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Field Assessment of Acoustic-Doppler Based Discharge Measurements

The use of equipment based on the Doppler principle for measuring water velocity and computing discharge is common within the U.S. Geological Survey (USGS). The instruments and software have changed appreciably during the last 5 years; therefore, the USGS has begun a field validation of the instruments currently (2002) available for making discharge measurements from a moving boat in streams of various sizes. Instruments manufactured by SonTek/YSI2 and RD Instruments, Inc. were used to collect discharge data at five different sites. One or more traditional discharge measurements were made by the use of a Price AA current meter and standard USGS procedures with the acoustic instruments at each site during data collection. The discharges measured with the acoustic instruments were compared with the discharges measured with Price AA meters and the current USGS stage-discharge rating for each site. The mean discharges measured by each acoustic instrument were within 5 percent of the Price AA-based measurement and (or) discharge from the stage-discharge rating. Additional analysis of the data collected indicates that the coefficient of variation of the discharge measurements consistently was less for the RD Instruments, Inc. Rio Grandes than it was for the SonTek/YSI RiverSurveyors. The bottom-tracking referenced measurement had a lower coefficient of variation than the differentially corrected global positioning system referenced measurements. It was observed that the higher frequency RiverSurveyors measured a moving bed more often than the lower frequency Rio Grandes. The detection of a moving bed caused RiverSurveyors to be consistently biased low when referenced to bottom tracking. Differentially corrected global positioning system data may be used to remove the bias observed in the bottom-tracking referenced measurements.

Conference Paper

Geohydrology and water quality of the unconsolidated deposits in Erie County, Pennsylvania

Water in unconsolidated deposits is used for the water supplies of homes, farms, municipalities, and industries in Erie County. The unconsolidated deposits cover most of the bedrock of Erie County. Thickness of the unconsolidated deposits ranged from 60 to 400 feet at 30 sites surveyed by seismic refraction and reflection methods. Water wells, mostly in the unconsolidated deposits, provide adequate domestic supplies. Wells in fractured bedrock can generally provide small domestic supplies; however, droughts can affect some of the domestic water wells. Ground-water withdrawals accounted for 10 million gallons per day of the water used in Erie County in 1984. Mean annual precipitation ranged from 42 to 47 inches per year in Erie County from 1961 through 1990; the southeastern region of the county generally receives more precipitation than the lake shore region to the north. Overland runoff to three segments of the French Creek watershed in the upland area ranged from about 13 to 19 in. per year and base flow ranged from 14 to about 18 in. per year from 1975 to 1992. Evapotranspiration ranged from about 13 to 16 in. per year for those segments. Beach and outwash deposits generally provide the largest supplies of water to wells in Erie County. A median specific capacity of 17 (gal/min)/ft (gallons per minute per foot) of drawdown was determined from records of nondomestic wells in beach deposits and 9 (gal/min)/ft of drawdown in outwash. Mean specific capacity for wells in till deposits was 1.5 (gal/min)/ft. The range in yield and specific capacity, however, was great for the unconsolidated deposits and high yielding outwash deposits are sometimes difficult to locate beneath till and valley-fill deposits. Hydraulic conductivities from three aquifer tests of outwash deposits (sand and gravel) at separate sites ranged from 110 to 2,030 ft/d (feet per day). Hydraulic conductivities from another aquifer test of sand and silt in the water table at Presque Isle ranged from 120 to 215 ft/d. Transmissivities from a third aquifer test of beach sand and gravel ranged from 235 to 262 feet squared per day. Laboratory analyses of stream samples collected during base flows in 1987 and 1988 indicate that concentrations of arsenic, barium, cadmium, chromium, fluoride, lead, mercury, and selenium did not exceed the maximum contaminant levels (MCL's) established for drinking water by the U.S. Environmental Protection Agency (USEPA). Concentrations of two nontoxic elements, iron and manganese, exceeded USEPA secondary maximum contaminant levels (SMCL's) in samples from selected stream sites. Manganese concentrations exceeded the SMCL of 0.05 milligrams per liter at 19 of 30 stream sites sampled in the Upland Plateau Section of Erie County. Twenty-one wells were sampled for inorganic constituents and selected pesticides. Some samples from three of the wells exceeded the MCL for nitrate. Total arsenic concentrations above the MCL of 50 micrograms per liter were documented intermittently in three water wells in North East Township. Water from six of seven tile drains sampled in agricultural fields contained detectable concentrations of herbicides. These samples document the transport of the herbicides from the shallow ground-water system to local streams. Herbicide concentrations were at or more than minimum reporting levels for atrazine, cyanazine, prometone, and simazine. Atrazine concentrations in all seven samples from tile drains did not exceed the USEPA MCL of 3.0 micrograms per liter.

Water-Resources Investigations Report

Field and laboratory evaluations of visible light as a cue for guiding downstream-migrating juvenile Sea Lamprey

Objective We evaluated white light as a potential guidance cue for juvenile Sea Lamprey Petromyzon marinus in a natural setting as well as the effect of water velocity (0.25-, 0.50-, 0.75-, and 1.0-m/s test velocities) on light guidance behavior in a controlled laboratory flume, and characterized emigration timing and movement rates in a small stream (∼10 m wide and 0.7 m deep). Methods Behaviors and rates of downstream movement were monitored using PIT telemetry in both studies. Results In the field study, downstream movement by juveniles released during October 30–November 27 appeared to be cued by precipitation-induced flow events when water temperatures ranged between 4°C and 8°C. Juveniles expressed lateral attraction to a short, bank-mounted linear light array, but the guidance effect was not strong or consistent between bank light locations. Downstream movement rates decreased slightly when juveniles were exposed to the light cue. In the laboratory flume experiment, at water velocities of 0.25 and 0.75 m/s, lamprey were 2.8 and 3.3 times more likely to be detected at antennas along a wall with a linear light array compared with other antennas across the width of the flume. Significant changes in distribution were detected farther upstream in the flume during 0.25- and 0.50-m/s water velocity trials compared with 0.75-m/s trials. Further, the rate of downstream movement through the length of the flume decreased under artificial lighting compared with dark controls under the 0.25- and 0.75-m/s velocity conditions. Conclusions The results suggest lamprey exhibit a behavioral response to the light cue in both lab and field, but water velocity influences how effectively juveniles can respond to light cues.

Massachusetts

U.S. Geological Survey response to Hurricane Maria flooding in Puerto Rico and characterization of peak streamflows observed September 20–22, 2017

Hurricane Maria struck the island of Puerto Rico on September 20, 2017, as a Category 4 storm. The hurricane traversed the island from southeast to northwest and produced recorded 48-hour rainfall totals of up to 30.01 inches. Estimates of the human death toll range from 2,975 to 4,645, possibly more. The U.S. Geological Survey (USGS) hydrologic monitoring network sustained substantial wind and flood damage during the hurricane. Eighty-five of the 300 hydrologic monitoring stations operating in Puerto Rico and the U.S. Virgin Islands prior to the passage of Hurricane Maria were destroyed or damaged. During the weeks and months after the hurricane, USGS field crews in Puerto Rico prioritized repair of the hydrologic monitoring network and collected hydrologic information to characterize the magnitude of observed peak streamflows at 20 streamgage and to develop new theoretical stage-streamflow relations for 58 streamgages where stream channels were substantially altered; the theoretical stage-streamflow relations were used to estimate Hurricane Maria peak streamflows for 39 of those sites. As part of a pilot program, USGS field crews installed continuous slope-area monitoring equipment at two remote streamgages to automate the collection of high-streamflow stage data. Hurricane Maria peak streamflows and rankings were determined for 73 USGS streamgages in Puerto Rico. New rank 1 period-of-record peak streamflows occurred at 28 sites, rank 2 period-of-record peak streamflows occurred at 17 sites, and rank 3 period-of-record peak streamflows occurred at 9 sites; period-of-record peak streamflows at the remaining 19 sites either ranked from 4th to 20th or were not ranked. Annual exceedance probabilities for 53 unregulated peak streamflows ranged from greater than 50.0 percent (recurrence interval of less than 2 years) to 0.3 percent (recurrence interval of 333 years), with the majority (28 of 53) in the range of 10.0–2.1 percent (recurrence intervals of 10–48 years). A comparison of period-of-record ranks for the largest flood events that have occurred in Puerto Rico since the 1960s indicated that Hurricane Maria produced more record peak streamflows than either Hurricane Hortense in 1996 or Hurricane Georges in 1998. Limited pre-1960s hydrologic data preclude quantitative comparison with earlier storms. As part of this study, a maximum peak-streamflow envelope curve for Puerto Rico was developed using historical peak-streamflow information available through 2017. Other post-Hurricane Maria USGS activities summarized in this report include (1) Global Navigation Satellite System surveys at all stations in the USGS hydrologic monitoring network, used to tie the network to the Puerto Rico Vertical Datum of 2002; and (2) telemetered monitoring of the Lago Guajataca Dam in northwestern Puerto Rico, which was damaged and at risk of failure from October to December 2017.

Puerto Rico

Regional bankfull-channel dimensions of non-urban wadeable streams in Indiana

During floods, damage to properties and community infrastructure may result from inundation and the processes of erosion. The damages imparted by erosion are collectively termed the fluvial erosion hazard (FEH), and the Indiana Silver Jackets Multi-agency Hazard Mitigation Taskforce is supporting a program to build tools that will assist Indiana property owners and communities with FEH-mitigation efforts. As part of that program, regional channel-dimension relations are identified for non-urban wadeable streams in Indiana. With a site-selection process that targeted the three largest physiographic regions of the state, field work was completed to measure channel-dimension and channel-geometry characteristics across Indiana. In total, 82 sites were identified for data collection; 25 in the Northern Moraine and Lake region, 31 in the Central Till Plain region, and 26 in the Southern Hills and Lowlands region. Following well established methods, for each data-collection site, effort was applied to identify bankfull stage, determine bankfull-channel dimensions, and document channel-geometry characteristics that allowed for determinations of channel classification. In this report, regional bankfull-channel dimension results are presented as a combination of plots and regression equations that identify the relations between drainage area and the bankfull-channel dimensions of width, mean depth, and cross-sectional area. This investigation found that the channel-dimension data support independent relations for each of the three physiographic regions noted above. Furthermore, these relations show that, for any given drainage area, northern Indiana channels have the smallest predicted dimensions, southern Indiana channels have the largest predicted dimensions, and central Indiana channels are intermediate in their predicted dimensions. When considering the suite of variables that influence bankfull-channel dimensions, it appears that contrasting runoff characteristics between the three physiographic regions may explain much of the inequality observed in the measured channel dimensions. While this investigation targeted non-urban wadeable streams in Indiana, site conditions prevented data collection in some areas. Therefore, application of the results of this study always should include knowledge gained from local observations.

Indiana

Development and evaluation of habitat suitability criteria for native fishes in three Arizona streams

Habitat loss is a main contributor to fish fauna declines in the southwestern USA. Several studies have defined stream-specific habitat conditions that support the growth and survival of native fish in Arizona to inform stream restoration efforts, yet general habitat use of most individual species across the region is not established. Therefore, we evaluated habitat use of four native fishes, Speckled Dace Rhinichthys osculus , Sonora Sucker Catostomus insignis , Desert Sucker Catostomus clarkii , and Longfin Dace Agosia chrysogaster , across three Arizona streams through the development of habitat suitability criteria (HSC). We developed both stream-specific and generalized HSC for each species. Generalized HSC were calculated as the combination of stream-specific HSC for each species. We then assessed the utility of generalized HSC through transferability among study streams. Also, past HSC studies have not considered the occurrence of nonnative species, so we tested whether the presence of nonnative fishes influenced native fish habitat use through logistic regression models. Fish and habitat data were collected along the Mogollon Rim in Arizona during the 2017 summer field season at base flow conditions. We established minimum microhabitat use for four native Arizona fish species through developing HSC. Most generalized criteria did not transfer among study streams due to variation in habitat availability and fish community structure. Logistic regression analysis showed that the presence of nonnative fishes was inversely related to the presence of two native fish species, which could have influenced habitat use of both species. The lack of transferability across streams as demonstrated in this study confirms that only HSC developed in the stream of interest or in similar undegraded streams with comparable fish communities should be used for restoration efforts. For projects to restore native fishes in streams where nonnative competitors will not dominate, the least degraded similar streams without coexisting nonnative fishes can guide restoration efforts.

Arizona

Evaluation of Measurements Collected with Multi-Parameter Continuous Water-Quality Monitors in Selected Illinois Streams, 2001-03

Eight streams, representing a wide range of environmental and water-quality conditions across Illinois, were monitored from July 2001 to October 2003 for five water-quality parameters as part of a pilot study by the U.S. Geological Survey (USGS) in cooperation with the Illinois Environmental Protection Agency (IEPA). Continuous recording multi-parameter water-quality monitors were installed to collect data on water temperature, dissolved-oxygen concentrations, specific conductivity, pH, and turbidity. The monitors were near USGS streamflow-gaging stations where stage and streamflow are continuously recorded. During the study period, the data collected for these five parameters generally met the data-quality objectives established by the USGS and IEPA at all eight stations. A similar pilot study during this period for measurement of chlorophyll concentrations failed to achieve the data-quality objectives. Of all the sensors used, the temperature sensors provided the most accurate and reliable measurements (generally within ?5 percent of a calibrated thermometer reading). Signal adjustments and calibration of all other sensors are dependent upon an accurate and precise temperature measurement. The dissolved-oxygen sensors were the next most reliable during the study and were responsive to changing conditions and accurate at all eight stations. Specific conductivity was the third most accurate and reliable measurement collected from the multi-parameter monitors. Specific conductivity at the eight stations varied widely-from less than 40 microsiemens (?S) at Rayse Creek near Waltonville to greater than 3,500 ?S at Salt Creek at Western Springs. In individual streams, specific conductivity often changed quickly (greater than 25 percent in less than 3 hours) and the sensors generally provided good to excellent record of these variations at all stations. The widest range of specific-conductivity measurements was in Salt Creek at Western Springs in the Greater Chicago metropolitan area. Unlike temperature, dissolved oxygen, and specific conductivity that have been typically measured over a wide range of historical streamflow conditions in many streams, there are few historical turbidity data and the full range of turbidity values is not well known for many streams. Because proposed regional criteria for turbidity in regional streams are based on upper 25th percentiles of concentration in reference streams, accurate determination of the distribution of turbidity in monitored streams is important. Digital data from all five sensors were recorded within each of the eight sondes deployed in the streams and in automated data recorders in the nearby streamflow-gaging houses at each station. The data recorded on each sonde were retrieved to a field laptop computer at each station visit. The feasibility of transmitting these data in near-real time to a central processing point for dissemination on the World-Wide Web was tested successfully. Data collected at all eight stations indicate that a number of factors affect the dissolved-oxygen concentration in the streams and rivers monitored. These factors include: temperature, biological activity, nutrient runoff, and weather (storm runoff). During brief periods usually in late summer, dissolved-oxygen concentrations in half or more of the eight streams and rivers monitored were below the 5 milligrams per liter minimum established by the Illinois Pollution Control Board to protect aquatic life. Because the streams monitored represent a wide range in water-quality and environmental conditions, including diffuse (non-point) runoff and wastewater-effluent contributions, this result indicates that deleterious low dissolved-oxygen concentrations during late summer may be widespread in Illinois streams.

Scientific Investigations Report

Determining travel time and stream mixing using tracers and empirical equations

Water-supply managers need adequate warning to protect water supplies if a contaminant is spilled in an upgradient tributary. The city of Lincoln draws water from alluvium associated with the Platte River near Ashland, eastern Nebraska. Using constant-rate injection methods and a conservative tracer, travel time and degree of mixing of contaminants in the Elkhorn and Platte Rivers were evaluated in 1995 and 1996. The results indicate that, for flows of 584 to 162 m 3 /s in the Platte River at Ashland with 13 to 28% of its flow contributed by the Elkhorn River, 8.2 to 13.2 h are required for the leading edge of a chemical plume to travel from the Elkhorn River at Waterloo to the Platte River at Ashland. The peak concentration of a chemical spilled as a slug in the Elkhorn River near Waterloo would pass the well field after 11.3 to 16.1 h. Existing empirical equations for calculation of travel time were shown to apply to reaches of streams studied, but underestimated the leading edge up to 14% and overestimated the plateau concentration up to 11% at Site 5. However, time of travel may be influenced by the relative contribution of a tributary. The plateau concentration of the chemical in the Platte River at Ashland was 45 to 60% of its concentration in the Elkhorn River. The degree of mixing of the tracer in the Platte River at Ashland increased from 53 to 65% as the relative contribution of the Elkhorn River increased.

Journal of Environmental Quality

Importance of a stochastic distribution of floods and erosion thresholds in the bedrock river incision problem

Fluvial erosion of bedrock occurs during occasional flood events when boundary shear stress exceeds a critical threshold to initiate incision. Therefore efforts to model the evolution of topography over long timescales should include an erosion threshold and should be driven by a stochastic distribution of erosive events. However, most bedrock incision models ignore the threshold as a second‐order detail. In addition, climate is poorly represented in most landscape evolution models, so the quantitative relationship between erosion rate and measurable climatic variables has been elusive. Here we show that the presence of an erosion threshold, when combined with a well‐constrained, probabilistic model of storm and flood occurrence, has first‐order implications for the dynamics of river incision in tectonically active areas. First, we make a direct calculation of the critical shear stress required to pluck bedrock blocks for a field site in New York. Second, we apply a recently proposed stochastic, threshold, bedrock incision model to a series of streams in California, with known tectonic and climatic forcing. Previous work in the area has identified a weak relationship between channel gradient or relief and rock uplift rate that is not easily explained by simpler detachment‐limited models. The results with the stochastic threshold model show that even low erosion thresholds, which are exceeded in steep channels during high‐frequency flood events, fundamentally affect the predicted relationship between gradient and uplift rate in steady state rivers, in a manner consistent with the observed topography. This correspondence between theory and data is, however, nonunique; models in which a thin alluvial cover may act to inhibit channel incision in the low uplift rate zone also provide plausible explanations for the observed topography. Third, we explore the broader implications of the stochastic threshold model to the development of fluvial topography in active tectonic settings. We suggest that continued field applications of geomorphic models, including physically meaningful thresholds and stochastic climate distributions, are required to advance our knowledge of interactions among surficial, climatic, and crustal processes.

California

Occurrence and temporal variability of methyl tert -butyl ether (MTBE) and other volatile organic compounds in select sources of drinking water : results of the focused survey

The large-scale use of the gasoline oxygenate methyl tert -butyl ether (MTBE), and its high solubility, low soil adsorption, and low biodegradability, has resulted in its detection in ground water and surface water in many places throughout the United States. Studies by numerous researchers, as well as many State and local environmental agencies, have discovered high levels of MTBE in soils and ground water at leaking underground gasoline-storage-tank sites and frequent occurrence of low to intermediate levels of MTBE in reservoirs used for both public water supply and recreational boating. In response to these findings, the American Water Works Association Research Foundation sponsored an investigation of MTBE and other volatile organic compounds (VOCs) in the Nation's sources of drinking water. The goal of the investigation was to provide additional information on the frequency of occurrence, concentration, and temporal variability of MTBE and other VOCs in source water used by community water systems (CWSs). The investigation was completed in two stages: (1) reviews of available literature and (2) the collection of new data. Two surveys were associated with the collection of new data. The first, termed the Random Survey, employed a statistically stratified design for sampling source water from 954 randomly selected CWSs. The second, which is the focus of this report, is termed the Focused Survey, which included samples collected from 134 CWS source waters, including ground water, reservoirs, lakes, rivers, and streams, that were suspected or known to contain MTBE. The general intent of the Focused Survey was to compare results with the Random Survey and provide an improved understanding of the occurrence, concentration, temporal variability, and anthropogenic factors associated with frequently detected VOCs. Each sample collected was analyzed for 66 VOCs, including MTBE and three other ether gasoline oxygenates (hereafter termed gasoline oxygenates). As part of the Focused Survey, 451 source-water samples and 744 field quality-control (QC) samples were collected from 78 ground-water, 39 reservoir and (or) lake, and 17 river and (or) stream source waters at fixed intervals for a period of 1 year. Using a common assessment level of 0.2 μg/L (micrograms per liter) (2.0 μg/L for methyl ethyl ketone), 37 of the 66 VOCs analyzed were detected in both surveys. However, VOCs, especially MTBE and other gasoline oxygenates, were detected more frequently in the Focused Survey than in the Random Survey. MTBE was detected in 55.5 percent of the CWSs sampled in the Focused Survey and in 8.7 percent of those sampled in the Random Survey. Little difference in occurrence, however, was observed for trihalomethanes (THMs), which were detected in 16.4 and 14.8 percent of Focused Survey and Random Survey CWSs, respectively. This may indicate a pervasive occurrence of THMs in several source-water types, regardless of CWS size or geographic location. Using data at or above the method detection limit to assess temporal variability and anthropogenic factors associated with frequent detection of select VOCs, concentrations in the Focused Survey in ground-water, reservoir, and river source waters were typically less than 1 μg/L. Also, at a 95-percent confidence interval, no statistically significant differences were observed in comparing concentrations in the first and second ground-water sample. A weak seasonal pattern was observed in samples collected from reservoirs and lakes where gasoline oxygenates and other gasoline compounds were detected more frequently during spring and summer, presumedly a result of increased use of motorized watercraft during these seasons. In contrast, seasonal patterns were not observed in samples collected from rivers and streams. The lack of seasonal differences in river and stream source waters sampled may indicate a common and continuous source of contamination. The most frequently detected VOC (MTBE) and the two most frequently occurring subgroups of VOCs (gasoline oxygenates and THMs) detected in CWS source waters were further characterized to evaluate some anthropogenic factors that may better explain their frequent occurrence. Gasoline oxygenates were detected in 73.9 percent of all CWSs sampled. The concentration of gasoline oxygenates was slightly correlated with watercraft use on reservoirs inside MTBE high-use areas (r2=0.3783) but not outside of these areas (r2=0.0242). In general, the concentration of gasoline oxygenates increased as watercraft use increased. THMs were detected in 47.8 percent of the CWSs supplied by surface water. The frequent occurrence of THMs in reservoir source waters was determined to be an artifact of disinfection and the recycling of chlorinated water to these reservoirs. All CWSs with frequent occurrence of THMs served by a reservoir indicated that chlorine was added to waters for various reasons and that the chlorinated water was then released back to, or upstream of, the reservoir or lake that was sampled.

Water-Resources Investigations Report

Effects of Abandoned Coal-Mine Drainage on Streamflow and Water Quality in the Mahanoy Creek Basin, Schuylkill, Columbia, and Northumberland Counties, Pennsylvania, 2001

This report assesses the contaminant loading, effects to receiving streams, and possible remedial alternatives for abandoned mine drainage (AMD) within the Mahanoy Creek Basin in east-central Pennsylvania. The Mahanoy Creek Basin encompasses an area of 157 square miles (407 square kilometers) including approximately 42 square miles (109 square kilometers) underlain by the Western Middle Anthracite Field. As a result of more than 150 years of anthracite mining in the basin, ground water, surface water, and streambed sediments have been adversely affected. Leakage from streams to underground mines and elevated concentrations (above background levels) of acidity, metals, and sulfate in the AMD from flooded underground mines and (or) unreclaimed culm (waste rock) degrade the aquatic ecosystem and impair uses of the main stem of Mahanoy Creek from its headwaters to its mouth on the Susquehanna River. Various tributaries also are affected, including North Mahanoy Creek, Waste House Run, Shenandoah Creek, Zerbe Run, and two unnamed tributaries locally called Big Mine Run and Big Run. The Little Mahanoy Creek and Schwaben Creek are the only major tributaries not affected by mining. To assess the current hydrological and chemical characteristics of the AMD and its effect on receiving streams, and to identify possible remedial alternatives, the U.S. Geological Survey (USGS) began a study in 2001, in cooperation with the Pennsylvania Department of Environmental Protection and the Schuylkill Conservation District. Aquatic ecological surveys were conducted by the USGS at five stream sites during low base-flow conditions in October 2001. Twenty species of fish were identified in Schwaben Creek near Red Cross, which drains an unmined area of 22.7 square miles (58.8 square kilometers) in the lower part of the Mahanoy Creek Basin. In contrast, 14 species of fish were identified in Mahanoy Creek near its mouth at Kneass, below Schwaben Creek. The diversity and abundance of fish species in Mahanoy Creek decreased progressively upstream from 13 species at Gowen City to only 2 species each at Ashland and Girardville. White sucker (Catostomus commersoni), a pollution-tolerant species, was present at each of the surveyed reaches. The presence of fish at Girardville was unexpected because of the poor water quality and iron-encrusted streambed at this location. Generally, macroinvertebrate diversity and abundance at these sites were diminished compared to Schwaben Creek and other tributaries draining unmined basins, consistent with the observed quality of streamwater and streambed sediment. Data on the flow rate and chemistry for 35 AMD sources and 31 stream sites throughout the Mahanoy Creek Basin were collected by the USGS during high base-flow conditions in March 2001 and low base-flow conditions in August 2001. A majority of the base-flow streamwater samples met water-quality standards for pH (6.0 to 9.0); however, few samples downstream from AMD sources met criteria for acidity less than alkalinity (net alkalinity = 20 milligrams per liter as CaCO3) and concentrations of dissolved iron (0.3 milligram per liter) and total manganese (1.0 milligram per liter). Iron, aluminum, and various trace elements including cobalt, copper, lead, nickel, and zinc, were present in many streamwater samples at concentrations at which continuous exposure can not be tolerated by aquatic organisms without an unacceptable effect. Furthermore, concentrations of sulfate, iron, manganese, aluminum, and (or) beryllium in some samples exceeded drinking-water standards. Other trace elements, including antimony, arsenic, barium, cadmium, chromium, selenium, silver, and thallium, did not exceed water-quality criteria for protection of aquatic organisms or human health. Nevertheless, when considered together, concentrations of iron, manganese, arsenic, cadmium, chromium, copper, lead, nickel, and zinc in a majority of the streambed sediment samples from Mahanoy Creek and

Scientific Investigations Report

A targeted approach for mapping groundwater discharge to surface water and fish thermal refuge in four Lake Ontario tributaries

The duration, magnitude, and frequency of heatwaves are predicted to increase in the coming decades, a combination that can reduce the survival of many fish species. Across the world, there is broad interest in identifying thermal refuge for heat-intolerant fish species and exploring opportunities to enhance or protect these areas. Because deeper groundwater maintains a relatively constant temperature, groundwater-influenced areas along streams can provide cool-water refuge for fish during periods of extreme heat. A targeted approach was developed for identifying existing cold-water zones and areas of substantial groundwater discharge in four high priority Lake Ontario tributaries. Our approach included: (1) predicting where groundwater discharge is most likely with a simple geospatial model and (2) using model predictions to select field sites for intensive high-resolution study, including ground-based mapping of groundwater features (springs, seeps, tributaries) as well as drone-based optical and thermal infrared surveys. Results from field sites were used to both verify model performance and map different types and aerial extents of thermal anomalies. Geospatial modelling successfully predicted regions of widespread groundwater upwelling, later verified and mapped by field and drone surveys. Comparison of model and field survey results further highlighted specific geospatial layers, such as soil/bedrock types and topographic wetness index, as being particularly useful for predicting groundwater influence on streams in the study area. In addition, a comparison of geospatial model results with a model of fish abundances along the studied streams showed significant positive correlations for many heat-intolerant fish species over a wide geographic area. The approach developed in this study can be applied to other watersheds to highlight areas of probable groundwater discharge and could be used by fishery and water resource managers to support cold-water fish habitat management decision-making and resource conservation.

New York

Acute toxicity of an acid mine drainage mixing zone to juvenile bluegill and largemouth bass

The toxicity of an acid mixing zone produced at the confluence of a stream that was contaminated by acid mine drainage (AMD) and a pH-neutral stream was investigated in toxicity tests with juvenile bluegill Lepomis macrochirus and largemouth bass Micropterus salmoides. Fish mortalities in instream cages located in the mixing zone, below the mixing zone, and upstream in both tributaries were compared to determine relative toxicity at each site. In all tests and for both species, significantly higher mortality was observed in the mixing zone than at any other location, including the acid stream, which had lower pH (2.9-4.3). The mixing zone was defined chemically by rapid precipitation of dissolved aluminum and iron, which arrived from the low-pH stream, and by the presence of white precipitates, which were attached to the substratum and which extended below the confluence. Possible seasonal changes in mixing zone toxicity were investigated by conducting field tests with bluegill in June, July, and August 1996 and in January 1997 and by conducting field tests with largemouth bass in April and May 1997. Toxicity was not significantly different at the extremes of temperature, pH, and metal concentration that occurred in June and July, as compared with January. Toxicity was significantly lower in August; however, elevated stream discharge during the August test may have disturbed mixing zone characteristics. High toxicity in AMD mixing zones may lower the survival of fishes in streams, reduce available habitat, and impede movements of migratory fish.

Transactions of the American Fisheries Society

DOM composition in an agricultural watershed: assessing patterns and variability in the context of spatial scales

Willow Slough, a seasonally irrigated agricultural watershed in the Sacramento River valley, California, was sampled synoptically in order to investigate the extent to which dissolved organic carbon (DOC) concentrations and compositions from throughout the catchment are represented at the mouth. DOC concentrations ranged from 1.8 to 13.9 mg L −1 , with the lowest values in headwater 1st and 2nd order streams, and the highest values associated with flood irrigation. Carbon-normalized vanillyl phenols varied from 0.05 to 0.67 mg 100 mg OC −1 (0.37 mean), indicative of considerable contributions from vascular plants. DOC concentrations and compositions at the mouth appear to be primarily influenced by land use (agriculture) in the lower reaches, and therefore very little of the headwater chemistry (1st and 2nd order streams) can be discerned from the chemistry at or near the mouth (3rd and 4th order streams), indicating the need for synoptic sampling to capture the breadth of organic carbon cycling within a catchment. Field sampling during irrigation showed the large impact that flood irrigation can have on DOC concentrations and compositions, likely a primary cause of significantly elevated Willow Slough DOC concentrations during the summer irrigation season. Optical proxies exhibited varying degrees of correlation with chemical measurements, with strongest relationships to DOC and dissolved lignin ( r 2 = 0.95 and 0.73, respectively) and weaker relationships to carbon-normalized lignin yields and C:V ( r 2 from 0.31 to 0.42). Demonstrating the importance of matching scale to processes, we found no relationship between dissolved lignin concentrations and total suspended sediments (TSS) across all sites, in contrast to the strong relationship observed in weekly samples at the mouth. As DOC concentrations and compositions at the mouth of Willow Slough are closely tied to anthropogenic activities within the catchment, future changes in land-use driven by climate change, water availability, and economic pressures on crop types will also bring about changes in the overall biogeochemistry.

California

A policy evaluation tool: Management of a multiaquifer system using controlled stream recharge

A model for the optimal allocation of water resources was developed for a multiaquifer groundwater and surface water system near Livermore, California. The complex groundwater system was analyzed using a transient, quasi-three-dimensional model that considers the nonlinear behavior of the unconfined aquifer. The surface water system consists of a reservoir that discharges water to three streams which in turn recharge the upper aquifer. Nonlinear streamflow-recharge relationships were developed based upon synoptic field measurements of streamflow. The management model uses constrained optimization to minimize the cost of allocating surface water subject to physical and economic restrictions. Results indicate that a combined hydrologic and economic management model can be used to evaluate management practices of a complex hydrogeologic system. Questions can be posed which either would be impossible or extremely difficult to solve without the management model. We demonstrate the utility of such a model in three areas. First, the efficiency of intra-basin water allocations is evaluated. Second, critical factors that control management decisions of the basin are identified. Third, the influence of economic incentives that can best satisfy the conflicting objectives of various water users is explored.

Water Resources Research

Analytical Results for Agricultural Soils Samples from a Monitoring Program Near Deer Trail, Colorado (USA)

Since late 1993, Metro Wastewater Reclamation District of Denver (Metro District, MWRD), a large wastewater treatment plant in Denver, Colorado, has applied Grade I, Class B biosolids to about 52,000 acres of nonirrigated farmland and rangeland near Deer Trail, Colorado, USA. In cooperation with the Metro District in 1993, the U.S. Geological Survey (USGS) began monitoring groundwater at part of this site. In 1999, the USGS began a more comprehensive monitoring study of the entire site to address stakeholder concerns about the potential chemical effects of biosolids applications to water, soil, and vegetation. This more comprehensive monitoring program has recently been extended through 2010. Monitoring components of the more comprehensive study include biosolids collected at the wastewater treatment plant, soil, crops, dust, alluvial and bedrock groundwater, and stream bed sediment. Soils for this study were defined as the plow zone of the dry land agricultural fields - the top twelve inches of the soil column. This report presents analytical results for the soil samples collected at the Metro District farm land near Deer Trail, Colorado, during three separate sampling events during 1999, 2000, and 2002. Soil samples taken in 1999 were to be a representation of the original baseline of the agricultural soils prior to any biosolids application. The soil samples taken in 2000 represent the soils after one application of biosolids to the middle field at each site and those taken in 2002 represent the soils after two applications. There have been no biosolids applied to any of the four control fields. The next soil sampling is scheduled for the spring of 2010. Priority parameters for biosolids identified by the stakeholders and also regulated by Colorado when used as an agricultural soil amendment include the total concentrations of nine trace elements (arsenic, cadmium, copper, lead, mercury, molybdenum, nickel, selenium, and zinc), plutonium isotopes, and gross alpha and beta activity (Colorado Department of Public Health and Environment, Hazardous Materials and Waste Management Division, 1997; Colorado Department of Public Health and Environment,1998; U.S. Environmental Protection Agency, 1993). Since these were the identified priority parameters for the biosolids, the soils have the same set of priority parameters. Although the composite soils' priority analytes have been reported earlier to Metro District, the remaining elemental datasets for both the composite soils samples and selected fields' individual subsamples' data are presented here for the first time. More information about the other monitoring components is presented elsewhere in the literature (http://co.water.usgs.gov/projects/CO406/CO406.html). In general, the objective of each component of the study was to determine whether concentrations of priority parameters (1) were higher than regulatory limits, (2) were increasing with time, and(or) (3) were significantly higher in biosolids-applied areas than in a similar farmed area where biosolids were not applied. The method chosen for sampling the soils proved to be an efficient and reliable representation of the average composition of each field. This was shown by analyzing individual subsamples, averaging the resulting values, and then comparing the values to the composited samples' values. The soil chemistry shows distinct differences between the two sites, most likely due to the different underlying parent material. Biosolids data were used to compile an inorganic-chemical biosolids signature that can be contrasted with the geochemical signature of the agricultural soils for this site. The biosolids signature and an understanding of the geology and hydrology of the site can be used to separate biosolids effects from natural geochemical effects. Elements of particular interest for a biosolids signature after application in the soils include bismuth, copper, silver, mercury, and phosphorus. This signat

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