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At least 541 records · Page 30Linked to original sources
USGS2011

Growth anomalies on the coral genera Acropora and Porites are strongly associated with host density and human population size across the Indo-Pacific

Growth anomalies (GAs) are common, tumor-like diseases that can cause significant morbidity and decreased fecundity in the major Indo-Pacific reef-building coral genera, Acropora and Porites. GAs are unusually tractable for testing hypotheses about drivers of coral disease because of their pan-Pacific distributions, relatively high occurrence, and unambiguous ease of identification. We modeled multiple disease-environment associations that may underlie the prevalence of Acropora growth anomalies (AGA) (n = 304 surveys) and Porites growth anomalies (PGA) (n = 602 surveys) from across the Indo-Pacific. Nine predictor variables were modeled, including coral host abundance, human population size, and sea surface temperature and ultra-violet radiation anomalies. Prevalence of both AGAs and PGAs were strongly host density-dependent. PGAs additionally showed strong positive associations with human population size. Although this association has been widely posited, this is one of the first broad-scale studies unambiguously linking a coral disease with human population size. These results emphasize that individual coral diseases can show relatively distinct patterns of association with environmental predictors, even in similar diseases (growth anomalies) found on different host genera (Acropora vs. Porites). As human densities and environmental degradation increase globally, the prevalence of coral diseases like PGAs could increase accordingly, halted only perhaps by declines in host density below thresholds required for disease establishment.

PLoS ONE↗
USGS2022

A statistical framework for integrating nonparametric proxy distributions into geological reconstructions of relative sea level

Robust, proxy-based reconstructions of relative sea-level (RSL) change are critical to distinguishing the processes that drive spatial and temporal sea-level variability. The relationships between individual proxies and RSL can be complex and are often poorly represented by traditional methods that assume Gaussian likelihood distributions. We develop a new statistical framework to estimate past RSL change based on nonparametric, empirical modern distributions of proxies in relation to RSL, applying the framework to corals and mangroves as an illustrative example. We validate our model by comparing its skill in reconstructing RSL and rates of change to two previous RSL models using synthetic time-series datasets based on Holocene sea-level data from South Florida. The new framework results in lower bias, better model fit, and greater accuracy and precision than the two previous RSL models. We also perform sensitivity tests using sea-level scenarios based on two periods of interest – meltwater pulses (MWPs) and the Holocene – to analyze the sensitivity of the statistical reconstructions to the quantity and precision of proxy data; we define high-precision indicators, such as mangroves and the reef-crest coral Acropora palmata , with 2 σ vertical uncertainties within ± 3 m and lower-precision indicators, such as Orbicella spp., with 2 σ vertical uncertainties within ± 10 m. For reconstructing rapid rates of change in RSL of up to ∼ 40 m kyr −1 , such as those that may have characterized MWPs during deglacial periods, we find that employing the nonparametric model with 5 to 10 high-precision data points per kiloyear enables us to constrain rates to within ± 3 m kyr −1 (1 σ ). For reconstructing RSL with rates of up to ∼ 15 m kyr −1 , as observed during the Holocene, we conclude that employing the model with 5 to 10 high-precision (or a combination of high- and low-precision) data points per kiloyear enables precise estimates of RSL within ± ∼ "> 2 m (2 σ ) and accurate RSL reconstructions with errors ≲ 0.7 m. Employing the nonparametric model with only lower-precision indicators also produces fairly accurate estimates of RSL with errors ≲ 1.50 m, although with less precision, only constraining RSL to ± ∼ "> 3–4 m (2 σ ). Although the model performs better than previous models in terms of bias, model fit, accuracy, and precision, it is computationally expensive to run because it requires inverting large matrices for every sample. The new model also provides minimal gains over similar models when a large quantity of high-precision data are available. Therefore, we recommend incorporating the nonparametric likelihood distributions when no other information (e.g., reef facies or epibionts indicative of shallow-water environments to refine coral elevational uncertainties) or no high-precision data are available at a location or during a given time period of interest.

Advances in Statistical Climatology, Meteorology a↗
USGS2023

Heterotrophy, microbiome, and location effects on restoration efficacy of the threatened coral Acropora palmata

The iconic and threatened Caribbean coral, Acropora palmata , is an essential reef-ecosystem engineer. Understanding the processes underpinning this coral’s survival and growth is essential to restoring this foundational species. Here, we compared replicate A. palmata colonies transplanted along 350 km of Florida’s offshore coral reef to determine holobiont and/or environmental variables that predict transplant success. We found a west-to-east gradient in coral physiology coupled with site-specific coral-associated microbiomes. Interestingly, no variables were linked to coral genet. Our results suggest that the unique oceanographic conditions with periodic upwelling events in the Dry Tortugas provide corals with greater opportunity for heterotrophy that in turn enhances coral growth and survivorship, and positively influences the microbiome. Our findings indicate that restoration efforts in the Dry Tortugas, and other places exhibiting higher food availability, could be most effective for A. palmata .

Florida↗
USGS2018

Nonhydrostatic and surfbeat model predictions of extreme wave run-up in fringing reef environments

The accurate prediction of extreme wave run-up is important for effective coastal engineering design and coastal hazard management. While run-up processes on open sandy coasts have been reasonably well-studied, very few studies have focused on understanding and predicting wave run-up at coral reef-fronted coastlines. This paper applies the short-wave resolving, Nonhydrostatic (XB-NH) and short-wave averaged, Surfbeat (XB-SB) modes of the XBeach numerical model to validate run-up using data from two 1D (alongshore uniform) fringing-reef profiles without roughness elements, with two objectives: i) to provide insight into the physical processes governing run-up in such environments; and ii) to evaluate the performance of both modes in accurately predicting run-up over a wide range of conditions. XBeach was calibrated by optimizing the maximum wave steepness parameter (maxbrsteep) in XB-NH and the dissipation coefficient ( alpha ) in XB-SB) using the first dataset; and then applied to the second dataset for validation. XB-NH and XB-SB predictions of extreme wave run-up ( R max and R 2% ) and its components, infragravity- and sea-swell band swash ( S IG and S SS ) and shoreline setup ( <η> ), were compared to observations. XB-NH more accurately simulated wave transformation but under-predicted shoreline setup due to its exclusion of parameterized wave-roller dynamics. XB-SB under-predicted sea-swell band swash but overestimated shoreline setup due to an over-prediction of wave heights on the reef flat. Run-up (swash) spectra were dominated by infragravity motions, allowing the short-wave (but not wave group) averaged model (XB-SB) to perform comparably well to its more complete, short-wave resolving (XB-NH) counterpart. Despite their respective limitations, both modes were able to accurately predict R max and R 2% .

Coastal Engineering↗
USGS2008

Patch-reef morphology as a proxy for Holocene sea-level variability, Northern Florida Keys, USA

A portion of the northern Florida Keys reef tract was mapped with the NASA Experimental Advanced Airborne Research Lidar (EAARL) and the morphology of patch reefs was related to variations in Holocene sea level. Following creation of a lidar digital elevation model (DEM), geospatial analyses delineated morphologic attributes of 1,034 patch reefs (reef depth, basal area, height, volume, and topographic complexity). Morphometric analysis revealed two morphologically different populations of patch reefs associated with two distinct depth intervals above and below a water depth of 7.7 m. Compared to shallow reefs, the deep reefs were smaller in area and volume and showed no trend in topographic complexity relative to water depth. Shallow reefs were more variable in area and volume and became flatter and less topographically complex with decreasing water depth. The knoll-like morphology of deep reefs was interpreted as consistent with steady and relatively rapidly rising early Holocene sea level that restricted the lateral growth of reefs. The morphology of shallow 'pancake-shaped' reefs at the highest platform elevations was interpreted as consistent with fluctuating sea level during the late Holocene. Although the ultimate cause for the morphometric depth trends remains open to interpretation, these interpretations are compatible with a recent eustatic sea-level curve that hindcasts fluctuating late Holocene sea level. Thus it is suggested that the morphologic differences represent two stages of reef accretion that occurred during different sea-level conditions. ?? 2008 Springer-Verlag.

Coral Reefs↗
USGS2019

Considerations for maximizing the adaptive potential of restored coral populations in the western Atlantic

Active coral restoration typically involves two interventions: crossing gametes to facilitate sexual larval propagation; and fragmenting, growing, and outplanting adult colonies to enhance asexual propagation. From an evolutionary perspective, the goal of these efforts is to establish self‐sustaining, sexually reproducing coral populations that have sufficient genetic and phenotypic variation to adapt to changing environments. Here, we provide concrete guidelines to help restoration practitioners meet this goal for most Caribbean species of interest. To enable the persistence of coral populations exposed to severe selection pressure from many stressors, a mixed provenance strategy is suggested: genetically unique colonies (genets) should be sourced both locally as well as from more distant, environmentally distinct sites. Sourcing three to four genets per reef along environmental gradients should be sufficient to capture a majority of intraspecies genetic diversity. It is best for practitioners to propagate genets with one or more phenotypic traits that are predicted to be valuable in the future, such as low partial mortality, high wound healing rate, high skeletal growth rate, bleaching resilience, infectious disease resilience, and high sexual reproductive output. Some effort should also be reserved for underperforming genets because colonies that grow poorly in nurseries sometimes thrive once returned to the reef and may harbor genetic variants with as yet unrecognized value. Outplants should be clustered in groups of four to six genets to enable successful fertilization upon maturation. Current evidence indicates that translocating genets among distant reefs is unlikely to be problematic from a population genetic perspective but will likely provide substantial adaptive benefits. Similarly, inbreeding depression is not a concern given that current practices only raise first‐generation offspring. Thus, proceeding with the proposed management strategies even in the absence of a detailed population genetic analysis of the focal species at sites targeted for restoration is the best course of action. These basic guidelines should help maximize the adaptive potential of reef‐building corals facing a rapidly changing environment.

Ecological Applications↗
USGS2003

Monthly Strontium/Calcium oscillations in symbiotic coral aragonite: Biological effects limiting the precision of the paleotemperature proxy

In thermodynamic equilibrium with sea water the Sr/Ca ratio of aragonite varies predictably with temperature and the Sr/Ca ratio in coral have thus become a frequently used proxy for past Sea Surface Temperature (SST). However, biological effects can offset the Sr/Ca ratio from its equilibrium value. We report high spatial resolution ion microprobe analyses of well defined skeletal elements in the reef‐building coral Porites lutea that reveal distinct monthly oscillations in the Sr/Ca ratio, with an amplitude in excess of ten percent. The extreme Sr/Ca variations, which we propose result from metabolic changes synchronous with the lunar cycle, introduce variability in Sr/Ca measurements based on conventional sampling techniques well beyond the analytical precision. These variations can limit the accuracy of Sr/Ca paleothermometry by conventional sampling techniques to about 2°C. Our results may help explain the notorious difficulties involved in obtaining an accurate and consistent calibration of the Sr/Ca vs. SST relationship.

Geophysical Research Letters↗
USGS2004

Sediment resuspension and transport patterns on a fringing reef flat, Molokai, Hawaii

Corals are known to flourish in various turbid environments around the world. The quantitative distinction between clear and turbid water in coral habitats is not well defined nor are the amount of sediment in suspension and rates of sedimentation used to evaluate the condition of reef environments well established. This study of sediment resuspension, transport, and resulting deposition on a fringing reef flat off Molokai, Hawaii, uses a year of time-series data from a small, instrumented tripod. It shows the importance of trade winds and ocean wave heights in controlling the movement of sediment. Sediment is typically resuspended daily and the dominant controls on the magnitude of events (10-25 mg/l) are the trade-wind-generated waves and currents and tidal elevation on the reef flat. The net flux of sediment on this reef is primarily along the reef flat in the direction of the prevailing trade winds (to the west), with a secondary direction of slightly offshore, towards a zone of low coral abundance. These results have application to reef studies and reef management in other areas in several ways. First, the observed resuspension and turbidity results from fine-grained terrigenous sediment that appears to be trapped and recycled on the reef flat. Thus corals are subjected to light attenuation by the same particles repeatedly, however small the amount. Secondly, the measurements show high temporal variability (from daily to seasonal scales) of sediment resuspension, indicating that single measurements are inadequate to accurately describe conditions on a reef flat. ?? Springer-Verlag 2004.

Coral Reefs↗
USGS2008

Dual-Carbon sources fuel the OCS deep-reef Community, a stable isotope investigation

The hypothesis that phytoplankton is the sole carbon source for the OCS deep-reef community (>60 m) was tested. Trophic structure for NE Gulf of Mexico deep reefs was analyzed via carbon and nitrogen stable isotopes. Carbon signatures for 114 entities (carbon sources, sediment, fishes, and invertebrates) supported surface phytoplankton as the primary fuel for the deep reef. However, a second carbon source, the macroalga Sargassum, with its epiphytic macroalgal associate, Cladophora liniformis, was also identified. Macroalgal carbon signatures were detected among 23 consumer entities. Most notably, macroalgae contributed 45 % of total carbon to the 13C isotopic spectrum of the particulate-feeding reef-crest gorgonian Nicella. The discontinuous spatial distribution of some sessile deep-reef invertebrates utilizing pelagic macroalgal carbon may be trophically tied to the contagious distribution of Sargassum biomass along major ocean surface features.

Proceedings of the 11th International Coral Reef S↗
USGS2003

Staghorn tempestites in the Florida Keys

Thirty-one samples of transported Holocene Acropora cervicornis "sticks" sampled from carbonate sand tempestite accumulations at 19 sites along a 180-km-long stretch of the Florida reef tract were dated using the radiocarbon (14C) method. The "modern fossils" collected from just a few centimeters below the surface ranged in age from 0.5 to 6.4 ka. The majority lived between 3.5 and 5.5 ka. The time of transport and deposition is not known. There were no A. cervicornis samples centered around 4.5 ka. Acropora cervicornis is living on many Florida reefs, but the youngest tempestite sample was 500 years old. Two 500-year-long gaps in dated staghorn suggest that the documented decline in living A. cervicornis over the past 25 years may not be without precedent.

Coral Reefs↗
USGS2004

Analysis of coral mucus as an improved medium for detection of enteric microbes and for determining patterns of sewage contamination in reef environments

Traditional fecal indicator bacteria are often subject to a high degree of die-off and dilution in tropical marine waters, particularly in offshore areas such as coral reefs. Furthermore, these microbes are often not associated with human waste, and their presence may not be indicative of health risk. To address the offshore extent of wastewater contamination in the Florida Keys reef tract, we assayed coral surfaces for the presence of human-specific enteric viruses. The overlying water column and surface mucopolysaccharide (mucus) layers from scleractinian corals were sampled from three stations along a nearshore-to-offshore transect beginning at Long Key in the middle Florida Keys, USA. Samples were assayed for standard bacterial water quality indicators (fecal coliform bacteria and enterococci) and for human enteroviruses by direct reverse transcriptase-polymerase chain reaction (RT-PCR). The concentration of the bacterial indicators was greatest at the nearshore station in both the water column and corals, and decreased with distance from shore; no indicator bacteria were detected at the offshore station. Whereas human enteroviruses were not detected in any of the water column samples, they were detected in 50–80% of coral mucus samples at each station. These data provide evidence that human sewage is impacting the reef tract up to ~6.5 km from shore in the middle Florida Keys and that coral mucus is an efficient trap for viral markers associated with anthropogenic pollution.

Florida↗
USGS2024

Modeling the potential spread of the non-native regal demoiselle, Neopomacentrus cyanomos, in the western Atlantic

Predicting the potential distribution of a non-native species can assist management efforts to mitigate impacts on recipient ecosystems. However, such predictions are lacking for marine species, such as the non-native regal demoiselle, Neopomacentrus cyanomos , that is currently expanding its distribution in the western Atlantic. We used correlative species distribution models with three common algorithms to predict suitable habitat for N. cyanomos in the region. We compared models developed using native, non-native, and global occurrences to differentiate drivers across separate ranges using a suite of 12 environmental characteristics. While final models included an ensemble of variables, the majority ranked the combined effect of temperature variables as a key predictor correlated with the distribution of N. cyanomos. Habitat suitability increased as water temperatures increased beyond 16 °C and where annual thermal ranges were greater than 10 °C at the shallowest depth with substrate within a study cell (~ 9.2 km 2 resolution). Habitat suitability also increased where maximum surface temperatures were greater than 27 °C. In the non-native range, the proportion of reef available in each cell was another important variable increasing the suitable habitat for N. cyanomos . Our models predicted high habitat suitability for N. cyanomos throughout the Greater Caribbean, in higher latitudes along North and South American Atlantic coasts, in the eastern Pacific Ocean, and highlights key areas where managers can monitor and target potential removal efforts. The distribution of this non-native species is likely to continue expanding throughout the region with little known about potential implications on native communities.

Coral Reefs↗
USGS2002

Geology and hydrogeology of the Caribbean Islands aquifer system of the Commonwealth of Puerto Rico and the U.S. Virgin Islands

Poorly lithified to unconsolidated carbonate and clastic sedimentary rocks of Tertiary (Oligocene to Pliocene) and Quaternary (Pleistocene to Holocene) age compose the South Coast aquifer and the North Coast limestone aquifer system of Puerto Rico; poorly lithified to unlithified carbonate rocks of late Tertiary (early Miocene to Pliocene) age make up the Kingshill aquifer of St. Croix, U.S. Virgin Islands. The South Coast aquifer, North Coast limestone aquifer system, and Kingshill aquifer are the most areally extensive and function as the major sources of ground water in the U.S. Caribbean Islands Regional Aquifer-System Analysis (CI-RASA) study area. In Puerto Rico's South Coast ground-water province, more than 1,000 meters of clastic and carbonate rocks of Oligocene to Pliocene age infill the South Coast Tertiary Basin. The pattern of lithofacies within this basin appears to have been controlled by changes in base level that were, at times, dominated by tectonic movement (uplift and subsidence), but were also influenced by eustasy. Deposition of the 70-kilometer long and 3- to 8-kilometer wide fan-delta plain that covers much of the South Coast ground-water province occurred largely in response to glacially-induced changes in sea level and climate during the Quaternary period. Tectonic movement played a much less important role during the Quaternary. The North Coast ground-water province of Puerto Rico is underlain by homoclinal coastal plain wedge of carbonate and siliciclastic rocks that infill the North Coast Tertiary Basin and thicken to more than 1,700 meters. A thin basal siliciclastic sequence of late Oligocene age is overlain by a thick section of mostly carbonate rocks of Oligocene to middle Miocene age. Globigerinid limestone of late Miocene to Pliocene age crops out and lies in the shallow subsurface areas of northwestern Puerto Rico. Oligocene to middle Miocene age rocks tentatively can be divided into five depositional sequences and associated systems tracts; these rocks record carbonate and minor siliciclastic deposition that occurred in response to changes in relative sea level. The Cibao Formation represents the most complex of these sequences and contains a varied facies of carbonate, mixed carbonate-siliciclastic, and siliciclastic rocks that reflect differential uplift, subsidence, and transgression of the sea. Uplift, graben formation, and gradual shallowing of the sea are reflected within the bathyal-dominated sedimentary facies of the Kingshill Limestone in St. Croix, U.S. Virgin Islands. Reef-tract limestone beds of Pliocene age were subject to exposure, resubmergence, and meteoric leaching of aragonitic skeletal debris; these beds contain patchy lenses of dolomite that are restricted to a small, structurally-controlled embayment. The South Coast aquifer, the principal water-bearing unit of Puerto Rico's South Coast ground-water province, consists of boulder- to silt-size detritus formed by large and small coalescing fan deltas of Pleistocene to Holocene age. Deep well data indicates that it is possible to vertically separate and group a highly complex and irregular-bedded detrital sequence that underlies distal parts of the fan-delta plain into discrete water-bearing units if correlated with 30- to 40-meter thick, eustatically-controlled depositional cycles. Lithofacies maps show that greatest hydraulic conductivity within the fan-delta plain is generally associated with proximal fan and midfan areas. Distal and interfan areas are least permeable. Alluvial valley aquifers located in the western part of the South Coast ground-water province are important local sources of water supply and appear to contain some of the same physical and hydraulic characteristics as the South Coast aquifer. Older sedimentary rocks within the basin are poor aquifers; conglomeratic beds are well-cemented, and carbonate beds do not contain well-developed solution features, except locally where the beds are overlain by alluvium. Ground-water occurs under unconfined conditions in proximal and midfan areas. Confined conditions within deeper parts of the system and in interfan and some midfan areas are created largely by the intercalated nature of discontinuous fine-grained beds that retard vertical ground-water movement. The development of water resources in southern Puerto Rico has modified the hydrologic system of the South Coast aquifer considerably. Under predevelopment conditions, the South Coast aquifer was recharged in the unconfined, proximal fan and some midfan areas by infrequent rainfall and seepage from streams near the fan apex. Discharge occurred as seabed seepage, baseflow discharge along the lower coastal reach of streams, seepage to coastal wetlands, or evapotranspiration in areas underlain by a shallow water table. Under development conditions, seepage from irrigation canals and areal recharge from furrow irrigation represented a principal mechanism for recharge to the aquifer. Increased ground-water withdrawals in the 1960's and 1970's resulted in declines in the water table to below sea level in some places and intrusion of salt water into the aquifer. By the middle 1980's, a reduction in ground-water withdrawals and a shift from furrow irrigation to drip-irrigation techniques resulted in the recovery of water levels. Under present-day (1986) conditions, regional ground-water flow is coastward but with local movement to some well fields. In addition to the discharge mechanisms described above, ground-water discharges also to coastal canals. The North Coast limestone aquifer system consists of limestone, lesser amounts of dolomite, and minor clastic detritus of Oligocene to Pliocene age that form an unconfined upper aquifer and a confined lower aquifer; these aquifers are separated by a clay, mudstone, and marl confining unit. Topographic relief and incision of carbonate coastal plain rocks by streams are the principal factors controlling the direction of ground-water flow. The North Coast limestone aquifer system is recharged principally by precipitation that enters the upper and lower aquifers where they crop out. Regional groundwater movement from the upper aquifer is to the major rivers, wells, coastal wetlands, coastal, nearshore, and offshore springs, or as seabed seepage. Regional discharge from the lower aquifer is to the major rivers along its unconfined parts or where the confining unit has been breached by streams. Discharge from the lower aquifer also occurs in the San Juan area where the Mucarabones Sand provides an avenue for diffuse upward ground-water flow. Transmissivity within the upper limestone aquifer appears to be largely regulated by the thickness of the freshwater lens. The lens is thickest and transmissivity is greatest in interstream areas that lie in a zone that closely corresponds to the landwardmost extent of the underlying saltwater wedge. Hydraulic conductivity of the upper aquifer generally increases in a coastward direction and reflects lithologic control, karstification in the upper 30 to 100 meters of the section, and enhanced permeability in a zone of freshwater and saltwater mixing. Transmissivity of the lower aquifer is an order of magnitude smaller than that of the upper aquifer; highest transmissivities in the lower aquifer largely correspond to a coarse grainstone-packstone and coral-patch-reef depositional facies contained within the outcropping parts of the Montebello Limestone Member and its subsurface equivalents. Porosity within the North Coast limestone aquifer system is high in grainstone-packstones and low in wackestone and marl. Dolomitized zones and moldic grainstone-packstone strata are the most porous carbonate rocks, but occur in thin beds that usually are only a few meters thick. Processes of karstification that include the development of caverous zones and large vugs, and dissolution along possible regional fracture sets has enhanced permeability within the upper part of the aquifer system. Stratigraphic and lithologic control play an important role controlling permeability within the lower part of the system. The Kingshill aquifer of St. Croix, in large part, is composed of deepwater limestone that contains only microscopic pores and is poorly permeable; however, the upper part of the aquifer, a shallow-water skeletal and reef limestone, is fairly permeable, but restricted in areal extent. Permeability within these uppermost beds of the aquifer has been enhanced by meteoric leaching, dissolution within a mixing zone of saltwater and fresh water, and dolomitization. However, most large-yield wells completed in the Kingshill aquifer are also screened in alluvium that overlies or infills incised channels. The alluvial deposits serve as a temporary storage zone for rainfall, runoff, and ground water slowly entering the Kingshill aquifer.

Puerto Rico↗
USGS2005

Characterizing lesions in corals from American Samoa

The study of coral disease has suffered from an absence of systematic approaches that are commonly used to determine causes of diseases in animals. There is a critical need to develop a standardized and portable nomenclature for coral lesions in the field and to incorporate more commonly available biomedical tools in coral disease surveys to determine the potential causes of lesions in corals. We characterized lesions in corals from American Samoa based on gross and microscopic morphology and classified them as discoloration, growth anomalies, or tissue loss. The most common microscopic finding in corals manifesting discoloration was the depletion of zooxanthellae, followed by necrosis, sometimes associated with invasive algae or fungi. The most common microscopic lesion in corals manifesting tissue loss was cell necrosis often associated with algae, fungi, or protozoa. Corals with growth anomaly had microscopic evidence of hyperplasia of gastrovascular canals, followed by necrosis associated with algae or metazoa (polychaete worms). Several species of apparently normal corals also had microscopic changes, including the presence of bacterial aggregates or crustacea in tissues. A single type of gross lesion (e.g., discoloration) could have different microscopic manifestations. This phenomenon underlines the importance of using microscopy to provide a more systematic description of coral lesions and to detect potential pathogens associated with these lesions.

Coral Reefs↗
USGS2006

Magnesium content within the skeletal architecture of the coral Montastraea faveolata : locations of brucite precipitation and implications to fine-scale data fluctuations

Small portions of coral cores were analyzed using a high-resolution laser ablation inductively coupled plasma mass spectrometer (LA ICP-MS) to determine the geochemical signatures within and among specific skeletal structures in the large framework coral, Montastraea faveolata . Vertical transects were sampled along three parallel skeletal structures: endothecal (septal flank), corallite wall, and exothecal (costal flank) areas. The results demonstrate that trace element levels varied among the three structures. Magnesium (Mg) varied among adjacent structures and was most abundant within the exothecal portion of the skeleton. Scanning electron microscopy (SEM) revealed the presence of hexagonal crystals forming thick discs, pairs or doublets of individual crystals, and rosettes in several samples. High Mg within these crystals was confirmed with energy dispersive spectroscopy (EDS), infrared spectrometry, and LA ICP-MS. The chemical composition is consistent with the mineral brucite [Mg(OH 2 )]. These crystals are located exclusively in the exothecal area of the skeleton, are often associated with green endolithic algae, and are commonly associated with increased Mg levels found in the adjacent corallite walls. Although scattered throughout the exothecal, the brucite crystals are concentrated within green bands where levels of Mg increase substantially relative to other portions of the skeleton. The presence and locations of high-Mg crystals may explain the fine-scale fluctuations in Mg data researchers have been questioning for years.

Florida↗
USGS2007

Bleaching increases likelihood of disease on Acropora palmatao (Lamarck) in Hawksnest Bay, St John, US Virgin Islands

Anomalously high water temperatures may enhance the likelihood of coral disease outbreaks by increasing the abundance or virulence of pathogens, or by increasing host susceptibility. This study tested the compromised-host hypothesis, and documented the relationship between disease and temperature, through monthly monitoring of Acropora palmata colonies from May 2004 to December 2006, in Hawksnest Bay, St John, US Virgin Islands (USVI). Disease prevalence and the rate of change in prevalence showed a positive linear relationship with water temperature and rate of change in water temperature, respectively, but only in 2005 during prolonged periods of elevated temperature. Both bleached and unbleached colonies showed a positive relationship between disease prevalence and temperature in 2005, but the average area of disease-associated mortality increased only for bleached corals, indicating host susceptibility, rather than temperature per se, influenced disease severity on A. palmata .

Virgin Islands↗
USGS2008

Overgrowth of fungi (endolithic hypermycosis) associated with multifocal to diffuse distinct amorphous dark discoloration of corals in the Indo-Pacific

Coral disease surveys in American Samoa and Hawai‘i revealed colonies with a distinct dark discoloration affecting 20–60% of the colony surface (Fig. 1 a). In some cases, tissue loss with algal infiltration was present within discolored areas. On microscopy, these lesions had marked overgrowth of the coral skeleton and tissues with septate branching structures that stained positive with Grocott’s Methenamine Silver (fungal hyphae) accompanied by necrosis and fragmentation of coral tissues (Fig. 1 b). We have observed this condition grossly and microscopically in Pavona varians , Psammocora nierstraszi , and Montipora sp. in American Samoa and in Pavona maldivensis and P. varians in Hawai‘i. This condition resembles Dark Spots Disease from the Caribbean (Solano et al. 1993 ) that also shows endolithic hypermycosis (Galloway et al. 2007 ), suggesting that the association between dark discoloration of corals and overgrowth of endolithic fungi may be common (Western Atlantic, Indo-Pacific). Based on gross and microscopic morphology, tissue atrophy may precede overgrowth of endolithic fungi, but this awaits confirmation through systematic studies that monitor the development of lesions over time (pathogenesis). Using standardized terminology (Work and Aeby 2006 ) to describe lesions facilitates regional comparisons of coral disease.

Hawai'i↗