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At least 451 records · Page 25Linked to original sources

Simple statistical models can be sufficient for testing hypotheses with population time series data

Time-series data offer wide-ranging opportunities to test hypotheses about the physical and biological factors that influence species abundances. Although sophisticated models have been developed and applied to analyze abundance time series, they require information about species detectability that is often unavailable. We propose that in many cases, simpler models are adequate for testing hypotheses. We consider three relatively simple regression models for time series, using simulated and empirical (fish and mammal) datasets. Model A is a conventional generalized linear model of abundance, model B adds a temporal autoregressive term, and model C uses an estimate of population growth rate as a response variable, with the option of including a term for density dependence. All models can be fit using Bayesian and non-Bayesian methods. Simulation results demonstrated that model C tended to have greater support for long-lived, lower-fecundity organisms (K life-history strategists), while model A, the simplest, tended to be supported for shorter-lived, high-fecundity organisms (r life-history strategists). Analysis of real-world fish and mammal datasets found that models A, B, and C each enjoyed support for at least some species, but sometimes yielded different insights. In particular, model C indicated effects of predictor variables that were not evident in analyses with models A and B. Bayesian and frequentist models yielded similar parameter estimates and performance. We conclude that relatively simple models are useful for testing hypotheses about the factors that influence abundance in time-series data, and can be appropriate choices for datasets that lack the information needed to fit more complicated models. When feasible, we advise fitting datasets with multiple models because they can provide complementary information.

Ecology and Evolution

Alternative approaches to vertebrate ecotoxicity tests in the 21st century: A review of developments over the last 2 decades and current status

The need for alternative approaches to the use of vertebrate animals for hazard assessment of chemicals and pollutants has become of increasing importance. It is now the first consideration when initiating a vertebrate ecotoxicity test, to ensure that unnecessary use of vertebrate organisms is minimized wherever possible. For some regulatory purposes, the use of vertebrate organisms for environmental risk assessments has been banned; in other situations, the number of organisms tested has been dramatically reduced or the severity of the procedure refined. However, there is still a long way to go to achieve a complete replacement of vertebrate organisms to generate environmental hazard data. The development of animal alternatives is based not just on ethical considerations but also on reducing the cost of performing vertebrate ecotoxicity tests and in some cases on providing better information aimed at improving environmental risk assessments. The present Focus article provides an overview of the considerable advances that have been made toward alternative approaches for ecotoxicity assessments over the last few decades.

Environmental Toxicology and Chemistry

Controlled induced recharge tests at Kalamazoo, Mich

This article discusses the results of a controlled field testing program, which indicated that definite hydraulic and other advantages may be gained from induced recharging as practiced at Kalamazoo, Michigan. Results include the following: water levels and artesian pressures can be maintained at high stages, the results are lower pumping lifts and substantial reductions in the amount of power used for pumping; the high water levels permit increased rates of withdrawal during periods of peak demand; encroachment of poor quality water from other aquifers is minimized; the surface water induced into the aquifer is filtered naturally through great thicknesses of earth materials; natural underground storage is used to conserve and protect water, which otherwise would flow largely to waste; and, significant supplemental benefits, including flood control, have been derived. The tests demonstrated that it is possible to manipulate the regimen of a complex hydrologic system for definite hydraulic benefits with predictable results. Furthermore with current methods, quantitative evaluations may be made of the effects of induced recharge. The results of the tests, therefore, are applicable in other areas of similar hydrogeologic environments.

Michigan

A generalized Grubbs-Beck test statistic for detecting multiple potentially influential low outliers in flood series

he Grubbs-Beck test is recommended by the federal guidelines for detection of low outliers in flood flow frequency computation in the United States. This paper presents a generalization of the Grubbs-Beck test for normal data (similar to the Rosner (1983) test; see also Spencer and McCuen (1996)) that can provide a consistent standard for identifying multiple potentially influential low flows. In cases where low outliers have been identified, they can be represented as “less-than” values, and a frequency distribution can be developed using censored-data statistical techniques, such as the Expected Moments Algorithm. This approach can improve the fit of the right-hand tail of a frequency distribution and provide protection from lack-of-fit due to unimportant but potentially influential low flows (PILFs) in a flood series, thus making the flood frequency analysis procedure more robust.

Water Resources Research

Using borehole flow logging to optimize hydraulic-test procedures in heterogeneous fractured aquifers

Hydraulic properties of heterogeneous fractured aquifers are difficult to characterize, and such characterization usually requires equipment-intensive and time-consuming applications of hydraulic testing in situ. Conventional coring and geophysical logging techniques provide useful and reliable information on the distribution of bedding planes, fractures and solution openings along boreholes, but it is often unclear how these locally permeable features are organized into larger-scale zones of hydraulic conductivity. New boreholes flow-logging equipment provides techniques designed to identify hydraulically active fractures intersecting boreholes, and to indicate how these fractures might be connected to larger-scale flow paths in the surrounding aquifer. Potential complications in interpreting flowmeter logs include: 1) Ambient hydraulic conditions that mask the detection of hydraulically active fractures; 2) Inability to maintain quasi-steady drawdowns during aquifer tests, which causes temporal variations in flow intensity to be confused with inflows during pumping; and 3) Effects of uncontrolled background variations in hydraulic head, which also complicate the interpretation of inflows during aquifer tests. Application of these techniques is illustrated by the analysis of cross-borehole flowmeter data from an array of four bedrock boreholes in granitic schist at the Mirror Lake, New Hampshire, research site. Only two days of field operations were required to unambiguously identify the few fractures or fracture zones that contribute most inflow to boreholes in the CO borehole array during pumping. Such information was critical in the interpretation of water-quality data. This information also permitted the setting of the available string of two packers in each borehole so as to return the aquifer as close to pre-drilling conditions as possible with the available equipment.

Hydrogeology Journal

Resprouting and seeding hypotheses: A test of the gap-dependent model using resprouting and obligate seeding subspecies of Arctostaphylos

Ecological factors favoring either postfire resprouting or postfire obligate seeding in plants have received considerable attention recently. Three ecological models have been proposed to explain patterns of these two life history types. In this study, we test these three models using data from California chaparral. We take an innovative approach to testing these models by not testing community or landscape patterns, but instead, investigating vegetation structure characteristic of four pairs of resprouting and (non-resprouting) obligate seeding subspecies of Arctostaphylos (Ericaceae), a dominant and diverse shrub genus in California chaparral. Data were analyzed for percentage bare ground, elevation, annual precipitation, number of fires, and time between fires and were compared independently for each subspecies pair. Results were consistently supportive of the gap-dependent model suggesting that obligate seeders are favored when post-disturbance gaps are large. Results were inconclusive or contrary to expectations for both of the other two models.

Plant Ecology

Testing assumptions for conservation of migratory shorebirds and coastal managed wetlands

Managed wetlands provide critical foraging and roosting habitats for shorebirds during migration; therefore, ensuring their availability is a priority action in shorebird conservation plans. Contemporary shorebird conservation plans rely on a number of assumptions about shorebird prey resources and migratory behavior to determine stopover habitat requirements. For example, the US Shorebird Conservation Plan for the Southeast-Caribbean region assumes that average benthic invertebrate biomass in foraging habitats is 2.4 g dry mass m −2 and that the dominant prey item of shorebirds in the region is Chironomid larvae. For effective conservation and management, it is important to test working assumptions and update predictive models that are used to estimate habitat requirements. We surveyed migratory shorebirds and sampled the benthic invertebrate community in coastal managed wetlands of South Carolina. We sampled invertebrates at three points in time representing early, middle, and late stages of spring migration, and concurrently surveyed shorebird stopover populations at approximately 7-day intervals throughout migration. We used analysis of variance by ranks to test for temporal variation in invertebrate biomass and density, and we used a model based approach (linear mixed model and Monte Carlo simulation) to estimate mean biomass and density. There was little evidence of a temporal variation in biomass or density during the course of spring shorebird migration, suggesting that shorebirds did not deplete invertebrate prey resources at our site. Estimated biomass was 1.47 g dry mass m −2 (95 % credible interval 0.13–3.55), approximately 39 % lower than values used in the regional shorebird conservation plan. An additional 4728 ha (a 63 % increase) would be required if habitat objectives were derived from biomass levels observed in our study. Polychaetes, especially Laeonereis culveri (2569 individuals m −2 ), were the most abundant prey in foraging habitats at our site. Polychaetes have lower caloric content than levels assumed in the regional plan; when lower caloric content and lower biomass levels are used to determine habitat objectives, an additional 6395 ha would be required (86 % increase). Shorebird conservation and management plans would benefit from considering the uncertainty in parameters used to derive habitat objectives, especially biomass and caloric content of prey resources. Iterative testing of models that are specific to the planning region will provide rapid advances for management and conservation of migratory shorebirds and coastal managed wetlands.

Wetlands Ecology and Management

Pumping tests in non-uniform aquifers - The linear strip case

Many pumping tests are performed in geologic settings that can be conceptualized as a linear infinite strip of one material embedded in a matrix of differing flow properties. A semi-analytical solution is presented to aid the analysis of drawdown data obtained from pumping tests performed in settings that can be represented by such a conceptual model. Integral transform techniques are employed to obtain a solution in transform space that can be numerically inverted to real space. Examination of the numerically transformed solution reveals several interesting features of flow in this configuration. If the transmissivity of the strip is much higher than that of the matrix, linear and bilinear flow are the primary flow regimes during a pumping test. If the contrast between matrix and strip properties is not as extreme, then radial flow should be the primary flow mechanism. Sensitivity analysis is employed to develop insight into the controls on drawdown in this conceptual model and to demonstrate the importance of temporal and spatial placement of observations. Changes in drawdown are sensitive to the transmissivity of the strip for a limited time duration. After that time, only the total drawdown remains a function of strip transmissivity. In the case of storativity, both the total drawdown and changes in drawdown are sensitive to the storativity of the strip for a time of quite limited duration. After that time, essentially no information can be gained about the storage properties of the strip from drawdown data. An example analysis is performed using data previously presented in the literature to demonstrate the viability of the semi-analytical solution and to illustrate a general procedure for analysis of drawdown data in complex geologic settings. This example reinforces the importance of observation well placement and the time of data collection in constraining parameter correlation, a major source of the uncertainty that arises in the parameter estimation procedure.

Journal of Hydrology

A method for testing whether model predictions fall within a prescribed factor of true values, with an application to pesticide leaching

A quantitative method is described for testing whether model predictions fall within a specified factor of true values. The technique is based on classical theory for confidence regions on unknown population parameters and can be related to hypothesis testing in both univariate and multivariate situations. A capability index is defined that can be used as a measure of predictive capability of a model, and its properties are discussed. The testing approach and the capability index should facilitate model validation efforts and permit comparisons among competing models. An example is given for a pesticide leaching model that predicts chemical concentrations in the soil profile.

Ecological Modelling

Testing the potential role of brine reflux in the formation of sedimentary exhalative (Sedex) ore deposits

Sedimentary exhalative (sedex) ore deposits are the world’s largest Zn-Pb deposits. While the geologic processes that formed these deposits are generally well understood, the fundamental hydrologic processes that drove these massive hydrothermal systems remain an area of debate. We use numerical modeling to test an emerging hypothesis, supported by recent ore genesis research and sedex basin analysis, that brine reflux flow systems produced and drove the fluids that formed sedex deposits. A previous numerical model of brine reflux, developed to study dolomitization, is adapted to a sedimentary basin with geologic features essential for sedex formation. We simulate the flow of evaporated brines through the basin and the evolution of salinity, temperature, and flow rates, and find that modeled values for these parameters for brines discharging to the seafloor exceed previously established physiochemical thresholds for ore formation (>170 g/L, >80°C, and total discharge volumes >107 m3 per meter perpendicular to the 2D model section). Sensitivity testing of this modest-sized basin highlights the large effect that aspects of the hydrogeologic framework can have on mineralizing potential of the reflux brines. Finally, modeling alternating periods of active and inactive evaporation produces pulsed brine reflux systems capable of producing multiple deposits of different age as observed in many sedex basins. The modeling thus supports the hypothesis that seawater evaporation on the basin margin significantly inboard of sedex deposits may be responsible for their formation. Sensitivity testing suggests that numerical models with more detailed, basin-specific geologic frameworks might be useful for assessing the mineral potential of sedimentary basins.

Ore Geology Reviews

Evaluating planetary digital terrain models-The HRSC DTM test

The High Resolution Stereo Camera (HRSC) has been orbiting the planet Mars since January 2004 onboard the European Space Agency (ESA) Mars Express mission and delivers imagery which is being used for topographic mapping of the planet. The HRSC team has conducted a systematic inter-comparison of different alternatives for the production of high resolution digital terrain models (DTMs) from the multi look HRSC push broom imagery. Based on carefully chosen test sites the test participants have produced DTMs which have been subsequently analysed in a quantitative and a qualitative manner. This paper reports on the results obtained in this test.

Planetary and Space Science

Field test comparison of an autocorrelation technique for determining grain size using a digital 'beachball' camera versus traditional methods

This extensive field test of an autocorrelation technique for determining grain size from digital images was conducted using a digital bed-sediment camera, or 'beachball' camera. Using 205 sediment samples and >1200 images from a variety of beaches on the west coast of the US, grain size ranging from sand to granules was measured from field samples using both the autocorrelation technique developed by Rubin [Rubin, D.M., 2004. A simple autocorrelation algorithm for determining grain size from digital images of sediment. Journal of Sedimentary Research, 74(1): 160-165.] and traditional methods (i.e. settling tube analysis, sieving, and point counts). To test the accuracy of the digital-image grain size algorithm, we compared results with manual point counts of an extensive image data set in the Santa Barbara littoral cell. Grain sizes calculated using the autocorrelation algorithm were highly correlated with the point counts of the same images (r2 = 0.93; n = 79) and had an error of only 1%. Comparisons of calculated grain sizes and grain sizes measured from grab samples demonstrated that the autocorrelation technique works well on high-energy dissipative beaches with well-sorted sediment such as in the Pacific Northwest (r2 ??? 0.92; n = 115). On less dissipative, more poorly sorted beaches such as Ocean Beach in San Francisco, results were not as good (r2 ??? 0.70; n = 67; within 3% accuracy). Because the algorithm works well compared with point counts of the same image, the poorer correlation with grab samples must be a result of actual spatial and vertical variability of sediment in the field; closer agreement between grain size in the images and grain size of grab samples can be achieved by increasing the sampling volume of the images (taking more images, distributed over a volume comparable to that of a grab sample). In all field tests the autocorrelation method was able to predict the mean and median grain size with ???96% accuracy, which is more than adequate for the majority of sedimentological applications, especially considering that the autocorrelation technique is estimated to be at least 100 times faster than traditional methods.

Sedimentary Geology

Using flowmeter pulse tests to define hydraulic connections in the subsurface: A fractured shale example

Cross-borehole flowmeter pulse tests define subsurface connections between discrete fractures using short stress periods to monitor the propagation of the pulse through the flow system. This technique is an improvement over other cross-borehole techniques because measurements can be made in open boreholes without packers or previous identification of water-producing intervals. The method is based on the concept of monitoring the propagation of pulses rather than steady flow through the fracture network. In this method, a hydraulic stress is applied to a borehole connected to a single, permeable fracture, and the distribution of flow induced by that stress monitored in adjacent boreholes. The transient flow responses are compared to type curves computed for several different types of fracture connections. The shape of the transient flow response indicates the type of fracture connection, and the fit of the data to the type curve yields an estimate of its transmissivity and storage coefficient. The flowmeter pulse test technique was applied in fractured shale at a volatile-organic contaminant plume in Watervliet, New York. Flowmeter and other geophysical logs were used to identify permeable fractures in eight boreholes in and near the contaminant plume using single-borehole flow measurements. Flowmeter cross-hole pulse tests were used to identify connections between fractures detected in the boreholes. The results indicated a permeable fracture network connecting many of the individual boreholes, and demonstrated the presence of an ambient upward hydraulic-head gradient throughout the site.

Journal of Hydrology

An approach for assessment of water quality using semipermeable membrane devices (SPMDs) and bioindicator tests

As an integral part of our continued development of water quality assessment approaches, we combined integrative sampling, instrumental analysis of widely occurring anthropogenic contaminants, and the application of a suite of bioindicator tests as a specific part of a broader survey of ecological conditions, species diversity, and habitat quality in the Santa Cruz River in Arizona, USA. Lipid-containing semipermeable membrane devices (SPMDs) were employed to sequester waterborne hydrophobic chemicals. Instrumental analysis and a suite of bioindicator tests were used to determine the presence and potential toxicological relevance of mixtures of bioavailable chemicals in two major water sources of the Santa Cruz River. The SPMDs were deployed at two sites; the effluent weir of the International Wastewater Treatment Plant (IWWTP) and the Nogales Wash. Both of these systems empty into the Santa Cruz River and the IWWTP effluent is a potential source of water for a constructed wetland complex. Analysis of the SPMD sample extracts revealed the presence of organochlorine pesticides (OCs), polychlorinated biphenyls (PCBs), and polycyclic aromatic hydrocarbons (PAHs). The bioindicator tests demonstrated increased liver enzyme activity, perturbation of neurotransmitter systems and potential endocrine disrupting effects (vitellogenin induction) in fish exposed to the extracts. With increasing global demands on limited water resources, the approach described herein provides an assessment paradigm applicable to determining the quality of water in a broad range of aquatic systems.

Chemosphere

Strength, stiffness, and Poisson’s ratio measurements for cements used in the well completions for the extended-duration gas production test on the Alaskan North Slope

As part of an extended-duration production test from a natural gas hydrate reservoir on the Alaska North Slope, a suite of optical-fiber sensors was encased in the completion cement to provide stable downhole monitoring around each of the four project wells. How the sensors respond to changes in the reservoir over time depends in part on properties of the LiteCRETE, ArcticCem, or Tuned Light cement in which each sensor is encased, and on how well the cement bonded to the well casing, sensors, and sediment formation. Here, we report on physical properties of the cements (compressive and tensile strength, stiffness, and Poisson’s ratio), on the downhole distribution of the cements used in each well, and on the cement bond quality. Physical property measurements are presented for cements sampled during the completion activities for the three wells completed in 2022–2023. Samples were cured while being submerged in water at 2–4 °C, then tested at intervals from ∼30 days to more than one year. After an initial period of rapid increase, cement strengths largely stabilized around 120 days in all cases, meaning that cements in all wells reached their nominal strength plateau four months or more before the production test began. Calculations based on recorded volumes of pumped cement show the subpermafrost, main hole portion of each well is encased only in the higher-density “tail” cement used in that well. Downhole cement evaluation logs from two wells demonstrate how the presence of sensors and other hardware outside the casing interferes with the cement evaluation assessment. Nonetheless, the cement evaluations indicate a generally good bond with the formation and sensors over the gas hydrate reservoir intervals.

Alaska

Multispecies reactive tracer test in an aquifer with spatially variable chemical conditions

A field investigation of multispecies reactive transport was conducted in a well‐characterized, sand and gravel aquifer on Cape Cod, Massachusetts. The aquifer is characterized by regions of differing chemical conditions caused by the disposal of secondary sewage effluent. Ten thousand liters of groundwater with added tracers (Br, Cr(VI), and EDTA complexed with Pb, Zn, Cu, and Ni) were injected into the aquifer and distributions of the tracers were monitored for 15 months. Most of the tracers were transported more than 200 m; transport was quantified using spatial moments computed from the results of a series of synoptic samplings. Cr(VI) transport was retarded relative to Br; the retardation factor varied from 1.1 to 2.4 and was dependent on chemical conditions. At 314 days after the injection, dissolved Cr(VI) mass in the tracer cloud had decreased 85%, with the likely cause being reduction to Cr(III) in a suboxic region of the aquifer. Transport of the metal‐EDTA complexes was affected by aqueous complexation, adsorption, and dissolution‐precipitation reactions of Fe oxyhydroxide minerals in the aquifer sediments. Dissolved Pb‐EDTA complexes disappeared from the tracer cloud within 85 days, probably due to metal exchange reactions with Fe and adsorbed Zn (present prior to the injection from contamination by the sewage effluent). About 30% of the Cu‐EDTA complexes remained within the tracer cloud 314 days after injection, even though the thermodynamic stability of the Pb‐EDTA complex is greater than Cu‐EDTA. It is hypothesized that stronger adsorption of Pb 2+ to the aquifer sediments causes the Pb‐EDTA complex to disassociate to a greater degree than the Cu‐EDTA complex. The mass of dissolved Zn‐EDTA increased during the first 175 days of the tracer test to 140% of the mass injected, with the increase due to desorption of sewage‐derived Zn. Dissolved Ni‐EDTA mass remained nearly constant throughout the tracer test, apparently only participating in reversible adsorption reactions. The results of the field experiment provide a chemically complex data set that can be used in the testing of reactive transport models of flow coupled with chemical reactions.

Water Resources Research

Remotely sensed geology from lander-based to orbital perspectives: Results of FIDO rover May 2000 field tests

Blind field tests of the Field Integration Design and Operations (FIDO) prototype Mars rover were carried out 7-16 May 2000. A Core Operations Team (COT), sequestered at the Jet Propulsion Laboratory without knowledge of test site location, prepared command sequences and interpreted data acquired by the rover. Instrument sensors included a stereo panoramic camera, navigational and hazard-avoidance cameras, a color microscopic imager, an infrared point spectrometer, and a rock coring drill. The COT designed command sequences, which were relayed by satellite uplink to the rover, and evaluated instrument data. Using aerial photos and Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) data, and information from the rover sensors, the COT inferred the geology of the landing site during the 18 sol mission, including lithologic diversity, stratigraphic relationships, environments of deposition, and weathering characteristics. Prominent lithologic units were interpreted to be dolomite-bearing rocks, kaolinite-bearing altered felsic volcanic materials, and basalt. The color panoramic camera revealed sedimentary layering and rock textures, and geologic relationships seen in rock exposures. The infrared point spectrometer permitted identification of prominent carbonate and kaolinite spectral features and permitted correlations to outcrops that could not be reached by the rover. The color microscopic imager revealed fine-scale rock textures, soil components, and results of coring experiments. Test results show that close-up interrogation of rocks is essential to investigations of geologic environments and that observations must include scales ranging from individual boulders and outcrops (microscopic, macroscopic) to orbital remote sensing, with sufficient intermediate steps (descent images) to connect in situ and remote observations.

Journal of Geophysical Research E: Planets

Steady shape analysis of tomographic pumping tests for characterization of aquifer heterogeneities

Hydraulic tomography, a procedure involving the performance of a suite of pumping tests in a tomographic format, provides information about variations in hydraulic conductivity at a level of detail not obtainable with traditional well tests. However, analysis of transient data from such a suite of pumping tests represents a substantial computational burden. Although steady state responses can be analyzed to reduce this computational burden significantly, the time required to reach steady state will often be too long for practical applications of the tomography concept. In addition, uncertainty regarding the mechanisms driving the system to steady state can propagate to adversely impact the resulting hydraulic conductivity estimates. These disadvantages of a steady state analysis can be overcome by exploiting the simplifications possible under the steady shape flow regime. At steady shape conditions, drawdown varies with time but the hydraulic gradient does not. Thus transient data can be analyzed with the computational efficiency of a steady state model. In this study, we demonstrate the value of the steady shape concept for inversion of hydraulic tomography data and investigate its robustness with respect to improperly specified boundary conditions.

Water Resources Research