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Simulation of flow and habitat conditions under ice, Cache la Poudre River - January 2006

The U.S. Forest Service authorizes the occupancy and use of Forest Service lands by various projects, including water storage facilities, under the Federal Land Policy and Management Act. Federal Land Policy and Management Act permits can be renewed at the end of their term. The U.S. Forest Service analyzes the environmental effects for the initial issuance or renewal of a permit and the terms and conditions (for example, mitigations plans) contained in the permit for the facilities. The U.S. Forest Service is preparing an environmental impact statement (EIS) to determine the conditions for the occupancy and use for Long Draw Reservoir on National Forest System administered lands. The scope of the EIS includes evaluating current operations and effects to fish habitat of an ongoing winter release of 0.283 m3 /s (10 ft3 /s) from headwater reservoirs as part of a previously issued permit. The field conditions observed during this study included this release. The U.S. Forest Service entered into an interagency agreement (05-IA-11021000-030) with the U.S. Geological Survey (USGS) Fort Collins Science Center to perform analysis of fish habitat and flow relationships in the Cache la Poudre River during winter ice-over conditions using a twodimensional hydrodynamic model. The U.S. Forest Service selected the Fort Collins Science Center for this task because of their expertise in developing two-dimensional hydraulic models for habitat modeling applications. This report transmits model results to the U.S. Forest Service to analyze the effects of alternative flow scenarios at a site on the mainstem Cache la Poudre River in Larimer County, Colorado, near Kinikinik (40° 42' 44.16" N. lat, 105° 44' 30.70" W. log), as shown in figure 1. It will be used in pending environmental analyses and decisions for the occupancy and use of the Arapaho-Roosevelt National Forest by water storage facilities. The water management scenarios of interest in this study are related to releasing water from Chambers and Barnes Meadows Reservoirs, based on the assumption that winter flow augmentation can increase potential fish habitat. Figure 2 shows the relationship between Chambers, Barnes Meadows, and Long Draw Reservoirs. At the time this study was proposed, existing flow simulation results showed that the channel constraints imposed by existing artificial low-head dikes would have little or no effect on the hydrodynamics of the river at the low flow levels that were to be evaluated. The Kinikinik study site contains deep pools, riffles, and runs. This diversity of habitat types made it ideal for assessing the effects of altered flow on fish habitat under ice in the main stem Cache la Poudre River. Thus, the Kinikinik site was selected for this study of winter habitat conditions. The preexisting topographic and hydrologic data collected at this site enabled data collection efforts for this study to focus on describing streamflow and ice cover during the winter months. A two-dimensional hydrodynamic model, River2D (Steffler and Blackburn, 2002), was used to simulate flow conditions under the ice cover that was observed January 24, 2006. The objectives of this study are (1) to describe the extent and thickness of ice cover, (2) simulate depth and velocity under ice at the study site for observed and reduced flows, and (3) to quantify fish habitat in this portion of the mainstem Cache la Poudre River for the current winter release schedule as well as for similar conditions without the 0.283 m 3 /s winter release.

Colorado

Assessment of conservation practices in the Fort Cobb Reservoir watershed, southwestern Oklahoma

The Fort Cobb Reservoir watershed encompasses about 813 square kilometers of rural farm land in Caddo, Custer, and Washita Counties in southwestern Oklahoma. The Fort Cobb Reservoir and six stream segments were identified on the Oklahoma 1998 303(d) list as not supporting designated beneficial uses because of impairment by nutrients, suspended solids, sedimentation, pesticides, and unknown toxicity. As a result, State and Federal agencies, in collaboration with conservation districts and landowners, started conservation efforts in 2001 to decrease erosion and transport of sediments and nutrients to the reservoir and improve water quality in tributaries. The U.S. Department of Agriculture selected the Fort Cobb Reservoir watershed in 2003 as 1 of 14 benchmark watersheds under the Conservation Effectiveness Assessment Project with the objective of quantifying the environmental benefits derived from agricultural conservation programs in reducing inflows of sediments and phosphorus to the reservoir. In November 2004, the Biologic, Geographic, Geologic, and Water Disciplines of the U.S. Geological Survey, in collaboration with the Agricultural Research Service, Grazinglands Research Laboratory in El Reno, Oklahoma, began an interdisciplinary investigation to produce an integrated publication to complement this program. This publication is a compilation of 10 report chapters describing land uses, soils, geology, climate, and water quality in streams and the reservoir through results of field and remote sensing investigations from 2004 to 2007. The investigations indicated that targeting best-management practices to small intermittent streams draining to the reservoir and to the Cobb Creek subwatershed may effectively augment efforts to improve eutrophic to hypereutrophic conditions that continue to affect the reservoir. The three major streams flowing into the reservoir contribute nutrients causing eutrophication, but minor streams draining cultivated fields near the reservoir appeared to be disproportionate contributors of nutrients. Increasing conservation practices on small streams may have a greater effect in mitigating eutrophication in the reservoir than additional installation of such measures on the larger creeks.

Oklahoma

Selenium in the upper Blackfoot River watershed, southeastern Idaho, 2001-12

The upper Blackfoot River in southeastern Idaho receives runoff from 12 large phosphate mines. Waste shales that are removed to access the phosphate ore are highly enriched with selenium, resulting in elevated selenium in runoff from the mine waste dumps. In 2001, in cooperation with the Bureau of Land Management, the U.S. Geological Survey (USGS) began monitoring streamflow, selenium, and other water-quality parameters at a single location near the outlet of the upper Blackfoot River to the Blackfoot Reservoir. Water samples primarily were collected by a flow triggered, automated pump sampler, supplemented by manual point and equal-width integrated manual samples. The approach to monitoring concentrations and streamflow over time at a fixed location is ideal for evaluating temporal trends, but provides no information about the relative source contributions from the mine waste dumps draining into various tributaries. In 2001, the Idaho Department of Environmental Quality (IDEQ) began an annual, mid-May, synoptic survey of selenium concentrations and streamflow at 21 locations along the main stem Blackfoot River and its tributaries. Individually, neither the intensive USGS sampling at the outlet nor the IDEQ annual synoptic sampling provides a comprehensive view of selenium runoff in the Blackfoot River watershed. Together, the efforts are complementary; therefore, in this report, results are presented from both sampling efforts. The USGS collected time-series data from 2001 to 2012 at a fixed location, the Blackfoot River near the outlet of the reservoir, near Henry, Idaho (USGS streamgage 13063000). Dissolved selenium concentrations from 450 filtered samples collected at this site ranged from 0.5 to 11.4 micrograms per liter (μg/L). The State of Idaho chronic aquatic life criterion concentration of 5 μg/L was exceeded in 31 percent of the samples, with most exceedances occurring during May of each year. No exceedances of the selenium criterion were recorded in months other than April, May, or June. Concentrations of selenium in unfiltered and filtered samples were similar, and concentrations from samples collected by depth and width integrated methods were similar to those collected by grab (point) samples, indicating that the grab samples adequately represent selenium concentrations across the entire river cross section. In speciation analyses made during 2003 and 2004, the median percentage of total selenium as selenate was 81 percent, ranging from 17 to 98 percent, and the median percentage of total selenium as selenite was 19 percent, ranging from 2 to 83 percent of the total selenium. During the period of study, selenium concentrations had an upward trend during the lowflow season of August–October. Time trends were not obvious during other seasons. Selenium daily loads varied by more than a factor of 900 during the study period and ranged from 0.03 kilograms per day (kg/d) to more than 24 kg/d. Annual maximum daily loads of selenium varied over nearly a factor of 12, ranging from about 2 to 24 kg/d. For the annual spring synoptic samples collected by the IDEQ along the main stem Blackfoot River and major tributaries, selenium concentrations ranged from less than 2 to 870 μg/L in 176 samples. In most years, the synoptic sampling showed that the majority of the selenium loads passing the USGS streamgage at the outlet of the watershed could be attributed to a single tributary, East Mill Creek, which enters the Blackfoot River through Spring Creek. Selenium loads decreased by about half from East Mill Creek before reaching the Blackfoot River, suggesting that much selenium is at least temporarily removed from the water column by uptake by aquatic vegetation or by losses to sediment. Similar decreases in selenium loads occurred through the main stem Blackfoot River before reaching the outlet in low flow years, but not in high flow years.

Idaho

Review of samples of water, sediment, tailings, and biota at the Little Bonanza mercury mine, San Luis Obispo County, California

Background and Objectives The Little Bonanza mercury (Hg) mine, located in San Luis Obispo County, California, is a relatively small mine with, a historical total Hg production of about 1,000 flasks. The mine workings and tailings are located in the headwaters of the previously unnamed west fork of Las Tablas Creek (WF Las Tablas Creek), which flows into the Nacimiento Reservoir. Wasterock and tailings eroded from the Little Bonanza Hg Mine have contributed Hg-enriched mine wastes to the headwaters of WF Las Tablas Creek. The mine is located on Federal land managed by the U.S. Bureau of Land Management (BLM), which requested that the U.S. Geological Survey (USGS) measure and characterize Hg and other geochemical constituents in tailings, sediment, water, and biota at and downstream from the minesite. This report is in response that request, from the lead agency which is mandated to conduct a Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) - Removal Site Investigation (RSI). The RSI applies to removal of Hg-contaminated mine waste from the Little Bonanza minesite as a means of reducing Hg transport to WF Las Tablas Creek. This report summarizes data obtained from field sampling of mine tailings, wasterock, sediment, water, and biota at the Little Bonanza Mine that was completed on April 6, 2010. Conditions during sampling were dry and no rain had occurred in the watershed for several weeks. Our results permit a preliminary assessment of the mining sources of Hg and associated chemical constituents that could produce elevated levels of monomethyl mercury (MMeHg) in WF Las Tablas Creek and in biota. History and Geology The history of the Little Bonanza Hg mine is summarized here from Yates (1943) and other references as cited. The Little Bonanza Mine, located 20 mi west of Paso Robles, was discovered in 1862. Although production was minor until 1900, from 1900 to 1906, the mine produced about 1,000 flasks of Hg. Intermittent production continued into the 1940s but was relatively limited. Underground workings, now caved and inaccessible, include about 3,000 ft of drifts, crosscuts, and raises on three levels extending 260 ft downward. The workings at the Little Bonanza Mine explore a zone of fault breccia, which trends northwest. The breccia is composed of fragments of sandstone, greenstone, serpentine, and chert in a shale matrix. The serpentine has been hydrothermally altered to silica-carbonate rock, and the Hg deposit is hosted within the zone of alteration. The veins are discontinuous and irregular, but form a steplike pattern along the fault zone. The principal mineralization occurring in the veins is irregular, consisting of disseminated zones of cinnabar. Most of the veins in the mine area contain cinnabar. Sample Sites and Methods Samples were collected to assess the concentrations of Hg and biogeochemically relevant constituents in tailings and wasterock piles at the Little Bonanza Hg mine. Tailings are present adjacent to a three-pipe retort used to process the Hg ore. The tailings occur in the upper 15 cm of the soil adjacent to the retort and slag from the retort is present on the surface. An area of disturbed soil and rock uphill from the retort was likely formed during construction of a dam that provided water for mining activities. Wasterock in these piles was sampled. The largest amount of tailings is exposed to the west of the retort in the bank of WF Las Tablas Creek. Water, sediment, and biota were sampled from WF Las Tablas Creek, which flows through the mine area. Sample-site locations are shown in figures 10 and 11 and listed in table 1. Samples were collected when streamflow was low and no precipitation had occurred.

California

Managed aquifer recharge in snow-fed river basins: What, why and how?

What does climate change mean for snow-fed river basins? Climate change poses unique challenges in snow-fed river basins across the western United States because the majority of water supply originates as snow (Dettinger, Udall, & Georgakakos, 2015). In the Sierra Nevada, recent observations include changes in snow accumulation and snowmelt, and shifts in peak streamflow timing (Barnhart et al., 2016; Hatchett et al., 2017; Kim & Jain, 2010; McCabe, Wolock, & Valentin, 2018; Mote, Li, Lettenmaier, Xiao, & Engel, 2018). Such changes upstream alter surface water deliveries downstream, as well as groundwater recharge utilized as both primary and supplemental water supply (Godsey et al., 2014; Harpold, 2016; Jasechko et al., 2014). basin where snowmelt runoff produces substantial water supply to meet diverse agricultural, environmental and urban water demand (Figure 1). The East and West Forks join at the confluence of the Carson River near the north end of the Carson Valley, a rich agricultural region (40,000 acres) that grows primarily alfalfa hay. The majority of irrigators rely on surface water delivered through a network of earthen ditches constructed in the mid-19th and early 20th centuries. Flow through these earthen networks and the practice of flood irrigation contribute significantly to groundwater recharge. Because no upstream surface water reservoirs exist, snowpack that accumulates through winter and melts slowly through spring has acted as a “natural” reservoir, providing ample supply through the summer irrigati agricultural, environmental and urban water demand (Figure 1). The East and West Forks join at the confluence of the Carson River near the north end of the season. Some irrigators have permitted access to supplemental groundwater that is useful during periods of drought for augmenting shortfalls in surface water delivery. Groundwater is the primary source of municipal and industrial water supply for surrounding communities (e.g., Carson City, Minden, Gardnerville, Dayton). Across the basin, water use is highly regulated through federal, tribal, state and local water-sharing agreements based on prior appropriation doctrine (Wilds, 2014). Carson River surface water allocations follow the Alpine Decree, initiated by the United States Department of Interior in 1925 and signed into law in 1980, following 55 years of litigation, to adjudicate surface water rights to individual parties (NDWP, 1999). The Alpine Decree acknowledges return flows to lower river segments, and thus each river segment is distributed autonomously. This means that the most junior water right on an upper segment can be fulfilled before considering the most senior water right on a lower segment. Ultimately, the ruling is at the discretion of the Federal Water Master to satisfy the needs of each water right Downstream of Carson Valley, surface water flows are stored in Lahontan Reservoir, the nation’s first desert reclamation project (est. 1906), where releases are managed to meet the Newland’s Project irrigation water demand and for environmental use on the Stillwater National Wildlife Refuge. Flows from the Carson River are supplemented through diversions from the Truckee River via the Truckee Canal, resulting in a trans-basin water supply system. How is the Water for the Seasons research program informing snow-fed river basin communities? In the Truckee-Carson River System, researchers and local water managers are working together to assess climate change impacts to water supply and explore how model simulations can produce useful information to support local climate adaptation. Twelve key water managers represent agricultural, environmental, urban and regulatory water-use communities, and bring to the table diverse input and perspectives on how to adapt to climate change. Hydrologists use this input to craft scenarios and simulations that meet the information needs of local water managers. Biannual workshops provide an opportunity for information exchange, where researchers and key water managers generate new knowledge of river system function. That is, researchers share results of models that examine the physical potential, and managers validate the on-the-ground potential, further informing the research process. Coincident to this research program, the region faced a prolonged drought period (2012-2016) with historically low snowpack, followed by a historic wet year (2017) that brought winter and spring flooding as a result of atmospheric river storm events (Sterle et al., 2019). For the Carson River, an important observation made by managers was that peak streamflow that had traditionally coincided with peak irrigation demands, had shifted to earlier in the spring, with summer baseflow also decreasing (Sterle & Singletary, 2017). Managers shared with researchers concerns over potential future impacts that changing snowpack will have on surface water deliveries and reliance on groundwater, as the region’s population and economy continue to grow. During workshops that occurred over this period, local water managers and researchers discussed ways to evaluate water distribution and use that honors the existing legal framework and accounts for changing snowpack regimes (amount, rain versus snow, timing). In response to managers growing interest, researchers introduced the concept of managed aquifer recharge as one potential strategy to adapt and enhance regional water sustainability. What is managed aquifer recharge? Simply stated, managed aquifer recharge is the intentional recharge of structures to spread water over agricultural lands, allowing water to naturally infiltrate into the groundwater system (Bouwer, 1999; Niswonger et al., 2017). The latter may occur during the irrigation season by applying excess water, or during the nonirrigation season when evapotranspiration losses are low. Figure 2 illustrates managed aquifer recharge in a snow-fed river basin, where streamflow generated from snowmelt runoff is diverted to agricultural lands to recharge the aquifer. Such flood irrigation practices, including water delivery through earthen ditch networks, provide incidental but significant aquifer recharge through seepage and deep drainage beneath fields (Niswonger, Allander, & Jeton, 2014). The effects of managed aquifer recharge can vary depending on the location and intensity of practice. For example, implementing managed aquifer recharge water into the groundwater system (Dillon, 2009). This differs from the incidental recharge that may occur as part of normal irrigation practices. Managed recharge may occur by injection into the aquifer through existingwells, or by using existing conveyance adjacent to/along the river’s floodplain has the potential to enhance late-season instream flows due to increased return flows, resulting in greater downstream deliveries as well as improving ecological conditions (Niswonger et al., 2017). Implementing managed aquifer recharge away from the river’s floodplain has the potential to enhance groundwater supply which is increasingly relied upon during surface water shortage (Green et al., 2011), by storing water in available aquifer space in the deep aquifer. At the basin scale, managed aquifer recharge may lead to regional groundwater sustainability. Is the Carson River Basin a candidate for managed aquifer recharge? The physical limitations to implementing managed aquifer recharge in the Carson River Basin hinges on three key factors. The first factor relates to the physical connectivity between rivers and streams, and the irrigation delivery network of canals and ditches that divert water to agricultural lands (Niswonger et al., 2017). In the Carson River Basin the mechanisms for getting water to fields is already in place. Thus, intentionally routing high flows that occur in wet years through this system during the nonirrigation season would mimic what occurs naturally during the irrigation season. The second factor relates to the occurrence of atmospheric river storm events that deliver large amounts of precipitation to the region, much greater than average (Dettinger et al., 2015). With increased frequency and intensity projected under a warmer climate, such events have the potential to produce excess water over short periods of time that could be stored through mechanisms such as managed aquifer recharge (Niswonger et al., 2017). The third factor relates to the change in snowpack accumulation and shifts in snowmelt timing observed elsewhere in the Sierra Nevada (e.g., Godsey et al., 2014; Mote et al., 2018). Having a mechanism in place to maximize use of earlier snowmelt and shifts in streamflow timing could be advantageous and enhance regional groundwater sustainability. As part of the Water for the Seasons study, a hypothetical scenario was developed to determine the feasibility of managed aquifer recharge in the Carson River Basin, assuming no legal constraints. During “wet” or above-average water years, irrigators in the Upper Carson Valley would divert high flows and spread water over agricultural lands during the nonirrigation season. Assuming flows are abundant and “early,” diversions would begin prior to the growing season, when water would otherwise flow downstream to the Lahontan Reservoir. During “dry” years or drought periods, when surface water availability is less, irrigators in the Upper Carson Valley could augment surface water shortages with groundwater, allowing available surface water flows to flow downstream. Researchers hypothesize the amount of water has the potential to boost baseflow to support environmental instream flows, for example. What concerns have local water managers expressed? The hypothetical managed aquifer recharge scenario was presented to water managers in a workshop setting. Presentations included an overview of the hydrologic and operations modeling tools used to evaluate managed aquifer recharge by simulating the timing and distribution of water in the upper watershed. Specifically, in the Upper Carson Valley, a hydrologic model (GSFLOW) simulates streamflow driven by snowmelt, and surface and groundwater interactions, while a river basin operations model (MODSIM) allocates water according to the prior appropriation doctrine in the basin (see Figure 1) (Morway, Niswonger, & Triana, 2016; Niswonger et al., 2017). Integrating these two modeling tools advances the evaluation of climate impacts on water availability in agricultural communities and the resulting impacts of alternative management strategies (Morway et al., 2016). When asked about the viability of managed aquifer recharge, the perspectives of 11 managers varied (Figure 3). Regardless of rating, all managers questioned, “How would thisreally work?” Several managers questioned whether models could simulate the connectivity between surface and groundwater to accurately quantify changes to instream flow. Others raised concerns that managed aquifer recharge violates the Alpine Decree and Nevada Water Law. Still others requested researchers consider alternatives that could work within the confines of current (2019) water law. Managers posed specific questions that should be considered when evaluating the potential for managed aquifer recharge. For example: What triggers implementation of managed aquifer recharge?How “high” or “low” must annual flows be to initiate managed aquifer recharge? When in the water year is this determined? Where exactly in the Carson Valley is managed aquiferre charge possible? For example, what areas away from the floodplain could ensure long-term storage? Can model simulations quantify potential benefits and consequences system-wide?Would this information support decision-making, such as permitting of additional supplemental groundwater rights? How are researchers going to address managers’ research questions? Managers’ perspectives help to validate the on-the-ground potential of particular strategies and further refine alternative management scenarios. For example, understanding that managers are concerned with oversaturated fields helps researchers to define conditions in the model, such as what defines a wet versus “too” wet type of year and where to focus irrigation for managed aquifer recharge. Incorporating these nuances provides more accurate quantification of the potential benefits and consequences for users across the basin. Modeling is underway to simulate managed aquifer recharge scenarios and explore basin-wide implications. Researchers and local water managers will convene to collaboratively review results and further assess whether this or other strategies could work under the confines of existing water law. Subsequent fact sheets will present these findings.

Nevada

Chemistry and age of groundwater in the Piceance structural basin, Rio Blanco County, Colorado, 2010-12

Fourteen monitoring wells were sampled by the U.S. Geological Survey, in cooperation with the Bureau of Land Management, to better understand the chemistry and age of groundwater in the Piceance structural basin in Rio Blanco County, Colorado, and how they may relate to the development of underlying natural-gas reservoirs. Natural gas extraction in the area has been ongoing since at least the 1950s, and the area contains about 960 producing, shut-in, and abandoned natural-gas wells.

Colorado

Functional age as an indicator of reservoir senescence

It has been conjectured that reservoirs differ in the rate at which they manifest senescence, but no attempt has been made to find an indicator of senescence that performs better than chronological age. We assembled an indicator of functional age by creating a multimetric scale consisting of 10 metrics descriptive of reservoir environments that were expected to change directionally with reservoir senescence. In a sample of 1,022 U.S. reservoirs, chronological age was not correlated with functional age. Functional age was directly related to percentage of cultivated land in the catchment and inversely related to reservoir depth. Moreover, aspects of reservoir fishing quality and fish population characteristics were related to functional age. A multimetric scale to indicate reservoir functional age presents the possibility for management intervention from multiple angles. If a reservoir is functionally aging at an accelerated rate, action may be taken to remedy the conditions contributing most to functional age. Intervention to reduce scores of selected metrics in the scale can potentially reduce the rate of senescence and increase the life expectancy of the reservoir. This leads to the intriguing implication that steps can be taken to reduce functional age and actually make the reservoir grow younger.

Fisheries

USGS investigations of water produced during hydrocarbon reservoir development

Significant quantities of water are present in hydrocarbon reservoirs. When brought to the land surface during oil, gas, and coalbed methane production, the water—either naturally occurring or injected as a method to enhance production—is termed produced water. Produced water is currently managed through processes such as recycling, treatment and discharge, spreading on roads, evaporation or infiltration, and deep well injection. U.S. Geological Survey (USGS) scientists conduct research and publish data related to produced water, thus providing information and insight to scientists, decisionmakers, the energy industry, and the public. The information advances scientific knowledge, informs resource management decisions, and facilitates environmental protection. This fact sheet discusses integrated research being conducted by USGS scientists supported by programs in the Energy and Minerals and Environmental Health Mission Areas. The research products help inform decisions pertaining to understanding the nature and management of produced water in the United States.

Fact Sheet

Assessing potential effects of changes in water use in the middle Carson River Basin with a numerical groundwater-flow model, Eagle, Dayton, and Churchill Valleys, west-central Nevada

During the economic boom of the mid part of the first decade of the 2000s in northwestern Nevada, municipal and housing growth increased use of the water resources of this semi-arid region. In 2008, when the economy slowed, new housing development stopped, and immediate pressure on groundwater resources abated. The U.S. Geological Survey, in cooperation with the Bureau of Reclamation, began a hydrogeologic study of the middle Carson River Basin. The first half of the study reviewed and synthesized previous geologic studies and contributed new datasets that served as a foundation for a three-dimensional, transient numerical model of groundwater and surface-water flow for the middle Carson River Basin extending from Eagle Valley to Churchill Valley. The model can be used to evaluate the effects of proposed alternative management strategies on groundwater sustainability, flows in the Carson River, and routine operation of Lahontan Reservoir and can also provide a basis for basin-wide investigations seeking to quantitatively evaluate the effects of climate change or yet-to-be-determined alternative management strategies. The middle Carson model was constructed using the U.S. Geological Survey groundwater modeling software MODFLOW-NWT. MODFLOW is widely used groundwater modeling software and is well-suited for evaluating groundwater and surface-water interactions. The model uses 550-feet square grid cells that align with the previously published model for Carson Valley (adjacent upstream valley). Six grid layers with more finely resolved vertical resolution near the perimeter of the active model domain and near surface-water features, compared to other areas of the active model domain, hone the simulated groundwater and surface-water exchanges. In addition to simulating groundwater and surface-water interaction, crop and phreatophyte evapotranspiration, lake evaporation, mountain-front recharge, recharge from irrigation return flows, and groundwater pumping are also simulated. Surface-water flow entering the model domain, including the Carson River, tributary inflow from perennial streams in Eagle Valley, and trans-basin imports through the Truckee Canal (surface water diverted from the Truckee River) are specified according to U.S. Geological Survey streamgage records. Groundwater pumpage and surface-water diversions to 10 agricultural ditches and the managed release from Lahontan Reservoir, at the end of the middle Carson River Basin, are specified according to water-manager records. The model simulation period extended from 2000 through 2010 (January 1, 2000, to December 31, 2010) using 574 weekly stress periods, with a single steady-state stress period at the beginning of the simulation that establishes initial conditions by approximating average conditions during the transient simulation period. All available observations for this period were used during the model calibration process, performed using automated parameter-estimation software. Calibration targets included observations of groundwater elevations in wells, streamflow, differences in observed streamflow between successive streamgages and actual evapotranspiration from irrigated lands. Among all 5,296 simulated and observed groundwater level pairs, the mean error was 1.42 feet; the mean absolute error, 7.71 feet; and the percent bias was −0.1 percent. Three alternative management scenarios, run using the entire period of analysis (2000–10), were simulated to improve understanding of the potential effects of (1) loss of irrigated agricultural lands following conversion of water-rights to municipal groundwater rights; (2) reclaiming treated wastewater with induction wells; and (3) exercising permitted but under-utilized groundwater rights. Scenarios 2 and 3 were further explored using two and four subscenarios, respectively. Simulated scenario results ranged from having little effect on the groundwater system relative to a baseline simulation to having spatially extensive and large groundwater-level declines (10 to 20 feet) compared to the baseline simulation. None of the simulated scenarios increased delivery of river flows to Lahontan Reservoir. On the contrary, one of the subscenarios under alternative management scenario 3 led to surface-water delivery shortfalls of more than 10,000 acre-feet per year. Future model improvements may include an extension of the model simulation period backward and forward in time and directly linking it to the upstream Carson Valley groundwater model. Furthermore, converting this MODFLOW model to a GSFLOW model, which fully integrates groundwater and surface-water flows including precipitation runoff and infiltration, may provide an improved tool for comprehensive management of water-resources in the middle Carson River Basin.

Nevada

Status and conservation of interior Redband Trout in the western United States

In this article we describe the current status and conservation of interior (potamodromous) Redband Trout Oncorhynchus mykiss sspp. throughout its range in the western United States using extant data and expert opinion provided by fish managers. Redband Trout historically occupied 60,295 km of stream habitat and 152 natural lakes. Currently, Redband Trout occupy 25,417 km of stream habitat (42% of their historical range) and 124 lakes or reservoirs. Nonhybridized populations are assumed to occupy 11,695 km (46%) of currently occupied streams; however, fish from only 4,473 km (18%) have been genetically tested. Approximately 47% of the streams occupied by Redband Trout occur on private land, 45% on government lands, and 8% in protected areas. A total of 210 Redband Trout populations, occupying 15,252 km of stream habitat (60% of the current distribution) and 95,158 ha of lake habitat (52%), are being managed as “conservation populations.” Most conservation populations have been designated as weakly to strongly connected metapopulations (125; 60%) and occupy much more stream length (14,112 km; 93%) than isolated conservation populations (1,141 km; 7%). The primary threats to Redband Trout include invasive species, habitat degradation and fragmentation, and climate change. Although the historical distribution of interior Redband Trout has declined dramatically, we conclude that the species is not currently at imminent risk of extinction because it is still widely distributed with many populations isolated by physical barriers and active conservation efforts are occurring for many populations. However, the hybridization status of many populations has not been well quantified, and introgression may be more prevalent than documented here. We recommend (1) collecting additional genetic data and estimating distribution and abundance by means of a more rigorous spatial sampling design to reduce uncertainties, (2) collecting additional information to assess and predict the impacts of climate on populations, and (3) continuing to use this database to evaluate the status of Redband Trout and inform conservation efforts through time.

North American Journal of Fisheries Management

One-Water Hydrologic Flow Model: A MODFLOW based conjunctive-use simulation software

The U.S. Geological Survey’s (USGS) Modular Ground-Water Flow Model (MODFLOW-2005) is a computer program that simulates groundwater flow by using finite differences. The MODFLOW-2005 framework uses a modular design that allows for the easy development and incorporation of new features called processes and packages that work with or modify inputs to the groundwater-flow equation. A process solves a flow equation or set of equations. For example, the central part of MODFLOW is the groundwater-flow process that solves the groundwater-flow equation; the surface-water routing process is an additional process that solves the surface-water flow equation. Packages are code related to the groundwater-flow process. For example, the subsidence package modifies the groundwater-flow process by including aquifer compaction effects on flow. With the development of new packages and processes, the MODFLOW-2005 base framework diverged into multiple independent versions designed for specific simulation needs. This divergence limited each independent MODFLOW release to its specific purpose, so that there was no longer a single, comprehensive, general-purpose hydraulic-simulation framework. The MODFLOW One-Water Hydrologic Flow Model (MF-OWHM, also informally known as OneWater) is an integrated hydrologic flow model that combines multiple MODFLOW-2005 variants in one cohesive simulation software; changes were made to enable multiple capabilities in one code. This fusion of the MODFLOW-2005 versions resulted in a simulation software that can be used to address and analyze a wide class of conjunctive-use, water-management, water-food-security, and climate-crop-water scenarios. As a second core version of MODFLOW-2005, MF-OWHM maintains backward compatibility with existing MODFLOW-2005 versions, with features that include the following: Process-based simulation. Saturated groundwater flow (three-dimensional). Surface-water flow (one- and two-dimensional). Stream and river flow. Lake and reservoir storage. Landscape simulation and irrigated agriculture. Land-use and crop simulation. Root uptake of groundwater. Actual evapotranspiration. Estimated irrigation demand. Reservoir operations. Aquifer compaction and subsidence by vertical model-grid deformation. Seawater intrusion by a sharp-interface assumption. Karst-aquifer and fractured-bedrock flow. Turbulent and laminar-pipe network flow. Unsaturated groundwater flow (one-dimensional). Internal linkages among the processes that couple hydraulic head, flow, and deformation. Redesigned code for faster simulation, increased user-input options, easier model updates, and more robust error reporting than in previous models. MF-OWHM is a MODFLOW-2005 based integrated hydrologic model that can simulate and analyze varying environmental conditions to allow for the evaluation of management options from many components of human and natural water movement through a physically based, supply and demand framework. The term “integrated,” in the context of this report, refers to the tight coupling of groundwater flow, surface-water flow, landscape processes, aquifer compaction and subsidence, reservoir operations, and conduit (karst) flow. Another benefit of this integrated hydrologic model is that models developed to run by MODFLOW-2005, MODFLOW-NWT, MODFLOW-CFP, or MODFLOW-FMP can also be simulated with MF-OWHM. At the time of this report’s publication, MF-OWHM version 2 (MF-OWHM2) does not include a direct internal simulation of snowmelt, advanced mountainous watershed rainfall-runoff simulation, detailed shallow soil-moisture accounting, or atmospheric moisture content. Atmospheric moisture may be accounted for indirectly by, optionally, specifying a pan-evaporation rate, reference evapotranspiration, and precipitation. These features are not included to ensure that simulation runtime remains short enough to enable the use of automated methods of calibrating model parameters to field observations, which typically require many simulation model runs. The MF-OWHM approach is to include as much detail as possible to simulate hydrological processes, providing the simulation runtimes remain reasonable enough to allow for robust parameter estimation and model calibration. To represent both natural and human-influenced flow, MF-OWHM integrates physically based flow processes derived from MODFLOW-2005 in a supply and demand framework. From this integration, the physically based movement of groundwater, surface water, imported water, and precipitation serve as supply to meet consumptive demands associated with irrigated and non-irrigated agriculture, natural vegetation, and urban water uses. Water consumption is determined by balancing the available water supply with water demand, leading to the concept of a demand-driven, supply-constrained simulation. The MF-OWHM Supply-and-Demand Framework is especially useful for the analysis of agricultural water use, where there are often few data available to describe changes in land-use through time, such as crop type and distribution, and the associated changes in groundwater pumpage. This framework attempts to satisfy each land-use water demand with available water supplies—that is, groundwater uptake, precipitation, and irrigation. An option provided in MF-OWHM2 is to automatically increase groundwater pumping for irrigation, which often is unknown, by the calculated residual between demand and the other available sources of supply. From large- to small-scale applications, the physically based supply and demand framework provides key capabilities for simulating and analyzing historical, current, and future conjunctive-use of surface water and groundwater. To achieve the physically based supply and demand framework, the MODFLOW-2005 standard of no inter-package and -process communication was relaxed for MF-OWHM2. Traditional MODFLOW simulation models required that all packages and processes interact through the groundwater-flow equation or by removing the water flow from the simulation domain. For example, the MODFLOW-2005 representation of a groundwater well extracts water from the groundwater-flow equation (by subtraction) and removes it from the simulation domain. This feature is available in the MF-OWHM framework, but options have been added to allow the specification of a use or destination of pumped groundwater within the model domain, for example, it can be used for irrigation, managed aquifer recharge, or return-flow to streams.

Techniques and Methods

Carbon dioxide mineralization feasibility in the United States

Geologic carbon dioxide (CO 2 ) storage is one of many methods for stabilizing the increasing concentration of CO 2 in the Earth’s atmosphere. The injection of CO 2 in deep subsurface sedimentary reservoirs is the most commonly discussed method; however, the potential for CO 2 leakage can create long-term stability concerns. This report discusses the feasibility of an alternative form of geologic CO 2 storage: CO 2 mineralization. In this method, CO 2 reacts with rocks and minerals to form solid and stable carbonate rocks. New pilot projects and laboratory-based kinetics experiments have revealed that this method, both in situ and ex situ, may be a viable option for storage. In situ storage targets in-place rocks at the surface or subsurface. Ex situ storage targets industrial byproducts at the surface like mine tailings. Environmental risks include induced seismicity for in situ methods if pressure is not managed properly, as well as potential water and land use effects. However, there are fewer long-term CO 2 -leakage concerns for mineralization methods compared to saline storage methods and therefore potentially lower long-term monitoring costs. The costs and benefits of CO 2 mineralization are compared to those of CO 2 storage in saline reservoirs using estimates of pressure-limited dynamic storage capacity. This report highlights the regional potential of areas in the United States for in situ and ex situ storage, as well as their proximity to potential sources of CO 2 . Especially suitable targets include asbestos or other ultramafic mine tailings, in situ ultramafic rocks on the East and West Coasts, the Columbia River basalts in the Pacific Northwest, the Midcontinent Rift basalts in the midcontinent, and the basaltic Hawaiian Islands.

Scientific Investigations Report

Bathymetry and capacity of Blackfoot Reservoir, Caribou County, Idaho, 2011

The U.S. Geological Survey (USGS), in cooperation with the Shoshone-Bannock Tribes, surveyed the bathymetry and selected above-water sections of Blackfoot Reservoir, Caribou County, Idaho, in 2011. Reservoir operators manage releases from Government Dam on Blackfoot Reservoir based on a stage-capacity relation developed about the time of dam construction in the early 1900s. Reservoir operation directly affects the amount of water that is available for irrigation of agricultural land on the Fort Hall Indian Reservation and surrounding areas. The USGS surveyed the below-water sections of the reservoir using a multibeam echosounder and real-time kinematic global positioning system (RTK-GPS) equipment at full reservoir pool in June 2011, covering elevations from 6,090 to 6,119 feet (ft) above the North American Vertical Datum of 1988 (NAVD 88). The USGS used data from a light detection and ranging (LiDAR) survey performed in 2000 to map reservoir bathymetry from 6,116 to 6,124 ft NAVD 88, which were mostly in depths too shallow to measure with the multibeam echosounder, and most of the above-water section of the reservoir (above 6,124 ft NAVD 88). Selected points and bank erosional features were surveyed by the USGS using RTK-GPS and a total station at low reservoir pool in September 2011 to supplement and verify the LiDAR data. The stage-capacity relation was revised and presented in a tabular format. The datasets show a 2.0-percent decrease in capacity from the original survey, due to sedimentation or differences in accuracy between surveys. A 1.3-percent error also was detected in the previously used capacity table and measured water-level elevation because of questionable reference elevation at monitoring stations near Government Dam. Reservoir capacity in 2011 at design maximum pool of 6,124 ft above NAVD 88 was 333,500 acre-ft.

Idaho

Land-Cover Trends of the Sierra Nevada Ecoregion, 1973-2000

The U.S. Geological Survey has developed and is implementing the Land Cover Trends project to estimate and describe the temporal and spatial distribution and variability of contemporary land-use and land-cover change in the United States. As part of the Land Cover Trends project, the purpose of this study was to assess land-use/land-cover change in the Sierra Nevada ecoregion for the period 1973 to 2000 using a probability sampling technique and satellite imagery. We randomly selected 36 100-km2 sample blocks to derive thematic images of land-use/land-cover for five dates of Landsat imagery (1973, 1980, 1986, 1992, 2000). We visually interpreted as many as 11 land-use/land-cover classes using a 60-meter minimum mapping unit from the five dates of imagery yielding four periods for analysis. Change-detection results from post-classification comparison of our mapped data showed that landscape disturbance from fire was the dominant change from 1973-2000. The second most-common change was forest disturbance resulting from harvest of timber resources by way of clear-cutting. The rates of forest regeneration from temporary fire and harvest disturbances coincided with the rates of disturbance from the previous period. Relatively minor landscape changes were caused by new development and reservoir drawdown. Multiple linear regression analysis suggests that land ownership and the proportion of forest and developed cover types were significant determinants of the likelihood of direct human-induced change occurring in sampling units. Driving forces of change include land ownership, land management such as fire suppression policy, and demand for natural resources.

Scientific Investigations Report

Are we running out of water?

Water supplies are not running out, but time is getting short to stem waste of water and destructive exploitation of the environment before harm is done that may be irreparable. Most of the world's water is oceanic brine. Of the waters on the land, most is frozen in Antarctica and Greenland. Only a small part of continental water is available for use and management. The discharge of rivers to the sea is a close measure of the availability of liquid water, but ground-water reservoirs have important functions as inexpensive equalizers of water supply. Soil moisture is a major factor in the water economy, and its function usually is overlooked in assessments of water use and future water demand. Despite outcries of water shortage, the principal use of water in advanced countries is as a medium for waste disposal. In reality, despite regional maldistribution of water, United States supplies are adequate, given rational management. Also, contrary to common belief, water pollution is primarily a problem of economics, not of health. A paramount problem in most parts of the world is the shortage of water development and management facilities, not a shortage of water. The International Hydrological Decade is a program to awaken people everywhere to the crucial importance of water in man's future and to promote rational approach to water problems.

Circular

Summary appraisals of the nation's ground-water resources – California region

Most people in the California Region live in a semiarid or arid climate, with precipitation less than the potential evapotranspiration- environments of perennial water deficiency. The deficiency becomes most onerous during the characteristically rainless summers and during recurrent droughts that may continue for 10--20 years. However, water from winter rain and snow can be stored for use during the dry summer months, and water stored during a wet climatic period can be used in a succeeding dry period; moreover, perennial deficiency can be overcome by bringing water from areas of perennial surplus. Ground-water reservoirs have especial significance in arid and semiarid regions as repositories where water is stored or can be stored with minimum loss by evaporation. Nearly all the ground-water reservoirs of the California Region are in alluvial sediments of valleys and plains that flank the mountain ranges. The largest, underlying the vast Central Valley, occupies 10 percent of the area of the region, has an estimated usable capacity exceeding 100 million acre-feet (125 cubic kilometres), and has an annual pumpage from wells of about 13 million acre-feet (16 cubic kilometres). Another 10 percent of the region is occupied by 55 developed ground-water reservoirs that are widely distributed; aggregate annual pumpage from them is about 3 1/2 million acre-feet (4 cubic kilometres). In the southeastern desert about 60 ground-water reservoirs occupy still another 10 percent of the region; these have been explored only enough to show that most have some usable water, but current use is negligible. In northeastern California and adjacent Oregon and Nevada, ground-water reservoirs are identified only in valleys and lowlands where wells are feasible, but basaltic rocks of the Cascade Range and Modoc Plateau are excellent aquifers distributed over an area constituting about 15 percent of the region. In sum, slightly less than half the California Region is underlain by ground-water reservoirs, either in valley fill or in volcanic rocks, which can yield significant quantities of water to wells. The rest of the California Region includes the mountains, canyons, slopes, and foothills of the Sierra Nevada, Coast Ranges, and Basin Ranges, whose consolidated rocks and products of their weathering may be permeable locally but are not generally so. Here, the prevailing method of ground-water development is still mostly trial and error, and while in many places a well can yield enough water for a family, some families might have to do without amenities such as flush toilets and automatic washers. For more than half a century the California Region has led all others in North America in pumping of ground water as well as in the area, variety, yield, and export of crops irrigated by water from wells. It has led in the development and use of deep-well turbine pumps for large yield and in the drilling of water wells to great depths. At the same time, such developments have resulted in the elimination of artesian pressures that produced thousands of flowing wells in the 19th century and led to the wide distribution of "falling water tables." Also, California was first to induce encroachment of seawater into wells (in 1906); first to recognize subsidence of land caused by pumping from wells (in 1933), generating news about land sinking in San Jose, Long Beach, and along the Delta-Mendota and Friant-Kern Canals; and first to experience pollution of ground-water reservoirs by brines, chemicals, industrial wastes, and petroleum byproducts including gasoline. The region has led in research in several fields leading to solution of many of these problems. Ground-water problems developed rapidly after World War II with booming population, agriculture, industry, and water demand during several years of regionwide drought. Water levels in wells trended downward almost everywhere as a natural effect of the drought and at accelerated rates in areas of pumping for new enterprises or to supplement subnormal surface-water supplies. The declines in many pumping areas exceeded 100 feet (30 metres), and in some confined aquifers the potentiometric surface was drawn down more than 330 feet (100 metres). The depletion of ground-water storage has had "permanent" side effects, including subsidence of the land exceeding 10 feet (3 metres) in extensive areas, and seawater intrusion that ended the useful lives of many wells along the coast and as much as 6 miles (10 kilometres) inland. Some problems have been solved, but these solutions have at times created other problems. Many ground-water reservoirs have gone through one or more stages - exploration for productive aquifers, exploitation and development for use of the water, restriction to the perennial supply or "safe" yield, importation of surface water, artificial recharge of ground water, conjunctive use of surface and ground water, protection of water quality, and integrated management of use and disposal of water. This evolutionary sequence is unique for each reservoir, and so generalizations become difficult in a regional appraisal; also, the changes with time are significant and varied, and knowledge of prior events is a prerequisite in an appraisal of the resource in a specific year. As of 1970, water levels in many wells had risen significantly from the minimum levels of record reached during the 1960's or earlier; only in areas of new development and in desert areas of long-continued "mining" of nonreplenished water was ground-water storage still being depleted. Land subsidence has continued at diminishing rates and practically has come to a halt in some areas; invading seawater has been stopped or nudged back in most places where problems were significant. The current, favorable situation has been helped by climatic variations, from drought in 1945-52 and exceedingly dry years in 1959 and 1961 to above-normal precipitation in 1969 and 1970; but most of the serious problems have been solved by human efforts, including especially the implementation of the California Water Plan, transporting water from areas of perennial surplus to areas where it is used in lieu of ground water or for ground-water replenishment. All major urban areas now import water to supplement or replace the water pumped from wells. Extensive agricultural areas that formerly were irrigated solely by ground water now obtain some of their water from surface reservoirs and canals, especially in the Central Valley. With surface water available as an alternative supply, well owners can view their ground water with complacency. But complacency can lead to neglect and carelessness and consequent deterioration of the ground-water resource by pollution. Claiming heritage from the English Common Law, the existing California law grants to the landowner (riparian) and private enterprise (appropriator) rights to the water stored in ground-water reservoirs or discharged from them, including the base flow of streams. Ground-water development has been by private and local enterprise, and the California legislature has protected and encouraged local responsibility, control, and management of ground water. As to surface water, a constitutional amendment in 1928 limited riparian rights to the quantities of water that were "reasonably required for the beneficial use to be served." The surpluses have become public waters which are collected, stored, transported, and delivered under various contracts by Federal, State, and other agencies. The agencies have not stored water underground because of uncertainty as to their rights, but some local agencies have been encouraged with favorable pricing schedules to undertake the artificial recharge and management of ground-water reservoirs. Thus, conjunctive use of surface and ground water has become a matter of interagency negotiation. Of all the constraints on effective use of ground-water reservoirs, the most formidable may be the attitudes of people. Assurance of water supply is vital in areas of water deficiency, and Government has assumed increasing responsibility for the welfare of people in these areas. Unfortunately, when Government provides this assurance, most beneficiaries demand continued subsidy to the exclusion of perhaps cheaper private development. Indeed, as the water resources are presently segregated-with private rights predominant in ground water and public interest dominant in surface water-ground-water development has suffered for lack of public concern. The region has the scientific and technologic capability for effective use of groundwater reservoirs, as shown by the achievements and programs of several districts, but many districts are not organized or staffed for such comprehensive management and will need assistance and scientific expertise available from State and Federal agencies. Those agencies, in turn, may not have the scientific data that are essential to prevent haphazard activities and to enable programs to be organized for the most effective and attractive utilization of the water resources. In these days of increasing concern over pollution, existing data are generally inadequate to assess the natural deterioration of ground waters as a basis for defining pollution.

California

Drilling and testing the DOI-04-1A coalbed methane well, Fort Yukon, Alaska

The need for affordable energy sources is acute in rural communities of Alaska where costly diesel fuel must be delivered by barge or plane for power generation. Additionally, the transport, transfer, and storage of fuel pose great difficulty in these regions. Although small-scale energy development in remote Arctic locations presents unique challenges, identifying and developing economic, local sources of energy remains a high priority for state and local government. Many areas in rural Alaska contain widespread coal resources that may contain significant amounts of coalbed methane (CBM) that, when extracted, could be used for power generation. However, in many of these areas, little is known concerning the properties that control CBM occurrence and production, including coal bed geometry, coalbed gas content and saturation, reservoir permeability and pressure, and water chemistry. Therefore, drilling and testing to collect these data are required to accurately assess the viability of CBM as a potential energy source in most locations. In 2004, the U.S. Geological Survey (USGS) and Bureau of Land Management (BLM), in cooperation with the U.S. Department of Energy (DOE), the Alaska Department of Geological and Geophysical Surveys (DGGS), the University of Alaska Fairbanks (UAF), the Doyon Native Corporation, and the village of Fort Yukon, organized and funded the drilling of a well at Fort Yukon, Alaska to test coal beds for CBM developmental potential. Fort Yukon is a town of about 600 people and is composed mostly of Gwich'in Athabascan Native Americans. It is located near the center of the Yukon Flats Basin, approximately 145 mi northeast of Fairbanks.

Alaska

Hydrologic effects of reducing irrigation to maintain a permanent pool in John Martin Reservoir, Arkansas River Valley, Colorado

The U.S. Geological Survey has evaluated a plan by the Colorado Division of Wildlife to maintain a permanent pool of 10,000 acre-feet (1.2x10 7 cubic metres) in John Martin Reservoir on the Arkansas River. The proposed pool would be maintained through the use of water formerly diverted by the Catlin Canal Company to irrigate land in the Arkansas River valley. This plan was evaluated using a mathematical simulation model developed to test management alternatives in a stream-aquifer system. A 25-year period from 1949 through 1973 was simulated using monthly time intervals. Based on this simulation, it is concluded that (1) the proposed change in water use would be adequate to maintain a permanent pool of the proposed size, (2) surface-water diversions by most other canals in the study area would increase slightly under the proposed plan, (3) the flow of the Arkansas River at the Colorado-Kansas State line would increase slightly under the proposed plan, and (4) the ground-water system would not be significantly affected by the proposed change in water-use plan.

Colorado