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USGS2016

Distribution and diversity of tunicates utilizing eelgrass as substrate in the western North Atlantic between 39° and 47° north latitude (New Jersey to Newfoundland)

Seagrass meadows are ecologically important habitats that are declining globally at an accelerating rate due to natural and anthropogenic stressors. Their decline is a serious concern as this habitat provides many ecosystem services. Eelgrass ( Zostera marina ) is the dominant seagrass species in the western North Atlantic. It has recently been established that invasive tunicate species possibly threaten the health of eelgrass beds. Colonization of eelgrass leaves by tunicates can inhibit eelgrass growth and may cause shoot mortality. To document the distribution and diversity of tunicate species that attach to eelgrass in the western North Atlantic, we surveyed twenty-one eelgrass sites from New Jersey to Newfoundland. Eight species of tunicates were found to be colonizing eelgrass, of which 6 are considered invasive. Botrylloides violaceus and Botryllus schlosseri were most commonly attached to eelgrass, with B. schlosseri having the largest latitudinal range of any species. Tunicate faunas attached to eelgrass were less diverse north of Gloucester, Massachusetts, where individual survey sites exhibited two species at most and only 4 of the 8 species observed in this study. Percent tunicate cover on eelgrass tended to fall within the 1–25 range, with occasional coverage up to >75–100. Density of eelgrass was highly variable among sites, ranging from <1 to 820 shoots/m². The solitary tunicate Ciona intestinalis was only found on eelgrass at the highest latitude sampled, in Newfoundland, where it is a new invader. The tunicates observed in this study, both solitary and colonial, are viable when attached to eelgrass and pose a potential threat to overgrow and weaken seagrass shoots and reduce the sustainability of seagrass meadows.

Management of Biological Invasions↗

USGS2021

Pollinator communities vary with vegetation structure and time since management within regenerating timber harvests of the Central Appalachian Mountains

Native pollinator populations across the United States are increasingly threatened by a multitude of ecological stressors. Although the drivers behind pollinator population declines are varied, habitat loss/degradation remains one of the most important threats. Forested landscapes, where the impacts of habitat loss/degradation are minimized, are known to support robust pollinator populations in eastern North America. Within heavily forested landscapes, timber management is already implemented as a means for improving forest health and enhancing wildlife habitat, however, little is known regarding the characteristics within regenerating timber harvests that affect forest pollinator populations. In 2018-19, we monitored insect pollinators in 143 regenerating (≤ 9 growing seasons post-harvest) timber harvest sites across Pennsylvania. During 1,129 survey events, we observed over 9,100 bees and butterflies, 220 blooming plant taxa, and collected over 2,200 pollinator specimens. Bee and butterfly abundance were positively associated with season-wide floral abundance and negatively associated with dense vegetation that inhibits the growth of understory floral resources. Particularly in late summer, few pollinators were observed in stands > 6 years post-harvest, with models predicting five times more bees in 1-year-old harvests than in 9-year-old harvests. Pollinator species diversity was positively associated with floral diversity and percent forb cover, and negatively associated with percent tall (>1m) sapling cover. These results suggest that regenerating timber harvests promote abundant and diverse pollinator communities in the Appalachian Mountains, though pollinator abundance declined quickly as woody stems regenerated. Ultimately, our findings contribute to a growing body of literature suggesting that dynamic forest management producing an even mix of age classes would benefit forest pollinator populations in the Central Appalachian Mountains.

Pennsylvania↗

USGS2008

Report of the Federal Advisory Committee on the Bird Banding Laboratory

In the fall of 2005, the Directors of the U.S. Geological Survey (USGS) and the U.S. Fish and Wildlife Service (FWS) determined that to ensure that the Bird Banding Laboratory (BBL) of the USGS maintains and continues its important support of conservation and management of birds, it should be guided by a clear vision for the future. In order to carry out this task, they impaneled a fourteen-member Federal Advisory Committee (FAC) on the Bird Banding Laboratory. It was made up of representatives of the broad bird-banding community, public and private, and was cochaired by a senior representative from each agency. The Committee met four times and a writing subgroup met three times over the course of its work. The Committee identified a new vision and mission for the BBL and identified six goals that it believes should be integral to the development of a strategic plan to achieve them. Those goals are: 1. Facilitate the identification of individual birds through marking. 2. Create automated, electronic systems that efficiently verify, accept, store, and manage data associated with individually marked birds. 3. Facilitate access to and use of data from marked birds for science, conservation, and management. 4. Administer permits in an efficient, timely, and modern manner, and use them to ensure that bird welfare and data quality remain top priorities. 5. Work closely with national and international partners to achieve the mission of the BBL. 6. Manage the BBL in an efficient, cost-effective manner to maximize use of available resources. Most of the report is structured around these goals. The Committee made 2 programmatic recommendations and identified 23 objectives and 58 specific recommendations. The programmatic recommendations are: (1) that the primary role of the BBL is and should continue to be to support the use of banding and banding data by researchers and managers engaged in science, conservation, and management of birds, and not to play a lead role in original research; and (2) that the BBL be managed nationally by USGS headquarters as a research and operational support unit and provided with the resources appropriate to its national and international functions and responsibilities; it should continue to be located physically at the Patuxent Wildlife Research Center (PWRC). In order to achieve its vision and mission, the Committee believes that the BBL must work towards achieving all of the recommendations in this report. Nevertheless, it identified five objectives that stand out as high priority, and they are as follows: *Objective 1.1?to ensure a continuing, adequate supply of high-quality, Federally issued numeric bands of required sizes, materials, and types; *Objective 2.1?to improve mechanisms for verifying, accepting, storing, and managing bird-banding data; *Objective 2.3?to accommodate recapture data; *Objective 4.1?to ensure through the permitting process that banders know how to safely handle birds, collect data accurately, and maintain birds in humane and healthful conditions; and *Objective 5.3?to encourage the development of banding programs in Latin America and the Caribbean. Finally, this Committee believes that the BBL will be well served if it continues to support a Federal Advisory Committee, composed similarly to this one, to continue offering guidance and direction from the broad bird-banding community.

Circular↗

USGS2012

Groundwater-quality data in the Borrego Valley, Central Desert, and Low-Use Basins of the Mojave and Sonoran Deserts study unit, 2008-2010--Results from the California GAMA Program

Groundwater quality in the 12,103-square-mile Borrego Valley, Central Desert, and Low-Use Basins of the Mojave and Sonoran Deserts (CLUB) study unit was investigated by the U.S. Geological Survey (USGS) from December 2008 to March 2010, as part of the California State Water Resources Control Board (SWRCB) Groundwater Ambient Monitoring and Assessment (GAMA) Program's Priority Basin Project (PBP). The GAMA-PBP was developed in response to the California Groundwater Quality Monitoring Act of 2001 and is being conducted in collaboration with the SWRCB and Lawrence Livermore National Laboratory (LLNL). The CLUB study unit was the twenty-eighth study unit to be sampled as part of the GAMA-PBP. The GAMA CLUB study was designed to provide a spatially unbiased assessment of untreated-groundwater quality in the primary aquifer systems, and to facilitate statistically consistent comparisons of untreated-groundwater quality throughout California. The primary aquifer systems (hereinafter referred to as primary aquifers) are defined as parts of aquifers corresponding to the perforation intervals of wells listed in the California Department of Public Health (CDPH) database for the CLUB study unit. The quality of groundwater in shallow or deep water-bearing zones may differ from the quality of groundwater in the primary aquifers; shallow groundwater may be more vulnerable to surficial contamination. In the CLUB study unit, groundwater samples were collected from 52 wells in 3 study areas (Borrego Valley, Central Desert, and Low-Use Basins of the Mojave and Sonoran Deserts) in San Bernardino, Riverside, Kern, San Diego, and Imperial Counties. Forty-nine of the wells were selected by using a spatially distributed, randomized grid-based method to provide statistical representation of the study unit (grid wells), and three wells were selected to aid in evaluation of water-quality issues (understanding wells). The groundwater samples were analyzed for organic constituents (volatile organic compounds [VOCs], pesticides and pesticide degradates, and pharmaceutical compounds), constituents of special interest (perchlorate and N -nitrosodimethylamine [NDMA]), naturally-occurring inorganic constituents (trace elements, nutrients, major and minor ions, silica, total dissolved solids [TDS], alkalinity, and species of inorganic chromium), and radioactive constituents (radon-222, radium isotopes, and gross alpha and gross beta radioactivity). Naturally-occurring isotopes (stable isotopes of hydrogen, oxygen, boron, and strontium in water, stable isotopes of carbon in dissolved inorganic carbon, activities of tritium, and carbon-14 abundance) and dissolved noble gases also were measured to help identify the sources and ages of sampled groundwater. In total, 223 constituents and 12 water-quality indicators were investigated. Three types of quality-control samples (blanks, replicates, and matrix spikes) were collected at up to 10 percent of the wells in the CLUB study unit, and the results for these samples were used to evaluate the quality of the data for the groundwater samples. Field blanks rarely contained detectable concentrations of any constituent, suggesting that contamination from sample collection procedures was not a significant source of bias in the data for the groundwater samples. Replicate samples generally were within the limits of acceptable analytical reproducibility. Median matrix-spike recoveries were within the acceptable range (70 to 130 percent) for approximately 85 percent of the compounds. This study did not attempt to evaluate the quality of water delivered to consumers; after withdrawal from the ground, untreated groundwater typically is treated, disinfected, and (or) blended with other waters to maintain water quality. Regulatory benchmarks apply to water that is delivered to the consumer, not to untreated groundwater. However, to provide some context for the results, concentrations of constituents measured in the untreated groundwater were compared with regulatory and non-regulatory health-based benchmarks established by the U.S. Environmental Protection Agency (USEPA) and CDPH, and to non-regulatory benchmarks established for aesthetic concerns by CDPH. Comparisons between data collected for this study and benchmarks for drinking water are for illustrative purposes only and are not indicative of compliance or non-compliance with those benchmarks. Most inorganic constituents detected in groundwater samples from the 49 grid wells were detected at concentrations less than drinking-water benchmarks. In addition, all detections of organic constituents from the CLUB study-unit grid-well samples were less than health-based benchmarks. In total, VOCs were detected in 17 of the 49 grid wells sampled (approximately 35 percent), pesticides and pesticide degradates were detected in 5 of the 47 grid wells sampled (approximately 11 percent), and perchlorate was detected in 41 of 49 grid wells sampled (approximately 84 percent). Trace elements, major and minor ions, and nutrients were sampled for at 39 grid wells, and radioactive constituents were sampled for at 23 grid wells; most detected concentrations were less than health-based benchmarks. Exceptions in the grid-well samples include seven detections of arsenic greater than the USEPA maximum contaminant level (MCL-US) of 10 micrograms per liter (μg/L); four detections of boron greater than the CDPH notification level (NL-CA) of 1,000 μg/L; six detections of molybdenum greater than the USEPA lifetime health advisory level (HAL-US) of 40 μg/L; two detections of uranium greater than the MCL-US of 30 μg/L; nine detections of fluoride greater than the CDPH maximum contaminant level (MCL-CA) of 2 milligrams per liter (mg/L); one detection of nitrite plus nitrate (NO 2- +NO 3- ), as nitrogen, greater than the MCL-US of 10 mg/L; and four detections of gross alpha radioactivity (72-hour count), and one detection of gross alpha radioactivity (30-day count), greater than the MCL-US of 15 picocuries per liter. Results for constituents with non-regulatory benchmarks set for aesthetic concerns showed that a manganese concentration greater than the CDPH secondary maximum contaminant level (SMCL-CA) of 50 μg/L was detected in one grid well. Chloride concentrations greater than the recommended SMCL-CA benchmark of 250 mg/L were detected in three grid wells, and one of these wells also had a concentration that was greater than the upper SMCL-CA benchmark of 500 mg/L. Sulfate concentrations greater than the recommended SMCL-CA benchmark of 250 mg/L were measured in six grid wells. TDS concentrations greater than the SMCL-CA recommended benchmark of 500 mg/L were measured in 20 grid wells, and concentrations in 2 of these wells also were greater than the SMCL-CA upper benchmark of 1,000 mg/L.

California↗

USGS1994

Biomonitoring our streams

Testing for chemical pollution in our nation's streams has traditionally meant using analytical chemistry. In recent years, environmental agencies have endorsed biological monitoring to enhance or replace chemical monitoring. The theory behind biological monitoring (biomonitoring) is to use the organisms living in the aquatic system as a measure of water quality. This concept was applied to air quality and used by miners who took canaries into deep mines with them. If the canary died, the miners knew the air was bad, and they had to leave the mine. Biomonitoring an aquatic system uses the same theoretical approach . Aquatic organisms are subject to pollutants in the stream as it flows by, day or night. Consequently, the health of the organisms reflects the quality of the water they live in. If the pollution levels reach a critical concentration, certain organisms will die, migrate away, or fail to reproduce, eventually leading to the disappearance of those species at the polluted site. Normally, these organisms will return if conditions improve in the system. The three general components of an aquatic ecosystem that influence the biological community are: water chemistry, geomorphology, and hydrology. Each component influences the health of the biological community individually and together . Toxic chemicals are only a single factor within the water-chemistry component. The relation of these three components to each other can be shown on a triangle (figure 1). The relative importance of one component may change with time and location . At certain times of the year or in different geographical settings, a single factor may exert primary control on the well-being of the biological community. For example, straightening a stream and removing all woody debris drastically alters a stream's geomorphology. This results in loss of natural habitat and shelter for certain organisms. The organisms that require this shelter will disappear from the modified system. Separating the influence of one component from the others is difficult. Consideration of all three components and their interactions is critical when interpreting biomonitormg data.

Open-File Report↗

USGS1999

Relation of pesticide concentrations to season, streamflow, and land use in seven New Jersey streams

The presence and variability of pesticides in seven New Jersey streams was documented by analyzing 146 samples collected from the streams from April 1996 through June 1998. The samples were analyzed for 85 pesticides, including 50 herbicides, 28 insecticides, and 7 degradation products, at method detection limits that ranged from 0.001 to 0.018 μg/L (micrograms per liter). Pesticides were frequently detected; however, concentrations were generally low. The pesticides most frequently detected were atrazine, in 97 percent of the samples; prometon, 96 percent; metolachlor, 95 percent; desethyl-atrazine, 91 percent; simazine, 88 percent; diazinon, 58 percent; alachlor, 56 percent; and carbaryl, 54 percent. Detection frequencies were highest during the growing season (April-September). At least one pesticide was detected in all but one of these samples, and 49 percent of the samples contained 9 or more pesticides. The numbers of pesticides detected at a given site ranged from 13 to 29. Ten pesticides were detected at concentrations that exceeded established water-quality criteria. Thirty-one of these detections were in samples collected during the growing season and one during the nongrowing season. The pesticides that exceeded the U.S. Environmental Protection Agency (USEPA) maximum contaminant level for drinking water were atrazine, which exceeded 3 μg/L in four samples, and alachlor, 2 μg/L in two samples. Cyanazine exceeded the USEPA liftime health advisory level (HAL) of 1 μg/L in two samples. These eight detections occurred during runoff shortly after spring pesticide applications and represent a potential threat to municipal water supplies in the Raritan River basin. Concentrations of chlorpyrifos, chlorthalonil, diazinon, ethyl-parathion, and methyl-azinphos exceeded the chronic life criteria for the protection of aquatic life (ACQR) in 20 samples at four sites during the growing season. Dieldrin was detected in four samples and DDE in two samples at concentrations that exceeded New Jersey Department of Environmental Protection (NJDEP) human health criteria. Individual and total-pesticide concentrations and total numbers of pesticides detected in the samples varied with season and flow conditions. Median and maximum concentrations of most of the pesticides were highest during runoff in the growing season. Pesticide concentrations were typically lower and less variable in the nongrowing season than in the growing season, regardless of changes in hydrologic conditions; however, median concentrations of most pesticides were slightly lower during runoff than during base flow. The median total-pesticide concentration and median total number of pesticides detected were highest and most variable in runoff samples in the growing season. In the nongrowing season, the median total-pesticide concentration was lowest in runoff samples and least variable during base-flow conditions. Median total numbers of pesticides were lowest and least varibale in the nongrowing season during base-flow conditions at most sites. The highest total-pesticide concentrations were detected in samples from the two small agricultural basins (greater than 25 percent of land use is agricultural) during runoff in late spring and early summer. In general, insecticides were detected more frequently and in greater concentrations at urban sites. Concentrations of agricultural herbicides generally decreased with increasing flow at the four sites with less than 10 percent agriculture land use and increased with increasing flow at the three sites with more than 25 percent agricultural land use. Most of the pesticides that correlated positively with streamflow were detected at sites where land use in the basin would indicate the use of those particular pesticides. Most of the pesticides that correlated negatively with streamflow were present at the site in the Coastal Plain or at sites in which the land use in the basin would not indicate heavy u

New Jersey;New York↗

USGS1994

Herbicides and nitrate in near-surface aquifers in the midcontinental United States, 1991

The occurrence and distribution of selected herbicides, atrazine metabolites, and nitrate were determined for near-surface aquifers (within 50 feet of land surface) in the corn- and soybean-producing region of the midcontinental United States. The study region included all or parts of Illinois, Indiana, Iowa, Kansas, Michigan, Minnesota, Missouri, Nebraska, North Dakota, Ohio, South Dakota, and Wisconsin. Water samples were collected during the spring and summer of 1991 from 303 wells completed in near-surface unconsolidated and near-surface bedrock aquifers. At least one herbicide or atrazine metabolite was detected in 24 percent of 579 water samples analyzed for herbicides, based on a reporting limit of 0.05 microgram per liter. However, no herbicide concentration exceeded the U.S. Environmental Protection Agency's maximum contaminant levels or health advisory levels for drinking water. The most frequently detected herbicide compound was desethylatrazine, an atrazine metabolite (18.1 percent), followed by atrazine (17.4 percent); deisopropylatrazine, an atrazine metabolite (5.7 percent); prometon (5.0 percent); metolachlor (2.7 percent); alachlor (1.7 percent); simazine (1.0 percent); metribuzin (1.0 percent); and cyanazine (0.7 percent). The herbicides ametryn, prometryn, propazine, and terbutryn were not detected during this study. Nitrate concentrations equal to or greater than 3.0 milligrams per liter (excess nitrate) were detected in 29 percent of the 599 nitrate analyses, and ammonium concentrations equal to or greater than 0.01 milligram per liter were detected in 78 percent of the 584 ammonium analyses. Nitrate concentrations equal to or greater than the U.S. Environmental Protection Agency's maximum contaminant level for drinking water of 10 milligrams per liter were found in 6 percent of the samples. The frequency of herbicide detection was, in part, affected by the analytical method's reporting limit. Results from this study show that the frequency of atrazine detection increases as the reporting limit decreases. Herbicide metabolite concentrations are critical to understanding the detection of herbicide residues. The frequency of detection of atrazine residue (atrazine + desethylatrazine + deisopropylatrazine) was 22.1 percent, which was more than the frequency of detection of atrazine alone (17.4 percent). Prometon was detected more frequently than every other herbicide except atrazine. The prometon appears to be derived from areas of nonagricultural land use, such as golf courses and residential areas. Herbicides and excess nitrate were both rarely detected in the eastern part of the study region, even though this is an area of intense herbicide and nitrogen-fertilizer use. Hydrogeologic factors, land use, agricultural practices, local features, and water chemistry were analyzed for possible relation to herbicide and excess-nitrate detections. Herbicides and excess nitrate were detected more frequently in near-surface unconsolidated aquifers than in nearsurface bedrock aquifers. The depth to the top of the aquifer was inversely related to the frequency of detection of herbicides and excess nitrate. The proximity of streams to sampled wells also affected the frequency of herbicide detection. Significant seasonal differences were determined for the frequency of herbicide detection, but not for the frequency of excess nitrate.

Illinois, Indiana, Iowa, Kansas, Michigan, Minneso↗

USGS2013

Iron mineralogy and bioaccessibility of dust generated from soils as determined by reflectance spectroscopy and magnetic and chemical properties--Nellis Dunes recreational area, Nevada

Atmospheric mineral dust exerts many important effects on the Earth system, such as atmospheric temperatures, marine productivity, and melting of snow and ice. Mineral dust also can have detrimental effects on human health through respiration of very small particles and the leaching of metals in various organs. These effects can be better understood through characterization of the physical and chemical properties of dust, including certain iron oxide minerals, for their extraordinary radiative properties and possible effects on lung inflammation. Studies of dust from the Nellis Dunes recreation area near Las Vegas, Nevada, focus on characteristics of radiative properties (capacity of dust to absorb solar radiation), iron oxide mineral type and size, chemistry, and bioaccessibility of metals in fluids that simulate human gastric, lung, and phagolysosomal fluids. In samples of dust from the Nellis Dunes recreation area with median grain sizes of 2.4, 3.1, and 4.3 micrometers, the ferric oxide minerals goethite and hematite, at least some of it nanosized, were identified. In one sample, in vitro bioaccessibility experiments revealed high bioaccessibility of arsenic in all three biofluids and higher leachate concentration and bioaccessibility for copper, uranium, and vanadium in the simulated lung fluid than in the phagolysosomal fluid. The combination of methods used here to characterize mineral dust at the Nellis Dunes recreation area can be applied to global dust and broad issues of public health.

Nevada↗

USGS2010

A summary of information on the rust Puccinia psidii Winter (guava rust) with emphasis on means to prevent introduction of additional strains to Hawaii

The neotropical rust fungus Puccinia psidii ( P. psidii ) was originally described from the host common guava in its native Brazil but has been found since on hosts throughout the myrtle family (Myrtaceae), including a dramatic host jump to nonnative Eucalyptus plantations. Most rust fungi are able to live only on a very narrow range of host species. P. psidii is unusual both for having a broad host range and for the intensity of its damage to susceptible young growth. This rust first got a foothold in the United States in Florida more than three decades ago. The U.S. Department of Agriculture (USDA) has since considered it a nonactionable, nonreportable pest. Hawaii and Florida are the only two states with native species in the myrtle family. Over a period of 30 years, this rust has done little damage to any of the scattered native Myrtaceae in Florida, although the host range of the rust has gradually grown to about 30 mostly nonnative species in the family, apparently because of increasing genetic variety of the rust by repeated introductions. However, Florida’s native Myrtaceae are among the roughly 1,100 neotropical species that are largely resistant to P. psidii . The 3,000 species of non-neotropical Myrtaceae of the Pacific, Australia, Asia, and Africa are expected to prove much more vulnerable to P. psidii . Little is known about the genetics or genetic strains of P. psidii , although existing literature shows that there are numerous strains that have differential ability to infect suites of host plants. The rust was first recorded in the state of Hawaii on Oahu in April 2005 and quickly spread throughout the Hawaiian Islands. The main concern in Hawaii became the potential threat to ohia, Metrosideros polymorpha (Myrtaceae), the endemic forest tree species overwhelmingly important in Hawaii’s nature and culture. The potential ecological consequences of a virulent strain of rust on ohia forests are immense, due to its role as a foundation tree species and the diversity of niches it fills in Hawaii. A single genetic strain of the rust is established in Hawaii, apparently composed of a single genotype lacking sexual reproduction. P. psidii has been found statewide in Hawaii attacking Myrtaceae from near sea level to about 1,200 m elevation in areas with rainfall ranging from 750–5,000 mm. Five of eight native Myrtaceae and at least 15 nonnative species have been observed as hosts of P. psidii in Hawaii. The federally endangered Eugenia koolauensis (nioi) and the nonendangered indigenous species Eugenia reinwardtiana are severely damaged. The introduced (an Asian species) and invasive rose apple, Syzygium jambos , is severely affected at a landscape scale, with widespread crown dieback and many instances of complete tree death. In spite of billions of wind-dispersed rust spores produced from rose apple infestations during 2006 to 2008, adjacent ohia have been little affected to date by the rust strain in Hawaii. Within the elevation range of the rust, P. psidii is found on less than 5 percent of the ohia trees in the wild; on those ohia trees on which the rust is found, it is normally found on less than 5 percent of the leaves. The strain in Hawaii has not attacked many of the species known to be infected by the rust elsewhere, including common guava. On the basis of the very substantial genetic diversity of the much-studied, crop-damaging species of the genus Puccinia , there is good reason to believe that there are at minimum dozens and likely hundreds or thousands of genotypes of P. psidii , likely concentrated in the core range in Brazil but with potential for dispersal by globalization. Multiple genotypes are believed already present in the United States and certain to spread freely in the absence of restrictions. The U.S. Forest Service has initiated a major collaborative project in Brazil to investigate the genetics of susceptibility of Hawaii’s ohia to P. psidii , but initial results will likely not be available for several years. If just one more strain reaches Hawaii, the consequences could be dire for ohia, with each new genotype arriving having an unknown likelihood of increasing damage to ohia; possibilities for mutation and (or) genetic mixing, even with asexual strains, are apparently substantial, based on what is known about other Puccinia species. Investigations are needed to clarify rust-nioi relationships. However, it is likely that keeping out new strains of P. psidii may be important for long-term survival of nioi as well as for the health of ohia forest. The source of Hawaii’s initial invasion by P. psidii is uncertain but is strongly suspected to have been decorative foliage of species in the myrtle family from the mainland United States, most likely California, where there had been outbreaks of this rust on cultivated myrtle in 2005. In 2006–7, Maui’s Hawaii Department of Agriculture (HDOA) inspectors intercepted several P. psidii infected shipments of foliage myrtle, shipped from several California counties. Recognizing the huge threat of the rust to Hawaii’s one million acres of ohia forests, and consequently to Hawaii’s watersheds and biodiversity, Hawaii’s Board of Agriculture unanimously approved an interim rule in August 2007 banning importation of plants in the myrtle family from “infested areas,” specified as South America, Florida, and California. However, the interim rule has not been made permanent by HDOA, and the department has stated that it needs further information to formulate a long-term rule that imposes appropriate measures. Rust spores can survive for 2 to 3 months, and the pathogen can be transported to Hawaii on Myrtaceae from anywhere in the world through the United States mainland. There is much geographic reshuffling of flowers and foliage among the far-flung firms in the trade, especially for bouquet making. Because P. psidii is a nonactionable and nonreportable pest in the United States, foliage and flowers of the myrtle family can move freely into the country (usually but not necessarily always through the ports of Miami or Los Angeles), and from state to state. Currently, the State of Hawaii regulates incoming plant material in the family Myrtaceae by visual inspection. Inspection capacity and latent (asymptomatic) infections limit the ability to detect the rust. New molecular tests could improve detection efficiency, but the cost and the time required to process samples currently precludes their routine use in ports of entry. Interdiction, which has effectively kept coffee rust ( Hemileia vastatrix ) out of Hawaii for 120 years, offers the strongest protection for Hawaii’s native ecosystems from P. psidii . Interdiction of Myrtaceae from the continental United States could have the important supplementary benefit of preventing establishment in Hawaii of other very significant pests of multiple species of Myrtaceae that are already in the country, including: the Eugenia psyllid Trioza eugeniae (Hemiptera: Psyllidae); Chrysophtharta m-fuscum , the Eucalyptus tortoise beetle (Coleoptera: Chrysomelidae); Leptocybe invasa , the blue gum chalcid wasp (Hymenoptera: Chalcidae); and the fungal pathogens Mycosphaerella molleriana (Ascomycota: Mycosphaerelliaceae, crinkle leaf disease of Eucalyptus spp.) and Neofusicoccum parvum (Ascomycota: Botryosphaeriaceae), currently causing serious damage to Syzygium paniculatum in south Florida nurseries. Each of these pests would be likely to cause very significant damage to native and (or) cultivated Myrtaceae in Hawaii. Each of these pests is a prime candidate for transport by the foliage and (or) nursery stock pathways from Florida and California into Hawaii. Hawaii Department of Agriculture has a clear mandate to protect Hawaii’s natural environment, forestry and cultivated Myrtaceae. Principles of the World Trade Organization’s Treaty on Sanitary and Phytosanitary Measures and the International Plant Protection Convention are consistent with the right of Hawaii to take action. The current threat of P. psidii and the other five serious threats to Myrtaceae are primarily posed by the importation of infected plants from the continental United States; however, that may change in the future. If Hawaii were to decide to take a stand (through State regulation) to protect its native and introduced Myrtaceae, there is a possibility that USDA would consider Federal regulation of Myrtaceae from foreign countries.

Hawaii↗

USGS2023

Synergistic soil, land use, and climate influences on wind erosion on the Colorado Plateau: Implications for management

Two decades of drought in the southwestern USA are spurring concerns about increases in wind erosion, dust emissions, and associated impacts on ecosystems, agriculture, human health, and water supply. Different avenues of investigation into primary drivers of wind erosion and dust have yielded mixed results depending on the spatial and temporal sensitivity of the evidence. We monitored passive aeolian sediment traps from 2017 to 2020 across eighty-one sites near Moab UT to understand patterns of sediment flux. At measurement sites we collated climate, soil, topography and vegetation spatial layers to better understand the context of wind erosion and then combine these data with field observations of land use in models to characterize the influence of cattle grazing, oil and gas well pads, and vehicle/heavy equipment disturbance that potentially drive both exposure of bare soil and increases in erodible sediment supply that increase vulnerability to erosion. Disturbed areas with low soil calcium carbonate content yielded high sediment transport in dry years, but notably areas with little disturbance and low bare soil exposure had much less activity. Cattle grazing had the largest land use association with erosional activity with analyses suggesting that both herbivory and trampling from cattle could be drivers. The amount and distribution of bare soil exposure from new sub-annual fractional cover remote sensing products proved very helpful in mapping erosion, and new predictive maps informed by field data are presented to help depict spatial patterns of wind erosion activity. Our results suggest that despite the magnitude of current droughts, minimizing surface disturbance in vulnerable soils can mitigate a large portion of dust emissions. Results can help managers identify eroding areas where disturbance reduction and soil surface protection measures can be prioritized.

Science of the Total Environment↗

USGS2021

Solutions in microbiome engineering: Prioritizing barriers to organism establishment

Microbiome engineering is increasingly being employed as a solution to challenges in health, agriculture, and climate. Often manipulation involves inoculation of new microbes designed to improve function into a preexisting microbial community. Despite, increased efforts in microbiome engineering inoculants frequently fail to establish and/or confer long-lasting modifications on ecosystem function. We posit that one underlying cause of these shortfalls is the failure to consider barriers to organism establishment. This is a key challenge and focus of macroecology research, specifically invasion biology and restoration ecology. We adopt a framework from invasion biology that summarizes establishment barriers in three categories: (1) propagule pressure, (2) environmental filtering, and (3) biotic interactions factors. We suggest that biotic interactions is the most neglected factor in microbiome engineering research, and we recommend a number of actions to accelerate engineering solutions.

The ISME Journal: Multidisciplinary Journal of Mic↗

USGS2011

Variable responses of fish assemblages, habitat, and stability to natural-channel-design restoration in Catskill Mountain streams

Natural-channel-design (NCD) restorations were recently implemented within large segments of five first- and second-order streams in the Catskill Mountains of New York in an attempt to increase channel stability, reduce bed and bank erosion, and sustain water quality. In conjunction with these efforts, 54 fish and habitat surveys were done from 1999 to 2007 at six restored reaches and five stable control reaches to evaluate the effects of NCD restoration on fish assemblages, habitat, and bank stability. A before–after–control–impact study design and two-factor analysis of variance were used to quantify the net changes in habitat and fish population and community indices at treatment reaches relative to those at unaltered control reaches. The density and biomass of fish communities were often dominated by one or two small prey species and no or few predator species before restoration and by one or more trout (Salmonidae) species after restoration. Significant increases in community richness (30%), diversity (40%), species or biomass equitability (32%), and total biomass (up to 52%) in at least four of the six restored reaches demonstrate that NCD restorations can improve the health and sustainability of fish communities in geomorphically unstable Catskill Mountain streams over the short to marginally long term. Bank stability, stream habitat, and trout habitat suitability indices (HSIs) generally improved significantly at the restored reaches, but key habitat features and trout HSIs did not change or decreased at two of them. Fish communities and trout populations at these two reaches were not positively affected by NCD restorations. Though NCD restorations often had a positive effect on habitat and fish communities, our results show that the initial habitat conditions limit the relative improvements than can be achieved, habitat quality and stability do not necessarily respond in unison, and biotic and abiotic responses cannot always be generalized.

New York↗

USGS2014

Why bother about wildlife disease?

In most developed countries, the maintenance of the numbers of wildlife 1 is vested in the natural resource agencies of those countries. During earlier times, game species were the primary focus of natural resource agencies 2,3 however, current wildlife conservation continues to transition towards a more holistic focus on biodiversity 4 and environmental health 5,6 . Nevertheless, that transition lags behind in addressing wildlife disease in “…the struggle for existence between different forms of life…”. 7 Thus, the primary objective of this presentation is to provide a pragmatic assessment of wildlife disease that is irrespective of one’s orientation towards wildlife conservation. A secondary objective is to highlight the changing role of disease over time as a wildlife conservation factor. That transition is relevant to the insights provided for current and future efforts focused on sustaining global biodiversity and desired levels of wildlife populations in nature.

Circular↗

USGS2000

Interim report on the scientific investigations in the Animas River watershed, Colorado to facilitate remediation decisions by the U.S. Bureau of Land Management and the U.S. Forest Service, March 29, 2000 meeting, Denver, Colo.

INTRODUCTION The joint U.S. Department of the Interior and U.S. Department of Agriculture Abandoned Mine Lands Initiative (AMLI) was developed as a collaborative effort between the Federal land management agencies (FLMA, that is the U.S. Bureau of Land Management and the U.S. Forest Service) and the U.S. Geological Survey (USGS) in 1996. The stated goal of the AML Initiative was to develop a strategy for gathering and communicating the scientific information needed to develop effective and cost-efficient remediation of abandoned mines within the framework of a watershed. Four primary objectives of the AMLI are to: 1. Provide the scientific information needed (in the short-term) by the FLMAs to make decisions related to the design and implementation of cleanup actions, 2. Develop a multi-disciplined, multi-division approach that integrates geologic, hydrologic, geochemical and ecological information into a knowledge base for sound decision making, 3. Transfer technologies developed within the scientific programs of the USGS to the field and demonstrate their suitability to solve real, practical problems, and 4. Establish working relationships among involved members of land management and regulatory agencies within the framework of a watershed approach to the cleanup of abandoned mines. Long-term process-based research, including development of analytical tools, is recognized as being critical to the long-term success in remediating watersheds impacted by historical mining activities (AML 5-year plan, http://amli.usgs.gov/amli). In a meeting of Federal agencies (U.S. Bureau of Land Management [BLM], U.S. Bureau of Reclamation [BOR], U.S. National Park Service [NPS], U.S. Forest Service [USFS], the U.S. Environmental Protection Agency [EPA], the U.S. Fish and Wildlife Service [F&WS]), and State agencies (Colorado Division of Public Health and Environment, Colorado Division of Mines and Geology), several watersheds were examined within the state whose water quality was presumed to be impacted by historical mining activities. The Animas River watershed (fig. 1) was selected by the State and Federal agencies as one of two watersheds in the U.S. to be studied in detail by the USGS in the AML Initiative. Beginning in October 1997, each of the four Divisions of the USGS (Water Resources, Geologic, Biological Resources, and National Mapping) initiated a collaborative integrated science study of the watershed. Funds were provided from USGS base funding to each of the four Divisions in response to the priorities set by Congressional action and within the flexibility provided by the budgetary framework funding individual research programs. The AML Initiative provides for a five-year focused scientific effort in the two watersheds with final synthesis of the scientific results from each to be published in 2001. Publications are released on the AML web site on a regular basis (http://amli.usgs.gov/amli). On March 29, 2000, the USGS hosted a meeting for the BLM and USFS to discuss remediation options that were under consideration for the summer of 2000. The purpose of this report is to provide an overview of the scientific rational provided by the USGS to meet objective one above, and to summarize our preliminary interpretations of our data. Additional information from sites on private lands have been collected by the State of Colorado, EPA, and the ARSG. Unfortunately, these data have not been fully supplied to the USGS so our conclusions are based only upon our data. These interpretations provide science-based constraints on possible remediation options to be considered by the FLMA, the State, and local property owners in the Animas River watershed. The report is presented in outline format to facilitate discussion of remediation options at the March 29, 2000 meeting. Not all historical mining sites within the watershed are on public lands. This should not be construed to be a final report of the USGS

Denver↗

USGS2014

Water quality and algal conditions in the North Umpqua River, Oregon, 1995-2007, and their response to Diamond Lake restoration

The Wild and Scenic North Umpqua River is one of the highest-quality waters in the State of Oregon, supporting runs of wild salmon, steelhead, and trout. For many years, blooms of potentially toxic blue-green algae in Diamond and Lemolo Lakes have threatened water quality, fisheries, and public health. The blooms consist primarily of Anabaena , a nitrogen (N)-fixing planktonic alga that appears to have contributed to N enrichment, which could account for changes in communities and biomass of periphyton, or attached benthic algae, in the river. Periphyton can become a nuisance in summer by affecting riffle habitat and causing high pH that fails to meet State of Oregon water-quality standards. These symptoms of nutrient enrichment in the North Umpqua River were first documented in 1995, and the symptoms have continued since then. Restoring natural ecosystem processes that store nutrients rather than fueling algae might help improve pH and water-clarity conditions. This report summarizes the results from a study in 2005–07 characterizing water quality and algal conditions in the North Umpqua River before, during, and after the 2006 rotenone treatment of Diamond Lake in the headwaters of the North Umpqua River. The treatment was part of a restoration project to eradicate Tui chub ( Gila bicolor ), a non-native invasive fish blamed for decimating the trout fishery in Diamond Lake and fueling Anabaena blooms. Diamond Lake was expected to contribute organic matter and associated nutrients to Lake Creek during the project, but it was unclear whether these nutrients would affect periphyton communities in the North Umpqua River downstream. This study also provided an opportunity to examine changes in stream conditions in the main stem North Umpqua River and its tributaries, which were previously sampled in July 1995. The 1995 study was designed to provide background data during relicensing of the upstream hydroelectric facilities, and was partly motivated by anecdotal concerns about increase periphyton growth and reduced water clarity. As part of the 2005–07 study associated with the Diamond Lake restoration project, we repeated the 1995 basinwide synoptic survey in 2005, before the rotenone treatment. Although both samplings were just a snapshot of conditions, these data were evaluated for possible changes between 1995 and 2005.

Oregon↗

USGS2009

Water-Quality and Biological Assessment of the Iowa River and Tributaries Within and Contiguous to the Meskwaki Settlement of the Sac and Fox Tribe of the Mississippi in Iowa, 2006-07

In cooperation with the Sac and Fox Tribe of the Mississippi in Iowa (Meskwaki Nation), the U.S. Geological Survey conducted a 2-year baseline assessment of the chemical and biological quality of streams within the Meskwaki Settlement in central Iowa. The Meskwaki Nation is a federally recognized tribe that wishes to establish water-quality standards to safeguard the integrity of surface waters and aquatic biota within the settlement for the health and welfare of the tribal community. The settlement is drained by the Iowa River and four tributaries (Onion, Cattail, Raven, and Bennett Creeks). Water-quality samples were collected at three sites on the Iowa River, two sites on Onion Creek, and one site each on Cattail, Raven, and Bennett Creeks from April 2006 through July 2007. Biological and habitat assessments were conducted at all three sites on the Iowa River and the downstream-most site on Onion Creek from June through August 2007. Analysis of physical properties, major ions, nutrients, trace compounds, bacteria, and total suspended solids in water, and trace metals and organic compounds in streambed sediment provided information about the effects of anthropogenic (human related) activities on the water quality of settlement streams. Analysis of biological samples collected during the summer of 2007, including fish community, benthic macroinvertebrates, and periphyton samples, as well as physical habitat characteristics, provided information on the effects of water quality on the condition of the aquatic environment. The majority of surface water sampled within the settlement was predominately a calcium bicarbonate type. Nitrates (nitrate plus nitrite as nitrogen) exceeded the U.S. Environmental Protection Agency's (USEPA) primary drinking-water Maximum Contaminant Level of 10 ug/L in 19 of 36 samples from sites on the Iowa River and Raven and Bennett Creeks but not in samples from Onion and Cattail Creeks. None of the samples analyzed for pesticides, trace metals, wastewater, or fuel contaminants were found to exceed drinking-water regulations for the USEPA or State of Iowa targeted constituents. Bacteria densities for Escherichia coli (E. coli) ranged from less than 10 to more than 600,000 colony-forming units per 100 milliliters of water and were largest following intense rainfall runoff. The largest densities were recorded in samples collected from the tributaries, most notably from Cattail Creek downstream from the tribal headquarters area and Onion Creek downstream from the sewage lagoons. Arsenic and nickel concentrations in bottom sediment from Onion Creek exceeded the USEPA threshold effects level in a composite sample collected during the habitat assessment in July 2007. Suspended-sediment concentration was estimated in terms of total suspended solids. Overall, Onion and Bennett Creeks were the least turbid, whereas the ephemeral Cattail Creek had the most turbid samples. Aquatic-community data were collected at four sites on the Meskwaki Settlement during the summer of 2007 to provide a baseline biological assessment of stream conditions. This assessment was based on sampling of the fish, benthic macroinvertebrate, and periphyton communities along with physical habitat characteristics. Individual biological metrics were derived from the data collected during the community surveys. These metrics were used to calculate Indexes of Biological Integrity (IBIs). The calculated values from the IBIs provided a numerical value that was used to provide an assessment of the biological condition at each biological sampling site. The fish community samples indicated that all of the sampling sites would be considered in fair condition, with one exception being a collection site on the Iowa River at Highway 49 near Tama, Iowa, which was classified in poor condition. The benthic macroinvertebrate IBI indicated a classification of good for three of the four biological sampling sites, with the Iowa River near Montour, Iowa,

Scientific Investigations Report↗

USGS2002

Distribution and mass loss of volatile organic compounds in the surficial aquifer at sites FT03, LF13, and WP14/LF15, Dover Air Force Base, Delaware, November 2000–February 2001

Ground-water and surface-water sampling was conducted in the natural attenuation study area in the East Management Unit of Dover Air Force Base, Delaware to determine the distributions of volatile organic compounds in the vicinity of four sites?Fire Training Area Three, the Rubble Area Landfill, the Receiver Station Landfill, and the Liquid Waste Disposal Landfill. This work was done by the U.S. Geological Survey, in cooperation with the U.S. Air Force, as part of an ongoing assessment of the effectiveness of natural attenuation at these sites. The specific objectives of the study were to (1) determine the areal and vertical extent of the contaminant plumes and source areas, (2) measure volatile organic compound concentrations in ground-water discharge areas and in surface water under base-flow conditions, (3) evaluate the potential for off-site migration of the mapped plumes, and (4) estimate the amount of mass loss downgradient of the Liquid Waste Disposal and Receiver Station Landfills. A direct-push drill rig and previously installed multi-level piezometers were used to determine the three-dimensional distributions of volatile organic compounds in the 30?60-foot-thick surficial aquifer underlying the natural attenuation study area. A hand -driven mini-piezometer was used to collect ground-water samples in ground-water discharge areas. A total of 319 ground-water and 4 surface-water samples were collected from November 2000 to February 2001 and analyzed for chlorinated solvents and fuel hydrocarbons. The contaminant plumes migrating from Fire Training Area Three and the Rubble Area Landfill are approximately 500 feet and 800 feet, respectively, in length. These plumes consist predominantly of cis-1,2-dichloroethene, a daughter product, indicating that extensive dechlorination of tetrachloroethene and trichloroethene has occurred at these sites. With an approximate length of 2,200 feet, the plume migrating from the Receiver Station and Liquid Waste Disposal Landfills is the largest of the three plumes in the East Management Unit. In this plume, the parent compounds, tetrachloroethene and trichloroethene, as well as cis-1,2-dichloroethene, are present downgradient of the source. Vinyl chloride was not detected in the natural attenuation study area. Vertical water-quality profiles indicate that volatile organic compounds are present mainly in the upper part of the surficial aquifer. Plumes of fuel hydrocarbon constituents were not detected in the natural attenuation study area. Volatile organic compounds were present at concentrations above detection limits in 6 of 14 samples collected from the aquifer underlying the bed of Pipe Elm Branch and the drainage ditch adjacent to Fire Training Area Three, indicating that the plumes migrating from Fire Training Area Three and the Receiver Station and Liquid Waste Disposal Landfills are reaching these ground-water discharge areas. In contrast, sampling results indicated that the plume from the Rubble Area Landfill does not reach these ground-water discharge areas. Trichloroethene was present above detection limits in one of four surface-water samples collected from Pipe Elm Branch and the drainage ditch adjacent to Fire Training Area Three. The trichloroethene concentration is below applicable Delaware Department of Natural Resources and Environmental Control surface-water-quality standards for human health. An assessment of chlorinated-solvent mass loss in the plume migrating from the Receiver Station and Liquid Waste Disposal Landfills indicates that tetrachloroethene and trichloroethene mass loss downgradient of the source is negligible. Cis-1,2-dichloroethene, however, appears to biodegrade by an unidentified reaction in the plume. Plan-view maps of the plume migrating from the Receiver Station and Liquid Waste Disposal Landfills indicate that tetrachloroethene, trichloroethene, and cis-1,2-dichloroethene may migrate off Dover Air Force Base property approximately 1,500 f

Delaware↗

USGS2022

What drought means for southwestern landscapes

Introduction Each year, more than 20,000 people raft the Grand Canyon, many of whom will experience this iconic landscape for the first and only time. Visitors to our region for their once-in-a-lifetime Grand Canyon experience might be surprised to see forests and wetlands in addition to deserts. While locals are seeing changes to the Colorado Plateau woodlands, many visitors may not be able to distinguish between our normal desert landscapes (we have cactus!) and the increasingly dry and hot conditions we have experienced in recent decades. Helping visitors see these drought impacts could help communicate that climate change is not a problem for future generations but something affecting us now. The southwestern US (“Southwest”) is one of many dry regions around the world located within about 30 degrees of the equator. As global temperatures rise, these dry zones are getting drier and are likely expanding1. Dryland expansion and aridification alters water availability, which touches our lives and ecosystem health in the Southwest. This essay focuses on drought impacts on ecosystems across the Four-Corners region and Grand Canyon, with particular attention to the forests and woodlands that contribute, in part, to Colorado River flows.

Arizona, California, Nevada↗