5, and 3.0 feet (ft) above the North American Vertical Datum of 1988. These mean sea levels correspond to sea-level rises of 1.05, 2.55, 3.05, and 3.55 ft, respectively, above the 2013–17 mean measured tidal stage. Additional simulations represented a 15-percent increase in rainfall rates using the transient model and a 15-percent increase in rainfall recharge using the steady-state model. The simulated results indicated that (1) the effects of increased sea level were more evident in the easternmost, coastal areas of the county where increases in groundwater levels are nearly equivalent to sea-level rise; (2) groundwater levels west of the coastal water-control structures only changed slightly in response to increased sea level for most scenarios; (3) when the control elevations of the gravity-controlled coastal water-control structures were surpassed by sea-level rise, the resulting increases in upstream stage in the connected primary canal resulted in increased groundwater levels that can propagate into the western parts of the county; (4) the historical west-to-east downward gradient in groundwater levels decreased with increased sea level, and groundwater levels were lower in central parts of the county than areas west and east for the higher sea-level scenarios; (5) simulated upstream stage for most of the primary coastal water-control structures increased with increased sea level, with the largest increases occurring at gravity-controlled structures having the lowest control elevations; (6) total flow through the primary structures increased as sea level increased because of additional groundwater leakage into the surface-water network; (7) the 3.0-ft mean sea-level rise scenario resulted in an increase of 37.10 square miles in area having a wet season average depth to groundwater of less than 2 ft, and an increase of 22.84 square miles in newly inundated areas compared to historical simulation results; and (8) a 15-percent increase in rainfall rate for the entire simulation period produced little increase in upstream stages at the primary structures and an increase in total flow through the primary structures proportional to the increase in rainfall.

Florida↗
USGS2021

Animal reservoirs and hosts for emerging alphacoronaviruses and betacoronaviruses

The ongoing global pandemic caused by coronavirus disease has once again demonstrated the role of the family Coronaviridae in causing human disease outbreaks. Because severe acute respiratory syndrome coronavirus 2 was first detected in December 2019, information on its tropism, host range, and clinical manifestations in animals is limited. Given the limited information, data from other coronaviruses might be useful for informing scientific inquiry, risk assessment, and decision-making. We reviewed endemic and emerging infections of alphacoronaviruses and betacoronaviruses in wildlife, livestock, and companion animals and provide information on the receptor use, known hosts, and clinical signs associated with each host for 15 coronaviruses detected in humans and animals. This information can be used to guide implementation of a One Health approach that involves human health, animal health, environmental, and other relevant partners in developing strategies for preparedness, response, and control to current and future coronavirus disease threats.

Emerging Infectious Diseases↗
USGS2018

Waterbird habitat in California's Central Valley basins under climate, urbanization, and water management scenarios

California's Central Valley provides critical, but threatened habitat and food resources for migrating and wintering waterfowl, shorebirds, and other waterbirds. The Central Valley is comprised of nine basins that were defined by the Central Valley Joint Venture (CVJV) to assist in conservation planning. Basins vary in composition and extent of habitats, which primarily include croplands and wetlands that rely on water supplies shared with other competing human and environmental uses. Changes in climate, urban development, and water supply management are uncertain and could reduce future availability of water supplies supporting waterbird habitats and limit effectiveness of wetland restoration planned by the CVJV to support wintering waterbirds. We modeled 17 plausible scenarios including combinations of three climate projections, three urbanization rates, and five water supply management options to promote agricultural and urban water uses, with and without wetland restoration. Our research examines the reduction in quantity and quality of habitats during the fall migration-wintering period by basin under each scenario, and the efficacy of planned wetland restoration to compensate reductions in flooded areas of wetland habitats. Scenario combinations of projected climate, urbanization, and water supply management options reduced availability of flooded cropland and wetland habitats during fall-winter and degraded the quality of seasonal wetlands (i.e., summer-irrigation for improved forage production), though the extent and frequency of impacts varied by basin. Planned wetland restoration may substantially compensate for scenario-related effects on wetland habitats in each basin. However, results indicate that Colusa, Butte, Sutter, San Joaquin, and Tulare Basins may require additional conservation to support summer-irrigation of seasonal wetlands and winter-flooding of cropland habitats. Still further conservation may be required to provide sufficient areas of flooded seasonal and semi-permanent wetlands in San Joaquin and Tulare Basins during fall-winter. The main objective of this research is to provide decision-support for achieving waterbird conservation goals in the valley and to inform CVJV's regional conservation planning.

California↗
USGS2010

Scale-dependent associations of Band-tailed Pigeon counts at mineral sites

The abundance of Band-tailed Pigeons ( Patagioenas fasciata monilis ) has declined substantially from historic numbers along the Pacific Coast. Identification of patterns and causative factors of this decline are hampered because habitat use data are limited, and temporal and spatial variability patterns associated with population indices are not known. Furthermore, counts are influenced not only by pigeon abundance but also by rate of visitation to mineral sites, which may not be consistent. To address these issues, we conducted mineral site counts during 2001 and 2002 at 20 locations from 4 regions in the Pacific Northwest, including central Oregon and western Washington, USA, and British Columbia, Canada. We developed inference models that consisted of environmental factors and spatial characteristics at multiple spatial scales. Based on information theory, we compared models within a final set that included variables measured at 3 spatial scales (0.03 ha, 3.14 ha, and 7850 ha). Pigeon counts increased from central Oregon through northern Oregon and decreased into British Columbia. After accounting for this spatial pattern, we found that pigeon counts increased 12% ± 2.7 with a 10% increase in the amount of deciduous forested area within 100 m from a mineral site. Also, distance from the mineral site of interest to the nearest known mineral site was positively related to pigeon counts. These findings provide direction for future research focusing on understanding the relationships between indices of relative abundance and complete counts (censuses) of pigeon populations by identifying habitat characteristics that might influence visitation rates. Furthermore, our results suggest that spatial arrangement of mineral sites influences Band-tailed Pigeon counts and the populations which those counts represent.

Pacific Northwest↗
USGS2004

Historical perspectives on the concept of ecosystem degradation

The concept of environmental degradation has evolved with the development of human society and settlement. In early human development, tribes went through a series of cycles of taming or developing mastery over the environment, to utilizing the resources of that environment until they could no longer support the population, which lead to moving on to do it again in a new area. There seems to have been little sense that human activity was causing any degradation, it was only that there was no longer enough food. This sense of the concept of degradation can even be seen as late as the 16th and 17th centuries in North America as Europeans "tamed" the land from the south, east, and north. For the Europeans, this taming of the "dangerous" and "inhospitable" lands even included the indigenous peoples. World-wide, as humans gathered into towns and cities, the impacts on the environment became increasingly widespread. Goods had to be brought to the people from further and further away. While agriculture and herd management were being developed, there was still the sense that these activities were improvements. It is a rather modern social understanding that human activities can and do damage and degrade natural ecosystems. The concept began to dawn when society began to understand that some activities caused degraded human health. Only recently has society begun to understand the need for generally healthy natural ecosystems and this understanding has brought with it a whole host of legal and political actions to make it happpen. ?? International Scientific Publications, New Delhi.

Conference Paper↗
USGS2016

Informing Lake Erie agriculture nutrient management via scenario evaluation

Harmful algal blooms (HABs) have been increasing in extent and intensity in the western basin of Lake Erie. The cyanobacteria Microcystis produces toxins that pose serious threats to animal and human health, resulting in beach closures and impaired water supplies, and have even forced a “do not drink” advisory for the City of Toledo water system for several days in the summer of 2014. The main driver of Lake Erie HABs is elevated phosphorus loading from watersheds draining to the western basin, particularly from the Maumee River watershed (Obenour et al. 2014). Through the 2012 Great Lakes Water Quality Agreement (GLWQA), the U.S. and Canadian governments agreed to revise Lake Erie phosphorus loading targets to decrease HAB severity below levels representing a hazard to ecosystem and human health. New targets limit March-July loadings from the Maumee River to 186 metric tonnes of dissolved reactive phosphorus (DRP) and 860 metric tonnes of total phosphorus (TP) – a 40% reduction from 2008 loads (GLWQA 2016). The Great Lakes region must now determine what policy options are most effective and feasible for meeting those targets. While all sources are important, our focus is on agriculture because it overwhelms other sources. In a conservative ballpark estimate we found that 85% of the Maumee River’s load to Lake Erie comes from farm fertilizers and manures, even though this is only 10% of farmland fertilizer applications (Figure 1). Load targets will not be met without reductions from agriculture. Therefore, the overall goal of this study was to identify potential options for agricultural management to reduce phosphorus loads and lessen future HABs in Lake Erie. We applied multiple watershed models to test the ability of a series of land management scenarios, developed in consultation with agricultural and environmental stakeholders, to reach the proposed targets.

Indiana, Michigan, Ohio↗
USGS2007

Natural bitumen and extra-heavy oil

Since 2005, oil price increases have greatly increased investment in the production of extra- heavy oil and natural bitumen (tar sands or oil sands) to supplement conventional oil supplies. These oils are characterised by their high viscosity, high density (low API gravity), and high concentrations of nitrogen, oxygen, sulphur, and heavy metals. Extra-heavy oil and natural bitumen are the remnants of very large volumes of conventional oils that have been generated and subsequently degraded, principally by bacterial action. Chemically and texturally, they resemble the residuum produced by refinery distillation of light oil. Although these viscous oils are much more costly to extract, transport and refine than conventional oils, production levels have increased to more than 1.6 million barrels per day, or just under 2% of world crude oil production. The resource base of extra-heavy oil and natural bitumen is immense and can easily support a substantial expansion in production. This resource base can make a major contribution to oil supply, if it can be extracted and transformed into useable refinery feedstock at sufficiently high rates and at costs that are competitive with alternative resources. Technology must continue to be developed to address emerging challenges (both environmental and economic) in the market supply chain.

Book chapter↗
USGS2022

Action plan for restoration of coral reef coastal protection services: Case study example and workbook

This report was prepared by the U.S. Environmental Protection Agency (USEPA), Office of Research and Development, as part of the Air, Climate and Energy (ACE) research program, with support from Tetra Tech, Inc., and in collaboration with the National Oceanic and Atmospheric Administration, the U.S. Geological Survey, and The Nature Conservancy. The ACE research program provides scientific information and tools to support USEPA’s commitment to clean air, clean water and sustainable natural resources, even as environmental conditions change. A key component of this is the development of sound science to support adaptation. Adaptation involves preparing for and adjusting to the effects of climate change and its interactions with other global and local stressors. Because these effects are diverse, interactive, and difficult to predict, adapting management of natural resources in this context can be very challenging. Coral reefs—which provide valued ecosystem services such as fisheries, coastal protection, and tourism—are threatened by the effects of increased sea surface temperatures, sea level rise, and intensifying storms. These large-scale stressors are interacting with local stressors such as pollution, overfishing, and recreational misuse to drive ongoing and accelerating declines in coral reef ecosystems. Thus, there is a rising urgency to design and implement climate change adaptation measures that will enable reef resilience in the face of these changes. This includes accounting for, and adjusting to, the combined effects of climate change and local stressors in coral reef protection and restoration efforts. The action plan, example case study, and workbook found in this report demonstrate a structured process for integrating climate-smart design considerations into restoration planning using A Manager’s Guide to Coral Reef Restoration Planning and Design. The focus is a hypothetical coral reef restoration project that has a goal of recovering nature-based coastal protection services using restoration interventions. The intent is to provide readers with a completed example of how to use the Guide workbook to inform a draft action plan, centering on the topic of coastal protection as a burgeoning area of interest in coral reef science and management communities. The information in this hypothetical case study is not intended for direct use; rather, it provides a starting point for more detailed planning that would occur in specific places. And while a full review of the current literature on reef restoration methods is outside the scope of this report, readers are encouraged to use the examples herein as well as in the Guide as a jumping-off point for exploring the rapidly growing body of information on methods, techniques, successes, failures, monitoring challenges and future directions of coral reef restoration in a changing world. The workbook, together with the action plan, can serve as a valuable record of the planning thought process as well as a living document for adaptive management, to be updated through time as improved information becomes available.

EPA Report↗
USGS2018

Using redundant primer sets to detect multiple native Alaskan fish species from environmental DNA

Accurate and timely data regarding freshwater fish communities is important for informed decision-making by local, state, tribal, and federal land and resource managers; however, conducting traditional gear-based fish surveys can be an expensive and time-consuming process, particularly in remote areas, like those that characterize much of Alaska. To help address this challenge, we developed and tested five multi-species environmental DNA (eDNA) primer sets for the simultaneous detection of up to 37 target fish species in a single sample. Using these primer sets can reduce the cost and time needed to perform future studies of fish communities. Our results comparing multiple samples from multiple lakes and streams using multiple next-generation sequencing runs show the efficacy and reproducibility of these primers.

Alaska↗