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USGS2014

Invasive and introduced reptiles and amphibians

Why is there a section on introduced amphibians and reptiles in this volume, and why should veterinarians care about this issue? Globally, invasive species are a major threat to the stability of native ecosystems, 1,2 and amphibians and reptiles are attracting increased attention as potential invaders. Some introduced amphibians and reptiles have had a major impact (e.g., Brown Tree Snakes [ Boiga irregularis ] wiping out the native birds of Guam 3 or Cane Toads [ Rhinella marina ] poisoning native Australian predators). 4 For the vast majority of species, however, the ecological, economic, and sociopolitical effects of introduced amphibians and reptiles are generally poorly quantified, largely because of a lack of focused research effort rather than because such effects are nonexistent. This trend is alarming given that rates of introduction have increased exponentially in recent decades.

Book chapter↗

USGS2010

Sharing the floodplain: Mediated modeling for environmental management

Complex ecosystems, such as the Upper Mississippi River (UMR), present major management challenges. Such systems often provide a range of ecosystem services that are differentially valued by stakeholders representing distinct interests (e.g., agriculture, conservation, navigation) or institutions (e.g., federal and state agencies). When no single entity has the knowledge or authority to resolve conflicts over shared resource use, stakeholders may struggle to jointly understand the scope of the problem and to reach reasonable compromises. This paper explores mediated modeling as a group consensus building process for understanding relationships between ecological, economic and cultural well-being in the UMR floodplain. We describe a workshop structure used to engage UMR stakeholders that may be extended to resource use conflicts in other complex ecosystems. We provide recommendations for improving on these participatory methods in structuring future efforts. In conclusion, we suggest that tools which facilitate collaborative learning, such as mediated modeling, need to be incorporated at an institutional level as a vital element of integrated ecosystem management. ?? 2008 Elsevier Ltd.

Environmental Modelling and Software↗

USGS2021

Using decision analysis to collaboratively respond to invasive species threats: A case study of Lake Erie grass carp (Ctenopharyngodon idella)

Decisions about invasive species control and eradication can be difficult because of uncertainty in population demographics, movement ecology, and effectiveness of potential response actions. These decisions often include multiple stakeholders and management entities with potentially different objectives, management priorities, and jurisdictional authority. We provide a case study of using multi-party, collaborative decision analysis to aid decision makers in determining objectives and control actions for invasive grass carp ( Ctenopharyngodon idella ) in Lake Erie. Creating this process required binational (Canada-United States) and multi-state/provincial collaboration to craft a shared problem statement, establish objectives related to ecological, economic, and social concerns, determine potential response actions, and evaluate consequences and tradeoffs of these actions. We used participatory modeling and expert elicitation to evaluate the effectiveness of control scenarios that varied in action type (i.e., removal efforts and spawning barriers) and the temporal and spatial application of these actions. Using a matrix population model parameterized for western Lake Erie grass carp, we found that removal efforts concentrated in areas of high catchability, when paired with a spawning barrier on the Sandusky River, Ohio, USA, could effectively control grass carp in Lake Erie, if all assumptions are met. We determined a set of key uncertainties regarding gear catchability and current population size that have led to the transition to an adaptive management process. In addition, our work formed the basis for grass carp management plans for the states of Michigan and Ohio and has provided a means for collaboration among agencies for effective application of control efforts.

Michigan, Ohio↗

USGS2017

A synthesis of thresholds for focal species along the U.S. Atlantic and Gulf Coasts: A review of research and applications

The impacts from climate change are increasing the possibility of vulnerable coastal species and habitats crossing critical thresholds that could spur rapid and possibly irreversible changes. For species of high conservation concern, improved knowledge of quantitative thresholds could greatly improve management. To meet this need, we synthesized information pertaining to biological responses as tipping points to sea level rise (SLR) and coastal storms for 45 fish, wildlife, and plant species along the U.S. Atlantic and Gulf Coasts and Caribbean through a literature review and expert elicitation. Although these species were selected based on their ecological, economic, and cultural importance, just over half (56%, n = 25) have quantitative threshold data currently available that can be used to assess the effects of SLR and storms during some aspect of their life history. Birds, reptiles, and plants represent the best studied coastal species. Thirteen of the species (29%) are projected to lose at least 50% of their population or habitat (e.g., foraging, nesting, spawning, or resting habitat) in some areas with a 0.5 m or greater rise in sea levels by 2100. Two species (a bird and reptile) may gain habitat from projected SLR and be resilient to future impacts. Numeric thresholds were not available for the remaining 20 species we searched for. Coastal fishes, mammals, and amphibians were among the groups representing a major information gap in this field of research. In addition, quantitative threshold responses to coastal storms were scarce for all taxa. While vulnerability assessments and qualitative research related to the impacts of SLR and storms on coastal species and habitats are increasing, work that incorporates quantitative thresholds as response and impact metrics remains limited. Additional monitoring, modeling, and research that provides multiple quantitative thresholds across species' life stages and/or latitudinal gradients is ideal to support robust coastal management and decision-making across spatio-temporal scales in the face of climate change.

Ocean and Coastal Management↗

USGS2023

Using cyanobacteria and other phytoplankton to assess trophic conditions: A qPCR-based, multi-year study in twelve large rivers across the United States

Phytoplankton is the essential primary producer in fresh surface water ecosystems. However, excessive phytoplankton growth due to eutrophication significantly threatens ecologic, economic, and public health. Therefore, phytoplankton identification and quantification are essential to understanding the productivity and health of freshwater ecosystems as well as the impacts of phytoplankton overgrowth (such as Cyanobacterial blooms) on public health. Microscopy is the gold standard for phytoplankton assessment but is time-consuming, has low throughput, and requires rich experience in phytoplankton morphology. Quantitative polymerase chain reaction (qPCR) is accurate and straightforward with high throughput. In addition, qPCR does not require expertise in phytoplankton morphology. Therefore, qPCR can be a useful alternative for molecular identification and enumeration of phytoplankton. Nonetheless, a comprehensive study is missing which evaluates and compares the feasibility of using qPCR and microscopy to assess phytoplankton in fresh water. This study 1) compared the performance of qPCR and microscopy in identifying and quantifying phytoplankton and 2) evaluated qPCR as a molecular tool to assess phytoplankton and indicate eutrophication. We assessed phytoplankton using both qPCR and microscopy in twelve large freshwater rivers across the United States from early summer to late fall in 2017, 2018, and 2019. qPCR- and microscope-based phytoplankton abundance had a significant positive linear correlation (adjusted R 2 = 0.836, p -value < 0.001). Phytoplankton abundance had limited temporal variation within each sampling season and over the three years studied. The sampling sites in the midcontinent rivers had higher phytoplankton abundance than those in the eastern and western rivers. For instance, the concentration (geometric mean) of Bacillariophyta, Cyanobacteria, Chlorophyta, and Dinoflagellates at the sampling sites in the midcontinent rivers was approximately three times that at the sampling sites in the western rivers and approximately 18 times that at the sampling sites in the eastern rivers. Welch's analysis of variance indicates that phytoplankton abundance at the sampling sites in the midcontinent rivers was significantly higher than that at the sampling sites in the eastern rivers ( p -value = 0.013) but was comparable to that at the sampling sites in the western rivers ( p -value = 0.095). The higher phytoplankton abundance at the sampling sites in the midcontinent rivers was presumably because these rivers were more eutrophic. Indeed, low phytoplankton abundance occurred in oligotrophic or low trophic sites, whereas eutrophic sites had greater phytoplankton abundance. This study demonstrates that qPCR-based phytoplankton abundance can be a useful numerical indicator of the trophic conditions and water quality in freshwater rivers.

Water Research↗

USGS2016

Vegetation of semi-stable rangeland dunes of the Navajo Nation, Southwestern USA

Dune destabilization and increased mobility is a worldwide issue causing ecological, economic, and health problems for the inhabitants of areas with extensive dune fields. Dunes cover nearly a third of the Navajo Nation within the Colorado Plateau of southwestern USA. There, higher temperatures and prolonged drought beginning in 1996 have produced significant increases in dune mobility. Vegetation plays an important role in dune stabilization, but there are few studies of the plants of the aeolian surfaces of this region. We examined plant species and their attributes within a moderately vegetated dune field of the Navajo Nation to understand the types and characteristics of plants that stabilize rangeland dunes. These dunes supported a low cover of mixed grass-scrubland with fifty-two perennial and annual species including extensive occurrence of non-native annual Salsola spp. Perennial grass richness and shrub cover were positively associated with increased soil sand composition. Taprooted shrubs were more common on sandier substrates. Most dominant grasses had C4 photosynthesis, suggestive of higher water-use efficiencies and growth advantage in warm arid environments. Plant cover was commonly below the threshold of dune stabilization. Increasing sand movement with continued aridity will select for plants adapted to burial, deflation, and abrasion. The study indicates plants tolerant of increased sand mobility and burial but more investigation is needed to identify the plants adapted to establish and regenerate under these conditions. In addition, the role of Salsola spp. in promoting decline of perennial grasses and shrubs needs clarification.

Arizona, Colorado, New Mexico, Utah↗

USGS2016

Supporting diverse data providers in the open water data initiative: Communicating water data quality and fitness of use

Shared, trusted, timely data are essential elements for the cooperation needed to optimize economic, ecologic, and public safety concerns related to water. The Open Water Data Initiative (OWDI) will provide a fully scalable platform that can support a wide variety of data from many diverse providers. Many of these will be larger, well-established, and trusted agencies with a history of providing well-documented, standardized, and archive-ready products. However, some potential partners may be smaller, distributed, and relatively unknown or untested as data providers. The data these partners will provide are valuable and can be used to fill in many data gaps, but can also be variable in quality or supplied in nonstandardized formats. They may also reflect the smaller partners' variable budgets and missions, be intermittent, or of unknown provenance. A challenge for the OWDI will be to convey the quality and the contextual “fitness” of data from providers other than the most trusted brands. This article reviews past and current methods for documenting data quality. Three case studies are provided that describe processes and pathways for effective data-sharing and publication initiatives. They also illustrate how partners may work together to find a metadata reporting threshold that encourages participation while maintaining high data integrity. And lastly, potential governance is proposed that may assist smaller partners with short- and long-term participation in the OWDI.

Journal of the American Water Resources Associatio↗

USGS2025

Self‐sustaining populations are a conservation vision, not an operational objective

It is common for species conservation plans to identify the establishment or maintenance of a “self-sustaining population” as an objective. However, this statement vaguely conflates different formulations and interpretations of population viability, management costs, and cultural preferences for non-invasive population management. Hidden value judgments and assumptions about these components can create disagreement and conflict among partners. Thus, although a simple statement about “achieving self-sustaining populations” can be a powerful strategic vision, evoking important shared values, it will not be effective as an operational objective for conservation decision making. Best practices in decision making emphasize the importance of fundamental objectives that are clear, unambiguous, and operational. Conservation planners may be better served by replacing the self-sustaining concept with better-defined fundamental objectives using quantitative statements about viability and clearly laying out ecological, economic, and cultural values.

Conservation Science and Practice↗

USGS2023

Morphological differences between wild and hatchery-reared Bloater (Coregonus hoyi) from Lake Michigan, USA

Coregonines (ciscoes and whitefishes) are economically, ecologically, and culturally important fishes that are distributed throughout the Northern Hemisphere. In the Laurentian Great Lakes, coregonines declined throughout the 19th and 20th centuries, and managers have prioritized their restoration. A key restoration tool is reintroduction via stocking. However, hatchery-reared coregonines can display different morphologies than wild fish, which could affect their fitness. Unfortunately, our understanding of these differences is limited because previous work did not adequately remove allometric effects in morphological analyses. We compared morphologies between wild and hatchery-reared Bloater ( Coregonus hoyi ) from the same stock using appropriate size corrections. Hatchery-reared fish had shorter heads, shorter dorsal fins, and shallower bodies than wild fish. Moreover, some characters differed across wild fish collections. Our results improve our understanding of how artificial rearing can impact coregonine morphology, and we recommend future studies on what causes these differences and whether they impact fitness.

Fisheries Management and Ecology↗

USGS2012

Role of remote sensing for land-use and land-cover change modeling

As the impacts of land-use and land-cover (LULC) change on carbon dynamics, climate change, hydrology, and biodiversity have been recognized, modeling of this transformational force has become increasingly important. Given the wide variety of applications that rely on the availability of LULC projections, modeling approaches have originated from a variety of disciplines, including geography, landscape ecology, economics, biology, and others. Initial modeling was often isolated within each discipline, but multidisciplinary modeling frameworks were developed as LULC modelers began to integrate the socioeconomic and biophysical components of LULC change. The empirical and theoretical basis for this work falls within land-use science, and this ‡eld documents both land-use and land-cover change, explains the coupled human-environment dynamics that produce the changes, and provides tools for producing spatially explicit LULC models (Mertens and Lambin, 1999; Rindfuss et al., 2004).

Book chapter↗

USGS2016

Global assessment of schistosomiasis control over the past century shows targeting the snail intermediate host works best

Background Despite control efforts, human schistosomiasis remains prevalent throughout Africa, Asia, and South America. The global schistosomiasis burden has changed little since the new anthelmintic drug, praziquantel, promised widespread control. Methodology We evaluated large-scale schistosomiasis control attempts over the past century and across the globe by identifying factors that predict control program success: snail control (e.g., molluscicides or biological control), mass drug administrations (MDA) with praziquantel, or a combined strategy using both. For data, we compiled historical information on control tactics and their quantitative outcomes for all 83 countries and territories in which: (i) schistosomiasis was allegedly endemic during the 20 th century, and (ii) schistosomiasis remains endemic, or (iii) schistosomiasis has been "eliminated," or is "no longer endemic," or transmission has been interrupted. Principal Findings Widespread snail control reduced prevalence by 92 ± 5% (N = 19) vs. 37 ± 7% (N = 29) for programs using little or no snail control. In addition, ecological, economic, and political factors contributed to schistosomiasis elimination. For instance, snail control was most common and widespread in wealthier countries and when control began earlier in the 20 th century. Conclusions/Significance Snail control has been the most effective way to reduce schistosomiasis prevalence. Despite evidence that snail control leads to long-term disease reduction and elimination, most current schistosomiasis control efforts emphasize MDA using praziquantel over snail control. Combining drug-based control programs with affordable snail control seems the best strategy for eliminating schistosomiasis.

PLoS Neglected Tropical Diseases↗

USGS2018

A multiscale natural community and species-level vulnerability assessment of the Gulf Coast, USA

Vulnerability assessments combine quantitative and qualitative evaluations of the exposure, sensitivity, and adaptive capacity of species or natural communities to current and future threats. When combined with the economic, ecological or evolutionary value of the species, vulnerability assessments quantify the relative risk to regional species and natural communities and can enable informed prioritization of conservation efforts. Vulnerability assessments are common practice in conservation biology, including the potential impacts of future climate scenarios. However, geographic variation in scenarios and vulnerabilities is rarely quantified. This gap is particularly limiting for informing ecosystem management given that conservation practices typically vary by sociopolitical boundaries rather than by ecological boundaries. To support prioritization of conservation actions across a range of spatial scales, we conducted the Gulf Coast Vulnerability Assessment (GCVA) for four natural communities and eleven focal species around the Gulf of Mexico based on current and future threats from climate change and land-use practices out to 2060. We used the Standardized Index of Vulnerability and Value (SIVVA) tool to assess both natural community and species vulnerabilities. We observed greater variation across ecologically delineated subregions within the Gulf Coast of the U.S. than across climate scenarios. This novel finding suggests that future vulnerability assessments incorporate regional variation and that conservation prioritization may vary across ecological subregions. Across subregions and climate scenarios the most prominent threats were legacy effects, primarily from habitat loss and degradation, that compromised the adaptive capacity of species and natural communities. The second most important threats were future threats from sea-level rise. Our results suggest that the substantial threats species and natural communities face from climate change and sea-level rise would be within their adaptive capacity were it not for historic habitat loss, fragmentation, and degradation.

Alabama, Florida, Georgia, Louisiana, Mississippi,↗

USGS2020

Wildlife resistance and protection in a changing New England landscape

Rapid changes in climate and land use threaten the persistence of wildlife species. Understanding where species are likely to occur now and in the future can help identify areas that are resistant to change over time and guide conservation planning. We estimated changes in species distribution patterns and spatial resistance in five future scenarios for the New England region of the northeastern United States. We present scenario-specific distribution change maps for nine harvested wildlife species, identifying regions of increasing, decreasing, or stable habitat suitability within each scenario. Next, we isolated areas of greatest resistance across all future scenarios. Resistance was also evaluated relative to current land protection to identify patterns in and out of Protected Areas (PAs). Generally, species distributions declined in area over the 50-year assessment period (2010-2060), with the greatest declines occurring for moose (62.4%) and wild turkey (24.2%). Species resistance varied considerably across the region with coyote demonstrating the highest regional resistance (91.81% of the region) and moose demonstrating the lowest (0.76 % of the region). At the state level, average focal species resistance was highest in Maine and lowest in Massachusetts. Many of the focal species showed high overlap in resistance and land protection. Coyote, white-tailed deer, and black bear had the highest representation of resistance within PAs, while moose and wild turkey had the largest proportions of regional resistance occurring within PAs. Overall, relatively small portions of New England – ranging between 0.25% and 21.12% – were both protected and resistant for the focal species. Our results provide estimates of resistance that can inform conservation planning for commonly harvested species that are important ecologically, economically, and culturally to the region. Expanding protected area coverage to include resistant areas may provide longer term benefits to these species.

Connecticut, Maine, Massachusetts, New Hampshire, ↗

USGS2007

Advances and opportunities in assessing contaminant sensitivity of freshwater mussel (unionidae) early life stages

Freshwater mussels (family Unionidae, also referred to as freshwater pearly mussels, unionids, or naiades) are one of North America’s most endangered faunal groups. Near unanimity exists in characterizations of the imperilment of these ecologically, economically, and culturally important bivalve mollusks. Freshwater mussels are a renewable resource supporting a shell industry in the United States valued at $40–50 million annually [1]. In addition to being a food source for aquatic and terrestrial vertebrates, this diverse fauna helps stabilize sediment [2] and provides critical nutrient and energy cycling in streams and lakes by filtering phytoplankton, bacteria, and particulate organic matter from the water column [3]. Thirty-five species of freshwater mussels are extinct [4], 70 species are listed as threatened or endangered under the U.S. Endangered Species Act (www.fws.gov/endangered/wildlife.html), and nearly 180 species are identified as critically imperiled or vulnerable (www.natureserve.org/explorer). Declines in freshwater mussels are not unique to North America [5], but because the taxon reaches its greatest richness here, impacts are especially noteworthy.

Environmental Toxicology and Chemistry↗

USGS2024

Managing basin-scale carbon sequestration: A tragedy of the commons approach

The Tragedy of the Commons is a well studied problem in the literature of ecology, economics, and environmental policy which illustrates the deleterious consequences of managing common pool resources when individual and social incentives are misaligned. In this work, we apply a simple model of carbon sequestration in a deep saline aquifer by two neighboring geologic CO 2 storage (GCS) operators to begin investigating if a Tragedy of the Commons framework applies to GCS. Specifically, we consider the pressure space as a “commons” because the injection by each firm at its own well increases the downhole injection pressure at both wells. We assume that a firm will decrease its injection rate if the downhole pressure at its well exceeds a predefined maximum (i.e., exceeds the “pressure limit”). With this assumption in place, we find that the same injection flowrates are optimal for both wells, regardless of whether they are owned by the same firm or competing firms. This suggests that GCS may not be best represented by a pure Tragedy of the Commons framework under our initial assumptions. However, there could be economic incentives or contractual obligations that may result in either or both GCS operators being unwilling to reduce their injection rates. Thus, we conclude the conference paper with a discussion of future extensions of our approach that may demonstrate closer alignment with the Tragedy of the Commons, including explicit definitions of pore-space rights, firm uncertainty regarding the parameters of the Theis equation, and the potential role of unitization.

Conference Paper↗

USGS2003

Surface Water in Hawaii

Surface water in Hawaii is a valued resource as well as a potential threat to human lives and property. The surface-water resources of Hawaii are of significant economic, ecologic, cultural, and aesthetic importance. Streams supply more than 50 percent of the irrigation water in Hawaii, and although streams supply only a few percent of the drinking water statewide, surface water is the main source of drinking water in some places. Streams also are a source of hydroelectric power, provide important riparian and instream habitats for many unique native species, support traditional and customary Hawaiian gathering rights and the practice of taro cultivation, and possess valued aesthetic qualities. Streams affect the physical, chemical, and aesthetic quality of receiving waters, such as estuaries, bays, and nearshore waters, which are critical to the tourism-based economy of the islands. Streams in Hawaii pose a danger because of their flashy nature; a stream's stage, or water level, can rise several feet in less than an hour during periods of intense rainfall. Streams in Hawaii are flashy because rainfall is intense, drainage basins are small, basins and streams are steep, and channel storage is limited. Streamflow generated during periods of heavy rainfall has led to loss of property and human lives in Hawaii. Most Hawaiian streams originate in the mountainous interiors of the islands and terminate at the coast. Streams are significant sculptors of the Hawaiian landscape because of the erosive power of the water they convey. In geologically young areas, such as much of the southern part of the island of Hawaii, well-defined stream channels have not developed because the permeability of the surface rocks generally is so high that rainfall infiltrates before flowing for significant distances on the surface. In geologically older areas that have received significant rainfall, streams and mass wasting have carved out large valleys.

Fact Sheet↗

USGS2022

Decision-making for managing harmful algal blooms

Cyanobacteria are a global water-quality concern because these organisms can develop into harmful blooms that affect ecologic, economic, and public health. U.S. Geological Survey scientists worked with the New York State Office of Parks, Recreation and Historic Preservation and the New York State Department of Environmental Conservation to develop a structured decision-making template for managing cyanobacterial harmful algal blooms. This approach can help natural resource managers make decisions to manage water bodies threatened by harmful algal blooms.

New York↗

USGS1998

Digital mine claim density map for Federal lands in Montana, 1996

This report describes a digital map and data files generated by the U.S. Geological Survey (USGS) to provide digital spatial mining claim information for Federal lands in Montana as of March, 1997. Statewide, 159,704 claims had been recorded with the Bureau of Land Management since 1975. Of those claims, 21,055 (13%) are still actively held while 138,649 (87%) are closed and are no longer held. Montana contains 147,704 sections (usually 1 section equals 1 square mile) in the Public Land Survey System, with 8,569 sections (6%) containing claim data. Of the sections with claim data, 2,192 (26%) contain actively held claims. Only 1.5% of Montana’s sections contains actively held mining claims. The four types of mining claim are lode, placer, mill, and tunnel. A mill claim may be as much as 5 acres or 1/128th (0.78125%) of a square mile. A lode claim, about 20 acres, would cover 1/32nd (3.125%) of a square mile. Mining claim data is earth science information deemed to be relevant to the assessment of historic, current, and future ecological, economic, and social systems. The digital map and data files that are available in this report are suitable for geographic information system (GIS)-based regional assessments at a scale of 1:100,000 or smaller. Campbell (1996) summarized the methodology and GIS techniques that were used to produce the mining claim density map of the Pacific Northwest. Campbell and Hyndman (1997) displayed mining claim information for the Pacific Northwest that used data acquired in 1994. Appendix A of this report lists the attribute data for the digital data files. Appendix B contains the GIS metadata.

Montana↗