Bathymetric survey and physical and chemical-related properties of Smithport Lake, Louisiana, July 1997
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Water-Resources Investigations Report↗
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Bathymetric survey and physical and chemical-related properties of Cypress Bayou Reservoir, Louisiana, October 1997 and August and September 1998
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Water-Resources Investigations Report↗
Bathymetric survey and physical and chemical-related properties of Black Bayou Reservoir, Louisiana, September and October 1997
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Water-Resources Investigations Report↗
Chemical contamination and physical characteristics of sediments in the upper Great Lakes connecting channels 1985
Contamination of sediments by toxic organic substances and heavy metals was widespread throughout the connecting channels of the upper Great Lakes in 1985. Sediments at 250 stations in the connecting channels were analyzed for total PCBs, oil and grease, phenols, total cyanide, total volatile solids, mercury, cadmium, chromium, cobalt, copper, lead, nickel, and zinc, and the results were evaluated according to U.S. EPA guidelines for polluted sediments. Sediments were most heavily contaminated near industrialized areas, although some areas more than 40 km downstream from known point sources of pollution were moderately contaminated by oil and metals.
Report↗
Agricultural herbicide transport in a first-order intermittent stream, Nebraska, USA
The behavior of herbicides in surface waters is a function of many variables, including scale of the watershed, physical and chemical properties of the herbicide, physical and chemical properties of the soil, rainfall intensity, and time of year. In this study, the transport of 6 herbicides and 12 herbicide degradates was examined during the 2004 growing season in an intermediate-scale agricultural watershed (146 ha) that is drained by a first-order intermittent stream, and the mass load for each herbicide in the stream was estimated. The herbicide load during the first week of storm events after application ranged from 17% of annual load for trifluralin to 84% of annual load for acetochlor. The maximum weekly herbicide load in the stream was generally within the first 3 weeks after application for those compounds that were applied within the watershed during 2004, and later for herbicides not applied within the watershed during 2004 but still detected in the stream. The apparent dominant mode of herbicide transport in the stream-determined by analysis amongst herbicide and conservative ion concentrations at different points in the hydrograph and in base flow samples-was either overland runoff or shallow subsurface flow, depending on the elapsed time after application and type of herbicide. The load as a percentage of use (LAPU) for the parent compounds in this study was similar to literature values for those compounds applied by the farmer within the watershed, but smaller for those herbicides that had rainfall as their only source within the watershed.
Nebraska↗
Ecological status of aquatic communities in selected streams in the Milwaukee Metropolitan Sewerage District planning area of Wisconsin, 2004–13
A total of 14 wadable streams in urban or urbanizing watersheds near Milwaukee, Wisconsin, were sampled in 2004, 2007, 2010, and 2013 to assess the ecological status of aquatic communities (biota), including benthic algae and invertebrates, and fish. To assess temporal variation, additional community sampling was also done at a subset of three sites in 2011 and 2012. Relative abundances of each type of organism were used to calculate biological metrics, such as richness and diversity, percentages of intolerant and tolerant organisms, and indexes of biotic integrity for invertebrates and fish. Selected environmental (physical and chemical) data in the streams were collected to evaluate potential relations to the biota and the ecological health of the stream. Physical and chemical data included land use/land cover, stream discharge from U.S. Geological Survey (USGS) streamgages (except at 2 creeks that were not gaged), stream habitat, microhabitat at invertebrate collection locations, water quality (except at 2 creeks that were not gaged), field measurements of several water-quality constituents, measures of benthic algal biomass, and toxicity and chemical tests on extracts from passive samplers deployed at a subset of 6 sites. Relative abundances of organisms and biological metrics were compared among sampling years and with environmental metrics to evaluate the ecological status of these streams and determine primary stressors on the aquatic communities, with the aim of helping resource managers understand and work toward improving the ecological health of these and other urban and urbanizing rivers in the study area. Biological metrics for most sites indicated some level of diminished ecological status when compared across all sampled sites and when compared with rating scales for selected metrics. The least degraded sites among all those sampled—indicated by aggregate bioassessments for algae, invertebrates, and fish metrics and in order starting with the best overall condition—were the Milwaukee River near Cedarburg, Menomonee River at Menomonee Falls, Jewel Creek, and Milwaukee River at Milwaukee. The most degraded sites were Menomonee River at Wauwatosa, Root River at Greenfield, Lincoln Creek, and the Kinnickinnic River. Differences in aggregate bioassessments indicate that aquatic communities at the Menomonee River at Wauwatosa site and the Root River at Greenfield site were worse in 2013 than in 2004; however, Oak Creek and Honey Creek sites were better. In 2013, several sites had less than 30-percent pollution-sensitive diatoms indicating degraded algal assemblages. Invertebrate metrics for most of the 14 sites in 2013 were lower than in 2004 and indicate that invertebrate assemblages at most sampled sites were more degraded in 2013. Tolerant fish taxa made up more than 40 percent of assemblages at most sites and nearly 100 percent of assemblages at four sites. At times, in some smaller streams, too few fish were captured to compute an Index of Biotic Integrity with confidence, and invertebrates provided a better means for assessing the ecological status and water quality. With these few exceptions, the use of all three groups of biota provided the most robust assessments at the 14 sites in 2004–13. Physical and chemical stressors were correlated to adverse effects on aquatic biota at the sampled streams. Passive samplers were deployed at a subset of six sites in 2013. Microtox results indicated there was little or no toxicity at the Milwaukee River near Cedarburg site and at the Oak Creek site, slight toxicity at the Lincoln Creek and Honey Creek sites, and moderate toxicity at the Milwaukee River at Milwaukee site and the Little Menomonee River site; however, based on cytochrome-P450 reporter gene system toxicity tests, potential toxicity from hydrophobic organic contaminants was measured at all six sites. For all 14 sites, physical and chemical stressors related to urbanization correlated with biological metrics for algae, invertebrates, and fish. Most stressors for aquatic biota reflected an urban signature. Stressors related to ecological condition in our study were chemical and physical, such as developed land, impervious surface in the watershed, urban land in a buffer area around the stream (a 100-foot [30-meter]-wide area on each side of the stream, and maximum instantaneous discharge normalized by drainage area (a measure of flood and scour effects). Chemical stressors included low waterborne concentrations of dissolved oxygen and high concentrations of chloride, zinc and other metals, nutrients (nitrite and phosphorus), and fecal coliform bacteria. Although algae, invertebrates, and fish did not always demonstrate a significant response to the same stressors, higher abundances of high total phosphorus-indicator diatoms, lower ratings for invertebrate biotic integrity indexes and percentages of mayflies-stoneflies-caddisflies, and lower values for fish biotic integrity indexes underscored possible adverse effects of even low levels of developed land. Developed land is typically associated with more rapid runoff, which washes chemicals from impervious surfaces into area waterways and degrades stream habitat for aquatic communities. However, with respect to at least chloride from road salt, diatoms tolerant to dissolved salts were significantly lower with as little as 1-percent mixed forest in the watershed. Lower percentages of urban land in the stream buffer correlated with healthier aquatic assemblages of algae, invertebrates, and fish. The assessment of algal, invertebrate, and fish assemblages coupled with physical and chemical data were highly useful in evaluating the ecological status of aquatic communities at the 14 sites and for determining environmental stressors that may be contributing to reduced stream condition. Some of the stressors could potentially be removed or lessened with stream rehabilitation or changes in watershed management.
Wisconsin↗
Hydrogeology and simulation of flow between the alluvial and bedrock aquifers in the upper Black Squirrel Creek basin, El Paso County, Colorado
Anticipated increases in pumping from the bedrock aquifers in El Paso County potentially could affect the direction and rate of flow between the alluvial and bedrock aquifers and lower water levels in the overlying alluvial aquifer. The alluvial aquifer underlies about 90 square miles in the upper Black Squirrel Creek Basin of eastern El Paso County. The alluvial aquifer consists of unconsolidated alluvial deposits that unconformably overlie siltstones, sandstones, and conglomerate (bedrock aquifers) and claystone, shale, and coal (bedrock confining units) of the Denver Basin. The bedrock aquifers (Dawson, Denver, Arapahoe, and Laramie-Fox Hills aquifers) are separated by confining units (upper and lower Denver and the Laramie confining units) and overlie a relatively thick and impermeable Pierre confining unit. The Pierre confining unit is assumed to be a no-flow boundary at the base of the alluvial/ bedrock aquifer system. During 1949-90, substantial water-level declines, as large as 50 feet, in the alluvial aquifer resulted from withdrawals from the alluvial aquifer for irrigation and municipal supplies. Average recharge to the alluvial aquifer from infiltration of precipitation and surface water was an estimated 11.97 cubic feet per second and from the underlying bedrock aquifers was an estimated 0.87 cubic foot per second. Water-level data from eight bedrock observation wells and eight nearby alluvial wells indicate that, locally, the alluvial and bedrock aquifers probably are hydraulically connected and that the alluvial aquifer in the upper Black Squirrel Creek Basin receives recharge from the Denver and Arapahoe aquifers but-locally recharges the Laramie-Fox Hills aquifer. Subsurface-temperature profiles were evaluated as a means of estimating specific discharge across the bedrock surface (the base of the alluvial aquifer). However, assumptions of the analytical method were not met by field conditions and, thus, analyses of subsurface-temperature profiles did not reliably estimate specific discharge across the bedrock surface. The vertical hydraulic diffusivity of a siltstone and sandstone in the lower Denver confining unit was estimated, by an aquifer test, to be about 8 x 10'4 square foot per day. Physical and chemical characteristics of water from the bedrock aquifers in the study area generally differ from the physical and chemical characteristics of water from the alluvial aquifer, except for the physical and chemical characteristics of water from one bedrock well, which is completed in the Laramie-Fox Hills aquifer. In the southern part of the study area, physical and chemical characteristics of ground water indicate downward flow of water from the alluvial aquifer to the Laramie-Fox Hills aquifer. A three-dimensional numerical model was used to evaluate flow of water between the alluvial aquifer and underlying bedrock. Simulation of steady-state conditions indicates that flow from the bedrock aquifers to the alluvial aquifer was about 7 percent of recharge to the alluvial aquifer, about 0.87 cubic foot per second. The potential effects of withdrawal from the alluvial and bedrock aquifers at estimated (October 1989 to September 1990) rates and from the bedrock aquifers at two larger hypothetical rates were simulated for a 50-year projection period. The model simulations indicate that water levels in the alluvial aquifer will decline an average of 8.6 feet after 50 years of pumping at estimated October 1989 to September 1990 rates. Increases in withdrawals from the bedrock aquifers in El Paso County were simulated to: (1) Capture flow that currently discharges from the bedrock aquifers to springs and streams in upland areas and to the alluvial aquifer, (2) induce flow downward from the alluvial aquifer, and (3) accelerate the rate of waterlevel decline in the alluvial aquifer.
Colorado↗
Occurrence of nitrate and pesticides in ground water beneath three agricultural land-use settings in the eastern San Joaquin Valley, California, 1993-1995
The processes that affect nitrate and pesticide occurrence may be better understood by relating ground-water quality to natural and human factors in the context of distinct, regionally extensive, land- use settings. This study assesses nitrate and pesticide occurrence in ground water beneath three agricultural land-use settings in the eastern San Joaquin Valley, California. Water samples were collected from 60 domestic wells in vineyard, almond, and a crop grouping of corn, alfalfa, and vegetable land-use settings. Each well was sampled once during 1993?1995. This study is one element of the U.S. Geological Survey?s National Water-Quality Assessment Program, which is designed to assess the status of, and trends in, the quality of the nation?s ground- and surface-water resources and to link the status and trends with an understanding of the natural and human factors that affect the quality of water. The concentrations and occurrence of nitrate and pesticides in ground-water samples from domestic wells in the eastern alluvial fan physiographic region were related to differences in chemical applica- tions and to the physical and biogeochemical processes that charac- terize each of the three land-use settings. Ground water beneath the vineyard and almond land-use settings on the coarse-grained, upper and middle parts of the alluvial fans is more vulnerable to nonpoint- source agricultural contamination than is the ground water beneath the corn, alfalfa, and vegetable land-use setting on the lower part of the fans, near the basin physiographic region. Nitrate concentrations ranged from less than 0.05 to 55 milligrams per liter, as nitrogen. Nitrate concentrations were significantly higher in the almond land-use setting than in the vineyard land-use setting, whereas concentrations in the corn, alfalfa, and vegetable land-use setting were intermediate. Nitrate concentrations exceeded the maximum contaminant level in eight samples from the almond land- use setting (40 percent), in seven samples from the corn, alfalfa, and vegetable land-use setting (35 percent), and in three samples from the vineyard land-use setting (15 percent). The physical and chemical characteristics of the vineyard and the almond land-use settings are similar, characterized by coarse-grained sediments and high dissolved- oxygen concentrations, reflecting processes that promote rapid infiltration of water and solutes. The high nitrate concentrations in the almond land-use setting reflect the high amount of nitrogen appli- cations in this setting, whereas the low nitrate concentrations in the vineyard land-use setting reflect relatively low nitrogen applications. In the corn, alfalfa, and vegetable land-use setting, the relatively fine-grained sediments, and low dissolved-oxygen concentrations, reflect processes that result in slow infiltration rates and longer ground-water residence times. The intermediate nitrate concentrations in the corn, alfalfa, and vegetable land-use setting are a result of these physical and chemical characteristics, combined with generally high (but variable) nitrogen applications. Twenty-three different pesticides were detected in 41 of 60 ground- water samples (68 percent). Eighty percent of the ground-water samples from the vineyard land-use setting had at least one pesticide detection, followed by 70 percent in the almond land-use setting, and 55 percent in the corn, alfalfa, and vegetable land-use setting. All concentra- tions were less than state or federal maximum contaminant levels only 5 of the detected pesticides have established maximum contaminant levels) with the exception of 1,2-dibromo-3-chloropropane, which exceeded the maximum contaminant level of 0.2 micrograms per liter in 10 ground-water samples from vineyard land-use wells and in 5 ground- water samples from almond land-use wells. Simazine was detected most often, occurring in 50 percent of the ground-water samples from the vineyard land-use wells and in 30 percent
Water-Resources Investigations Report↗
Associations between benthic flora and diel changes in dissolved arsenic, phosphorus, and related physico-chemical parameters
Diel relationships between physical and chemical parameters and biomass were examined along a 57-km reach of Whitewood Creek, South Dakota, between 29 August and 2 September 1988. A time lag of ∼3-6 h for fluctuations in soluble reactive phosphorus (SRP) concentrations (ranging from 0.1 to 0.5 μM at the downstream sites) relative to dissolved arsenic (ranging from 0.3 to 1.2 μM as arsenate (pentavalent arsenic)) was consistent with our laboratory studies (reported elsewhere) showing preferential cell sorption of orthophosphate over arsenate by creek periphyton. The potential biological effects on SRP diel fluctuations contrasts with abiotic sorption controls for dissolved arsenate (a chemically similar anion). Cycles for pH, like water temperature cycles, lagged irradiance cycles by 1-3 h. Like pH, the amplitude of dissolved arsenic diel cycles was greatest at the site with most abundant biomass. Diel fluctuations in specific conductance (an indicator of groundwater inputs at elevated conductivity relative to the water column) were out of phase with both SRP and dissolved arsenic concentrations suggesting that groundwater was not the direct source of these solutes.
Freshwater Science↗
Transport, behavior, and fate of volatile organic compounds in streams
Volatile organic compounds (VOCs) are compounds with chemical and physical properties that allow the compounds to move freely between the water and air phases of the environment. VOCs are widespread in the environment because of this mobility. Many VOCs have properties that make them suspected or known hazards to the health of humans and aquatic organisms. Consequently, understanding the processes affecting the concentration and distribution of VOCs in the environment is necessary. The transport, behavior, and fate of VOCs in streams are determined by combinations of chemical, physical, and biological processes. These processes are volatilization, absorption, wet and dry deposition, microbial degradation, sorption, hydrolysis, aquatic photolysis, oxidation, chemical reaction, biocon-centration, advection, and dispersion. The relative importance of each of these processes depends on the characteristics of the VOC and the stream. The U.S. Geological Survey National Water-Quality Assessment Program selected 55 VOCs for study. This article reviews the characteristics of the various processes that could affect the transport, behavior, and fate of these VOCs in streams.
Critical Reviews in Environmental Science and Tech↗
Editorial: From cold seeps to hydrothermal vents: Geology, chemistry, microbiology, and ecology in marine and coastal environments
This Research Topic compiles contemporary studies on cold seeps, hydrothermal vents, mud volcanoes, and related seafloor features that are associated with focused fluid emissions and the transfer of carbon, other chemical species, and sometimes heat from the geosphere to the ocean. Because these features sometimes tap fluids and gas originating kilometers below the seafloor, they provide an important window into deep processes that are otherwise inaccessible to scientists. At the shallow portion of their journey, migrating fluids nearing the seafloor contribute to a range of unique biological, physical, and chemical processes within the sediments themselves and at the sediment-water interface. Seafloor fluid emissions play a critical role in global biogeochemical cycles, ocean chemistry, and possibly even climate change. Seafloor leakage points often emit hydrocarbon gases (especially methane and CO 2 ) and are sometimes the loci for deposition of seafloor minerals that have economic value. A burgeoning area of research focuses on natural products generated at these features, seeking compounds with potential pharmaceutical or other applications. Multidisciplinary studies have become routine for characterization of seafloor fluid emission sites, attesting to the inseparability of geologic, physical, chemical, and biological processes in these settings. It is increasingly common for researchers to combine in a single research cruise: subbottom imaging and seafloor mapping; porewater and water column geochemistry and gas sampling; sediment retrieval for lithologic, biostratigraphic, and solid phase analyses; and studies of benthic and subseafloor communities at the microbial to macrofaunal scales. This multidisciplinary approach has the advantage of ensuring the spatial and temporal coincidence of surveys and samples, an important factor at highly dynamic seafloor fluid emission sites. In addition, researchers often use remotely operated vehicles (ROVs), autonomous underwater vehicles (AUVs), or human-occupied vehicles (HOVs) to record video of the seafloor, compile photomosaics, collect targeted samples, and survey with high-resolution geophysical near-seafloor systems, providing a degree of detail about seafloor fluid emission sites that is unprecedented compared to most areas of the deep ocean. While rarer, long-term cabled observatories or shorter-term deployments of portable observatories are also used at some loci for seafloor fluid flux and are particularly helpful for capturing temporal variations at these dynamic features. Here we summarize the Research Topic’s contribution to multidisciplinary seafloor emission studies in the categories of cold seeps, mud volcanoes, and hydrothermal vents. Figure 1 shows the geographic distribution of the studies in this Research Topic and key features referred to in this Introduction.
Frontiers in Earth Science↗
Water-quality and aquatic-community characteristics of selected reaches of the St. Croix River, Minnesota and Wisconsin, 2000
Synoptic sampling was used to determine chemical and biological characteristics of the St. Croix River within a study reach that extended from near Danbury, Wisconsin to the confluence with the Mississippi River at Prescott, Wisconsin. The study was conducted August 7- September 25, 2000 during summer low flow. Dissolved-residue concentrations were found to increase gradually as the river flows downstream, with an abrupt increase downstream of the confluence with the Sunrise River that was primarily attributed to an increase in calcium and magnesium. Dissolved residue concentrations were further augmented by increased yields of chloride and sulfate in the part of the St. Croix Basin between Nevers Dam near St. Croix Falls, Wisconsin and Marine on St. Croix, Minnesota. Nearly all of the nitrogen in transport was in the form of nitrate and organic nitrogen. Organic nitrogen, mainly in particulate form, accounted for most of the gain in total nitrogen load within the study reach. Nitrogen loading to the mainstem indicated relatively uniform nitrogen inputs from the Clam River, Kettle River, and Snake River watersheds. The rate of nitrogen load accrual increased downstream of the confluence with the Sunrise River and in the subreach extending from Nevers Dam through St. Croix Falls to Franconia, Minnesota. Nitrogen load also increased, primarily because of nitrate input, in the part of Lake St. Croix downstream of the confluence with the Kinnickinnic River. Total phosphorus concentrations and loads reflected variations in the amount of particulate phosphorus in transport. Phosphorus loading increased in the part of the St. Croix River that includes Danbury and the confluences of the Yellow River and Clam River. Phosphorus loading also increased downstream of the confluence with the Sunrise River, but the greatest load increase occurred between Nevers Dam and Franconia. Phosphorus load decreased substantially as the river flowed through the pooled reach of Lake St. Croix downstream of Stillwater. Suspended-sediment concentrations were low, ranging from 4.0 to 36 milligrams per liter. The small amount of sediment in transport was reflected in turbidity measurements that ranged from 0.5 to 3.6 Nephelometry Turbidity Units, and transparency tube measurements that were greater than 60 centimeters at all sites. Biological measures of resource quality change in the St. Croix River along its course from Danbury to Prescott. Changes in the biological indicators of resource quality (fish and invertebrate community composition) are most notable just upstream and downstream of the dam at St. Croix Falls, Wisconsin. Aquatic communities in the upper St. Croix River, from near Danbury to near Rush City, Minnesota, indicate minimal physical and chemical disturbance as evidenced by relatively high taxa richness and greater proportions of taxa intolerant to physical and chemical disturbance. In contrast, aquatic communities downstream of the Sunrise River to Marine on St. Croix indicate both physical and chemical disturbance. Resource monitoring, consisting of short-term diagnostic studies, may be needed in parts of the St. Croix River mainstem and tributaries where results from this study indicate constituent loading is greatest and where the aquatic community composition indicates disturbance. Longer-term trend monitoring may be needed to detect physical, chemical and biological responses to natural processes and human activities in the St. Croix River Basin.
Minnesota, Wisconsin↗
Water resources data for Maine, water year 1974
Water resources data for the 1974 water year for Maine including records of streamflow or reservoir storage at gaging stations, partial-record stations, and miscellaneous sites, records of water-quality data on the chemical and physical characteristics of surface- and ground-water, and records of ground-water levels in index wells are given in this report. In Part 1, records are included for 63 gaging stations, of which 62 are streamflow discharge stations, and 1 is a lake station; also are included records for 22 crest-stage partial-record stations, and 14 miscellaneous sites. In Part 2, water quality data on chemical, physical, and biological characteristics of surface and ground water were collected from designated sampling sites at predetermined intervals such as once daily, weekly, monthly, or less frequently, and at some sites data were recorded on punched paper tape at 60minute intervals. Records are given for 38 sampling stations of which 11 are continuous record stations, and 27 are miscellaneous sites. Records of chemical analyses are also given for 21 ground-water sites. In Part 3, water level data are shown for 11 ground-water wells. Locations of surface-water stations, water-quality stations, and ground-water wells are shown in figure 2. A few pertinent stations in bordering States and Provinces are also included in this report. The records were collected and computed by the Water Resources Division of the U.S. Geological Survey under the direction of G. S. Hayes, District Chief, succeeded by C. R. Wagner. These data represent that portion of the National Water Data System collected by the U.S. Geological Survey and cooperating State and Federal agencies in Maine.
Maine↗
Ground water to surface water: Chemistry of thermal outflows in Yellowstone National Park
Geothermal waters in the earth’s subsurface boil with steam separation and may mix with dilute ground waters (that may or may not contain sulfuric acid from sulfur oxidation), resulting in a wide range of compositions when they discharge and emerge at the surface. As they discharge onto the ground surface they undergo evaporative cooling, degassing, oxidation, and mineral precipitation. Within this aquatic environment of rapidly changing physical and chemical parameters, numerous microbial communities develop—some of which affect oxidation and mineral precipitation. Microbes are responsible for rapid oxidation of iron and arsenic in thermal outflows, and for catalyzing the production of sulfuric acid from the oxidation of elemental sulfur. The attractive visual display of colors observed in Yellowstone’s geothermal waters reflects this interplay of physical, chemical, and biological phenomena. Oxidation of dissolved sulfide to thiosulfate occurs abiotically, and thiosulfate can be found in many of Yellowstone’s thermal waters—at any pH, temperature, and composition. Polythionates, on the other hand, are rarely found in Yellowstone waters but are associated with sulfur hydrolysis in Cinder Pool. Oxidation rates of iron and arsenic in overflows have been estimated at 1-3 mM/h and 0.04-0.1 mM/h, respectively—orders of magnitude faster than the abiotic rate. The abiotic production of thiosulfate from oxidation of dissolved sulfi de at Angel Terrace and Ojo Caliente is about 3-30 µM/min, faster by 2-3 orders of magnitude than the laboratory rate at 25°C. The partitioning of dissolved sulfide between that volatilized to the air and that oxidized to thiosulfate has been estimated at Angel Terrace and at Ojo Caliente. For the pH range of 6-8 and the temperature range of 50-93°C, 67-86% of the dissolved sulfide is lost to the atmosphere and 10-33% is oxidized to thiosulfate. Only a very small percentage, if any, forms elemental sulfur under these conditions.
Wyoming↗
A three-dimensional mapping of the ocean based on environmental data
The existence, sources, distribution, circulation, and physicochemical nature of macroscale oceanic water bodies have long been a focus of oceanographic inquiry. Building on that work, this paper describes an objectively derived and globally comprehensive set of 37 distinct volumetric region units, called ecological marine units (EMUs). They are constructed on a regularly spaced ocean point-mesh grid, from sea surface to seafloor, and attributed with data from the 2013 World Ocean Atlas version 2. The point attribute data are the means of the decadal averages from a 57-year climatology of six physical and chemical environment parameters (temperature, salinity, dissolved oxygen, nitrate, phosphate, and silicate). The database includes over 52 million points that depict the global ocean in x, y, and z dimensions. The point data were statistically clustered to define the 37 EMUs, which represent physically and chemically distinct water volumes based on spatial variation in the six marine environmental characteristics used. The aspatial clustering to produce the 37 EMUs did not include point location or depth as a determinant, yet strong geographic and vertical separation was observed. Twenty-two of the 37 EMUs are globally or regionally extensive, and account for 99% of the ocean volume, while the remaining 15 are smaller and shallower, and occur around coastal features. We assessed the vertical distribution of EMUs in the water column and placed them into classical depth zones representing epipelagic (0 m to 200 m), mesopelagic (200 m to 1,000 m), bathypelagic (1,000 m to 4,000 m) and abyssopelagic (>4,000 m) layers. The mapping and characterization of the EMUs represent a new spatial framework for organizing and understanding the physical, chemical, and ultimately biological properties and processes of oceanic water bodies. The EMUs are an initial objective partitioning of the ocean using long-term historical average data, and could be extended in the future by adding new classification variables and by introducing functionality to develop time-specific EMU distribution maps. The EMUs are an open-access resource, and as both a standardized geographic framework and a baseline physicochemical characterization of the oceanic environment, they are intended to be useful for disturbance assessments, ecosystem accounting exercises, conservation priority setting, and marine protected area network design, along with other research and management applications.
Oceanography↗
Effects of sea lamprey substrate modification and carcass nutrients on macroinvertebrate assemblages in a small Atlantic coastal stream
Aquatic macroinvertebrates respond to patch dynamics arising from interactions of physical and chemical disturbances across space and time. Anadromous fish, such as sea lamprey, Petromyzon marinus , migrate from the ocean and alter physical and chemical properties of recipient spawning streams. Sea lamprey disturb stream benthos physically through nest construction and spawning, and enrich food webs through nutrient deposition from decomposing carcasses. Sea lamprey spawning nests support greater macroinvertebrate abundance than adjacent reference areas, but concurrent effects of stream bed modification and nutrient supplementation have not been examined sequentially. We added carcasses and cleared substrate experimentally to mimic the physical disturbance and nutrient enrichment associated with lamprey spawning, and characterized effects on macroinvertebrate assemblage structure. We found that areas receiving cleared substrate and carcass nutrients were colonized largely by Simuliidae compared to upstream and downstream control areas that were colonized largely by Hydropsychidae, Philopotamidae, and Chironomidae. Environmental factors such as stream flow likely shape assemblages by physically constraining macroinvertebrate establishment and feeding. Our results indicate potential changes in macroinvertebrate assemblages from the physical and chemical changes to streams brought by spawning populations of sea lamprey.
Maine↗
Structure, spectroscopy and dynamics of layered H2O and CO2 ices
Molecular dynamics simulations of structural, spectroscopic and dynamical properties of mixed water–carbon dioxide (H 2 O–CO 2 ) ices are discussed over temperature ranges relevant to atmospheric and astrophysical conditions. The simulations employ multipolar force fields to represent electrostatic interactions which are essential for spectroscopic and dynamical investigations. It is found that at the water/CO 2 interface the water surface acts as a template for the CO 2 component. The rotational reorientation times in both bulk phases agree well with experimental observations. A pronounced temperature effect on the CO 2 reorientation time is observed between 100 K and 200 K. At the interface, water reorientation times are nearly twice as long compared to water in the bulk. The spectroscopy of such ices is rich in the far-infrared region of the spectrum and can be related to translational and rotational modes. Furthermore, spectroscopic signatures mediated across the water/CO 2 interface are found in this frequency range (around 440 cm −1 ). These results will be particularly important for new airborne experiments such as planned for SOFIA.
Physical Chemistry Chemical Physics↗
Hydration free energies of cyanide and hydroxide ions from molecular dynamics simulations with accurate force fields
The evaluation of hydration free energies is a sensitive test to assess force fields used in atomistic simulations. We showed recently that the vibrational relaxation times, 1D- and 2D-infrared spectroscopies for CN(-) in water can be quantitatively described from molecular dynamics (MD) simulations with multipolar force fields and slightly enlarged van der Waals radii for the C- and N-atoms. To validate such an approach, the present work investigates the solvation free energy of cyanide in water using MD simulations with accurate multipolar electrostatics. It is found that larger van der Waals radii are indeed necessary to obtain results close to the experimental values when a multipolar force field is used. For CN(-), the van der Waals ranges refined in our previous work yield hydration free energy between -72.0 and -77.2 kcal mol(-1), which is in excellent agreement with the experimental data. In addition to the cyanide ion, we also study the hydroxide ion to show that the method used here is readily applicable to similar systems. Hydration free energies are found to sensitively depend on the intermolecular interactions, while bonded interactions are less important, as expected. We also investigate in the present work the possibility of applying the multipolar force field in scoring trajectories generated using computationally inexpensive methods, which should be useful in broader parametrization studies with reduced computational resources, as scoring is much faster than the generation of the trajectories.
Physical Chemistry Chemical Physics↗