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At least 55 records · Page 3Linked to original sources
USGS1991

Conservation of the yellow-shouldered blackbird Agelaius xanthomus, an endagered West Indian species

The yellow-shouldered blackbird Agelaius xanthomus , endemic to Puerto Rico and Mona Island, is endangered, mainly because of brood parasitism by the shiny cowbird Molothrus bonariensis , which reached Puerto Rico at least 30 years ago. The yellow-shouldered blackbird populations have since declined, about 770–1200 remaining (470–900 on Mona Island) by 1982–1986 compared to a population of about 2400 in 1975. Nearly all nests of blackbirds in most of its habitats are parasitized by cowbirds. This significantly reduces nesting success, but blackbirds have evolved no defenses against brood parasitism. Removal of cowbirds from the yellow-shouldered blackbird nesting grounds, modeled after similar programmes for the brown-headed cowbird Molothrus ater on Kirtland's warbler Dendroica kirtlandii nesting areas, significantly increased blackbird production. Blackbirds readily accept nest boxes, and breeding populations can be established in otherwise unusable sites and can be concentrated in mangrove habitats, were they are more easily protected by cowbird removal. Furthermore, yellow-shouldered blackbird pairs using cavities, including nest boxes, fledged more young per nest than pairs using open nests.

Boquerón Commonwealth Forest, Roosevelt Roads Nava↗
USGS1975

Lakes of Oregon, Volume 3: Hood River, Multnomah, Washington and Yamhill Counties

An inventory of lakes and reservoirs of Oregon is essential for a complete evaluation of the total surface-water supply of the State and to provide a basis for answering questions about Oregon's lakes. Much of the information on lakes and reservoirs previously collected by Federal and State agencies has never been published. These data were compiled and used as a basis for collecting additional information. This report provides information for use by city, county, and State planning groups as well as for sportsmen, tourists, and others interested in preserving the recreational value of Oregon's lakes. Because of the large number of lakes and reservoirs in Oregon, a single report covering the State would be bulky. Therefore, the lake information is being published in several volumes on a county or multicounty basis. Volume 1, published in 1973, covered Clatsop, Columbia, and Tillamook Counties; volume 2, published in 1974, included Benton, Lincoln, and Polk Counties. Hood River, Multnomah, Washington, and Yamhill Counties were selected for volume 3. (See fig. 1.) In addition to office compilation of existing data, each lake was also visited. Most visits were made in summer or early fall when lakes were most accessible and when water temperature and biological activitiy were at a maximum.

Oregon↗
USGS1977

Lakes of Oregon, Volume 5: Marion County

An inventory of lakes and reservoirs of Oregon is essential for a complete evaluation of the total surface-water supply of the State and to provide a basis for answering questions about Oregon's lakes. Much of the information on lakes and reservoirs previously collected by Federal and State agencies has never been published. Those data were compiled and used as a basis for collecting additional information. This report provides information for use by city, county, and State planning groups as a basis for designing more advanced interpretative studies. The information also will be useful to sportsmen, tourists, and others interested in preserving the recreational value of Oregon's lakes. Because of the large number of lakes and reservoirs in Oregon, a single report covering the State would be bulky. Therefore, the lake information is being issued in several volumes on a county or multicounty basis. Volume 1, released in 1973, covered Clatsop, Columbia, and Tillamook Counties; volume 2 (1974) included Benton, Lincoln, and Polk Counties; volume 3 (1975) included Hood River, Multnomah, Washing ton, and Yamhill Counties; and volume 4 (1976) included Clackamas County. Marion County was selected for volume 5. (See figure 1.) The southeast part of Marion County lies in a national wilderness area. Wilderness areas are protected under the National Wilderness Preservation System that directs management "for the use and enjoyment of the American people in such a manner as will leave them unimpaired for future use and enjoyment as wilderness." Regulations for wilderness use and entry permits may be obtained at U.S. Forest Service offices. In addition to office compilation of existing data, each lake was visited. Most visits were made in summer or early fall when lakes were most accessible and when water temperature and biological activitiy were near maximum.

Oregon↗
USGS1979

Lakes of Oregon, Volume 6: Douglas County

An inventory of lakes and reservoirs in Oregon is useful in evaluating the surface-water supply of the State and in providing answers to questions about Oregon's lakes. Much of the information on lakes and reservoirs previously collected by Federal and State agencies has never been published. Those data were compiled and used as a basis for collecting additional information. This report provides information for use by city, county, and State planning groups in planning interpretative studies. The information also will be useful to sportsmen, tourists, and others interested in preserving the recreational value of Oregon's lakes. Because of the large number of lakes and reservoirs in Oregon, a single report covering the State would be bulky. Therefore, lake information is being issued in several volumes on a county or multicounty basis. Volume 1, released in 1973 covered Clatsop, Columbia, and Tillamook Counties; volume 2 (1974) included Benton, Lincoln, and Polk Counties; volume 3 (1975) included Hood River, Multnomah, Washington, and Yamhill Counties; volume 4 (1976) included Clackamas County; and volume 5 (1977) included Marion County. Douglas County was selected for volume 6. (See figure 1.) In addition to office compilation of existing data, each lake was visited. Most visits were made in summer or early fall when lakes were most accessible and when water temperature and biological activity were near maximum.

Oregon↗
USGS1996

Methods of analysis by the U.S. Geological Survey National Water Quality Laboratory-Preparation procedure for aquatic biological material determined for trace metals

A method for the chemical preparation of tissue samples that are subsequently analyzed for 22 trace metals is described. The tissue-preparation procedure was tested with three National Institute of Standards and Technology biological standard reference materials and two National Water Quality Laboratory homogenized biological materials. A low-temperature (85 degrees Celsius) nitric acid digestion followed by the careful addition of hydrogen peroxide (30-percent solution) is used to decompose the biological material. The solutions are evaporated to incipient dryness, reconstituted with 5 percent nitric acid, and filtered. After filtration the solutions were diluted to a known volume and analyzed by inductively coupled plasma-mass spectrometry (ICP-MS), inductively coupled plasma-atomic emission spectrometry (ICP-AES), and cold vapor-atomic absorption spectrophotometry (CV-AAS). Many of the metals were determined by both ICP-MS and ICP-AES. This report does not provide a detailed description of the instrumental procedures and conditions used with the three types of instrumentation for the quantitation of trace metals determined in this study. Statistical data regarding recovery, accuracy, and precision for individual trace metals determined in the biological material tested are summarized.

Open-File Report↗
USGS1967

Some engineering geology problems at Mammoth Cave National Park, Kentucky

The U.S. Geological Survey, at the request of the rational Park Service, participated in a field symposium May 22-26, 1967, at Mammoth Cave National Park, Kentucky. This symposium, held by the National Park Service, was to determine the applicability of the Wilderness Act of 1964 to underground and surface portions of the Park (W. Drew Chick, Jr., written communication, 1967). Scientific evidence bearing on the relationships between human surface activities and natural underground openings was examined and discussed at the symposium. This report discusses relations between various types of surface activities and physical damage to the cave openings and features. Additional interpretive material is taken from the literature and from limited laboratory information. Possible hydrologic and biologic effects are not considered here, but were investigated by other members of the symposium. Hydrologic effects are discussed in companion report by Robert V. Cushman of the Geological Survey.

Kentucky↗
USGS2010

Considerations for developing wolf harvesting regulations in the contiguous United States

A s gray wolves ( Canis lupus ) are removed from the federal Endangered Species List, management reverts to the states. Eventually most states will probably allow public wolf harvesting. Open seasons between about 1 November and 1 March accord more with basic wolf biology than during other times. Managers who consider wolf biology and public sensitivities, adapt public-taking regulations accordingly, and adjust harvest regulations as they learn will be best able to maximize the recreational value of wolf harvesting, minimize public animosity toward it, and meet their harvest objectives.

Alaska, Colorado, Idaho, Michigan, Minnesota, Mont↗
USGS2008

Modeling individual effects in the Cormack-Jolly-Seber Model: A state-space formulation

In population and evolutionary biology, there exists considerable interest in individual heterogeneity in parameters of demographic models for open populations. However, flexible and practical solutions to the development of such models have proven to be elusive. In this article, I provide a state-space formulation of open population capture-recapture models with individual effects. The state-space formulation provides a generic and flexible framework for modeling and inference in models with individual effects, and it yields a practical means of estimation in these complex problems via contemporary methods of Markov chain Monte Carlo. A straightforward implementation can be achieved in the software package WinBUGS. I provide an analysis of a simple model with constant parameter detection and survival probability parameters. A second example is based on data from a 7-year study of European dippers, in which a model with year and individual effects is fitted.

Biometrics↗
USGS1993

Coupled effects of vertical mixing and benthic grazing on phytoplankton populations in shallow, turbid estuaries

Coastal ocean waters tend to have very different patterns of phytoplankton biomass variability from the open ocean, and the connections between physical variability and phytoplankton bloom dynamics are less well established for these shallow systems. Predictions of biological responses to physical variability in these environments is inherently difficult because the recurrent seasonal patterns of mixing are complicated by aperiodic fluctuations in river discharge and the high-frequency components of tidal variability. We might expect, then, less predictable and more complex bloom dynamics in these shallow coastal systems compared with the open ocean. Given this complex and dynamic physical environment, can we develop a quantitative framework to define the physical regimes necessary for bloom inception, and can we identify the important mechanisms of physical-biological coupling that lead to the initiation and termination of blooms in estuaries and shallow coastal waters? Numerical modeling provides one approach to address these questions. Here we present results of simulation experiments with a refined version of Cloern's (1991) model in which mixing processes are treated more realistically to reflect the dynamic nature of turbulence generation in estuaries. We investigated several simple models for the turbulent mixing coefficient. We found that the addition of diurnal tidal variation to Cloern's model greatly reduces biomass growth indicating that variations of mixing on the time scale of hours are crucial. Furthermore, we found that for conditions representative of South San Francisco Bay, numerical simulations only allowed for bloom development when the water column was stratified and when minimal mixing was prescribed in the upper layer. Stratification, however, itself is not sufficient to ensure that a bloom will develop: minimal wind stirring is a further prerequisite to bloom development in shallow turbid estuaries with abundant populations of benthic suspension feeders.

Journal of Marine Research↗
USGS2024

Seabirds and humpback whales give early warning to marine heatwaves

Between 2014 and 2016, an extreme marine heatwave struck the North Pacific Ocean, affecting nearshore and pelagic (offshore, open ocean) ecosystems from southern California to Alaska. This unprecedented event, characterized by unusually warm ocean temperatures over a large area, was the longest-duration marine heatwave recorded to date. The Gulf of Alaska endured some of the most severe consequences of this heatwave, now known as the Pacific Marine Heatwave or “the Blob” (Fig. 1). Marine heatwaves, like the Blob, are increasing in frequency and intensity over time, and they can cause large-scale disruptions to marine ecosystems. The increased occurrence of these events across the world's oceans in recent decades necessitates an understanding of their impact on biological communities.

Open Access Government↗
USGS2013

A conceptual framework for Lake Michigan coastal/nearshore ecosystems, with application to Lake Michigan Lakewide Management Plan (LaMP) objectives

The Lakewide Management Plans (LaMPs) within the Great Lakes region are examples of broad-scale, collaborative resource-management efforts that require a sound ecosystems approach. Yet, the LaMP process is lacking a holistic framework that allows these individual actions to be planned and understood within the broader context of the Great Lakes ecosystem. In this paper we (1) introduce a conceptual framework that unifies ideas and language among Great Lakes managers and scientists, whose focus areas range from tributary watersheds to open-lake waters, and (2) illustrate how the framework can be used to outline the geomorphic, hydrologic biological, and societal processes that underlie several goals of the Lake Michigan LaMP, thus providing a holistic and fairly comprehensive roadmap for tackling these challenges. For each selected goal, we developed a matrix that identifies the key ecosystem processes within the cell for each lake zone and each discipline; we then provide one example where a process is poorly understood and a second where a process is understood, but its impact or importance is unclear. Implicit in these objectives was our intention to highlight the importance of the Great Lakes coastal/nearshore zone. Although the coastal/nearshore zone is the important linkage zone between the watershed and open-lake zones—and is the zone where most LaMP issues are focused--scientists and managers have a relatively poor understanding of how the coastal/nearshore zone functions. We envision follow-up steps including (1) collaborative development of a more detailed and more complete conceptual model of how (and where) identified processes are thought to function, and (2) a subsequent gap analysis of science and monitoring priorities.

Lake Michigan↗
USGS2012

Advancing global marine biogeography research with open-source GIS software and cloud-computing

Across many scientific domains, the ability to aggregate disparate datasets enables more meaningful global analyses. Within marine biology, the Census of Marine Life served as the catalyst for such a global data aggregation effort. Under the Census framework, the Ocean Biogeographic Information System was established to coordinate an unprecedented aggregation of global marine biogeography data. The OBIS data system now contains 31.3 million observations, freely accessible through a geospatial portal. The challenges of storing, querying, disseminating, and mapping a global data collection of this complexity and magnitude are significant. In the face of declining performance and expanding feature requests, a redevelopment of the OBIS data system was undertaken. Following an Open Source philosophy, the OBIS technology stack was rebuilt using PostgreSQL, PostGIS, GeoServer and OpenLayers. This approach has markedly improved the performance and online user experience while maintaining a standards-compliant and interoperable framework. Due to the distributed nature of the project and increasing needs for storage, scalability and deployment flexibility, the entire hardware and software stack was built on a Cloud Computing environment. The flexibility of the platform, combined with the power of the application stack, enabled rapid re-development of the OBIS infrastructure, and ensured complete standards-compliance.

Transactions in GIS↗
USGS2006

Anguilliform larvae collected off North Carolina

The distinctive larval stage of eels (leptocephalus) facilitates dispersal through prolonged life in the open ocean. Leptocephali are abundant and diverse off North Carolina, yet data on distributions and biology are lacking. The water column (from surface to 1,293 m) was sampled in or near the Gulf Stream off Cape Hatteras, Cape Lookout, and Cape Fear, North Carolina during summer through fall of 1999-2005, and leptocephali were collected by neuston net, plankton net, Tucker trawl, and dip net. Additional samples were collected nearly monthly from a transect across southern Onslow Bay, North Carolina (from surface to 91 m) from April 2000 to December 2001 by bongo and neuston nets, Methot frame trawl, and Tucker trawl. Overall, 584 tows were completed, and 224 of these yielded larval eels. The 1,295 eel leptocephali collected (combining all methods and areas) represented at least 63 species (nine families). Thirteen species were not known previously from the area. Dominant families for all areas were Congridae (44% of individuals, 11 species), Ophichthidae (30% of individuals, 27 species), and Muraenidae (22% of individuals, ten species). Nine taxa accounted for 70% of the overall leptocephalus catches (in order of decreasing abundance): Paraconger caudilimbatus (Poey), Gymnothorax ocellatus Agassiz complex, Ariosoma balearicum (Delaroche), Ophichthus gomesii (Castelnau), Callechelys muraena Jordan and Evermann, Letharchus aliculatus McCosker, Rhynchoconger flavus (Goode and Bean), Ophichthus cruentifer (Goode and Bean), Rhynchoconger gracilior (Ginsburg). The top three species represented 52% of the total eel larvae collected. Most leptocephali were collected at night (79%) and at depths > 45 m. Eighty percent of the eels collected in discrete depth Tucker trawls at night ranged from mean depths of 59-353 m. A substantial number (38% of discrete depth sample total) of larval eels were also collected at the surface (neuston net) at night. Daytime leptocephalus distributions were less clear partly due to low catches and lower Tucker trawl sampling effort. While net avoidance may account for some of the low daytime catches, an alternative explanation is that many species of larval eels occur during the day at depths > 350 m. Larvae of 21 taxa of typically shallow water eels were collected at depths > 350 m, but additional discrete depth diel sampling is needed to resolve leptocephalus vertical distributions. The North Carolina adult eel fauna (estuary to at least 2,000 m) consists of 51 species, 41% of which were represented in these collections. Many species of leptocephali collected are not yet known to have juveniles or adults established in the South Atlantic Bight or north of Cape Hatteras. Despite Gulf Stream transport and a prolonged larval stage, many of these eel leptocephali may not contribute to their respective populations. ?? 2006 Springer-Verlag.

Marine Biology↗
USGS2017

Sampling uncharted waters: Examining rearing habitat of larval Longfin Smelt (Spirinchus thaleichthys) in the upper San Francisco Estuary

The southern-most reproducing Longfin Smelt population occurs in the San Francisco Estuary, California, USA. Long-term monitoring of estuarine habitat for this species has generally only considered deep channels, with little known of the role shallow waters play in supporting their early life stage. To address the need for focused research on shallow-water habitat, a targeted study of Longfin Smelt larvae in littoral habitat was conducted to identify potential rearing habitats during 2013 and 2014. Our study objectives were to (1) determine if larval densities vary between littoral habitats (tidal slough vs. open-water shoal), (2) determine how larval densities in littoral habitats vary with physicochemical and biological attributes, (3) determine if larval densities vary between littoral habitats and long-term monitoring channel collections, and (4) determine what factors predict larval rearing distributions from the long-term monitoring channel collections. Larval densities did not vary between littoral habitats but they did vary between years. Water temperature, salinity, and chlorophyll a were found important in predicting larval densities in littoral habitats. Larval densities do not vary between littoral and channel surveys; however, the analysis based on channel data suggests that Longfin Smelt are hatching and rearing in a much broader region and under higher salinities (∼2–12 psu) than previously recognized. Results of this study indicate that conservation efforts should consider how freshwater flow, habitat, climate, and food webs interact as mechanisms that influence Longfin Smelt recruitment in estuarine environments.

California↗
USGS2021

Hydrographic and benthic mapping—St. Croix National Scenic Riverway—Osceola landing

High-resolution topographic and bathymetric mapping can assist in the analysis of river habitat. The National Park Service has been planning to relocate a boat ramp along the St. Croix River in Minnesota, across the river from the town of Osceola, Wisconsin, to improve visitor safety, improve operations for commercial use, enhance the overall visitor experience, and eliminate deferred maintenance at the landing. This landing grants access to the St. Croix River, which is a part of the National Park Service St. Croix National Scenic Riverway. Hydrographic and topographic surveys were needed to determine where the new location should be. The objective for these surveys was to provide baseline information in order to assess the direct effects of the landing relocation on physical habitat in areas adjacent to Osceola, Wisconsin. The study area for these surveys was about 18.5 hectares and located directly off the existing landing. Although the existing boat launch is referred to as the Osceola landing, it is located on the Minnesota side of the river and is the busiest National Park Service landing on the St. Croix River (National Park Service St. Croix National Scenic Riverway, 2020). This report documents methods and results of aquatic benthic mapping in a small area of the St. Croix River. The hydroacoustic and topographic surveys were collected from October 16–17, 2019. The hydrographic surveys consisted of multibeam and sidescan sound navigation and ranging (sonars). The topographic shoreline survey consisted of light detection and ranging (lidar) captured by boat adjacent to riverbanks. Additionally, an acoustic Doppler current profiler was used to measure flow velocities. The water level was higher than normal, and therefore had faster flow during the hydroacoustic surveys. Multibeam, lidar, and sidescan surveys occurred the first day, and the velocity mapping and ground truthing was conducted the second day. Multibeam and lidar provided derivative datasets that included bathymetry and a topobathy with a spatial resolution of 1 foot. From these data, additional data could be measured including slope and terrain ruggedness. Sidescan (acoustic reflectance measures) provided imagery that was used to help with interpretation of the river bottom. Outcomes from these combined datasets were substrate and bedform maps. Much of the area was covered in sand ripples or small dunes. A small area running adjacent to the deeper valley or cut down the river consisted of harder substrates, such as cobble and gravel. Large woody debris piles were found throughout the study area. Multiple stationary moving-bed tests were completed, and no corrections were recommended for the conditions occurring during survey. Mussel presence was noted in some of the underwater videos. The physical parameters of depth, flow, bedforms, and substrate derived from the datasets provided baseline measures for a benthic habitat map. Further analysis of benthic habitat might be possible with additional biological and chemical data.

Wisconsin↗
USGS1980

Analyses of water and dredged material from selected southern Louisiana waterways and selected areas in the Gulf of Mexico, 1976-78

The U.S. Geological Survey was requested by the U.S. Army Corps of Engineers to provide water-quality data to evaluate the potential environmental effects of (1) dredging activities in selected navigable waterways of southern Louisiana and (2) the disposal of dredged material at selected areas in the Gulf of Mexico. Areas studied from September 1976 to May 1978 included five ocean disposal sites in the Gulf of Mexico, in addition to the following waterways: Baptiste, Collette Bayou, Mississippi River at Head of Passes and Southwest Pass, Mississippi River at Tiger Pass, Bayou Black, Intracoastal Waterway (Port Allen to Morgan City), and Calcasieu River and Ship Channel. Samples were analyzed for selected chemical, physical, and biological constituents. (USGS)

Open-File Report↗
USGS1982

Procedures for assessment of cumulative impacts of coal mining on the hydrologic balance

Techniques were developed to assess the probable cumulative impacts of anticipated surface mining upon the hydrology of and area. An activity profile of cumulative drainage area versus river miles downstream from the surface mining site is constructed that shows major water uses, flood prone areas, and stream classifications. From the summary shown by the activity profile, an impact matrix is used as a checklist for the importance of the impacts under categories such as water supply, flood prone areas, water contact recreation, etc. Based on the categories checked on the impact matrix, a simple, less accurate model or a more comprehensive and accurate one can be used to quantify the impacts. Quantified impacts are then displayed on an impact profile showing the percentage change in a hydrologic characteristic versus distance downstream of the surface mining site. The simple model for quantification considers only dilution from tributary areas during critical periods whereas the comprehensive model routes flows and quality of water continuously through the year and considers, in addition to dilution, instream processes such as settling, biological uptake , and chemical reactions. (USGS)

Open-File Report↗