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At least 505 records · Page 28Linked to original sources
USGS2007

Tampa Bay as a model estuary for examining the impact of human activities on biogeochemical processes: an introduction

Tampa Bay is a shallow, Y-shaped coastal embayment that is located along the center of the Florida Platform – an expansive accumulation of Cretaceous–Tertiary shallow-water carbonates and evaporites that were periodically exposed during glacio–eustatic sea level fluctuations. As a consequence, extensive karstification likely had a controlling impact on the geologic evolution of Tampa Bay. Despite its large aerial size (∼ 1000 km 2 ), Tampa Bay is relatively shallow (mean depth = 4 m) and its watershed (6700 km 2 ) is among the smallest in the Gulf of Mexico. About 85% of all freshwater inflow (mean = 63 m 3 s -1 ) to the bay is carried by four principal tributaries (Orlando et al., 1993). Groundwater makes up an important component of baseflow of these coastal streams and may also be important in delivering nutrients and other constituents to the bay proper by submarine groundwater discharge.

Florida↗
USGS2006

Shallow-water pockmark formation in temperate estuaries: A consideration of origins in the western gulf of Maine with special focus on Belfast Bay

A systematic mapping program incorporating more than 5000 km of side scan sonar and seismic reflection tracklines in the western Gulf of Maine has identified more than 70 biogenic natural gas deposits, occupying 311 km 2 in nearshore muddy embayments. Many of these embayments also contain pockmark fields, with some exhibiting geologically active characteristics including the observance of plumes of escaping fluids and sediment. Pockmarks, hemispherically shaped depressions of various size and depths, formed through fluid escape of gas and/or pore water, are sometimes found within or outside gas fields, although many gas fields lack pockmarks altogether. Although the origin of the natural gas remains unclear, if coastal environments at times of lower sea level were similar to the present, numerous lake, wetland, valley fill and estuarine sources of organic-rich material may have formed on the inner shelf. If these deposits survived transgression and remain buried, they are potential gas sources. Intensive mapping of the Belfast Bay pockmark field in 1998 produced the first nearly continuous side scan sonar mosaic of a Gulf of Maine pockmark field with a corresponding 3-dimensional geological model generated from seismic data. Statistical analysis of pockmark geometry, gas deposit loci, and subsurface evidence for gas-enhanced reflectors suggest that gas migration from deeper lateral sources along permeable subsurface strata may be the mechanism for pockmark formation in areas lacking gas-curtain seismic reflections. The coarse-grained transgressive ravinement unconformity between Pleistocene glacial-marine mud and Holocene mud may act as a conduit for distributing methane to the field's margins. ?? 2005 Elsevier B.V. All rights reserved.

Marine Geology↗
USGS2020

Sediment export and impacts associated with river delta channelization compound estuary vulnerability to sea-level rise, Skagit River Delta, Washington, USA

Improved understanding of the budget and retention of sediment in river deltas is becoming increasingly important to mitigate and plan for impacts expected with sea level rise. In this study, analyses of historical bathymetric change, sediment core stratigraphy, and modeling are used to evaluate the sediment budget and environmental response of the largest river delta in the U.S. Pacific Northwest to western land-use change beginning in ~1850. An estimated 142±28 M m 3 of sediment accumulated offshore of the emergent Skagit River delta in Washington State between 1890 and 2014 and ~68% of which was found in sand deposits. The fraction of sediment retained in sand reservoirs represents 83% of the expected fluvial sand delivery over this time suggesting their potential utility to evaluate the relative contribution of different land uses to sediment runoff through time. A significantly higher ratio of sand retention to delivery during the period 1890–1939 coincided with extensive watershed denudation (clear-cut logging) and channel dredging, relative to the period 1940–2014, which was characterized by improved forest practices and sediment management to protect endangered species but also more extensive river channelization. Retention in the delta foreset of 78% of the sand delivered by the river between 1890 and 1939 was associated with extensive sediment bypassing and delta progradation that is shown to be 5–10x higher than rates over the Holocene. Comparable offshore sand retention over time and higher nearshore retention subsequent to 1940 after normalizing for the assumed reduction in sediment runoff with improved forest practices, suggests that channelization has continued to influence sediment export at a magnitude equivalent to the effects of early logging. Adverse impacts of the bypassing sediment regime to natural hazards risk and ecosystem management concerns are discussed, including the role of the lost sediment as a resource to mitigate subsiding coastal lands vulnerable to flood impacts. The sediment budget and coastal change analyses provide a framework for evaluating opportunities to achieve greater resilience across several sectors of coastal land use important in low-lying deltas worldwide.

Washington↗
USGS2014

Selenium and mercury concentrations in harbor seals (Phoca vitulina) from central California: Health implications in an urbanized estuary

We measured total selenium and total mercury concentrations ([TSe] and [THg]) in hair (n = 138) and blood (n = 73) of harbor seals ( Phoca vitulina ) from California to assess variation by geography and sex, and inferred feeding relationships based on carbon, nitrogen, and sulfur stable isotopes. Harbor seals from Hg-contaminated sites had significantly greater [THg], and lesser [TSe] and TSe:THg molar ratios than seals from a relatively uncontaminated site. Males had significantly greater [THg] than females at all locations. Sulfur stable isotope values explained approximately 25% of the variability in [THg], indicating increased Hg exposure for seals with a greater use of estuarine prey species. Decreased [TSe] in harbor seals from Hg-contaminated regions may indicate a relative Se deficiency to mitigate the toxic effects of Hg. Further investigation into the Se status and the potential negative impact of Hg on harbor seals from Hg-contaminated sites is warranted.

California↗
USGS2016

Regional assessment of persistent organic pollutants in resident mussels from New Jersey and New York estuaries following Hurricane Sandy

Resident mussels are effective indicators of ecosystem health and have been utilized in national assessment and monitoring studies for over two decades. Mussels were chosen because contaminant concentrations in their tissues respond to changes in ambient environmental levels, accumulation occurs with little metabolic transformation and a substantial amount of historic data were available. Mussels were collected from 10 previously studied locations approximately a year after Hurricane Sandy. Regionally, concentrations of polychlorinated biphenyls (PCBs) and polycyclic aromatic hydrocarbons (PAHs) decreased significantly, while concentrations of organochlorine pesticides (OCPs) remained unchanged, and polybrominated diphenyl ethers (PBDEs) increased compared to historic concentrations. Although concentrations of PCBs, OCPs and PAHs were at or near record low concentrations, long-term trends did not change after Hurricane Sandy. To effectively measure storm-induced impacts it is necessary to understand the factors influencing changes in mussel body burdens and have a long-term monitoring network and an ability to mobilize post event.

New Jersey, New York↗
USGS2021

Partitioning and transformation of organic and inorganic phosphorus among dissolved, colloidal and particulate phases in a hypereutrophic freshwater estuary

Phosphorus (P) loadings to the Great Lakes have been regulated for decades, but re-eutrophication and seasonal hypoxia have recently been increasingly reported. It is of paramount importance to better understand the fate, transformation, and biogeochemical cycling processes of different P species across the river-lake interface. We report here results on chemical speciation of P in the seasonally hypoxic Fox River-Green Bay system and variations in sources and partitioning of P species along the aquatic continuum. During midsummer when productivity is generally high, phosphate and dissolved organic P (DOP) were the major species in river water while particulate-organic-P predominated in open bay waters, showing a dynamic change in the chemical speciation of P along the river-bay transect with active transformations between inorganic and organic P and between colloidal and particulate phases. Colloidal organic P (COP, >1 kDa) comprised 33‒65% of the bulk DOP, while colloidal inorganic P was generally insignificant and undetectable especially in open bay water. Sources of COP changed from mainly allochthonous in the Fox River, having mostly smaller sized colloids (1–3 kDa) and a lower organic carbon to phosphorus (C/P) ratio, to predominantly autochthonous in open bay waters with larger sized colloids (>10 kDa) and a higher organic C/P ratio. The observed high apparent distribution coefficients ( K d ) of P between dissolved and particulate phases and high-abundant autochthonous colloidal and particulate organic P in the hypereutrophic environment suggest that, in addition to phosphate, colloidal/particulate organic P may play a critical role in the biogeochemical cycling of P and the development of seasonal hypoxia.

Wisconsin↗
USGS2017

Diatoms in estuaries and tidal marshes

Diatoms from estuarine and marsh sediments can be used to evaluate a number of geological processes. Information on salinity, elevation, and substrate derived from modern assemblages have been used to determine local and regional Holocene sea level history, identify seismic and tsunami events, and aid in the recognition of regional variations in precipitation. In order to apply diatoms to these questions, it is necessary to have a detailed knowledge of the ecology of marine, brackish, and freshwater taxa, as well as an understanding of the taphonomic processes that determine the final diatom assemblage. The potential for studies of pre-Holocene estuarine depositional systems is largely limited by the availability of study sites.

The Paleontological Society Papers↗
USGS2010

Response of a macrotidal estuary to changes in anthropogenic mercury loading between 1850 and 2000

Methylmercury (MeHg) bioaccumulation in marine food webs poses risks to fish-consuming populations and wildlife. Here we develop and test an estuarine mercury cycling model for a coastal embayment of the Bay of Fundy, Canada. Mass budget calculations reveal that MeHg fluxes into sediments from settling solids exceed losses from sediment-to-water diffusion and resuspension. Although measured methylation rates in benthic sediments are high, rapid demethylation results in negligible net in situ production of MeHg. These results suggest that inflowing fluvial and tidal waters, rather than coastal sediments, are the dominant MeHg sources for pelagic marine food webs in this region. Model simulations show water column MeHg concentrations peaked in the 1960s and declined by almost 40% by the year 2000. Water column MeHg concentrations respond rapidly to changes in mercury inputs, reaching 95% of steady state in approximately 2 months. Thus, MeHg concentrations in pelagic organisms can be expected to respond rapidly to mercury loading reductions achieved through regulatory controls. In contrast MeHg concentrations in sediments have steadily increased since the onset of industrialization despite recent decreases in total mercury loading. Benthic food web MeHg concentrations are likely to continue to increase over the next several decades at present-day mercury emissions levels because the deep active sediment layer in this system contains a large amount of legacy mercury and requires hundreds of years to reach steady state with inputs.

Environmental Science & Technology↗
USGS2001

Avian communities in baylands and artificial salt evaporation ponds of the San Francisco Bay estuary

San Francisco Bay wetlands, seasonal and tidal marshes between the historic low and high tide lines, are now highly fragmented because of development during the past 150 years. Artificial salt pond systems in the Bay are hypersaline and typically support simple assemblages of algae and invertebrates. In order to establish the value of salt ponds for migratory waterbirds, we used datasets to conduct a meta-analysis of avian communities in the baylands and salt ponds of San Pablo Bay. Fifty-three species of waterbirds in the salt ponds represented six foraging guilds: surface feeders, shallow probers, deep probers, dabblers, diving benthivores and piscivores. The total number of species and the Shannon-Weiner diversity index was higher in baylands than in salt ponds during all four seasons. However, overall bird density (number/ha) was higher in salt ponds compared with baylands in the winter and spring, primarily because of large concentrations of benthivores. Cessation of salt production in 1993 and subsequent reduction in water depth resulted in a decline of some diving duck populations that used the salt ponds.

Hydrobiologia↗
USGS2004

Paleomagnetic correlation of late Holocene earthquakes among estuaries in Washington and Oregon

Paleomagnetic directions of estuarine mud provide additional evidence that individual earthquakes, or rapid series of earthquakes, caused widespread coseismic land-level changes during the past 2000 years in western Washington and Oregon. Most of the paleomagnetic measurements were made on mud dating from the first decades after coseismic subsidence from plate-boundary earthquakes at the Cascadia subduction zone. Mud deposited soon after the A.D. 1700 Cascadia earthquake has similar remanent directions among all five sites ( k = 171) sampled along 80 km of Pacific coast between Grays Harbor and the mouth of the Columbia River. Likewise, internally consistent directions were obtained along this stretch of coast from mud deposited soon after a plate-boundary earthquake (or earthquake series) in A.D. 340–410 and soon after another such event in A.D. 680–720. Also analyzed were remanent magnetizations of mud deposited shortly before (or shortly after) land-level changes from seismicity in the North America plate beneath Puget Sound. A mean direction for sites on the Snohomish River delta, near Everett, from the time of an earthquake on the Seattle fault in A.D. 900–930 is statistically identical (95% confidence level) to a mean direction in mud that was uplifted in A.D. 800–1000 at potentially correlative sites near Tacoma and Olympia. The paleomagnetic direction from Everett for the upper-plate earthquake of A.D. 900–930 differs substantially from that for a plate-boundary earthquake in A.D. 810–1190. This difference implies that the upper-plate earthquake preceded the plate-boundary earthquake by a century or two on the basis of comparisons of their paleomagnetic poles with a previously reconstructed path of geomagnetic paleosecular variation in western North America.

Oregon, Washington↗
USGS2009

Investigation of aquifer-estuary interaction using wavelet analysis of fiber-optic temperature data

Fiber-optic distributed temperature sensing (FODTS) provides sub-minute temporal and meter-scale spatial resolution over kilometer-long cables. Compared to conventional thermistor or thermocouple-based technologies, which measure temperature at discrete (and commonly sparse) locations, FODTS offers nearly continuous spatial coverage, thus providing hydrologic information at spatiotemporal scales previously impossible. Large and information-rich FODTS datasets, however, pose challenges for data exploration and analysis. To date, FODTS analyses have focused on time-series variance as the means to discriminate between hydrologic phenomena. Here, we demonstrate the continuous wavelet transform (CWT) and cross-wavelet transform (XWT) to analyze FODTS in the context of related hydrologic time series. We apply the CWT and XWT to data from Waquoit Bay, Massachusetts to identify the location and timing of tidal pumping of submarine groundwater.

Geophysical Research Letters↗
USGS2018

Three-dimensional modeling of fine sediment transport by waves and currents in a shallow estuary

A suspended sediment transport model is implemented in the unstructured‐grid SUNTANS model and applied to study fine‐grained sediment transport in South San Francisco Bay. The model enables calculation of suspension of bottom sediment based on combined forcing of tidal currents and wind waves. We show that accurate results can be obtained by employing two‐size classes which are representative of microflocs and macroflocs in the Bay. A key finding of the paper is that the critical calibration parameter is the ratio of the erosion of the microflocs to macroflocs from the bed. Different values of this erosion ratio are needed on the shallow shoals and deeper channels because of the different nature of the sediment dynamics in these regions. Application of a spatially variable erosion ratio and critical shear stress for erosion is shown to accurately reproduce observed suspended sediment concentration at four‐field sites located along a cross‐channel transect. The results reveal a stark contrast between the behavior of the suspended sediment concentration on the shoals and in the deep channel. Waves are shown to resuspend sediments on the shoals, although tidal and wind‐generated currents are needed to mix the thin wave‐driven suspensions into the water column. The contribution to the suspended sediment concentration in the channel by transport from the shoals is similar in magnitude to that due to local resuspension. However, the local contribution is in phase with strong bottom currents which resuspend the sediments, while the contribution from the shoals peaks during low‐water slack tide.

San Francisco Bay↗
USGS2021

Cohesive sediment modeling in a shallow estuary: Model and environmental implications of sediment parameter variation

Numerical models of sediment transport in estuarine systems rely on parameter values that are often poorly constrained and can vary on timescales relevant to model processes. The selection of parameter values can affect the accuracy of model predictions, while environmental variation of these parameters can impact the temporal and spatial ranges of sediment fluxes, erosion, and deposition in the real world. We implemented a numerical model of San Pablo Bay, an embayment within San Francisco Bay, California, for November–December 2014, and compared model outputs to observations of water level, velocity, wave parameters, salinity, and suspended sediment concentration (SSC) in the shallow regions. Idealized model runs show that wind timing relative to the phase of the tides is the strongest control on sediment fluxes and bed erosion. We varied sediment erodibility in the outflow of the Petaluma River; while this causes erosion and deposition to vary strongly through the shallows system, total export from the shallows does not change. Model runs with realistic winds show that wind likely resuspends faster settling particles or allows for more particle flocculation; particle settling velocity controls system-wide sediment accumulation. At the margins of the system, the magnitude of SSC is closely tied to wind direction when winds occur during flood tide, but sediment deposition is less connected: Both bed evolution and SSC need to be considered in the prediction of marsh fate. Spatial patterns of light attenuation due to SSC is strongly tied to assumed settling velocity.

California↗
USGS2007

Management of fluid mud in estuaries, bays, and lakes. II: Measurement, modeling, and management

Techniques for measurement, modeling, and management of fluid mud are available, but research is needed to improve them. Fluid mud can be difficult to detect, measure, or sample, which has led to new instruments and new ways of using existing instruments. Multifrequency acoustic fathometers sense neither density nor viscosity and are, therefore, unreliable in measuring fluid mud. Nuclear density probes, towed sleds, seismic, and drop probes equipped with density meters offer the potential for accurate measurements. Numerical modeling of fluid mud requires solving governing equations for flow velocity, density, pressure, salinity, water surface, plus sediment submodels. A number of such models exist in one-, two-, and three-dimensional form, but they rely on empirical relationships that require substantial site-specific validation to observations. Management of fluid mud techniques can be classified as those that accomplish: Source control, formation control, and removal. Nautical depth, a fourth category, defines the channel bottom as a specific fluid mud density or alternative parameter as safe for navigation. Source control includes watershed management measures to keep fine sediment out of waterways and in-water measures such as structures and traps. Formation control methods include streamlined channels and structures plus other measures to reduce flocculation and structures that train currents. Removal methods include the traditional dredging and transport of dredged material plus agitation that contributes to formation control and/or nautical depth. Conditioning of fluid mud by dredging and aerating offers the possibility of improved navigability. Two examples—the Atchafalaya Bar Channel and Savannah Harbor—illustrate the use of measurements and management of fluid mud.

Journal of Hydraulic Engineering↗
USGS2012

Use of acoustic technology to define hydraulic characteristics of an estuary near the Mississippi Gulf Coast

An Acoustic Doppler Current Profiler (ADCP) was used on the Jourdan River at Interstate Highway 10 near Kiln, Mississippi, in 1996 to measure three-dimensional velocity vectors and water depths and in 1998, in combination with a global positioning system, to define channel bathymetry in the vicinity of the bridge. During a 25-hour period on September 19-20, 1996, 117 consecutive measurements of stage and discharge were obtained throughout a complete tidal cycle. These measurements were obtained during the time of year when headwater flows were minimal, and, therefore, the tidal-affected flow conditions were noticeable. The stage ranged from only 0.7 to 2.8 ft above sea level, but discharge ranged from 3,980 ft 3 /s flowing upstream to 5,580 ft 3 /s flowing downstream. The average discharge during the 25-hour period was only 80 ft 3 /s flowing downstream. By using the ADCP, full downstream flow, bi-directional flow, and full upstream flow conditions were identified. If conventional measurement techniques had been used, the bi-directional flow conditions could not have been detected since flow direction would have been based on what was seen at the water surface. These measurements were used to define the lower range of the stage-storage-volume relation inland of the highway. On June 10, 1998, the ADCP, in combination with a global positional system, was used to define channel bathymetry for the river reach from about 3,500 ft upstream to about 2,500 ft downstream of the bridge. The bathymetry was compared to past soundings obtained in the vicinity of the bridge; as much as 18 ft of total scour was indicated to have occurred at a bridge pier. Copyright ASCE 2004.

Conference Paper↗
USGS2012

USGS advances in integrated, high-resolution sea-floor mapping: inner continental shelf to estuaries

The U.S. Geological Survey (USGS) has been involved in geological mapping of the sea floor for the past thirty years. Early geophysical and acoustic mapping efforts using GLORIA (Geologic LOng Range Inclined ASDIC) a long-range sidescan-sonar system, provided broad-scale imagery of deep waters within the U.S. Exclusive Economic Zone (EEZ). In the early 1990's, research emphasis shifted from deep- to shallow-water environments to address pertinent coastal research and resource management issues. Use of shallow-water, high-resolution geophysical systems has enhanced our understanding of the processes shaping shallow marine environments. However, research within these shallow-water environments continues to present technological challenges.

Conference Paper↗
USGS2025

Seasonal movements of nonnative White Catfish in the Penobscot River estuary

Objective White Catfish Ameiurus catus has been introduced to coastal watersheds across the United States. In the Penobscot River, Maine, this species has become increasingly common in upstream habitats that have been made accessible by recent dam removals. We characterized the movements of White Catfish to understand the temporal variation in their movement patterns and contextualize these findings within the recent changes in watershed connectivity. Methods We captured and tagged 10 adult White Catfish (mean fork length = 271 mm) with acoustic transmitters in the lower Penobscot River in July 2022. The movements of the tagged fish were monitored through April 2023 with a large network of stationary receivers. Results The tagged catfish were detected up to 6 km upstream and 31 km downstream from the release site. The total distance that was traveled by individuals ranged from 0 to 154 km during the study. Fall and spring movements were associated with changes in river flow and water temperature, but fish were relatively stationary from December through March, when at least five individuals were assumed to have overwintered in lower river tributaries. Conclusion Our results show that individual White Catfish may move considerable distances within large river systems and that these movements are potentially facilitated by changing river conditions. Collectively, this study fills a long-standing knowledge gap about the movement ecology of this species, adds context to help explain a recent increase in observations within their introduced range, and shows how changes in river conditions may be used to predict when and where these fish will move within a tidal system.

Maine↗
USGS2022

A size-based stock assessment model for invasive blue catfish in a Chesapeake Bay sub-estuary during 2001–2016

Stock assessment modeling provides a means to estimate the population dynamics of invasive fishes and may do so despite data limitations. Blue catfish ( Ictalurus furcatus ) were introduced to the Chesapeake Bay watershed to support recreational fisheries but also consume species of conservation need and economic importance. To assess management tradeoffs, managers need to understand the current status of the population and anticipate future population abundance and trends. A Bayesian size-based stock assessment model was used to estimate blue catfish abundance, fishing mortality, and size structure over time (2001–2016) in the tidal James River. The model estimated population size increases until around 2006, with declines in total abundance after 2011 and large blue catfish (≥80 cm total length) after 2001. These first estimates of blue catfish population dynamics in the Chesapeake Bay region provide inputs for projection models to evaluate prospective management actions and identify monitoring needs.

Virginia↗