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48 records · Page 3Linked to original sources

Regional ensemble modeling reduces uncertainty for digital soil mapping

Recent country and continental-scale digital soil mapping efforts have used a single model to predict soil properties across large regions. However, different ecophysiographic regions within large-extent areas are likely to have different soil-landscape relationships so models built specifically for these regions may more accurately capture these relationships relative to a ‘global’ model. We ask the question: Is a single ‘global’ model sufficient or are regionally-specific models useful for accurate digital soil mapping? We test this question by modeling soil depth classes across the 432,000 km 2 upper Colorado River Basin in the Western USA using a single global model, multiple ecophysiographic models, and ensembles of the ecophysiographic models. Effective soil depth class observations ( n = 12,194) were derived from multiple soil databases. Fifty-seven environmental covariates were derived from a 30 m digital elevation model, climate data, satellite imagery, and aeroradiometric data. Three independent land classifications were used to stratify the area. Two expert-derived land classifications, USDA Major Land Resource Areas (MLRA) and US-EPA Level III ecoregions, divided the study area into multiple ecophysiographic regions based on vegetation and broad-scale physiographic differences. The third land classification divided the study area into broad landforms. Soil depth observations were split into separate training ( n = 10,470) and validation ( n = 1,724) datasets. First, a ‘global’ random forest model was used to model soil depth classes using all training observations and covariates. ‘Global’ denotes a model built with all training data across the extent of the area, not a model at world extent. Second, the land classifications were used to subset the observations into ecophysiographic sub-datasets and random forest models were refit for each region. Models fit by ecophysiographic region are referred to as regional models. Thirdly, predictions from each regional model were fused into regional-ensemble models. Accuracy, Brier scores, and Shannon’s entropy were used to compare model accuracy and uncertainty. Regional ecophysiographic models were also compared to models built for geographic areas that were defined solely to be approximately equal in area. Training dataset density and the imbalance ratio were investigated to determine if data characteristics influenced regional accuracy/uncertainty metrics. Accuracy for the global model using the validation set was 62.8%. Regional model accuracies ranged between 56.1% and 75.0%. We found: 1) useful inter-regional differences in global model accuracy were revealed when the global model was validated by region, 2) no consistent relationship between training observation density and accuracy/uncertainty metrics, 3) no meaningful differences in accuracy and uncertainty metrics between physiographic and geographic regions, 4) ensembles of regionally-specific models were approximately as accurate as global models, and 5) both region-specific models and ensembles of regional models were less uncertain than the global model. Overall, we recommend the use of soil depth class predictions made from MLRA regional ensemble models because this prediction had higher accuracy than the ecoregion ensemble model prediction, but lower uncertainty than both the global model and the landform ensemble model predictions. We answer our question: Ensembles of regionally-specific models are approximately as accurate as global models, but result in less uncertainty.

Arizona, Colorado, Nevada, New Mexico, Utah, Wyomi↗

Plant growth and biocrust-fire interactions across five North American deserts

Biological soil crusts (biocrusts) are communities predominately comprised of lichens, bryophytes, fungi, algae, and cyanobacteria that form at the soil surface in dryland ecosystems worldwide. Biocrusts can influence the vascular plant community by altering surface hydrology, nutrient cycling, and the availability of microsites suitable for germination. Fire frequency has increased in many dryland systems, but the potential impacts of fire on biocrust-plant interactions remains unclear. Our study explores how biocrusts and the heating associated with fire affect plant growth across five North American desert sites: the Chihuahuan, Colorado Plateau, Great Basin, Mojave, and Sonoran. Using field-collected biocrusts and mineral soil samples from each of these five deserts, we investigated soil biogeochemical differences and the implications of soil heating and biocrust cover on greenhouse grown Elymus elymoides plants. Results showed plant biomass and leaf production were largely determined by the desert where soils originated, and that the soils collected from the Great Basin site, whether heated or not, were generally higher in nutrients and distinct from the other North American desert sites. In contrast, the Chihuahuan site was lower in nutrients and plant biomass growth compared with the other desert sites. In the short term, biocrusts and heating did not significantly affect the biogeochemical profile of individual desert site soils. However, biocrusts and soil heating positively influenced plant growth, and the combination of these factors influenced plants more strongly than either factor considered separately. These findings highlight the importance of biocrusts in mediating resources and suggest additional mechanisms through which fire may alter or accentuate dynamics between biocrusts and vascular plants.

Arizona, Colorado, New Mexico, Nevada↗

Responses of soil extracellular enzyme activities and bacterial community composition to seasonal stages of drought in a semiarid grassland

Extreme drought can strongly impact belowground communities and biogeochemical processes, including soil microbial community composition and extracellular enzyme activities (EEAs), which are considered key agents in ecosystem carbon (C) and nutrient cycling. However, our understanding of how seasonal timing of drought during the growing season affects soil microbial communities and their activity remains notably poor. In this study, we investigated the responses of soil physicochemical properties, EEAs, and bacterial community composition to extreme-duration drought imposed in the early-, mid-, or late-stages of the growing season in a semiarid grassland ecosystem in Inner Mongolia, China. Compared with the ambient control, the activities of C-, nitrogen (N)-, and phosphorus (P)-acquisition enzymes were significantly decreased in the mid- and/or late-stages of drought. Bacterial community diversity also significantly decreased in the mid- and late-stage drought treatments. Soil water content was the most important factor explaining changes in soil EEAs and bacterial community composition. At the end of the growing season, the activities of C-, N-, and P-acquisition enzymes had mostly recovered, while the bacterial community diversity in the mid- and late-stage drought treatments was still lower than the ambient control. Overall, our study demonstrates that the effects of extreme drought on soil EEAs and bacterial community composition depend on the timing of drought. Our results highlight that understanding the effects of extreme-duration drought at different stages of the growing season may play a vital role in predicting the responses of belowground function to global changes in grassland ecosystems.

Geoderma↗

Biocrust and the soil surface: Influence of climate, disturbance, and biocrust recovery on soil surface roughness

Biocrust communities promote soil surface roughness, a key functional characteristic for soil ecology. However, the spatial scales at which biocrust communities contribute to surface roughness are not well understood. To refine our understanding of the spatial dynamics between biocrust and soil surface roughness, we used mm-resolution terrestrial LiDAR to measure micro-topographic roughness at seven sub-meter, 3-dimensional kernels (spatial scales) for undisturbed and disturbed biocrusts within the cool Great Basin and the hot Chihuahuan Deserts of western North America. This multi-scalar approach applied within the different desert regions allowed us to explore two objectives: 1) assess the relative importance of climate and disturbance on biocrust roughness, and 2) evaluate how soil surface roughness evolves with biocrust recovery. For objective 1, we found that undisturbed cool desert biocrust was up to three times rougher than hot desert biocrust. Much of the difference in roughness between the two desert biocrust communities appeared to be from climate or other regional factors. However, positive correlations between roughness and biocrust indicators, including soil chlorophyll-a and the field-based Level of Development (LOD) index, suggested that differences in roughness at spatial scales ≤ 10 cm are directly related to biocrust development. Mechanical disturbance aimed at removing biocrust resulted in significant reductions in roughness and removed much of the observed differences in roughness between cool and hot desert soils. We evaluated biocrust recovery within the cool desert study area two years after mechanical disturbance and found that the disturbed soil increased in roughness up-to 300%. The increased surface roughness at spatial scales ≤ 10 cm were positively correlated with increased aggregate stability and indicators of biocrust reestablishment. We found that topographic change area was also an important contributor to roughness at all spatial scales, particularly at spatial scales ≥ 20 cm where it was the most important factor evaluated. These results provide insight into how biocrust interacts with other biophysical processes to influence soil surface roughness and how soil surfaces evolve at time scales relevant to soil restoration activities.

New Mexico, Utah↗

The trajectory of soil development and its relationship to soil carbon dynamics

It has been postulated that the amount of soil organic carbon (SOC) associated with soil minerals exhibits a threshold relationship in response to effective soil moisture (estimated as precipitation less evapotranspiration). To better characterize the role of moisture in influencing mechanisms of SOC storage during pedogenesis, we compare soils from two different chronosequence sites: the Santa Cruz and Mattole River marine terraces that together form a soil age-by-climate gradient (i.e., climo-chronosequence). Our results demonstrate how variation in the effective soil moisture may drive soil development along divergent pedogenic trajectories, resulting in variations in the form and depth distribution of secondary weathering products. In particular, the residual metals Fe and Al are directly related to the type of secondary minerals that accumulate during weathering, and these variations are coupled to differences in the storage and long-term preservation of SOC both within and between soils. Over time, these differences in soil development may lead to ‘pedogenic thresholds’ that further differentiate soil characteristics and influence SOC dynamics. In this case, the pedogenic threshold takes the form of clay-rich argillic horizons that once formed, inhibit aqueous transport, decouple shallow and deep soil environments, and potentially limit SOC inputs and increase microbial recycling in deep soils. Our data suggest argillic horizon development is favorable in the drier Santa Cruz soils, where kaolinite is the dominant secondary weathering product. In contrast, greater available moisture in soils of the Mattole chronosequence drive a different weathering trajectory characterized by the accumulation of more amorphous secondary minerals. As a result, the Mattole soils and do not exhibit argillic horizon development but are instead characterized by greater accumulation of SOC across all depths sampled. Overall, our results illustrate how the interaction of climate (i.e., moisture) and time may shape the trajectory of soil development and the dynamics of SOC storage and preservation.

California↗

Vertical movement of soluble carbon and nutrients from biocrusts to subsurface mineral soils

Dryland ecosystems can be constrained by low soil fertility. Within drylands, the soil nutrient and organic carbon (C) cycling that does occur is often mediated by soil surface communities known as biological soil crusts (biocrusts), which cycle C and nutrients in the top ca. 0–2 cm of soil. However, the degree to which biocrusts are influencing soil fertility and biogeochemical cycling in deeper, subsurface mineral soils is unclear. The movement of dissolved resources from biocrusts to deeper soil layers in leachate may be one of the main mechanisms through which biocrust fertility is transferred downward towards deeper microbial communities and plant roots occurring within mineral soil. Here we examined the role of biocrust leachate in contributing to subsurface nutrient and soluble C pools and subsurface microbial cycling. We collected biocrusts from three biocrust successional stages and explored resource pools in situ at multiple soil depths, while collecting leachate and measuring nutrient and organic C concentrations and metabolite composition from each successional stage in the laboratory. After four leachate collections, we conducted an incubation of mineral soil collected from below each biocrust successional stage to measure heterotrophic microbial CO 2 flux and biomass. Overall, our findings observed that the degree of nutrient and C connectivity between biocrusts and the sub-crust mineral soil depended on the biocrust successional stage and the element being considered, and the influence of biocrust successional stage on mineral soil CO 2 flux is likely related to long-term resource build up. Together, our results suggest that the influence of biocrust leachate on subsurface mineral soil is complex and context dependent, but, over longer time periods and at later successional stages, can have measurable effects on dryland soil biogeochemical cycling with feedbacks to resource availability and CO 2 flux.

Geoderma↗

Quantifying the influence of different biocrust community states and their responses to warming temperatures on soil biogeochemistry in field and mesocosm studies

Biocrusts influence soil biogeochemistry by fixing carbon (C) and nitrogen (N) and through leachate inputs to soils. Functional rates can vary among biocrust community states and in response to edaphic properties, heterotrophic microbial activity, and global change. Using soils and biocrusts from the Colorado Plateau, Utah, USA, we aimed to quantify the influence of early-successional (ES) and late-successional (LS) biocrust community states on soil biogeochemistry. In a field setting, we found soil was less “fertile” under ES than LS biocrust, but ES biocrust had a relative influence 1.3 times greater than LS biocrust on soil fertility. Leachate collected from LS biocrust had, on average, 6 times more organic C and 1.7 times more dissolved N than ES biocrust, but concentrations of phosphorus (P) and inorganic N did not differ among the two biocrust types. To disentangle influences of biocrusts and soil properties on biogeochemical pools, we constructed mesocosms from homogenized soil and left the surface bare or covered with ES or LS biocrust, before assignment to ambient or warmed (+5 °C) temperature treatments for 3 months. Multivariate biogeochemical properties differed among cover types, yet all exhibited losses of P, N, and organic C and nearly half of the biogeochemical variables considered did not differ among cover types. Mesocosms with LS biocrust retained more dissolved N, supported 8 additional, significant correlations among biogeochemical pools of the biocrust and mineral soil layer on average, and lost fewer of these correlations under warming. Overall, while soils under LS biocrusts were more fertile (i.e., had higher nutrient concentrations) than under ES, we did not find evidence implicating leachate as the primary driver of this difference. Biocrust influences on soil fertility were greater when mineral soil nutrients were in lower concentrations, highlighting the value of even incipient biocrusts for dryland functioning.

Arizona, Utah↗

Season of grazing interacts with soil texture, selecting for associations of biocrust morphogroups

Livestock grazing, a widespread land use in semi-arid systems, is often placed in opposition to the perpetuation of biological soil crusts (“biocrusts”: lichens, mosses, and algal crusts including cyanobacteria) that live on the soil surface and provide ecosystem functions. The composition of biocrusts and vascular plants varies with climate, soils, and disturbance. In general, ruderal mosses and light algal crusts make up greater proportions of biocrusts in the presence of disturbance, although morphogroups of biocrusts respond differently to various disturbances. It is unknown if there are scenarios under which grazing can occur and ruderal components of biocrust could be maintained. We examine the hypothesis that soil surface texture-moisture interactions influence the ability of biocrusts to withstand trampling, reasoning that finer-textured soils are firmer (therefore serving as a better substrate for biocrusts) when dry and that coarser-textured are firmer when wet. We test these relationships within Birds of Prey, National Conservation Area (Boise, Idaho, USA). Results demonstrate two associations of biocrusts, dependent on season of grazing: one dominated by light algal crusts and lichens that frequently occurs with wet season grazing, and a second dominated by tall mosses and cup lichens that frequently occurs with dry season grazing. High cover of the invasive annual grass, Bromus tectorum (L.) was observed on sites with coarse-textured soils, and high sand content, that are grazed at relatively high intensities, creating unstable surfaces, and likely putting biocrusts at greater susceptibility to trampling. Results suggest that livestock management that accounts for soil texture and moisture could be used to maintain cover of ruderal biocrusts on fine-textured soils, that are grazed in the dry season, at low intensity. We discuss our findings in the context of managing for species of interest. Our findings are timely as varying the season of grazing is increasingly discussed as a means of favoring desirable native perennial grasses. Although ruderal morphogroups of biocrusts are not interpreted as having equivalent ecosystem functions compared to intact biocrusts, their contributions to soil stability, fertility, hydrology, and weed abatement could increase if they were more intentionally targeted by management.

Geoderma↗

Establishing a pre-mining geochemical baseline at a uranium mine near Grand Canyon National Park, USA

During 2012, approximately 404,000 ha of Federal Land in northern Arizona was withdrawn from consideration of mineral extraction for a 20-year period to protect the Grand Canyon watershed from potentially adverse effects of U mineral exploration and development. The development, operation, and reclamation of the Canyon Mine during the withdrawal period provide an excellent field site to understand and document off-site migration of radionuclides within the withdrawal area. As part of the Department of Interior's (DOI's) study plan for the exclusion area, the objective of our study is to utilize pre-defined decision units (DUs) in areas within and surrounding the Canyon Mine to demonstrate how newly established incremental sampling methodologies (ISM) combined with multivariate statistical methods can be used to document a repeatable and statistically defensible measure of pre-mining baseline conditions in surface soils and stream sediment samples prior to ore extraction. During the survey in June 2013, the highest pre-mining 95% upper confidence level (UCL) concentrations with respect to As, Mo, U, and V were found in the triplicate samples collected from surface soils in the mine site DU designated as M1. Gamma activities were slightly elevated in soils within the M1 DU (up to 28 &mu;R/h); however, off-site gamma activities in soil and stream-sediment samples were lower (< 6 to 12 &mu;R/h). Hierarchical cluster analysis (HCA) was applied to 33 chemical constituents contained in the multivariate data generated from the analysis of triplicate samples collected in the soil and stream sediment DUs within and surrounding Canyon Mine. Most of the triplicate samples from individual DUs were grouped in the same dendrogram cluster when using a similarity value (SV) of 0.70 (unitless). Different group membership of triplicate samples from two of the four haul road DUs was likely the result of heterogeneity induced by non-native soil material introduced from the gravel road base or from vehicular traffic. Application of HCA and ISM will provide critical metrics to meet DOI's long-term goals for assessing off-site migration of radionuclides resulting from mining and reclamation in the current (2015) exclusion area associated within the Grand Canyon watershed and the associated national park.

Arizona↗

Carbon cycling in the mantled karst of the Ozark Plateaus, central United States

The nature of carbon (C) cycling in the unsaturated zone where groundwater is in contact with abundant gas-filled voids is poorly understood. The objective of this study was to trace inorganic-C cycling in a karst landscape using stable-C isotopes, with emphasis on a shallow groundwater flow path through the soil, to an underlying cave, and to the spring outlet of a cave stream in the Ozark Plateaus of northwestern Arkansas. Carbon dioxide (CO 2 ) concentration and isotopic composition (δ 13 C-CO 2 ) in gas and dissolved inorganic carbon (DIC) concentration and isotopic composition (δ 13 C-DIC) in water were measured in samples collected from two suction-cup soil samplers above the cave, three sites in the cave, and at the spring outlet of the cave stream. Soil-gas CO 2 concentration (median 2,578 ppm) and δ 13 C-CO 2 (median − 21.5‰) were seasonally variable, reflecting the effects of surface temperature changes on soil-CO 2 production via respiration and organic-matter decomposition. Cave-air CO 2 (median 1,026 ppm) was sourced from the soil zone and the surface atmosphere, with seasonally changing proportions of each source controlled by surface temperature-driven air density gradients. Soil-DIC concentration (median 1.7 mg L − 1 ) was lower and soil-δ 13 C-DIC (median − 19.5‰) was lighter compared to the cave (median 23.3 mg L − 1 and − 14.3‰, respectively) because carbonate-bedrock dissolution provided an inorganic source of C to the cave. Carbon species in the soil had a unique, light stable-C isotopic signature compared to the cave. Discrimination of soil-C sources to karst groundwater was achieved, which is critical for developing hydrologic budgets using environmental tracers such as C.

Geoderma Regional↗

Smectite-rich horizons in Inceptisols trigger shallow landslides in tropical granitic terranes

Puerto Rico was affected by >70,000 landslides in the wake of 2017 Hurricane Maria, and landslide prevalence was especially high in the Utuado region in the Cordillera Central. Landslide density was highest where soil parent material is granodiorite; landslide slip surfaces tended to be shallow (<60 cm), and often were mobilized rapidly and with long runout distances. This study combines field observations with soil mineralogy (bulk and clay fractions), soil geochemistry (bulk fraction), and soil strength as determined by field cone penetrometer testing (CPT) to test the hypothesis that clay-rich subsoil horizons function as slip planes when water-logged. Soil pits were excavated to depths of ∼200 cm in Ultisols on an undulating plateau and to ∼100 cm in Inceptisols on steep slopes (36-43 o ) that flank the plateau and cone penetrometer tests (CPT) were done within 2 m of the soil pit. Six pits were located adjacent to scarps from previous landslides, enabling analysis of soil profiles downward through extrapolated slip surfaces. Results from X-ray diffraction (XRD), X-ray fluorescence (XRF) and thermogravimetric analysis (TGA) indicate that soils are heterogeneous, often with subsoil horizons enriched in clay minerals and immobile elements (Al, Fe, Ti). Inceptisols on steep slopes often contain smectite-rich horizons at 30–60 cm depth that appear to function as slip surfaces; in other Inceptisols, such horizons are not present and landslide susceptibility is potentially lower. In Ultisols, soil mineralogy is dominated by kaolinite with minor halloysite, and increased kaolinite content at soil depths ≥80 cm at some sites suggests potential slip surfaces enhancing probability of landslides. The origin of clay-rich horizons appears to be (1) fractures in granodiorite that facilitate water flow and leaching, accelerating mineral dissolution during early weathering stages, and (2) smectite-rich buried soils under permeable colluvium likely deposited by a prior mass wasting event. Where clay-rich layers occur beneath more-permeable horizons, rapid infiltration then absorption of water in clay-rich subsoil horizons causes decreased shear strength and increased landslide susceptibility.

Puerto Rico↗

δ 13 C values of soil organic matter in semiarid grassland with mesquite ( Prosopis ) encroachment in southeastern Arizona

Over the past century, C3 woody plants and trees have increased in abundance in many semiarid ecosystems, displacing native C4 grasses. Livestock grazing, climatic fluctuations, and fire suppression are several reasons proposed for this shift. Soil carbon isotopic signatures are an ideal technique to evaluate carbon turnover rates in such ecosystems. On the gunnery ranges of Fort Huachuca in southeastern Arizona, study sites were established on homogeneous granitic alluvium to investigate the effects of fire frequency on &delta; 13 C values in surface soil organic matter (SOM). These ranges have had no livestock grazing for 50 years and a well-documented history of fires. Prosopis velutina Woot. (mesquite) trees have altered SOM &delta; 13 C pools by the concentration of plant nutrients and the addition of isotopically light litter. These soil carbon changes do not extend beyond canopy margins. Elevated total organic carbon (TOC), plant nutrient (N and P) concentrations, and depleted SOM &delta; 13 C values are associated with C3 Prosopis on an unburned plot, which enables recognition of former Prosopis -occupied sites on plots with recent fire histories. Elevated nutrient concentrations associated with former Prosopis are retained in SOM for many decades. Surface SOM &delta; 13 C values indicate the estimated minimum turnover time of C4-derived carbon beneath large mature Prosopis is about 100&ndash;300 years. In contrast, complete turnover of original C3 carbon to C4 carbon under grasslands is estimated to take a minimum of 150&ndash;500 years. Our study confirms that C4 grass cover has declined over the past 100 years, although isolated C3 trees or shrubs were not uncommon on the historic C4-dominated grasslands. We find evidence in surface soil layers for a modern C3 plant expansion reflected in the substantial shift of SOM &delta; 13 C values from C4 grasses to C3 shrublands.

Geoderma↗