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At least 433 records · Page 24Linked to original sources

Understanding pesticides in California's Delta

The Sacramento-San Joaquin River Delta (Delta) is the hub of California’s water system and also an important habitat for imperiled fish and wildlife. Aquatic organisms are exposed to mixtures of pesticides that flow through the maze of Delta water channels from sources including agricultural, landscape, and urban pest-control applications. While we do not know all of the effects pesticides have on the ecosystem, there is evidence that they cause some damage to organisms in the Delta. Decades of USGS research have provided a good understanding of when, where, and how pesticides enter the Delta. However, pesticide use is continually changing. New field studies and methods are needed so that scientists can analyze which pesticides are present in the Delta, and at what concentrations, enabling them to estimate exposure and ultimate effects on organisms. Continuing research will provide resource managers and stakeholders with crucial information to manage the Delta wisely.

California↗

Evaluation of ground-water flow and solute transport in the Lompoc area, Santa Barbara County, California

Ground-water quality in the Lompoc area, especially in the Lompoc plain, is only marginally acceptable for most uses. Demand for ground water has increased for municipal use since the late 1950's and has continued to be high for irrigation on the Lompoc plain, the principal agricultural area in the Santa Ynez River basin. As use has increased, the quality of ground water has deteriorated in some areas of the Lompoc plain. The dissolved-solids concentration in the main zone of the upper aquifer beneath most of the central and western plains has increased from less than 1,000 milligrams per liter in the 1940's to greater than 2,000 milligrams per liter in the 1960's. Dissolved- solids concentration have remained relatively constant since the 1960's. A three-dimensional finite-difference model was used to simulate ground-water flow in the Lompoc area and a two-dimensional finite-element model was used to simulate solute transport to gain a better understanding of the ground-water system and to evaluate the effects of proposed management plans for the ground-water basin. The aquifer system was simulated in the flow model as four horizontal layers. In the area of the Lompoc plain, the layers represent the shallow, middle, and main zones of the upper aquifer, and the lower aquifer. For the Lompoc upland and Lompoc terrace, the four layers represent the lower aquifer. The solute transport model was used to simulate dissolved-solids transport in the main zone of the upper aquifer beneath the Lompoc plain. The flow and solute-transport models were calibrated to transient conditions for 1941-88. A steady-state simulation was made to provide initial conditions for the transient-state simulation by using long-term average (1941-88) recharge rates. Model- simulated hydraulic heads generally were within 5 feet of measured heads in the main zone for transient conditions. Model-simulated dissolved- solids concentrations for the main zone generally differed less than 200milligrams per liter from concentrations in 1988. During 1941-88 about 1,096,000 acre-feet of water was pumped from the aquifer system. Average pumpage for this period (22,830 acre-feet per year) exceeded pumpage for the steady-state simulation by 16,590 acre-feet per year. The results of the transient simulation indicate that about 60 percent of this increase in pumpage was contributed by increased recharge, 28 percent by decreased natural discharge from the system (primarily discharge to the Santa Ynez River and transpiration), and 13 percent was withdrawn from storage. Total simulated downward leakage from the middle zone to the main zone in the central plain and upward leakage from the consolidated rocks to the main zone significantly increased in response to increased pumpage, which increased from about 6,240 to 30,870 acre-feet per year from 1941 to 1988. Average dissolved-solid concentration in the middle zone in 1987-88 ranged from 2,000 to 3,000 milligrams per liter beneath the northeastern plain and the dissolved-solids concentration of two samples from the consolidated rocks beneath the western plain averaged 4,300 milligrams per liter. Because the dissolved-solids concentration for the middle zone and the consolidated rocks is higher than the simulated steady-state dissolved-solids concentration of the main zone, the increase in the leakage from these two sources resulted in increased dissolved-solids concentration in the main zone during the transient period. The model results indicate that the main source of increased dissolved- solids concentration in the northeastern and central plains was downward leakage from the middle zone; whereas, upward leakage from the consolidated rocks was the main source of the increased dissolved-solids concentrations in the northwestern and western plains. The models were used to estimate changes in hydraulic head and in dissolved-solids concentration resulting from three proposed management alternatives: (1) average recharge

Water-Resources Investigations Report↗

Groundwater quality in Coachella Valley, California

Groundwater provides more than 40 percent of California’s drinking water. To protect this vital resource, the State of California created the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The Priority Basin Project of the GAMA Program provides a comprehensive assessment of the State’s groundwater quality and increases public access to groundwater-quality information. Coachella Valley is one of the study areas being evaluated. The Coachella study area is approximately 820 square miles (2,124 square kilometers) and includes the Coachella Valley groundwater basin (California Department of Water Resources, 2003). Coachella Valley has an arid climate, with average annual rainfall of about 6 inches (15 centimeters). The runoff from the surrounding mountains drains to rivers that flow east and south out of the study area to the Salton Sea. Land use in the study area is approximately 67 percent (%) natural, 21% agricultural, and 12% urban. The primary natural land cover is shrubland. The largest urban areas are the cities of Indio and Palm Springs (2010 populations of 76,000 and 44,000, respectively). Groundwater in this basin is used for public and domestic water supply and for irrigation. The main water-bearing units are gravel, sand, silt, and clay derived from surrounding mountains. The primary aquifers in Coachella Valley are defined as those parts of the aquifers corresponding to the perforated intervals of wells listed in the California Department of Public Health database. Public-supply wells in Coachella Valley are completed to depths between 490 and 900 feet (149 to 274 meters), consist of solid casing from the land surface to a depth of 260 to 510 feet (79 to 155 meters), and are screened or perforated below the solid casing. Recharge to the groundwater system is primarily runoff from the surrounding mountains, and by direct infiltration of irrigation. The primary sources of discharge are pumping wells, evapotranspiration, and underflow to the Salton Sea and Imperial Valley areas.

California↗

GOES-derived fog and low cloud indices for coastal north and central California ecological analyses

Fog and low cloud cover (FLCC) changes the water, energy, and nutrient flux of coastal ecosystems. Easy-to-use FLCC data are needed to quantify the impacts of FLC on ecosystem dynamics during hot, dry Mediterranean climate summers. FLCC indices were generated from 26,000 hourly night and day FLCC maps derived from Geostationary Environmental Operational Satellite (GOES) data for June, July, August, and September, 1999- 2009 for coastal California, latitude 34.50&deg;N, south of Monterey Bay, to latitude 41.95&deg;N, north of Crescent City. Monthly FLCC average hours per day (h/d) range from < 2 to 18. Average FLCC over the ocean increases from north (9 h/d) to south (14 h/d) whereas FLCC over land is reversed. Over land, FLCC is highest where land juts into the prevailing NW winds and is lowest in the lee of major capes. FLCC advects furthest inland through low-lying NW ocean-facing valleys. At night hours of FLCC is higher more frequently on land than over the ocean. Interannual FLCC coefficient of variation shows long term geographic stability strongly associated with landform position. Contours delineating homogeneous zones of FLCC, derived from average decadal h/d FLCC, provide data to refine the commonly used term &lsquo;fog belt.&rsquo; FLCC indices are available for download from the California Landscape Conservation Cooperative Climate Commons website. FLCC indices can be used to improve analyses of biogeographic and bioclimatic species distribution models, meteorological mechanisms driving FLCC patterns, ecohydrological investigations of evapotranspiration, solar energy feasibility studies, agricultural irrigation demand and viticultural ripening models.

Earth and Space Science↗

Abundance and sexual size dimorphism of the giant gartersnake (Thamnophis gigas) in the Sacramento valley of California

The Giant Gartersnake (Thamnophis gigas) is restricted to wetlands of the Central Valley of California. Because of wetland loss in this region, the Giant Gartersnake is both federally and state listed as threatened. We conducted markrecapture studies of four populations of the Giant Gartersnake in the Sacramento Valley (northern Central Valley), California, to obtain baseline data on abundance and density to assist in recovery planning for this species. We sampled habitats that ranged from natural, unmanaged marsh to constructed managed marshes and habitats associated with rice agriculture. Giant Gartersnake density in a natural wetland (1.90 individuals/ha) was an order of magnitude greater than in a managed wetland subject to active season drying (0.17 individuals/ha). Sex ratios at all sites were not different from 1 1, and females were longer and heavier than males. Females had greater body condition than males, and individuals at the least disturbed sites had significantly greater body condition than individuals at the managed wetland. The few remaining natural wetlands in the Central Valley are important, productive habitat for the Giant Gartersnake, and should be conserved and protected. Wetlands constructed and restored for the Giant Gartersnake should be modeled after the permanent, shallow wetlands representative of historic Giant Gartersnake habitat. ?? 2010 Society for the Study of Amphibians and Reptiles.

Journal of Herpetology↗

Chemical quality of ground water in the Tehama-Colusa Canal service area, Sacramento Valley, California

The Tehama-Colusa Canal Service Area consists of about 450 square miles of irrigable land located on the west side of the Sacramento Valley, Calif. Upon the completion of the Tehama-Colusa Canal, it is expected that most of the service area will switch from passive forms of agriculture (dry farming and grazing) to intensive irrigated farming. Importation and application of surface water may affect the chemical quality of native ground water. This study documents the chemical quality of native ground water before large-scale importation and application of surface water provide the potential of altering the ground-water chemistry. Analyses of samples from 222 wells show that most of the area is underlain by ground water of a quality suitable for most agricultural and domestic uses. In the vicinities of College City-Arbuckle and the city of Williams, boron, chloride, sodium, and dissolved solids may be a threat to future agricultural activities where boron- or chloride-sensitive crops would be grown. The source of degraded ground water in the two areas is local intermittent streams that drain areas having numerous saline springs and seeps. (Woodard-USGS)

California↗

Age Determination of the Remaining Peat in the Sacramento-San Joaquin Delta, California, USA

Introduction The Sacramento-San Joaquin Delta of California was once a 1,400 square kilometer (km2) tidal marsh, which contained a vast layer of peat ranging up to 15 meters (m) thick (Atwater and Belknap, 1980). Because of its favorable climate and highly fertile peat soils, the majority of the Delta was drained and reclaimed for agriculture during the late 1800s and early 1900s. Drainage of the peat soils changed the conditions in the surface layers of peat from anaerobic (having no free oxygen present) to aerobic (exposed to the atmosphere). This change in conditions greatly increased the decomposition rate of the peat, which consists largely of organic (plant) matter. Thus began the process of land-surface subsidence, which initially was a result of peat shrinkage and compaction, and later largely was a result of oxidation by which organic carbon in the peat essentially vaporized to carbon dioxide (Deverel and others, 1998; Ingebritsen and Ikehara, 1999). Because of subsidence, the land-surface elevation on farmed islands in the Delta has decreased from a few meters to as much as 8 m below local mean sea level (California Department of Water Resources, 1995; Steve Deverel, Hydrofocus, Inc., written commun., 2007). The USGS, in collaboration with the University of California at Davis, and Hydrofocus Inc. of Davis, California, has been studying the formation of the Delta and the impact of wetland reclamation on the peat column as part of a project called Rates and Evolution of Peat Accretion through Time (REPEAT). The purpose of this report is to provide results on the age of the remaining peat soils on four farmed islands in the Delta.

Open-File Report↗

DRIFteRS: A dataset of drift invertebrate densities in streams and rivers across western North America, 1997–2024

Prey availability is among the most influential and highly variable determinants of fish growth and freshwater habitat carrying capacity, yet it remains understudied compared to physical habitat variables (Ouellet et al., 2025; Rosenfeld et al., 2014; Weber et al., 2017). We often lack a clear understanding of how much food is available to fishes, how it varies spatially and temporally, and how it influences responses to restoration (Ouellet et al., 2025; Rossi et al., 2024; Wipfli et al., 2010). Drift invertebrates—the primary food source for juvenile salmonids and other drift-foraging fishes—play a pivotal role in these dynamics. To better understand the spatiotemporal variability of drift invertebrate abundance and biomass across the freshwater range of drift-feeding salmonids in western North America, we compiled the DRift Invertebrates For salmonids in River Systems (DRIFteRS) dataset. The dataset encompasses 6125 samples of drift invertebrates, and, for a subset of drift samples, associated benthic invertebrate density data, collected from 1360 reaches on 459 unique rivers and streams spanning 55 river basins considered hydrologically independent (i.e., not nested within the same larger watershed) across British Columbia, Canada, and the U.S. states of Alaska, Arizona, California, Colorado, Idaho, Nevada, New Mexico, Oregon, Utah, Washington, and Wyoming. Sample sites represent a diverse array of river and stream habitats (e.g., headwater, mainstem, side channel), in watersheds with diverse land uses (e.g., urban, wilderness, agricultural), and disturbance histories (e.g., fire, restoration). Collected between 1997 and 2024, the data span the full calendar year and capture daily and seasonal patterns in drift abundance and biomass densities. When paired with water quality and quantity data as well as remotely sensed environmental landscape data, such as land use/land cover, climate, and disturbance history, channel morphology, and riparian vegetation composition, the DRIFteRS dataset can aid in identifying key drivers of drift invertebrate densities and mean body size and support predictive modeling in unsampled locations and times. The dataset may also be used to analyze aquatic-terrestrial resource flows, derive prey-encounter rates and profitability (mean prey size), and inform broader investigations of sit-and-wait foraging ecology, especially when paired with data on drift-foraging predators. For salmonid-focused applications, the dataset can be integrated into habitat evaluation models, including bioenergetic (e.g., Naman et al., 2019) and life cycle models (e.g., Beechie et al., 2023), to improve estimates of habitat capacity and population dynamics for river- and stream-rearing salmonids. Understanding prey availability dynamics is increasingly important, because rising water temperatures increase salmonid metabolic demands (Crozier et al., 2010). Flow regime transitions (i.e., snow or glacier dominated to rain dominated; Beechie et al., 2013), wildfire frequency and intensity (Hessburg et al., 2021), as well as plant community and phenology shifts (Cleland et al., 2007; Franklin et al., 2016) are all predicted to change with rising temperatures and are potential drivers of terrestrial and aquatic invertebrate prey quality and availability in lotic systems. These insights can ultimately inform restoration prioritization and design, helping managers consider food resource implications when evaluating restoration priorities and match habitat improvement to food supply. The data are released under the Creative Commons Attribution 4.0 International license and may be reused with attribution.

Alaska, Arizona, British Columbia, California, Col↗

Land subsidence caused by the East Mesa geothermal field, California, observed using SAR interferometry

Interferometric combination of pairs of synthetic aperture radar (SAR) images acquired by the ERS-1 satellite maps the deformation field associated with the activity of the East Mesa geothermal plant, located in southern California. SAR interferometry is applied to this flat area without the need of a digital terrain model. Several combinations are used to ascertain the nature of the phenomenon. Short term interferograms reveal surface phase changes on agricultural fields similar to what had been observed previously with SEASAT radar data. Long term (2 years) interferograms allow the study of land subsidence and improve prior knowledge of the displacement field, and agree with existing, sparse levelling data. This example illustrates the power of the interferometric technique for deriving accurate industrial intelligence as well as its potential for legal action, in cases involving environmental damages.

Geophysical Research Letters↗

Quality of groundwater used for domestic supply in the Modesto, Turlock, and Merced Subbasins of the San Joaquin Valley, California

Summary More than 2 million Californians rely on groundwater from privately owned domestic wells for drinking-water supply. This report summarizes a water-quality survey of domestic and small-system drinking-water supply wells in the Modesto, Turlock, and Merced subbasins of the San Joaquin Valley where more than 78,000 residents are estimated to use privately owned domestic wells. Results indicate that inorganic and organic constituents in groundwater were respectively present above regulatory (maximum contaminant level, MCL) benchmarks for public drinking-water quality in 37 percent and 9 percent of the aquifer area used for domestic drinking-water supplies (herein, “domestic groundwater resources”). The most prevalent inorganic constituents exceeding regulatory benchmarks were nitrate, uranium, and arsenic. The only organic constituents exceeding regulatory benchmarks were the fumigant constituents 1,2,3-trichloropropane (1,2,3-TCP) and 1,2-dibromo-3-chloropropane (DBCP), but the herbicides atrazine and simazine were detected at low concentrations below one-tenth of regulatory benchmarks in 30 percent of domestic groundwater resources. Total dissolved solids (TDS) and manganese exceeded aesthetic-based (secondary maximum contaminant level [SMCL]) benchmarks for drinking water in 3 percent and 13 percent of domestic groundwater resources, respectively. Per- and polyfluoroalkyl substances (PFAS) were detected in 23 percent of domestic groundwater resources, with 4 percent exceeding California state notification or response levels for specific compounds. Total coliform bacteria were detected in 20 percent of domestic groundwater resources. Elevated concentrations of nitrate, uranium, TDS, and pesticides (fumigant constituents and herbicides) are related to agricultural land use and were typically present at shallow depths up to 75 meters below land surface. Agriculturally derived constituents were detected in wells screened below the Corcoran Clay Member of the Tulare Formation (herein, “Corcoran Clay”) in the southeastern part of the study area, where the Corcoran Clay tends to be shallower and thinner than in areas to the northwest. Nitrate, uranium, and TDS were most prevalent in the northwest part of the study area proximal to the valley trough where soils are poorly drained and agricultural land uses are predominantly grain, alfalfa, and dairy farms. Pesticides tended to occur in groundwater below coarse-grained surficial deposits and within a northwest to southeast trending band along the eastern extent of the Corcoran Clay that typically demarcates the western extent of well-drained soils associated with perennial orchard crops. Elevated concentrations of arsenic tended to occur west of this band in reducing groundwater but also sometimes co-occurred with elevated nitrate in oxic groundwater, most likely because of geochemical conditions in agriculturally affected groundwater that can enhance the mobility of arsenic from aquifer sediments.

California↗

Conceptual understanding and groundwater quality of selected basin-fill aquifers in the Southwestern United States

The National Water-Quality Assessment (NAWQA) Program of the U.S. Geological Survey has been conducting a regional analysis of water quality in the principal aquifer systems in the southwestern United States (hereinafter, “Southwest”) since 2005. Part of the NAWQA Program, the objective of the Southwest Principal Aquifers (SWPA) study is to develop a better understanding of water quality in basin-fill aquifers in the region by synthesizing information from case studies of 15 basins into a common set of important natural and human-related factors found to affect groundwater quality. The synthesis consists of three major components: 1. Summary of current knowledge about the groundwater systems, and the status of, changes in, and influential factors affecting quality of groundwater in basin-fill aquifers in 15 basins previously studied by NAWQA (this report). 2. Development of a conceptual model of the primary natural and human-related factors commonly affecting groundwater quality, thereby building a regional understanding of the susceptibility and vulnerability of basin-fill aquifers to contaminants. 3. Development of statistical models that relate the concentration or occurrence of specific chemical constituents in groundwater to natural and human-related factors linked to the susceptibility and vulnerability of basin-fill aquifers to contamination. Basin-fill aquifers occur in about 200,000 mi 2 of the 410,000 mi 2 SWPA study area and are the primary source of groundwater supply for cities and agricultural communities. Four of the principal aquifers or aquifer systems of the United States are included in the basin-fill aquifers of the study area: (1) the Basin and Range basin-fill aquifers in California, Nevada, Utah, and Arizona; (2) the Rio Grande aquifer system in New Mexico and Colorado; (3) the California Coastal Basin aquifers; and (4) the Central Valley aquifer system in California. Because of the generally limited availability of surface-water supplies in the arid to semiarid climate, cultural and economic activities in the Southwest are particularly dependent on supplies of good-quality groundwater. Irrigation and public-supply withdrawals from basin-fill aquifers in the study area account for about one quarter of the total withdrawals from all aquifers in the United States. Many factors influence the quality of groundwater in the 15 case-study basins, but some common factors emerge from the basin summaries presented in this report. These factors include the chemical composition of the recharge water, consolidated rock geology and composition of aquifer materials derived from consolidated rock, and land and water use. The major water-quality issues in many of the developed case-study basins are increased concentrations of dissolved solids, nitrate, and VOCs in groundwater as a result of human activities. The information presented and the citations listed in this report serve as a resource for those interested in the groundwater-flow systems in the NAWQA case-study basins. The summaries of water-development history, hydrogeology, conceptual understanding of the groundwater system under both predevelopment and modern conditions, and effects of natural and human-related factors on groundwater quality presented in the sections on each basin also serve as a foundation for the synthesis and modeling phases of the SWPA regional study.

Arizona, California, Colorado, Nevada, New Mexico,↗

Fine-scale surficial soil moisture mapping using UAS-based L-band remote sensing in a mixed oak-grassland landscape

Soil moisture maps provide quantitative information that, along with climate and energy balance, is critical to integrate with hydrologic processes for characterizing landscape conditions. However, soil moisture maps are difficult to produce for natural landscapes because of vegetation cover and complex topography. Satellite-based L-band microwave sensors are commonly used to develop spatial soil moisture data products, but most existing L-band satellites provide only coarse scale (one to tens of kilometers grid size), information that is unsuitable for measuring soil moisture variation at hillslope or watershed-scales. L-band sensors are typically deployed on satellite platforms and aircraft but have been too large to deploy on small uncrewed aircraft systems (UAS). There is a need for greater spatial resolution and development of effective measures of soil moisture across a variety of natural vegetation types. To address these challenges, a novel UAS-based L-band radiometer system was evaluated that has recently been tested in agricultural settings. In this study, L-band UAS was used to map soil moisture at 3–50-m (m) resolution in a 13 square kilometer (km 2 ) mixed grassland-forested landscape in Sonoma County, California. The results represent the first application of this technology in a natural landscape with complex topography and vegetation. The L-band inversion of the radiative transfer model produced soil moisture maps with an average unbiased root mean squared error (ubRMSE) of 0.07 m 3 /m 3 and a bias of 0.02 m 3 /m 3 . Improved fine-scale soil moisture maps developed using UAS-based systems may be used to help inform wildfire risk, improve hydrologic models, streamflow forecasting, and early detection of landslides.

California↗

Report of Committee on Glaciers, 1942–43

The personnel of the Committee at present is as follows: Harry Fielding Reid, Professor Emeritus of Geology, Johns Hopkins University, 608 Cathedral Street, Baltimore, Maryland William H. Hobbs, Professor Emeritus of Geology, University of Michigan, Ann Arbor, Michigan Colonel Lawrence Martin, Chief, Division of Maps, Library of Congress, Washington, D.C. James E. Church, Professor of Meteorology and President, International Commission of Snow and Glaciers, Agricultural Experiment Station, University of Nevada, Reno, Nevada First Lieutenant William Osgood Field, Jr., home address, 18 West Twelfth Street, New York City Oliver Kehrlein, Chairman, Committee on Glacier Studies, Sierra Club, 1050 Mills Tower, San Francisco, California Kenneth N. Phillips, Associate Hydraulic Engineer, Water Resources Branch, Geological Survey, Chairman, Research Committee of the Masamas, 606 Post‐Office Building, Portland, Oregon William S. Cooper, Professor of Botany, University of Minnesota, Minneapolis, Minnesota Lieutenant Colonel Gerald FitzGerald, Army Air Corps, Washington, D.C. Laurence M. Gould, Professor of Geology, Carleton College, Northfield, Minnesota Arthur Johnson, Hydraulic Engineer, Conservation Branch, Geological Survey, 1105 Washington Building, Tacoma, Washington François E. Matthes (Chairman), Senior Geologist, Section of Glacial Geology, Geological Survey, Washington, D.C. The Committee is fortunate in having its membership reinforced by the addition of ARTHUR JOHNSON, who for several years has had charge of the repetitive plane‐table surveys of the lower Nisqually Glacier, on Mount Rainier—a project which the Geological Survey is carrying on in cooperation with the city of Tacoma, Washington. To him the Committee is indebted for data concerning the losses in volume of ice which the Nisqually Glacier is sustaining from year to year.

Eos, Transactions, American Geophysical Union↗

An assessment of optical properties of dissolved organic material as quantitative source indicators in the Santa Ana River basin, Southern California

The ability to rapidly, reliably, and inexpensively characterize sources of dissolved organic material (DOM) in watersheds would allow water management agencies to more quickly identify problems in water sources, and to more efficiently allocate water resources by, for example, permitting real-time identification of high-quality water suitable for ground-water recharge, or poor-quality water in need of mitigation. This study examined the feasibility of using easily measurable intrinsic optical properties' absorbance and fluorescence spectra, as quantitative indicators of DOM sources and, thus, a predictor of water quality. The study focused on the Santa Ana River Basin, in southern California, USA, which comprises an area of dense urban development and an area of intense dairy production. Base flow in the Santa Ana Basin is primarily tertiary treated wastewater discharge. Available hydrologic data indicate that urban and agricultural runoff degrades water quality during storm events by introducing pathogens, nutrients, and other contaminants, including significant amounts of DOM. These conditions provide the basis for evaluating the use of DOM optical properties as a tracer of DOM from different sources. Sample spectra representing four principal DOM sources were identified among all samples collected in 1999 on the basis of basin hydrology, and the distribution of spectral variability within all the sample data. A linear mixing model provided quantitative estimates of relative endmember contribution to sample spectra for monthly, storm, and diurnal samples. The spectral properties of the four sources (endmembers), Pristine Water, Wastewater, Urban Water, and Dairy Water, accounted for 94 percent of the variability in optical properties observed in the study, suggesting that all important DOM sources were represented. The scale and distribution of the residual spectra, that not explained by the endmembers, suggested that the endmember spectra selected did not adequately represent Urban Water base flow. However, model assignments of sources generally agreed well with those expected, based on sampling location and hydrology. The results suggest that with a fuller characterization of the endmember spectra, analysis of optical properties will provide rapid quantitative estimates of the relative contribution of DOM sources in the Santa Ana Basin.

Scientific Investigations Report↗

Design and methods of the California stream quality assessment (CSQA), 2017

During 2017, as part of the National Water-Quality Assessment Project, the U.S. Geological Survey conducted the California Stream Quality Assessment to investigate the quality of streams in the Central California Foothills and Coastal Mountains ecoregion, United States. The goal of the California Stream Quality Assessment study was to assess the health of wadeable streams in the region by characterizing multiple water-quality factors that are stressors to aquatic biota and by evaluating the relation between these stressors and biological indicators of stream health. Urbanization, agriculture, and modifications to streamflow are anthropogenic changes that affect water quality in the region; consequently, the study design primarily targeted sites and specific stressors associated with these activities. For the study, 85 stream sites were selected to represent the types and intensity of land use in the watershed; categories of site types were undeveloped, urban (low, medium, high), agriculture (low, high), and mixed (urban and agriculture). Most sites (about 70 percent) represent a gradient of urbanization from undeveloped to 99-percent urbanized. At most of the sites, streamgages or pressure transducers were used to monitor stream discharge and stage, as well as temperature. Water-quality samples were collected routinely at all sites and were analyzed for major ions, organic contaminants, nutrients, and suspended sediment. Sampling frequency varied on the basis of site type and location. Discrete water samples were collected weekly and generally 6 times per site, except for 11 undeveloped sites that were sampled only 4 times (during the last 4 weeks). Water sampling began at sites in the southern part of the study on March 13, 2017, and at sites in the northern part of the study on April 3, 2017. Passive samplers were deployed at most sites for measurement of polar organic contaminants (pesticides and pharmaceuticals). In May 2017, coincident with completion of water-quality sampling, an ecological survey was conducted at each site to assess benthic algal and macroinvertebrate communities and instream habitat. During the ecological surveys, a single composite streambed-sediment sample was collected for chemical analysis and toxicity testing. In addition, a few focused studies were done at subsets of sites, namely, measuring pesticides using small-volume automated samplers, measuring pesticides in biofilms, and sampling suspended sediments using passive samplers. This report describes the various study components and methods of the California Stream Quality Assessment, including measurements of water quality, sediment chemistry, habitat assessments, and ecological surveys, as well as procedures for sample analysis, quality assurance and quality control, and data management.

California↗

Trace element residues in bluegills and common carp from the lower San Joaquin River, California, and its tributaries

Whole-body samples of bluegills (Lepomis macrochirus) and common carp (Cyprinus carpio) from the San Joaquin River and two tributaries (Merced River and Salt Slough) were analyzed to determine if the concentrations of any of nine elements were elevated as a result of exposure of the fish to agricultural subsurface (tile) drainage water. Highest concentrations (μg/g dry weight) detected were as follows (first number in each pair applies to bluegills and the second to carp): arsenic (As), 0.97 and 1.5; boron (B), 14 and 20; cadmium (Cd), 0.14 and 0.27; chromium (Cr), 2.7 and 2.2; mercury (hg), 3.3 and 2.9; molybdenum (Mo), 2.8 and 3.6; nickel (Ni), 0.87 and 2.2; lead (Pb), 0.26 and 2.3; and selenium (Se), 3.2 and 5.5. The lowest concentrations were below the levels of detection, except for Hg (0.15 in bluegills and 0.12 in carp) and Se (0.43 and 0.56). As judged by comparisons with data from the National Contaminant Biomonitoring Program and other published surveys, the concentrations of B, Hg, Mo, and Se were moderately elevated in fish from several sites in the San Joaquin Valley. However, only the Se concentrations were positively correlated with water quality variables (e.g., total alkalinity, conductivity, and turbidity) known to be influenced by irrigation return flows. Historical data from one site (Salt Slough), where trace elements in whole fish have been measured since 1969, indicated that Se concentrations increased more than twofold between 1973 and 1977, but thereafter remained near 3.0 μg g−1 (dry weight basis), presumably due to the continuing practice of disposing seleniferous tile drainage water into the most convenient stream channel.

California↗

Groundwater quality in the Antelope Valley, California

Groundwater provides more than 40 percent of California’s drinking water. To protect this vital resource, the State of California created the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The Priority Basin Project of the GAMA Program provides a comprehensive assessment of the State’s groundwater quality and increases public access to groundwater-quality information. Antelope Valley is one of the study areas being evaluated. The Antelope study area is approximately 1,600 square miles (4,144 square kilometers) and includes the Antelope Valley groundwater basin (California Department of Water Resources, 2003). Antelope Valley has an arid climate and is part of the Mojave Desert. Average annual rainfall is about 6 inches (15 centimeters). The study area has internal drainage, with runoff from the surrounding mountains draining towards dry lakebeds in the lower parts of the valley. Land use in the study area is approximately 68 percent (%) natural (mostly shrubland and grassland), 24% agricultural, and 8% urban. The primary crops are pasture and hay. The largest urban areas are the cities of Palmdale and Lancaster (2010 populations of 152,000 and 156,000, respectively). Groundwater in this basin is used for public and domestic water supply and for irrigation. The main water-bearing units are gravel, sand, silt, and clay derived from surrounding mountains. The primary aquifers in Antelope Valley are defined as those parts of the aquifers corresponding to the perforated intervals of wells listed in the California Department of Public Health database. Public-supply wells in Antelope Valley are completed to depths between 360 and 700 feet (110 to 213 meters), consist of solid casing from the land surface to a depth of 180 to 350 feet (55 to 107 meters), and are screened or perforated below the solid casing. Recharge to the groundwater system is primarily runoff from the surrounding mountains, and by direct infiltration of irrigation and sewer and septic systems. The primary sources of discharge are pumping wells and evapotranspiration near the dry lakebeds.

California↗

Contaminants in eggs of aquatic birds from the grasslands of central California

Eggs were collected from the Grasslands of western Merced County, California, during 1986 and 1987, and at the Mendota Wildlife Area in Fresno County in 1987, as part of a reproductive study of nesting ducks and shorebirds. The eggs were analyzed to evaluate the effects of contaminants in agricultural drainwater on avian reproduction. Agricultural drainwater was the major source of water for irrigation and fall flooding in the Grasslands until the fall of 1985 when drainwater was mostly replaced by uncontaminated water. Drainwater had not been used at Mendota. Concentrations of arsenic and boron in eggs from all sites were lower than those known to harm avian reproduction. However, mean concentrations of selenium, a trace element known to impair avian reproduction at high dietary levels, were higher in eggs from the Grasslands than in eggs from the uncontaminated site. Although some selenium concentrations were as high as those found to have caused death or deformities at other sites, reproductive impairment was not observed in any ducks or shorebirds nesting in the Grasslands in 1986 or 1987.

California↗