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At least 469 records · Page 26Linked to original sources

Elevated streamflows increase dam passage by juvenile coho salmon during winter: Implications of climate change in the Pacific Northwest

A 4-year evaluation was conducted to determine the proportion of juvenile coho salmon Oncorhynchus kisutch passing Cowlitz Falls Dam, on the Cowlitz River, Washington, during winter. River and reservoir populations of coho salmon parr were monitored using radiotelemetry to determine if streamflow increases resulted in increased downstream movement and dam passage. This was of interest because fish that pass downstream of Cowlitz Falls Dam become landlocked in Riffe Lake and are lost to the anadromous population. Higher proportions of reservoir-released fish (0.391-0.480) passed Cowlitz Falls Dam than did river-released fish (0.037-0.119). Event-time analyses demonstrated that streamflow increases were important predictors of dam passage rates during the study. The estimated effect of increasing streamflows on the risk of dam passage varied annually and ranged from 9% to 75% for every 28.3 m 3 /s increase in streamflow. These results have current management implications because they demonstrate the significance of dam passage by juvenile coho salmon during winter months when juvenile fish collection facilities are typically not operating. The results also have future management implications because climate change predictions suggest that peak streamflow timing for many watersheds in the Pacific Northwest will shift from late spring and early summer to winter. Increased occurrence of intense winter flood events is also expected. Our results demonstrate that juvenile coho salmon respond readily to streamflow increases and initiate downstream movements during winter months, which could result in increased passage at dams during these periods if climate change predictions are realized in the coming decades.

Washington

Colonial waterbird predation on Lost River and Shortnose suckers in the Upper Klamath Basin

We evaluated predation on Lost River Suckers Deltistes luxatus and Shortnose Suckers Chasmistes brevirostris by American white pelicans Pelecanus erythrorhynchos and double-crested cormorants Phalacrocorax auritus nesting at mixed-species colonies in the Upper Klamath Basin of Oregon and California during 2009–2014. Predation was evaluated by recovering (detecting) PIT tags from tagged fish on bird colonies and calculating minimum predation rates, as the percentage of available suckers consumed, adjusted for PIT tag detection probabilities but not deposition probabilities (i.e., probability an egested tag was deposited on- or off-colony). Results indicate that impacts of avian predation varied by sucker species, age-class (adult, juvenile), bird colony location, and year, demonstrating dynamic predator–prey interactions. Tagged suckers ranging in size from 72 to 730 mm were susceptible to cormorant or pelican predation; all but the largest Lost River Suckers were susceptible to bird predation. Minimum predation rate estimates ranged annually from <0.1% to 4.6% of the available PIT-tagged Lost River Suckers and from <0.1% to 4.2% of the available Shortnose Suckers, and predation rates were consistently higher on suckers in Clear Lake Reservoir, California, than on suckers in Upper Klamath Lake, Oregon. There was evidence that bird predation on juvenile suckers (species unknown) in Upper Klamath Lake was higher than on adult suckers in Upper Klamath Lake, where minimum predation rates ranged annually from 5.7% to 8.4% of available juveniles. Results suggest that avian predation is a factor limiting the recovery of populations of Lost River and Shortnose suckers, particularly juvenile suckers in Upper Klamath Lake and adult suckers in Clear Lake Reservoir. Additional research is needed to measure predator-specific PIT tag deposition probabilities (which, based on other published studies, could increase predation rates presented herein by a factor of roughly 2.0) and to better understand biotic and abiotic factors that regulate sucker susceptibility to bird predation.

California, Oregon

Habitat use and feeding ecology of riverine juvenile American shad

We examined premigratory populations of American shad Alosa sapidissima in the upper Delaware River to determine habitat and microhabitat use, differential prey use among habitat types, and habitat suitability indices for this previously unmodeled life stage. Both seining and diving techniques were used to quantify juveniles in six habitat types with six physical habitat covariables. Plankton and drift samples also were compared with stomach contents within habitats. We found no relation between relative abundance of juveniles and habitat type, which suggests general use of most riverine habitats. Physical habitat variables likewise did not affect use of habitat within ranges recorded, with two exceptions: (1) a positive relationship between abundance and water temperature in riffles and (2) a positive relationship between abundance and percent submerged aquatic vegetation (SAV) cover in SAV habitats. Opportunistic use of prey items was apparent; however, juveniles selected chironomid larvae and pupae and adult terrestrial insects and avoided ephemeropterans. Overlap between diets and available prey was high for most habitat types ( C λ mean = 0.71), especially for riffles ( C λ = 0.91). However, overlap for juveniles foraging at tributary mouths, where they strongly selected adult terrestrial insects, was low ( C λ = 0.49).

Pennsylvania

Detecting the response of fish assemblages to stream restoration: Effects of different sampling designsf

Increased trout production within limited stream reaches is a popular goal for restoration projects, yet investigators seldom monitor, assess, or publish the associated effects on fish assemblages. Fish community data from a total of 40 surveys at restored and reference reaches in three streams of the Catskill Mountains, New York, were analyzed a posteriori to determine how the ability to detect significant changes in biomass of brown trout Salmo trutta, all salmonids, or the entire fish community differs with effect size, number of streams assessed, process used to quantify the index response, and number of replicates collected before and after restoration. Analyses of statistical power (probability of detecting a meaningful difference or effect) and integrated power (average power over all possible ??-values) were combined with before-after, control-impact analyses to assess the effectiveness of alternate sampling and analysis designs. In general, the more robust analyses indicated that biomass of brown trout and salmonid populations increased significantly in restored reaches but that the net increases (relative to the reference reach) were significant only at two of four restored reaches. Restoration alone could not account for the net increases in total biomass of fish communities. Power analyses generally showed that integrated power was greater than 0.95 when (1) biomass increases were larger than 5.0 g/m2, (2) the total number of replicates ranged from 4 to 8, and (3) coefficients of variation (CVs) for responses were less than 40%. Integrated power was often greater than 0.95 for responses as low as 1.0 g/m2 if the response CVs were less than 30%. Considering that brown trout, salmonid, and community biomass increased by 2.99 g/m2 on average (SD= 1.17 g/m2) in the four restored reaches, use of two to three replicates both before and after restoration would have an integrated power of about 0.95 and would help detect significant changes in fish biomass under similar situations. ?? Copyright by the American Fisheries Society 2008.

North American Journal of Fisheries Management

Review of techniques to prevent introduction of zebra mussels (Dreissena polymorpha) during native mussel (Unionoidea) conservation activities

Because of the declines in diversity and abundance of native freshwater mussels (superfamily Unionoidea), and the potential decimation of populations of native mussels resulting from the rapid spread of the exotic zebra mussel Dreissena polymorpha, management options to eliminate or reduce the threat of the zebra mussel are needed. Relocating native mussels to refugia (artificial and natural) has been proposed to mitigate the threat of zebra mussels to native species. Relocation of native mussels to refugia such as fish hatchery facilities or natural habitats within their historic range. Which are unlikely to be infested by zebra mussels, necessitates that protocols be developed to prevent the inadvertent introduction of zebra mussels. Several recent studies have developed Such protocols, and have assessed their effectiveness on the health and survival of native mussels during subsequent relocation to various refugia. The purpose of this project is to synthesize and evaluate the current protocols and to develop a set of procedures that resource managers and researchers should consider before conducting conservation activities in zebra mussel infested waters. We found that the existing protocols have many common points of concern, such as facility modification and suitability, zebra mussel risk assessment and management procedures, and health and disease management procedures. These conservation protocols may have broad applicability to other situations and locations. A summary and evaluation of the information in these main areas, along with recommended guidelines, are presented in this article.

Journal of Shellfish Research

A new panel of SNP markers for the individual identification of North American pumas

Pumas Puma concolor are one of the most studied terrestrial carnivores because of their widespread distribution, substantial ecological impacts, and conflicts with humans. Over the past decade, managing pumas has involved extensive efforts including the use of genetic methods. Microsatellites have been the most commonly used genetic markers; however, technical artifacts and little overlap of frequently used loci render large-scale comparison of puma genetic data across studies challenging. Therefore, a panel of genetic markers that can produce consistent genotypes across studies without the need for extensive calibrations is essential for range-wide genetic management of puma populations. Here, we describe the development of PumaPlex, a high-throughput assay to genotype 25 single nucleotide polymorphisms in pumas. We validated PumaPlex in 748 North American pumas Puma concolor couguar, and demonstrated its ability to generate reproducible genotypes and accurately identify individuals. Furthermore, in a test using fecal deoxyribonucleic acid (DNA) samples, we found that PumaPlex produced significantly more genotypes with fewer errors than 12 microsatellite loci, 8 of which are commonly used. Our results demonstrate that PumaPlex is a valuable tool for the genetic monitoring and management of North American puma populations. Given the analytical simplicity, reproducibility, and high-throughput capability of single nucleotide polymorphisms, PumaPlex provides a standard panel of markers that promotes the comparison of genotypes across studies and independent of the genotyping technology used.

Journal of Fish and Wildlife Management

Long-term population dynamics of a managed burrowing owl colony

We analyzed the population dynamics of a burrowing owl (Athene cunicularia) colony at Mineta San Jose International Airport in San Jose, California, USA from 1990-2007. This colony was managed by using artificial burrows to reduce the occurrence of nesting owls along runways and within major airport improvement projects during the study period. We estimated annual reproduction in natural and artificial burrows and age-specific survival rates with mark-recapture techniques, and we estimated the relative contribution of these vital rates to population dynamics using a life table response experiment. The breeding colony showed 2 distinct periods of change: high population growth from 7 nesting pairs in 1991 to 40 pairs in 2002 and population decline to 17 pairs in 2007. Reproduction was highly variable: annual nesting success (pairs that raised =1 young) averaged 79% and ranged from 36% to 100%, whereas fecundity averaged 3.36 juveniles/pair and ranged from 1.43 juveniles/pair to 4.54 juveniles/pair. We estimated annual adult survival at 0.710 during the period of colony increase from 1996 to 2001 and 0.465 during decline from 2002 to 2007, but there was no change in annual survival of juveniles between the 2 time periods. Long-term population growth rate (lambda) estimated from average vital rates was lambda a =1.072 with lambda i =1.288 during colony increase and lambda d =0.921 (DELTA lambda=0.368) during decline. A life table response experiment showed that change in adult survival rate during increasing and declining phases explained more than twice the variation in growth rate than other vital rates. Our findings suggest that management and conservation of declining burrowing owl populations should address factors that influence adult survival.

California

Linking distribution and return-on-investment models to optimize woody management for prairie grouse in Nebraska

Grasslands in Nebraska, USA, face threats from agricultural conversion, urban development, and woody encroachment, all of which negatively affect prairie grouse ( Tympanuchus spp.) populations. To optimize conservation planning, Nebraska wildlife agencies developed probabilistic area-based surveys for greater prairie-chicken ( T. cupido ) and sharp-tailed grouse ( T. phasianellus ) to sample landscapes across a range of environmental conditions. This design improves historical surveys and enables the development of distribution models that quantitatively define habitat associations and support scenario-based conservation planning. Using survey data collected during 2020–2022, we modeled prairie grouse occurrence and abundance as functions of land cover, topography, and climate using Bayesian logistic and zero-inflated negative binomial models with regularized horseshoe priors. We then conducted a maximum potential return-on-investment analysis of woody cover treatments, assuming sustained treatment success, relative to projected impacts of woody encroachment on prairie grouse populations by 2050. Among modeled associations were a positive association with grasslands having low woody cover and a negative association with grasslands having high woody cover. Across the 3-year period, median estimated annual populations were 142,380 for greater prairie-chicken (range of 95% CIs across years = 68,821–277,615) and 64,154 for sharp-tailed grouse (range of 95% CIs across years = 27,550–146,559). Under projected woody encroachment, mean predicted population declines were 10% for greater prairie-chicken (range of 95% CIs = 7–14%) and 6% for sharp-tailed grouse (range of 95% CIs = 5–7%). Areas with high prairie grouse density and low treatment costs in 2021, and high projected woody encroachment and population loss by 2050, offered the greatest return on investment for woody management. Return on investment was greatest in the northwestern Shortgrass Prairie ecoregion (northwestern Nebraska) for sharp-tailed grouse and the eastern Sandhills ecoregion (central Nebraska) for both species. These models underscore the value of evidence-based, quantitative approaches for prioritizing conservation actions on working lands. Scenario-based modeling could be extended to guide other treatments, such as optimizing restoration (e.g., Conservation Reserve Program) or incentivizing grassland persistence in areas with predicted climate resilience.

Nebraska

Linking stream-reach nitrogen loads and groundwater “reachsheds” to inform wastewater-nitrogen management actions, Cape Cod, Massachusetts

Study Region Cape Cod, Massachusetts, U.S.A. Study Focus Anthropogenic nitrogen (N) is a key factor in degrading groundwater and surface-water quality, particularly in coastal New England where onsite wastewater systems are prevalent. This study evaluated whether direct N-load measurements in streams on Cape Cod, Massachusetts, coupled with flow-path information from groundwater-flow models, can effectively identify potential land areas where nitrogen mitigation could substantially reduce loads to receiving waters. Nitrogen fluxes were measured along 63 stream reaches during winter and summer and paired with simulated groundwater recharge areas to identify and rank potential areas for reduction of nonpoint-source N inputs. New Hydrologic Insights for the Region Reach-scale nitrate-N loads ranged from −39.1–1182 kg-N/yr per 100 m of stream, indicating spatially variable groundwater inputs across seasons. “Reachsheds” — areas contributing groundwater recharge to specific stream reaches — were delineated using a regional groundwater-flow model. Strong correlations were found between observed N loads and land-use characteristics, especially the number of septic systems and total N inputs from the sum of considered sources. Observed N loads were moderately correlated with recharge area size and wastewater flow estimates. Correlating reach-specific groundwater N loads with land use and parcel-scale nitrogen-yield data identified reachsheds with the highest potential for N load reduction. This approach enables targeted implementation of restoration efforts to optimize nutrient management and support regional load reduction.

Massachusetts

Increases in flood magnitudes in California under warming climates

Downscaled and hydrologically modeled projections from an ensemble of 16 Global Climate Models suggest that flooding may become more intense on the western slopes of the Sierra Nevada mountains, the primary source for California’s managed water system. By the end of the 21st century, all 16 climate projections for the high greenhouse-gas emission SRES A2 scenario yield larger floods with return periods ranging 2–50 years for both the Northern Sierra Nevada and Southern Sierra Nevada, regardless of the direction of change in mean precipitation. By end of century, discharges from the Northern Sierra Nevada with 50-year return periods increase by 30–90% depending on climate model, compared to historical values. Corresponding flood flows from the Southern Sierra increase by 50–100%. The increases in simulated 50 year flood flows are larger (at 95% confidence level) than would be expected due to natural variability by as early as 2035 for the SRES A2 scenario.

California

Habitat use and movement of the endangered Arroyo Toad ( Anaxyrus californicus ) in coastal southern California

Information on the habitat use and movement patterns of Arroyo Toads ( Anaxyrus californicus ) is limited. The temporal and spatial characteristics of terrestrial habitat use, especially as it relates to upland use in coastal areas of the species' range, are poorly understood. We present analyses of radiotelemetry data from 40 individual adult toads tracked at a single site in coastal southern California from March through November of 2004. We quantify adult Arroyo Toad habitat use and movements and interpret results in the context of their life history. We show concentrated activity by both male and female toads along stream terraces during and after breeding, and, although our fall sample size is low, the continued presence of adult toads in the floodplain through the late fall. Adult toads used open sandy flats with sparse vegetation. Home-range size and movement frequency varied as a function of body mass. Observed spatial patterns of movement and habitat use both during and outside of the breeding period as well as available climatological data suggest that overwintering of toads in floodplain habitats of near-coastal areas of southern California may be more common than previously considered. If adult toads are not migrating out of the floodplain at the close of the breeding season but instead overwinter on stream terraces in near-coastal areas, then current management practices that assume toad absence from floodplain habitats may be leaving adult toads over-wintering on stream terraces vulnerable to human disturbance during a time of year when Arroyo Toad mortality is potentially highest.

California

Distribution and transport of Olympia oyster, Ostrea lurida, larvae in northern Puget Sound, Washington, USA

As efforts for restoring Olympia oyster (Ostrea lurida) populations have expanded, there is an increased need to understand local factors that could influence the long-term success of these projects. To address concerns over potential limitations to recruitment at a restoration site in northern Puget Sound, Washington, USA, a study was developed to characterize physical processes governing larval transport in conjunction with larval abundance and environmental factors. Larval presence was not associated with tide cycle, season, or a combination of tide cycle and season. In terms of location, larvae were more likely to be present at offshore and intertidal sites versus the estuarine lagoon where the adult population resides. Larval density was higher during late summer ebbs versus early summer floods. Across sampling dates and locations, larval sizes ranged from 184 to 263 µm, indicating that larvae were released into the water column throughout the reproductive season and retained in the embayment for at least ~16 days. Throughout different tidal cycles in Skagit Bay, acoustic Doppler current profilers were used to measure current direction and velocities, concurrent with plankton sampling. Surface currents in the study area alternated between a clockwise and counterclockwise gyre during initial ebb and flood tides, respectively. Larvae exported from the source population during initial to mid-ebbs are swept into a northward gyre, and potentially retained at intertidal sites alongshore. These results will provide resource managers attempting to restore native bivalves with the ability to expand populations by identifying optimal areas for habitat enhancement through natural recruitment.

Washington

Preservation of genetic variation in the Green Lake strain lake trout derived from remnant domestic and feral populations

The Green Lake, Wisconsin, strain of lake trout Salvelinus namaycush was discontinued as a hatchery brood stock in 1976 after Lake Michigan was stocked with the 1975 year‐class. In 1982, a decision was made to restore the Green Lake strain as a production brood stock. Five groups were produced by spawning marked fish that were survivors from the 1976 stocking of southern Lake Michigan. A sixth group was produced from a remnant of the Green Lake brood stock held at the Genoa (Wisconsin) National Fish Hatchery. Hatchery accidents reduced both the number of groups and the effective population number of each group. We studied a procedure for reconstructing a composite Green Lake brood stock from individuals of these six groups. Genetic variability was evaluated by allozyme electrophoresis in five of these groups. Twelve of 18 loci were polymorphic. Allelic frequencies were similar in all five groups; however, significant differences occurred in nine systems. Heterozygosity level (mean ± SE) was lowest in the domestic group (0.119 ± 0.043) and ranged from 0.139 ± 0.043 to 0.166 ± 0.052 in the feral groups. Cluster analysis of genetic distances grouped the four feral groups together, but separate from the domestic group. Progeny from fish captured on Black Can Reef, Lake Michigan, in 1986 and 1988 were the most similar. A modified diallel mating design was developed to produce a composite brood stock from remnant feral and domestic fish. Pooled families from 1991 and 1992 diallel matings will be reared to maturity, then reciprocal crosses of the two year‐classes will be made to form the new composite Green Lake brood stock.

Wisconsin

Breeding patterns and reproductive success of California sea otters

Following commercial exploitation in the eighteenth and nineteenth centuries, sea otter ( Enhydra lutris ) populations in Alaska, British Columbia, and Washington recovered at 17-20% a year, yet the California population increased at only 5% a year. This slow rate of increase is perplexing, given that unoccupied and apparently favorable habitats occur throughout the sea otter's California range, and higher growth rates occurred among northern sea otter populations. Better knowledge of the demography of the California population is important in understanding these disparate population growth rates. We studied the reproductive biology and behavior of 53 tagged female sea otters from 1985 to 1991 in Monterey Bay, California. During the study, 136 pups were born to these females. Observations of each female enabled us to determine exact or estimated pup birth dates, which we used to calculate lengths of gestation, pup dependency, and reproductive cycle. Seasonal trends in pupping, in the proportion of adult females with pups, and in pup separations from their mothers were relatively uniform throughout the year. The average interval between separation from pup and subsequent birth was 198 days, the interbirth interval was 407 days, and estimated birth rate was 0.90/year for all adult females. For females that pupped annually (did not lose undetected newborns), the average interbirth interval was 342 days, given an estimated birth rate of 1.07/year. Length of the reproductive cycle increased with increasing length of prior pup dependency. However, the interval between separation from pup and subsequent birth was delayed among females that prematurely lost their pups. The average length of dependency for pups that survived to weaning was 166 days, but ranged from 120 to 280 days. The maximum preweaning survival rate was 0.60-0.65, less than values measured or inferred for some Alaskan populations. Most pups that did not survive to weaning were lost within a month of birth. The probability of successfully weaning pups and the length of dependency increased ( P = 0.077) with mothers' ages, thus indicating that reproductive success may increase among females with greater mothering experience. The high preweaning pup mortality we observed probably accounts for much of the relatively slow growth rate of the California sea otter population.

California

How much is new information worth? Evaluating the financial benefit of resolving management uncertainty

Conservation decision-makers face a trade-off between spending limited funds on direct management action, or gaining new information in an attempt to improve management performance in the future. Value-of-information analysis can help to resolve this trade-off by evaluating how much management performance could improve if new information was gained. Value-of-information analysis has been used extensively in other disciplines, but there are only a few examples where it has informed conservation planning, none of which have used it to evaluate the financial value of gaining new information. We address this gap by applying value-of-information analysis to the management of a declining koala Phascolarctos cinereus population. Decision-makers responsible for managing this population face uncertainty about survival and fecundity rates, and how habitat cover affects mortality threats. The value of gaining new information about these uncertainties was calculated using a deterministic matrix model of the koala population to find the expected population growth rate if koala mortality threats were optimally managed under alternative model hypotheses, which represented the uncertainties faced by koala managers. Gaining new information about survival and fecundity rates and the effect of habitat cover on mortality threats will do little to improve koala management. Across a range of management budgets, no more than 1&middot;7% of the budget should be spent on resolving these uncertainties. The value of information was low because optimal management decisions were not sensitive to the uncertainties we considered. Decisions were instead driven by a substantial difference in the cost efficiency of management actions. The value of information was up to forty times higher when the cost efficiencies of different koala management actions were similar. Synthesis and applications . This study evaluates the ecological and financial benefits of gaining new information to inform a conservation problem. We also theoretically demonstrate that the value of reducing uncertainty is highest when it is not clear which management action is the most cost efficient. This study will help expand the use of value-of-information analyses in conservation by providing a cost efficiency metric by which to evaluate research or monitoring.

Journal of Applied Ecology

Age-class separation of blue-winged ducks

Accurate determination of age is of fundamental importance to population and life history studies of waterfowl and their management. Therefore, we developed quantitative methods that separate adult and immature blue-winged teal ( Anas discors ), cinnamon teal ( A. cyanoptera ), and northern shovelers ( A. clypeata ) during spring and summer. To assess suitability of discriminant models using 9 remigial measurements, we compared model performance (% agreement between predicted age and age assigned to birds on the basis of definitive cloacal or rectral feather characteristics) in different flyways (Mississippi and Pacific) and between years (1990-91 and 1991-92). We also applied age-classification models to wings obtained from U.S. Fish and Wildlife Service harvest surveys in the Mississippi and Central-Pacific flyways (wing-bees) for which age had been determined using qualitative characteristics (i.e., remigial markings, shape, or wear). Except for male northern shovelers, models correctly aged lt 90% (range 70-86%) of blue-winged ducks. Model performance varied among species and differed between sexes and years. Proportions of individuals that were correctly aged were greater for males (range 63-86%) than females (range 39-69%). Models for northern shovelers performed better in flyway comparisons within year (1991-92, La. model applied to Calif. birds, and Calif. model applied to La. birds: 90 and 94% for M, and 89 and 76% for F, respectively) than in annual comparisons within the Mississippi Flyway (1991-92 model applied to 1990-91 data: 79% for M, 50% for F). Exclusion of measurements that varied by flyway or year did not improve model performance. Quantitative methods appear to be of limited value for age separation of female blue-winged ducks. Close agreement between predicted age and age assigned to wings from the wing-bees suggests that qualitative and quantitative methods may be equally accurate for age separation of male blue-winged ducks. We interpret annual and flyway differences in remigial measurements and reduced performance of age classification models as evidence of high variability in size of blue-winged ducks' remiges. Variability in remigial size of these and other small-bodied waterfowl may be related to nutrition during molt.

Louisiana

Mycoplasmosis and upper respiratory tract disease of tortoises: a review and update

Tortoise mycoplasmosis is one of the most extensively characterized infectious diseases of chelonians. A 1989 outbreak of upper respiratory tract disease (URTD) in free-ranging Agassiz's desert tortoises ( Gopherus agassizii ) brought together an investigative team of researchers, diagnosticians, pathologists, immunologists and clinicians from multiple institutions and agencies. Electron microscopic studies of affected tortoises revealed a microorganism in close association with the nasal mucosa that subsequently was identified as a new species, Mycoplasma agassizii . Over the next 24 years, a second causative agent, Mycoplasma testudineum , was discovered, the geographic distribution and host range of tortoise mycoplasmosis were expanded, diagnostic tests were developed and refined for antibody and pathogen detection, transmission studies confirmed the pathogenicity of the original M. agassizii isolate, clinical (and subclinical) disease and laboratory abnormalities were characterized, many extrinsic and predisposing factors were found to play a role in morbidity and mortality associated with mycoplasmal infection, and social behavior was implicated in disease transmission. The translation of scientific research into management decisions has sometimes led to undesirable outcomes, such as euthanasia of clinically healthy tortoises. In this article, we review and assess current research on tortoise mycoplasmosis, arguably the most important chronic infectious disease of wild and captive North American and European tortoises, and update the implications for management and conservation of tortoises in the wild.

The Veterinary Journal

Natural recharge estimation and uncertainty analysis of an adjudicated groundwater basin using a regional-scale flow and subsidence model (Antelope Valley, California, USA)

Groundwater has provided 50&ndash;90 % of the total water supply in Antelope Valley, California (USA). The associated groundwater-level declines have led the Los Angeles County Superior Court of California to recently rule that the Antelope Valley groundwater basin is in overdraft, i.e., annual pumpage exceeds annual recharge. Natural recharge consists primarily of mountain-front recharge and is an important component of the total groundwater budget in Antelope Valley. Therefore, natural recharge plays a major role in the Court&rsquo;s decision. The exact quantity and distribution of natural recharge is uncertain, with total estimates from previous studies ranging from 37 to 200 gigaliters per year (GL/year). In order to better understand the uncertainty associated with natural recharge and to provide a tool for groundwater management, a numerical model of groundwater flow and land subsidence was developed. The transient model was calibrated using PEST with water-level and subsidence data; prior information was incorporated through the use of Tikhonov regularization. The calibrated estimate of natural recharge was 36 GL/year, which is appreciably less than the value used by the court (74 GL/year). The effect of parameter uncertainty on the estimation of natural recharge was addressed using the Null-Space Monte Carlo method. A Pareto trade-off method was also used to portray the reasonableness of larger natural recharge rates. The reasonableness of the 74 GL/year value and the effect of uncertain pumpage rates were also evaluated. The uncertainty analyses indicate that the total natural recharge likely ranges between 34.5 and 54.3 GL/year.

California