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Results for “Functional Ecology”

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At least 469 records · Page 26Linked to original sources
USGS2016

Establishing a baseline of estuarine submerged aquatic vegetation resources across salinity zones within coastal areas of the northern Gulf of Mexico

Coastal ecosystems are dynamic and productive areas that are vulnerable to effects of global climate change. Despite their potentially limited spatial extent, submerged aquatic vegetation (SAV) beds function in coastal ecosystems as foundation species, and perform important ecological services. However, limited understanding of the factors controlling SAV distribution and abundance across multiple salinity zones (fresh, intermediate, brackish, and saline) in the northern Gulf of Mexico restricts the ability of models to accurately predict resource availability. We sampled 384 potential coastal SAV sites across the northern Gulf of Mexico in 2013 and 2014, and examined community and species-specific SAV distribution and biomass in relation to year, salinity, turbidity, and water depth. After two years of sampling, 14 species of SAV were documented, with three species (coontail [Ceratophyllum demersum], Eurasian watermilfoil [Myriophyllum spicatum], and widgeon grass [Ruppia maritima]) accounting for 54% of above-ground biomass collected. Salinity and water depth were dominant drivers of species assemblages but had little effect on SAV biomass. Predicted changes in salinity and water depths along the northern Gulf of Mexico coast will likely alter SAV production and species assemblages, shifting to more saline and depth-tolerant assemblages, which in turn may affect habitat and food resources for associated faunal species.

Gulf of Mexico↗
USGS2006

Characterizing the role benthos plays in large coastal seas and estuaries: A modular approach

Ecologists studying coastal and estuarine benthic communities have long taken a macroecological view, by relating benthic community patterns to environmental factors across several spatial scales. Although many general ecological patterns have been established, often a significant amount of the spatial and temporal variation in soft-sediment communities within and among systems remains unexplained. Here we propose a framework that may aid in unraveling the complex influence of environmental factors associated with the different components of coastal systems (i.e. the terrestrial and benthic landscapes, and the hydrological seascape) on benthic communities, and use this information to assess the role played by benthos in coastal ecosystems. A primary component of the approach is the recognition of system modules (e.g. marshes, dendritic systems, tidal rivers, enclosed basins, open bays, lagoons). The modules may differentially interact with key forcing functions (e.g. temperature, salinity, currents) that influence system processes and in turn benthic responses and functions. Modules may also constrain benthic characteristics and related processes within certain ecological boundaries and help explain their overall spatio-temporal variation. We present an example of how benthic community characteristics are related to the modular structure of 14 coastal seas and estuaries, and show that benthic functional group composition is significantly related to the modular structure of these systems. We also propose a framework for exploring the role of benthic communities in coastal systems using this modular approach and offer predictions of how benthic communities may vary depending on the modular composition and characteristics of a coastal system. ?? 2006 Elsevier B.V. All rights reserved.

Conference Paper↗
USGS2021

Are drought indices and climate data good indicators of ecologically relevant soil moisture dynamics in drylands?

Droughts are disproportionately impacting global dryland regions where ecosystem health and function are tightly coupled to moisture availability. Drought severity is commonly estimated using algorithms such as the standardized precipitation-evapotranspiration index (SPEI), which can estimate climatic water balance impacts at various hydrologic scales by varying computational length. However, the performance of these metrics as indicators of soil moisture dynamics at ecologically relevant scales, across soil depths, and in consideration of broader scale ecohydrological processes, requires more attention. In this study, we tested components of climatic water balance, including SPEI and SPEI computation lengths, to recreate multi-decadal and periodic soil-moisture patterns across soil profiles at 866 sites in the western United States. Modeling results show that SPEI calculated over the prior 12-months was the most predictive computation length and could recreate changes in moisture availability within the soil profile over longer periods of time and for annual recharge of deeper soil moisture stores. SPEI was slightly less successful with recreating spring surface-soil moisture availability, which is key to dryland ecosystems dominated by winter precipitation. Meteorological drought indices like SPEI are intended to be convenient and generalized indicators of meteorological water deficit. However, the inconsistent ability of SPEI to recreate ecologically relevant patterns of soil moisture at regional scales suggests that process-based models, and the larger data requirements they involve, remain an important tool for dryland ecohydrology

California, Idaho, Nevada, Oregon, Utah↗
USGS2011

Land management in the Anthropocene: Is history still relevant?

Ecological restoration, conservation, and land management are often based on comparisons with reference sites or time periods, which are assumed to represent “natural” or “properly functioning” conditions. Such reference conditions can provide a vision of the conservation or management goal and a means to measure progress toward that vision. Although historical ecology has been used successfully to guide resource management in many parts of the world, the continuing relevance of history is now being questioned. Some scientists doubt that lessons from the past can inform management in what may be a dramatically different future, given profound climate change, accelerated land use, and an onslaught of plant and animal invasions.

Conference Paper↗
USGS2014

Maintaining resilience in the face of climate change

Climate change, when combined with more conventional stress from human exploitation, calls into question the capacity of both existing ecological communities and resource management institutions to experience disturbances while substantially retaining their same functions and identities (Zellmer and Gunderson 2009; Ruhl 2011). In other words, the physical and biological effects of climate change raise fundamental challenges to the resilience of natural ecosystems (Gunderson and Holling 2002). Perhaps more importantly, the projected scope of ecological shifts from global climate change-and uncertainty about such changes-significantly stresses the capacity of legal institutions to manage ecosystem change (Camacho 2009). Existing governmental institutions lack the adaptive capacity to manage such substantial changes to ecological and legal systems. In particular, regulators and managers lack information about ecological effects and alternative management strategies for managing the effects of climate change (Karkkainen 2008; Camacho 2009), as well as the institutional infrastructure for obtaining such information (Peters 2008). A number of recent initiatives have been proposed to address the effects of climate change on ecological systems. However, these nascent programs do not fully meet the needs for developing adaptive capacity. A federal, publicly accessible, and system-wide portal and clearinghouse will help regulators at all levels of government manage the effects and uncertainty from climate change (DiMento and Ingram 2005; Farber 2007). Such an information infrastructure, combined with a range of incentives that encourage regulators to engage in adaptive management and programmatic adjustment over time (Baron et al. 2009), will help governmental and private institutions become more resilient and capable of managing the physical and human institutional effects of changing climate (Camacho 2009).

Book chapter↗
USGS2026

Relative influence of flow regime, natural and anthropogenic environment on multidimensional stream fish diversity

The flow regime is considered a ‘master variable’ in riverine ecology because it directly influences stream geomorphology and biological communities. However, other environmental and anthropogenic factors have direct and synergistic effects with flow on fish diversity, complicating estimates of the flow regime's true importance. Moreover, most flow-ecology studies focus only on taxonomic diversity (i.e., species), without considering functional (trait-focused) or phylogenetic (evolution-focused) dimensions of diversity. In this study, we used linear regression with variation partitioning to parse out the independent and shared roles of the flow regime, physical environmental factors (e.g., soil characteristics) and the anthropogenic environment (e.g., developed land cover) for structuring multidimensional diversity of 365 stream fish communities in two biogeographic regions across South Carolina, USA. These variables explained between 8% and 18% of total variation of the local diversity. The flow regime contributed to diversity in all cases, but frequently covaried with physical and/or anthropogenic environmental variables. This covariation indicated that the independent role of flow would have been inflated if other environmental variables were not considered. The three dimensions of stream fish diversity were weakly correlated with one another and were associated with different environmental variables, indicating that each of them represents unique and complimentary facets of fish diversity. Accordingly, only considering the independent effects of instream flow on fish diversity may miss meaningful interactions between the flow regime and the other components of the environment that influence biodiversity patterns, leading to over simplified flow–ecology relationships.

South Carolina↗
USGS2013

Practical guidance on characterizing availability in resource selection functions under a use-availability design

Habitat selection is a fundamental aspect of animal ecology, the understanding of which is critical to management and conservation. Global positioning system data from animals allow fine-scale assessments of habitat selection and typically are analyzed in a use-availability framework, whereby animal locations are contrasted with random locations (the availability sample). Although most use-availability methods are in fact spatial point process models, they often are fit using logistic regression. This framework offers numerous methodological challenges, for which the literature provides little guidance. Specifically, the size and spatial extent of the availability sample influences coefficient estimates potentially causing interpretational bias. We examined the influence of availability on statistical inference through simulations and analysis of serially correlated mule deer GPS data. Bias in estimates arose from incorrectly assessing and sampling the spatial extent of availability. Spatial autocorrelation in covariates, which is common for landscape characteristics, exacerbated the error in availability sampling leading to increased bias. These results have strong implications for habitat selection analyses using GPS data, which are increasingly prevalent in the literature. We recommend researchers assess the sensitivity of their results to their availability sample and, where bias is likely, take care with interpretations and use cross validation to assess robustness.

Ecology↗
USGS2025

Short-term ecological effects of solar energy development depend on plant community, soil type, and disturbance intensity

Solar energy is rapidly growing to decarbonize the electrical grid. Maintaining ecosystem function with solar energy generation can be promoted through construction methods that minimize negative impacts on soils and vegetation. However, the disturbance created by less-impactful construction methods at utility-scale solar energy (USSE) facilities and the ecosystem responses remain relatively unknown. We monitored soils and vegetation before and after the USSE build-out to assess the short-term impacts of construction on soils and vegetation at the Gemini Solar Project in the Mojave Desert. The facility was constructed with methods intended to be less impactful than traditional techniques. Our goal was to answer three questions: (1) What are the short-term effects of construction on soils and vegetation? (2) Do construction effects vary by the initial plant community and soil type? and (3) Does disturbance intensity from construction affect soil and vegetation response? We found strong evidence that the construction of the Gemini facility increased bare soil and soil compaction, and decreased dark biocrust cover and soil stability in the short term. For every 1% increase in disturbance intensity, we found a 0.23% increase in bare soil cover and a 0.10% decrease in dark biocrust cover. Plant responses varied more than soil responses and depended on the initial plant community and soil type, with decreases in plant canopy cover highest in sandy soils dominated by creosote bush ( Larrea tridentata ) and white bursage ( Ambrosia dumosa ) shrubs. Synthesis and applications : Many impacts of USSE facility construction depend on the underlying vegetation and soils and the level of disturbance intensity. The use of less-impactful construction methods, including a combination of overland travel and drive-and-crush examined in our study, can ameliorate negative effects relative to traditional construction practices and provide a pathway to maintain ecosystem function.

Journal of Applied Ecology↗
USGS2016

Managing adaptively for multifunctionality in agricultural systems

The critical importance of agricultural systems for food security and as a dominant global landcover requires management that considers the full dimensions of system functions at appropriate scales, i.e. multifunctionality. We propose that adaptive management is the most suitable management approach for such goals, given its ability to reduce uncertainty over time and support multiple objectives within a system, for multiple actors. As such, adaptive management may be the most appropriate method for sustainably intensifying production whilst increasing the quantity and quality of ecosystem services. However, the current assessment of performance of agricultural systems doesn’t reward ecosystem service provision. Therefore, we present an overview of the ecosystem functions agricultural systems should and could provide, coupled with a revised definition for assessing the performance of agricultural systems from a multifunctional perspective that, when all satisfied, would create adaptive agricultural systems that can increase production whilst ensuring food security and the quantity and quality of ecosystem services. The outcome of this high level of performance is the capacity to respond to multiple shocks without collapse, equity and triple bottom line sustainability. Through the assessment of case studies, we find that alternatives to industrialized agricultural systems incorporate more functional goals, but that there are mixed findings as to whether these goals translate into positive measurable outcomes. We suggest that an adaptive management perspective would support the implementation of a systematic analysis of the social, ecological and economic trade-offs occurring within such systems, particularly between ecosystem services and functions, in order to provide suitable and comparable assessments. We also identify indicators to monitor performance at multiple scales in agricultural systems which can be used within an adaptive management framework to increase resilience at multiple scales.

Journal of Environmental Management↗
USGS2019

The plant diversity sampling design for The National Ecological Observatory Network

The National Ecological Observatory Network (NEON) is designed to facilitate an understanding of the impact of environmental change on ecological systems. Observations of plant diversity—responsive to changes in climate, disturbance, and land use, and ecologically linked to soil, biogeochemistry, and organisms—result in NEON data products that cross a range of organizational levels. Collections include samples of plant tissue to enable investigations of genetics, plot‐based observations of incidence and cover of native and non‐native species, observations of plant functional traits, archived vouchers of plants, and remote sensing airborne observations. Spatially integrating many ecological observations allows a description of the relationship of plant diversity to climate, land use, organisms, and substrates. Repeating the observations over decades and across the United States will iteratively improve our understanding of those relationships and allow for the testing of system‐level hypotheses as well as the development of predictions of future conditions.

Ecosphere↗
USGS2007

A watershed approach to ecosystem monitoring in Denali National Park and preserve, Alaska

The National Park Service and the National Biological Service initiated research in Denali National Park and Preserve, a 2.4 million-hectare park in southcentral Alaska, to develop ecological monitoring protocols for national parks in the Arctic/Subarctic biogeographic area. We are focusing pilot studies on design questions, on scaling issues and regionalization, ecosystem structure and function, indicator selection and evaluation, and monitoring technologies. Rock Creek, a headwater stream near Denali headquarters, is the ecological scale for initial testing of a watershed ecosystem approach. Our conceptual model embraces principles of the hydrological cycle, hypotheses of global climate change, and biological interactions of organisms occupying intermediate, but poorly studied, positions in Alaskan food webs. The field approach includes hydrological and depositional considerations and a suite of integrated measures linking key aquatic and terrestrial biota, environmental variables, or defined ecological processes, in order to establish ecological conditions and detect, track, and understand mechanisms of environmental change. Our sampling activities include corresponding measures of physical, chemical, and biological attributes in four Rock Creek habitats believed characteristic of the greater system diversity of Denali. This paper gives examples of data sets, program integration and scaling, and research needs.

Journal of the American Water Resources Associatio↗
USGS2016

Combining statistical inference and decisions in ecology

Statistical decision theory (SDT) is a sub-field of decision theory that formally incorporates statistical investigation into a decision-theoretic framework to account for uncertainties in a decision problem. SDT provides a unifying analysis of three types of information: statistical results from a data set, knowledge of the consequences of potential choices (i.e., loss), and prior beliefs about a system. SDT links the theoretical development of a large body of statistical methods including point estimation, hypothesis testing, and confidence interval estimation. The theory and application of SDT have mainly been developed and published in the fields of mathematics, statistics, operations research, and other decision sciences, but have had limited exposure in ecology. Thus, we provide an introduction to SDT for ecologists and describe its utility for linking the conventionally separate tasks of statistical investigation and decision making in a single framework. We describe the basic framework of both Bayesian and frequentist SDT, its traditional use in statistics, and discuss its application to decision problems that occur in ecology. We demonstrate SDT with two types of decisions: Bayesian point estimation, and an applied management problem of selecting a prescribed fire rotation for managing a grassland bird species. Central to SDT, and decision theory in general, are loss functions. Thus, we also provide basic guidance and references for constructing loss functions for an SDT problem.

Ecological Applications↗
USGS2024

Functional turnover in a prairie-river fish community over 130 years

Objective In many Great Plains rivers, functional turnover—the change in proportional dominance of members in biological communities that fill certain ecological roles—has occurred due to impoundment and habitat alteration. The Powder River of Montana and Wyoming remains one of the few unregulated prairie rivers, but long-term monitoring is limited, so we analyzed changes over time at the functional, assemblage, and species levels. Methods We used fish sampling data from 43 different sources collected from 1893 to 2022 to analyze trends in fish communities. Result Across the main-stem Powder River, Sand Shiner Miniellus stramineus and Channel Catfish Ictalurus punctatus substantially increased in abundance, whereas Sturgeon Chub Macrhybopsis gelida decreased. While most other species did not show significant changes in relative abundance (although the always rare Lake Chub Couesius plumbeus may have been extirpated), significant functional turnover occurred in the upper river due to increases in generalist feeders, predators, omnivores, and cavity-guarding species, with declines in benthic feeders, invertivores, and pelagic broadcast spawners, among others. Community and functional changes were more substantial in the upper river than in the lower river, possibly due to augmented streamflow from a major tributary. Conclusion Functional turnover within the upper river was substantial despite the relative stability of most individual species, even when the Sand Shiner—the most significantly increasing species—was excluded from analysis. This suggests small but consistent increases and decreases within functional groups, which cumulatively are likely impacting the ecosystem. We hypothesize a complex set of mechanisms causing these changes that offer avenues for future work. The collation of data from disparate studies and the resampling of even a limited number of historical fish collection locations can greatly aid in identifying potential fish community changes in systems where monitoring is limited.

Montana, Wyoming↗
USGS2016

Wetland tree transpiration modified by river-floodplain connectivity

Hydrologic connectivity provisions water and nutrient subsidies to floodplain wetlands and may be particularly important in floodplains with seasonal water deficits through its effects on soil moisture. In this study, we measured sapflow in 26 trees of two dominant floodplain forest species ( Celtis laevigata and Quercus lyrata ) at two hydrologically distinct sites in the lower White River floodplain in Arkansas, USA. Our objective was to investigate how connectivity-driven water table variations affected water use, an indicator of tree function. Meteorological variables (photosynthetically active radiation and vapor pressure deficit) were the dominant controls over water use at both sites; however, water table variations explained some site differences. At the wetter site, highest sapflow rates were during a late-season overbank flooding event, and no flood stress was apparent. At the drier site, sapflow decreased as the water table receded. The late-season flood pulse that resulted in flooding at the wetter site did not affect the water table at the drier site; accordingly, higher water use was not observed at the drier site. The species generally associated with wetter conditions ( Q. lyrata ) was more positively responsive to the flood pulse. Flood water subsidy lengthened the effective growing season, demonstrating ecological implications of hydrologic connectivity for alleviating water deficits that otherwise reduce function in this humid floodplain wetland.

Arkansas↗
USGS2007

Genotype, soil type, and locale effects on reciprocal transplant vigor, endophyte growth, and microbial functional diversity of a narrow sagebrush hybrid zone in Salt Creek Canyon, Utah

When addressing the nature of ecological adaptation and environmental factors limiting population ranges and contributing to speciation, it is important to consider not only the plant's genotype and its response to the environment, but also any close interactions that it has with other organisms, specifically, symbiotic microorganisms. To investigate this, soils and seedlings were reciprocally transplanted into common gardens of the big sagebrush hybrid zone in Salt Creek Canyon, Utah, to determine location and edaphic effects on the fitness of parental and hybrid plants. Endophytic symbionts and functional microbial diversity of indigenous and transplanted soils and sagebrush plants were also examined. Strong selection occurred against the parental genotypes in the middle hybrid zone garden in middle hybrid zone soil; F1 hybrids had the highest fitness under these conditions. Neither of the parental genotypes had superior fitness in their indigenous soils and habitats; rather F1 hybrids with the nonindigenous maternal parent were superiorly fit. Significant garden-by-soil type interactions indicate adaptation of both plant and soil microorganisms to their indigenous soils and habitats, most notably in the middle hybrid zone garden in middle hybrid zone soil. Contrasting performances of F1 hybrids suggest asymmetrical gene flow with mountain, rather than basin, big sagebrush acting as the maternal parent. We showed that the microbial community impacted the performance of parental and hybrid plants in different soils, likely limiting the ranges of the different genotypes.

Utah↗
USGS2014

Can they dig it? Functional morphology and semifossoriality among small-eared shrews, genus Cryptotis (Mammalia, Soricidae)

Small-eared shrews (Mammalia: Soricidae: Cryptotis ), exhibit modifications of the forelimb skeleton that have been interpreted as adaptations for semifossoriality. Most species inhabit remote regions, however, and their locomotory and foraging behaviors remain mostly speculative. To better understand the morphological modifications in the absence of direct observations, we quantified variation in these species by measuring 151 individuals representing 18 species and populations of Cryptotis and two species of moles (Talpidae) for comparison. From our measurements, we calculated 22 indices, most of which have been used previously to characterize substrate use among rodents and other taxa. We analyzed the indices using 1) average percentile ranks, 2) principal components analysis, and 3) cluster analysis. From these analyses, we determined that three basic modes of substrate adaptation are present within Cryptotis : 1) a primarily terrestrial mode, with species that are capable of burrowing, but lack adaptations to increase digging efficiency, 2) a semifossorial mode, with species whose forelimbs bones show strong muscle attachment areas and increased mechanical advantage, and 3) an intermediate mode. In addition to identifying new morphological characters and contributing to our understanding of the functional morphology of soricids, these analyses provide additional insight into the ecology of the species of interest.

Journal of Morphology↗
USGS2013

Broad timescale forcing and geomorphic mediation of tidal marsh flow and temperature dynamics

Tidal marsh functions are driven by interactions between tides, landscape morphology, and emergent vegetation. Less often considered are the diurnal pattern of tide extremes and seasonal variation of solar insolation in the mix of tidal marsh driver interactions. This work demonstrates how high-frequency hydroperiod and water temperature variability emerges from disparate timescale interactions between tidal marsh morphology, tidal harmonics, and meteorology in the San Francisco Estuary. We compare the tidal and residual flow and temperature response of neighboring tidal sloughs, one possessing natural tidal marsh morphology, and one that is modified for water control. We show that the natural tidal marsh is tuned to lunar phase and produces tidal and fortnight water temperature variability through interacting tide, meteorology, and geomorphic linkages. In contrast, temperature variability is dampened in the modified slough where overbank marsh plain connection is severed by levees. Despite geomorphic differences, a key finding is that both sloughs are heat sinks in summer by latent heat flux-driven residual upstream water advection and sensible and long-wave heat transfer. The precession of a 335-year tidal harmonic assures that these dynamics will shift in the future. Water temperature regulation appears to be a key function of natural tidal sloughs that depends critically on geomorphic mediation. We investigate approaches to untangling the relative influence of sun versus tide on residual water and temperature transport as a function of system morphology. The findings of this study likely have ecological consequences and suggest physical process metrics for tidal marsh restoration performance.

California↗
USGS2023

Science to support conservation action in a large river system: The Willamette River, Oregon, USA

Management and conservation efforts that support the recovery and protection of large rivers are daunting, reflecting the complexity of the challenge and extent of effort (in terms of policy, economic investment, and spatial extent) needed to afford measurable change. These large systems have generally experienced intensive development and regulation, compromising their capacity to respond to disturbances such as climate change or wildfire. Functionally, large river and basin management require insights gained from social, ecological, geophysical, and hydrological sciences. This multi-disciplinary perspective can unveil the integrated relationship between a river network's biotic community and seasonally variable environmental conditions that are often influenced by human activities. Large rivers and their basins are constantly changing due to anthropogenic influences and as climate modifies patterns of temperature and precipitation. Because of these factors, the state of knowledge must advance to address changing conditions. The Willamette River, in western Oregon, USA, is a prime example of a basin that has experienced significant degradation and investment in rehabilitation in recent decades. Innovative science has facilitated development of fine-scale, spatially extensive datasets and models that can generate targeted conservation and rehabilitation actions that are prioritized across the entire river network. This prioritization allows investment decisions to be driven by site-specific conditions while simultaneously considering potentials for ecological improvement. Here, we review hydrologic, geomorphic, ecologic, and social conditions in the Willamette River basin through time—including pre-settlement, river development, and contemporary periods—and offer a future vision for consideration. Currently, detailed information about fish populations and habitat, hydrologic conditions, geomorphology, water quality, and land use can be leveraged to make informed decisions about protection, rehabilitation, and development. The time is ripe for strategic management and goal development for the entire Willamette River, and these efforts can be informed by comprehensive science realized through established institutions (e.g., public agencies, non-profit watershed groups, Tribes, and universities) focused on conservation and management. The approaches to science and social-network creation that were pioneered in the Willamette River basin offer insights into the development of comprehensive conservation-based planning that could be implemented in other large river systems globally.

Oregon↗