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Effects of hydrologic infrastructure on flow regimes of California's Central Valley rivers: Implications for fish populations

Alteration of natural flow regimes is generally acknowledged to have negative effects on native biota; however, methods for defining ecologically appropriate flow regimes in managed river systems are only beginning to be developed. Understanding how past and present water management has affected rivers is an important part of developing such tools. In this paper, we evaluate how existing hydrologic infrastructure and management affect streamflow characteristics of rivers in the Central Valley, California and discuss those characteristics in the context of habitat requirements of native and alien fishes. We evaluated the effects of water management by comparing observed discharges with estimated discharges assuming no water management ("full natural runoff"). Rivers in the Sacramento River drainage were characterized by reduced winter–spring discharges and augmented discharges in other months. Rivers in the San Joaquin River drainage were characterized by reduced discharges in all months but particularly in winter and spring. Two largely unaltered streams had hydrographs similar to those based on full natural runoff of the regulated rivers. The reduced discharges in the San Joaquin River drainage streams are favourable for spawning of many alien species, which is consistent with observed patterns of fish distribution and abundance in the Central Valley. However, other factors, such as water temperature, are also important to the relative success of native and alien resident fishes. As water management changes in response to climate change and societal demands, interdisciplinary programs of research and monitoring will be essential for anticipating effects on fishes and to avoid unanticipated ecological outcomes.

California

Determining the effects of dams on subdaily variation in river flows at a whole-basin scale

River regulation can alter the frequency and magnitude of subdaily flow variations causing major impacts on ecological structure and function. We developed an approach to quantify subdaily flow variation for multiple sites across a large watershed to assess the potential impacts of different dam operations (flood control, run-of-river hydropower and peaking hydropower) on natural communities. We used hourly flow data over a 9-year period from 30 stream gages throughout the Connecticut River basin to calculate four metrics of subdaily flow variation and to compare sites downstream of dams with unregulated sites. Our objectives were to (1) determine the temporal scale of data needed to characterize subdaily variability; (2) compare the frequency of days with high subdaily flow variation downstream of dams and unregulated sites; (3) analyse the magnitude of subdaily variation at all sites and (4) identify individual sites that had subdaily variation significantly higher than unregulated locations. We found that estimates of flow variability based on daily mean flow data were not sufficient to characterize subdaily flow patterns. Alteration of subdaily flows was evident in the number of days natural ranges of variability were exceeded, rather than in the magnitude of subdaily variation, suggesting that all rivers may exhibit highly variable subdaily flows, but altered rivers exhibit this variability more frequently. Peaking hydropower facilities had the most highly altered subdaily flows; however, we observed significantly altered ranges of subdaily variability downstream of some flood-control and run-of-river hydropower dams. Our analysis can be used to identify situations where dam operating procedures could be modified to reduce the level of hydrologic alteration. ?? 2009 John Wiley & Sons, Ltd.

River Research and Applications

Urbanization in a great plains river: Effects on fishes and food webs

Spatial variation of habitat and food web structure of the fish community was investigated at three reaches in the Kansas River, USA to determine if ??13C variability and ??15N values differ longitudinally and are related to urbanization and instream habitat. Fish and macroinvertebrates were collected at three river reaches in the Kansas River classified as the less urbanized reach (no urban in riparian zone; 40% grass islands and sand bars, braided channel), intermediate (14% riparian zone as urban; 22% grass islands and sand bars) and urbanized (59% of riparian zone as urban; 6% grass islands and sand bars, highly channelized) reaches in June 2006. The less urbanized reach had higher variability in ??13C than the intermediate and urbanized reaches, suggesting fish from these reaches utilized a variety of carbon sources. The ??15N also indicated that omnivorous and detritivorous fish species tended to consume prey at higher trophic levels in the less urbanized reach. Channelization and reduction of habitat related to urbanization may be linked to homogenization of instream habitat, which was related to river food webs. ?? 2009.

River Research and Applications

Reference condition approach to restoration planning

Ecosystem restoration planning requires quantitative rigor to evaluate alternatives, define end states, report progress and perform environmental benefits analysis (EBA). Unfortunately, existing planning frameworks are, at best, semi-quantitative. In this paper, we: (1) describe a quantitative restoration planning approach based on a comprehensive, but simple mathematical framework that can be used to effectively apply knowledge and evaluate alternatives, (2) use the approach to derive a simple but precisely defined lexicon based on the reference condition concept and allied terms and (3) illustrate the approach with an example from the Upper Mississippi River System (UMRS) using hydrologic indicators. The approach supports the development of a scaleable restoration strategy that, in theory, can be expanded to ecosystem characteristics such as hydraulics, geomorphology, habitat and biodiversity. We identify three reference condition types, best achievable condition (A BAC), measured magnitude (MMi which can be determined at one or many times and places) and desired future condition (ADFC) that, when used with the mathematical framework, provide a complete system of accounts useful for goal-oriented system-level management and restoration. Published in 2010 by John Wiley & Sons, Ltd.

River Research and Applications

Evaluation of single and two-stage adaptive sampling designs for estimation of density and abundance of freshwater mussels in a large river

Reliable estimates of abundance are needed to assess consequences of proposed habitat restoration and enhancement projects on freshwater mussels in the Upper Mississippi River (UMR). Although there is general guidance on sampling techniques for population assessment of freshwater mussels, the actual performance of sampling designs can depend critically on the population density and spatial distribution at the project site. To evaluate various sampling designs, we simulated sampling of populations, which varied in density and degree of spatial clustering. Because of logistics and costs of large river sampling and spatial clustering of freshwater mussels, we focused on adaptive and non-adaptive versions of single and two-stage sampling. The candidate designs performed similarly in terms of precision (CV) and probability of species detection for fixed sample size. Both CV and species detection were determined largely by density, spatial distribution and sample size. However, designs did differ in the rate that occupied quadrats were encountered. Occupied units had a higher probability of selection using adaptive designs than conventional designs. We used two measures of cost: sample size (i.e. number of quadrats) and distance travelled between the quadrats. Adaptive and two-stage designs tended to reduce distance between sampling units, and thus performed better when distance travelled was considered. Based on the comparisons, we provide general recommendations on the sampling designs for the freshwater mussels in the UMR, and presumably other large rivers.

River Research and Applications

Beaver assisted river valley formation

We examined how beaver dams affect key ecosystem processes, including pattern and process of sediment deposition, the composition and spatial pattern of vegetation, and nutrient loading and processing. We provide new evidence for the formation of heterogeneous beaver meadows on riverine system floodplains and terraces where dynamic flows are capable of breaching in‐channel beaver dams. Our data show a 1.7‐m high beaver dam triggered overbank flooding that drowned vegetation in areas deeply flooded, deposited nutrient‐rich sediment in a spatially heterogeneous pattern on the floodplain and terrace, and scoured soils in other areas. The site quickly de‐watered following the dam breach by high stream flows, protecting the deposited sediment from future re‐mobilization by overbank floods. Bare sediment either exposed by scouring or deposited by the beaver flood was quickly colonized by a spatially heterogeneous plant community, forming a beaver meadow. Many willow and some aspen seedlings established in the more heavily disturbed areas, suggesting the site may succeed to a willow carr plant community suitable for future beaver re‐occupation. We expand existing theory beyond the beaver pond to include terraces within valleys. This more fully explains how beavers can help drive the formation of alluvial valleys and their complex vegetation patterns as was first postulated by Ruedemann and Schoonmaker in 1938.

Colorado

Cumulative effects of restoration efforts on ecological characteristics of an open water area within the Upper Mississippi River

Ecological restoration efforts in large rivers generally aim to ameliorate ecological effects associated with large-scale modification of those rivers. This study examined whether the effects of restoration efforts-specifically those of island construction-within a largely open water restoration area of the Upper Mississippi River (UMR) might be seen at the spatial scale of that 3476ha area. The cumulative effects of island construction, when observed over multiple years, were postulated to have made the restoration area increasingly similar to a positive reference area (a proximate area comprising contiguous backwater areas) and increasingly different from two negative reference areas. The negative reference areas represented the Mississippi River main channel in an area proximate to the restoration area and an open water area in a related Mississippi River reach that has seen relatively little restoration effort. Inferences on the effects of restoration were made by comparing constrained and unconstrained models of summer chlorophyll a (CHL), summer inorganic suspended solids (ISS) and counts of benthic mayfly larvae. Constrained models forced trends in means or in both means and sampling variances to become, over time, increasingly similar to those in the positive reference area and increasingly dissimilar to those in the negative reference areas. Trends were estimated over 12- (mayflies) or 14-year sampling periods, and were evaluated using model information criteria. Based on these methods, restoration effects were observed for CHL and mayflies while evidence in favour of restoration effects on ISS was equivocal. These findings suggest that the cumulative effects of island building at relatively large spatial scales within large rivers may be estimated using data from large-scale surveillance monitoring programs. Published in 2010 by John Wiley & Sons, Ltd.

River Research and Applications

Ascent of neotropical migratory fish in the Itaipu Reservoir fish pass

The Piracema Canal is a complex 10-km fish pass system that climbs 120m to connect the Paran?? River to the Itaipu Reservoir along the Brazil-Paraguay border. The canal was constructed to allow migratory fishes to reach suitable habitats for reproduction and feeding in tributaries upstream from the reservoir. The Piracema Canal attracted 17 of the 19 long-distance migratory species that have been recorded in the Paran?? River Basin and Paraguay-Paran?? Basin. However, the incidence of migratory fish decreased from downstream to upstream, with the pattern of decrease depending on species. Overall, 0.5% of the migratory fish that entered the Piracema Canal and segment 1, eventually were able to reach segment 5 and potentially Itaipu Reservoir. Ascension rate was examined relative to various physical attributes of canal segments; maximum water velocity emerged as the most influential variable affecting fish passage. Water velocity may be manipulated by controlling water discharge, and by re-engineering critical sections of the canal. Because the Itaipu Reservoir flooded a set of falls that separated two distinct biogeographical regions, facilitating fish movements through the Piracema Canal into the Itaipu Reservoir presents a management dilemma that requires deliberation in the context of the fish assemblages rather than on selected migratory species. ?? 2010 John Wiley & Sons, Ltd.

River Research and Applications

Establishing spatial trends in water chemistry and stable isotopes (δ 15 N and δ 13 C) in the Elwha River prior to dam removal and salmon recolonization

Two high-head dams on the Elwha River in Washington State (USA) have changed the migratory patterns of resident and anadromous fish, limiting Pacific salmon to the lower 7.9 km of a river that historically supported large Pacific salmon runs. To document the effects of the dams prior to their removal, we measured carbon and nitrogen stable isotope ratios of primary producers, benthic macroinvertebrates, and fish, and water chemistry above, between and below the dams. We found that δ 15 N was significantly higher in fish, stoneflies, black flies, periphyton and macroalgae where salmon still have access. Fish and chloroperlid stoneflies were enriched in δ 13 C, but the values were more variable than in δ 15 N. For some taxa, there were also differences between the two river sections that lack salmon, suggesting that factors other than marine-derived nutrients are structuring longitudinal isotopic profiles. Consistent with trophic theory, macroalgae had the lowest δ 15 N, followed by periphyton, macroinvertebrates and fish, with a range of 6.9, 6.2 and 7.7‰ below, between, and above the dams, respectively. Water chemistry analyses confirmed earlier reports that the river is oligotrophic. Phosphorous levels in the Elwha were lower than those found in other regional rivers, with significant differences among regulated, unregulated and reference sections. The removal of these dams, among the largest of such projects ever attempted, is expected to facilitate the return of salmon and their marine-derived nutrients (MDN) throughout the watershed, possibly altering the food web structure, nutrient levels and stable isotope values that we documented.

Washington

A comparison of avian communities and habitat characteristics in floodplain forests associated with valley plugs and unchannelized streams

Channelization of streams associated with floodplain forested wetlands has occurred extensively throughout the world and specifically in the southeastern United States. Channelization of fluvial systems alters the hydrologic and sedimentation processes that sustain these systems. In western Tennessee, channelization and past land-use practices have caused drastic geomorphic and hydrologic changes, resulting in altered habitat conditions that may affect avian communities. The objective of this study was to determine if there were differences in avian communities utilizing floodplain forests along unchannelized streams compared to channelized streams with valley plugs, areas where sediment has completely filled the channel. During point count surveys, 58 bird species were observed at unchannelized sites and 60 species were observed at valley plug sites. Species associated with baldcypress-tupelo ( Taxodium-Nyssa ) swamps (e.g. Great Egret ( Ardea albus ) and Black-crowned Night Heron ( Nycticorax nycticorax )) and mature hardwood forests with open midstories (e.g. Eastern Wood-Pewee ( Contopus virens ), Yellow-throated Vireo ( Vireo flavifrons ), Cerulean Warbler ( Dendroica cerulea ) and Scarlet Tanager ( Piranga olivacea )) were either only found at unchannelized sites or were more abundant at unchannelized sites. Conversely, species associated with open and early successional habitats (e.g. Tree Swallow ( Tachycineta bicolor ), Northern Mockingbird ( Mimus polyglottos ) and Blue Grosbeak ( Passerina caerulea )) were either only found at valley plug sites or were more abundant at valley plug sites. Results of habitat modelling suggest that the habitat characteristics of floodplain forests at unchannelized sites are more suitable for Neotropical migrant bird species of conservation concern in the region than at valley plug sites. This study, in combination with previous research, demonstrates the ecological impacts of valley plugs span across abiotic and biotic processes and tropic levels.

River Research and Applications

Regulation leads to increases in riparian vegetation, but not direct allochthonous inputs, along the Colorado River in Grand Canyon, Arizona

Dams and associated river regulation have led to the expansion of riparian vegetation, especially nonnative species, along downstream ecosystems. Nonnative saltcedar is one of the dominant riparian plants along virtually every major river system in the arid western United States, but allochthonous inputs have never been quantified along a segment of a large river that is dominated by saltcedar. We developed a novel method for estimating direct allochthonous inputs along the 387km-long reach of the Colorado River downstream of Glen Canyon Dam that utilized a GIS vegetation map developed from aerial photographs, empirical and literature-derived litter production data for the dominant vegetation types, and virtual shorelines of annual peak discharge (566m 3s -1 stage elevation). Using this method, we estimate that direct allochthonous inputs from riparian vegetation for the entire reach studied total 186metric tonsyear -1, which represents mean inputs of 470gAFDMm -1year -1 of shoreline or 5.17gAFDMm -2year -1 of river surface. These values are comparable to allochthonous inputs for other large rivers and systems that also have sparse riparian vegetation. Nonnative saltcedar represents a significant component of annual allochthonous inputs (36% of total direct inputs) in the Colorado River. We also estimated direct allochthonous inputs for 46.8km of the Colorado River prior to closure of Glen Canyon Dam using a vegetation map that was developed from historical photographs. Regulation has led to significant increases in riparian vegetation (270-319% increase in cover, depending on stage elevation), but annual allochthonous inputs appear unaffected by regulation because of the lower flood peaks on the post-dam river. Published in 2010 by John Wiley & Sons, Ltd.

River Research and Applications

Simulated effects of host fish distribution on juvenile unionid mussel dispersal in a large river

Larval mussels (Family Unionidae) are obligate parasites on fish, and after excystment from their host, as juveniles, they are transported with flow. We know relatively little about the mechanisms that affect dispersal and subsequent settlement of juvenile mussels in large rivers. We used a three-dimensional hydrodynamic model of a reach of the Upper Mississippi River with stochastic Lagrangian particle tracking to simulate juvenile dispersal. Sensitivity analyses were used to determine the importance of excystment location in two-dimensional space (lateral and longitudinal) and to assess the effects of vertical location (depth in the water column) on dispersal distances and juvenile settling distributions. In our simulations, greater than 50% of juveniles mussels settled on the river bottom within 500 m of their point of excystment, regardless of the vertical location of the fish in the water column. Dispersal distances were most variable in environments with higher velocity and high gradients in velocity, such as along channel margins, near the channel bed, or where effects of river bed morphology caused large changes in hydraulics. Dispersal distance was greater and variance was greater when juvenile excystment occurred in areas where vertical velocity ( w ) was positive (indicating an upward velocity) than when w was negative. Juvenile dispersal distance is likely to be more variable for mussels species whose hosts inhabit areas with steeper velocity gradients (e.g. channel margins) than a host that generally inhabits low-flow environments (e.g. impounded areas).

Illinois;Iowa

Effects of flow releases on macroinvertebrate assemblages in the Indian and Hudson Rivers in the Adirondack Mountains of Northern New York

The effects of flow releases (daily during spring and four times weekly during summer) from a small impoundment on macroinvertebrate assemblages in the lower Indian River and upper Hudson River of northern New York were assessed during the summers of 2005 and 2006. Community indices, feeding guilds, dominant species and Bray–Curtis similarities at three sites on the Indian River, below a regulated impoundment, were compared with those at four control sites on the Cedar River, below a run-of-the-river impoundment of comparable size. The same indices at four less-likely affected sites on the Hudson River, below the mouth of the Indian River, were compared with those at an upstream control site on the Hudson River. Results show that the function and apparent health of macroinvertebrate communities were generally unaffected by atypical flow regimes and/or altered water quality at study reaches downstream from both dams in the Indian, Cedar and Hudson Rivers. The lentic nature of releases from both impoundments, however, produced significant changes in the structure of assemblages at Indian and Cedar River sites immediately downstream from both dams, moderate effects at two Indian River sites 2.4 and 4.0 km downstream from its dam, little or no effect at three Cedar River sites 7.2–34.2 km downstream from its dam, and no effect at any Hudson River site. Bray–Curtis similarities indicate that assemblages did not differ significantly among sites within similar impact categories. The paucity of scrapers at all Indian River sites, and the predominance of filter-feeding Simulium gouldingi and Pisidium compressum immediately below Abanakee dam, show that only minor differences in dominant species and trophic structure of macroinvertebrate communities occurred at affected sites in the Indian River compared to the Cedar River. Thus, flow releases had only a small, localized effect on macroinvertebrate communities in the Indian River.

New York

Effects of flow dynamics on the aquatic-terrestrial transition zone (ATTZ) of lower Missouri river sandbars with implications for selected biota

Sandbars are an important aquatic terrestrial transition zone (ATTZ) in the active channel of rivers that provide a variety of habitat conditions for riverine biota. Channelization and flow regulation in many large rivers have diminished sandbar habitats and their rehabilitation is a priority. We developed sandbar-specific models of discharge-area relationships to determine how changes in flow regime affect the area of different habitat types within the submerged sandbar ATTZ (depth) and exposed sandbar ATTZ (elevation) for a representative sample of Lower Missouri River sandbars. We defined six different structural habitat types within the sandbar ATTZ based on depth or exposed elevation ranges that are important to different biota during at least part of their annual cycle for either survival or reproduction. Scenarios included the modelled natural flow regime, current managed flow regime and two environmental flow options, all modelled within the contemporary river active channel. Thirteen point and wing-dike sandbars were evaluated under four different flow scenarios to explore the effects of flow regime on seasonal habitat availability for foraging of migratory shorebirds and wading birds, nesting of softshell turtles and nursery of riverine fishes. Managed flows provided more foraging habitat for shorebirds and wading birds and more nursery habitat for riverine fishes within the channelized reach sandbar ATTZ than the natural flow regime or modelled environmental flows. Reduced summer flows occurring under natural and environmental flow alternatives increased exposed sandbar nesting habitat for softshell turtle hatchling emergence. Results reveal how management of channelized and flow regulated large rivers could benefit from a modelling framework that couples hydrologic and geomorphic characteristics to predict habitat conditions for a variety of biota.

River Research and Applications

Assessing the impacts of river regulation on native bull trout ( Salvelinus confluentus ) and westslope cutthroat trout ( Oncorhynchus clarkii lewisi ) habitats in the upper Flathead River, Montana, USA

Hungry Horse Dam on the South Fork Flathead River, Montana, USA, has modified the natural flow regimen for power generation, flood risk management and flow augmentation for anadromous fish recovery in the Columbia River. Concern over the detrimental effects of dam operations on native resident fishes prompted research to quantify the impacts of alternative flow management strategies on threatened bull trout (Salvelinus confluentus) and westslope cutthroat trout (Oncorhynchus clarkii lewisi) habitats. Seasonal and life‐stage specific habitat suitability criteria were combined with a two‐dimensional hydrodynamic habitat model to assess discharge effects on usable habitats. Telemetry data used to construct seasonal habitat suitability curves revealed that subadult (fish that emigrated from natal streams to the river system) bull trout move to shallow, low‐velocity shoreline areas at night, which are most sensitive to flow fluctuations. Habitat time series analyses comparing the natural flow regimen (predam, 1929–1952) with five postdam flow management strategies (1953–2008) show that the natural flow conditions optimize the critical bull trout habitats and that the current strategy best resembles the natural flow conditions of all postdam periods. Late summer flow augmentation for anadromous fish recovery, however, produces higher discharges than predam conditions, which reduces the availability of usable habitat during this critical growing season. Our results suggest that past flow management policies that created sporadic streamflow fluctuations were likely detrimental to resident salmonids and that natural flow management strategies will likely improve the chances of protecting key ecosystem processes and help to maintain and restore threatened bull trout and westslope cutthroat trout populations in the upper Columbia River Basin.

Montana

Abiotic & biotic responses of the Colorado River to controlled floods at Glen Canyon Dam, Arizona, USA

Closure of Glen Canyon Dam reduced sand supply to the Colorado River in Grand Canyon National Park by about 94% while its operation has also eroded the park's sandbar habitats. Three controlled floods released from the dam since 1995 suggest that sandbars might be rebuilt and maintained, but only if repeated floods are timed to follow tributary sand deliveries below the dam. Monitoring data show that sandbars are dynamic and that their erosion after bar building is positively related with mean daily discharge and negatively related with tributary sand production after controlled floods. The March 2008 flood affected non-native rainbow trout abundance in the Lees Ferry tailwater, which supports a blue ribbon fishery. Downstream trout dispersal from the tailwater results in negative competitive interactions and predation on endangered humpback chub. Early survival rates of age-0 trout increased more than fourfold following the 2008 flood, and twofold in 2009, relative to prior years (2006-2007). Hatch-date analysis indicated that early survival rates were much higher for cohorts that emerged about 2 months after the 2008 flood relative to cohorts that emerged earlier that year. The 2009 survival data suggest that tailwater habitat improvements persisted for at least a year, but apparently decreased in 2010. Increased early survival rates for trout coincided with the increased availability of higher quality drifting food items after the 2008 flood owing to an increase in midges and black flies, preferred food items of rainbow trout. Repeated floods from the dam might sustainably rebuild and maintain sandbars if released when new tributary sand is available below the tailwater. Spring flooding might also sustain increased trout abundance and benefit the tailwater fishery, but also be a potential risk to humpback chub in Grand Canyon.

Arizona;Nevada;Utah

Emergent sandbar construction for least terns on the Missouri River: Effects on forage fishes in shallow-water habitats

Emergent sandbars on the Missouri River are actively managed for two listed bird species, piping plovers and interior least terns. As a plunge-diving piscivore, endangered least terns rely on ready access to appropriately sized slender-bodied fish: <52 mm total length for adults and <34 mm total length for young chicks. As part of a multi-agency recovery programme, aimed at enhancing nesting habitat for plovers and terns, the U.S. Army Corps of Engineers mechanically created several emergent sandbars on the Missouri River. However, it was unknown whether sandbar construction is a benefit or a detriment to forage abundance for least terns. Therefore, we studied the shallow-water (<1.5 m) fish community near river and mechanically created emergent sandbars during three nesting seasons (2006–2008). We sampled every 2 weeks each year from late May to July within 15–16 areas to document the relative abundance, species richness and size classes of fish. Fish relative abundance was negatively related to depth. Catches were dominated by schooling species, including emerald shiner, sand shiner, spotfin shiner and bigmouth buffalo. Significant inter-annual differences in relative abundance were observed, with generally increasing trends in intra-seasonal relative abundance of shiners and the smallest size classes of fish (<34 mm). Significant differences in the fish communities between the sandbar types were not detected in this study. Results suggest that mechanical sandbar habitats host comparable fish communities at similar levels of relative abundance. Further analyses are required to evaluate if the levels of fish relative abundance are adequate to support least tern foraging and reproduction.

Nebraska, South Dakota

Relations between altered stramflow variability and fish assemblages in Eastern USA streams

Although altered streamflow has been implicated as a major factor affecting fish assemblages, understanding the extent of streamflow alteration has required quantifying attributes of the natural flow regime. We used predictive models to quantify deviation from expected natural streamflow variability for streams in the eastern USA. Sites with >25% change in mean daily streamflow variability compared with what would be expected in a minimally disturbed environment were defined as having altered streamflow variability, based on the 10th and 90th percentiles of the distribution of streamflow variability at 1279 hydrological reference sites. We also used predictive models to assess fish assemblage condition and native species loss based on the proportion of expected native fish species that were observed. Of the 97 sites, 49 (50.5%) were classified as altered with reduced streamflow variability, whereas no sites had increased streamflow variability. Reduced streamflow variability was related to a 35% loss in native fish species, on average, and a >50% loss of species with a preference for riffle habitats. Conditional probability analysis indicated that the probability of fish assemblage impairment increased as the severity of altered streamflow variability increased. Reservoir storage capacity and wastewater discharges were important predictors of reduced streamflow variability as revealed by random forest analysis. Management and conservation of streams will require careful consideration of natural streamflow variation and potential factors contributing to altered streamflow within the entire watershed to limit the loss of critical stream habitats and fish species uniquely adapted to live in those habitats.

River Research and Applications