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USGS2015

Surrogate analysis and index developer (SAID) tool and real-time data dissemination utilities

The use of acoustic and other parameters as surrogates for suspended-sediment concentrations (SSC) in rivers has been successful in multiple applications across the Nation. Critical to advancing the operational use of surrogates are tools to process and evaluate the data along with the subsequent development of regression models from which real-time sediment concentrations can be made available to the public. Recent developments in both areas are having an immediate impact on surrogate research, and on surrogate monitoring sites currently in operation. The Surrogate Analysis and Index Developer (SAID) standalone tool, under development by the U.S. Geological Survey (USGS), assists in the creation of regression models that relate response and explanatory variables by providing visual and quantitative diagnostics to the user. SAID also processes acoustic parameters to be used as explanatory variables for suspended-sediment concentrations. The sediment acoustic method utilizes acoustic parameters from fixed-mount stationary equipment. The background theory and method used by the tool have been described in recent publications, and the tool also serves to support sediment-acoustic-index methods being drafted by the multi-agency Sediment Acoustic Leadership Team (SALT), and other surrogate guidelines like USGS Techniques and Methods 3-C4 for turbidity and SSC. The regression models in SAID can be used in utilities that have been developed to work with the USGS National Water Information System (NWIS) and for the USGS National Real-Time Water Quality (NRTWQ) Web site. The real-time dissemination of predicted SSC and prediction intervals for each time step has substantial potential to improve understanding of sediment-related water-quality and associated engineering and ecological management decisions.

Conference Paper↗

USGS2021

White-nose Syndrome and environmental correlates to landscape-scale bat presence

Over the past 13 years, White-nose Syndrome (WNS) has caused North American bat population declines and shifted community structure towards species less or unaffected by the disease. Mist-netting, acoustic surveys, and cave count data have been used to document changes in bat presence and activity through site-specific, pre- and post-WNS studies. Management and survey guidance often must be applied at a combined landscape and site-specific scale. Our objective was to explore the relationships among WNS impact, influence of available hibernacula, and environmental factors for the nightly presence of 3 WNS-affected bats: the Indiana bat ( Myotis sodalis ), northern long-eared bat ( M. septentrionalis ), and big brown bat ( Eptesicus fuscus ). We used recordings from 10 acoustic monitoring study areas, each with 3 survey locations across the states of Virginia, West Virginia, Ohio and Kentucky to assess changes in nightly bat presence during the summer of 2017. There were significant positive and negative correlates of broad land-cover categories for presence of all 3 bat species. Our findings also corroborated trends in abundance and distribution patterns found in prior, smaller-scale studies, supporting the relevance of land cover categories in a large-scale acoustic monitoring framework. We observed a negative association between WNS impact-years and nightly northern long-eared bat presence, but low occurrence and patchy distribution reduced our ability to infer strong relationships. Big brown bat presence showed a significant positive relationship with WNS occurrence on the landscape, providing evidence that big brown bats are maintaining populations after years of exposure. Indiana bats were the least-documented species, limiting the strength of our conclusions, but we did observe significant temporal patterns in nightly presence, with higher probabilities of presence earlier in the summer. Our results show the potential efficacy of using a WNS impact metric to predict summer bat presence, inform current U.S. Fish and Wildlife Service acoustic monitoring guidelines, and highlight which environmental variables are relevant for large-scale acoustic monitoring.

Wildlife Society Bulletin↗

USGS1977

Structure and sediment distribution in the western Bering Sea

Eleven seismic reflection profiles across Shirshov Ridge and the adjacent deep-water sedimentary basins (Komandorsky and Aleutian Basins) are presented to illustrate the sediment distribution in the western Bering Sea. A prominent seismic reflecting horizon, Reflector P (Middle—Late Miocene in age), is observed throughout both the Aleutian and Komandorsky Basins at an approximate subbottom depth of 1 km. This reflector is also present, in places, on the flanks and along the crest of Shirshov Ridge. The thickness of sediments beneath Reflector P is significantly different within the two abyssal basins. In the Aleutian Basin, the total subbottom depth to acoustic basement (basalt?) is about 4 km, while in the Komandorsky Basin the depth is about 2 km. Shirshov Ridge, a Cenozoic volcanic feature that separates the Aleutian and Komandorsky Basins, is an asymmetric bathymetric ridge characterized by thick sediments along its eastern flank and steep scarps on its western side. The southern portion of the ridge has more structural relief that includes several deep, sediment-filled basins along its summit. Velocity data from sonobuoy measurements indicate that acoustic basement in the Komandorsky Basin has an average compressional wave velocity of 5.90 km/sec. This value is considerably larger than the velocities measured for acoustic basement in the northwestern Aleutian Basin (about 5.00 km/sec) and in the central Aleutian Basin (5.40–5.57 km/sec). In the northwestern Aleutian Basin, the low-velocity acoustic basement may be volcaniclastic sediments or other indurated sediments that are overlying true basaltic basement. A refracting horizon with similar velocities (4.6–5.0 km/sec) as acoustic basement dips steeply beneath the Siberian continental margin, reaching a maximum subbottom depth of about 8 km. The thick welt of sediment at the base of the Siberian margin may be the result of sediment loading or tectonic depression prior to Late Cenozoic time.

Alaska↗

USGS2009

The source of infrasound associated with long-period events at mount St. Helens

During the early stages of the 2004-2008 Mount St. Helens eruption, the source process that produced a sustained sequence of repetitive long-period (LP) seismic events also produced impulsive broadband infrasonic signals in the atmosphere. To assess whether the signals could be generated simply by seismic-acoustic coupling from the shallow LP events, we perform finite difference simulation of the seismo-acoustic wavefield using a single numerical scheme for the elastic ground and atmosphere. The effects of topography, velocity structure, wind, and source configuration are considered. The simulations show that a shallow source buried in a homogeneous elastic solid produces a complex wave train in the atmosphere consisting of P/SV and Rayleigh wave energy converted locally along the propagation path, and acoustic energy originating from , the source epicenter. Although the horizontal acoustic velocity of the latter is consistent with our data, the modeled amplitude ratios of pressure to vertical seismic velocity are too low in comparison with observations, and the characteristic differences in seismic and acoustic waveforms and spectra cannot be reproduced from a common point source. The observations therefore require a more complex source process in which the infrasonic signals are a record of only the broadband pressure excitation mechanism of the seismic LP events. The observations and numerical results can be explained by a model involving the repeated rapid pressure loss from a hydrothermal crack by venting into a shallow layer of loosely consolidated, highly permeable material. Heating by magmatic activity causes pressure to rise, periodically reaching the pressure threshold for rupture of the "valve" sealing the crack. Sudden opening of the valve generates the broadband infrasonic signal and simultaneously triggers the collapse of the crack, initiating resonance of the remaining fluid. Subtle waveform and amplitude variability of the infrasonic signals as recorded at an array 13.4 km to the NW of the volcano are attributed primarily to atmospheric boundary layer propagation effects, superimposed upon amplitude changes at the source.

Washington↗

USGS2012

Fracture characterization by means of attenuation and generation of tube waves in fractured crystalline rock at Mirror Lake, New Hampshire

Results are presented from experiments carried out in conjunction with the U. S. Geological Survey at the Hubbard Brook Experimental Forest near Mirror Lake, New Hampshire. The study focuses on our ability to obtain orientation and transmissivity estimates of naturally occurring fractures. The collected data set includes a four-offset hydrophone vertical seismic profile, full waveform acoustic logs at 5, 15, and 34 kHz, borehole televiewer, temperature, resistivity, and self-potential logs, and borehole-to-borehole pump test data. Borehole televiewer and other geophysical logs indicate that permeable fractures intersect the Mirror Lake boreholes at numerous depths, but less than half of these fractures appear to have significant permeability beyond the annulus of drilling disturbance on the basis of acoustic waveform log analysis. The vertical seismic profiling (VSP) data indicate a single major permeable fracture near a depth of 44 m, corresponding to one of the most permeable fractures identified in the acoustic waveform log analysis. VSP data also indicate a somewhat less permeable fracture at 220 m and possible fractures at depths of 103 and 135 m; all correspond to major permeable fractures in the acoustic waveform data set. Pump test data confirm the presence of a hydraulic connection between the Mirror Lake boreholes through a shallow dipping zone of permeability at 44 m in depth. Effective fracture apertures calculated from modeled transmissivities correspond to those estimated for the largest fractures indicated on acoustic waveform logs but are over an order of magnitude larger than effective apertures calculated from tube waves in the VSP data set. This discrepancy is attributed to the effect of fracture stiffness. A new model is presented to account for the mechanical strength of asperities in resisting fracture closure during the passage of seismic waves during the generation of VSPs.

New Hampshire↗

USGS2011

Diel activity of Gulf of Mexico sturgeon in a northwest Florida bay

In this paper, we assess patterns in activity of Gulf of Mexico sturgeon Acipenser oxyrinchus desotoi over a 24-h period in the Pensacola bay system, Florida. Although seasonal migration of sturgeon is well documented, little information is available pertaining to daily variation in activity. We surgically implanted 58 Gulf sturgeon with acoustic transmitters in the Escambia (n=26), Yellow (n=8), Blackwater (n=12) and Choctawhatchee rivers (n=12) in June, July, September and October 2005. Gulf sturgeon location was monitored using an array of 56 fixed-station acoustic receivers. The relationship between frequency of Gulf sturgeon observations recorded on all acoustic receivers and time of day for all seasons combined indicated a strong diel activity pattern. Gulf sturgeon were frequently detected at night in all seasons with the exception of summer. Consecutive hourly observations indicated lateral movement of Gulf sturgeon between independent acoustic receivers on 15% of all observations of individuals. The use of an acoustic receiver array not only provides continuous data within a defined area, but also provides insight into nocturnal behavior of Gulf sturgeon not previously identified. ?? 2011 Blackwell Verlag, Berlin.

Journal of Applied Ichthyology↗

USGS1966

Exposure of basement rock on the continental slope of the Bering Sea

Profiles of repetitive seismic reflections reveal that the Bering continental slope, outer shelf, and rise overlay an acoustically reflective "basement" which extends at least 750 kilometers parallel to the trend of the slope. This acoustic basement is usually covered by several hundred meters of stratified sediments at the top and bottom of the slope; however, it is exposed in submarine canyons and flanking spurs along the main part of the slope for a distance of at least 550 kilometers northwest of the Pribilof Islands. The lithologic composition and the age of the rocks of the acoustic basement are not known. However, its probable seismic velocity of 3.1 to 3.7 kilometers per second suggests that it is composed of volcanic rocks or lithified sedimentary rocks or both. The regional geology suggests that the acoustic basement is the upper surface of folded late Mesozoic rocks which were locally intruded by granite and serpentine. The structure of the Bering slope, as deduced from the acoustic profiles, suggests that the surface of the basement has been monoclinically flexed and faulted between the shelf edge and the deep Aleutian Basin.

Alaska↗

USGS2015

In-reservoir behavior, dam passage, and downstream migration of juvenile Chinook salmon and juvenile steelhead from Detroit Reservoir and Dam to Portland, Oregon, February 2013-February 2014

In the second year of 2 years of study, the movements of juvenile spring Chinook salmon ( Oncorhynchus tshawytscha ) and juvenile summer steelhead ( Oncorhynchus mykiss ) through Detroit Reservoir, passing Detroit Dam, and migrating downstream to Portland, Oregon, were studied during a 1-year-long period beginning in February 2013. The primary purpose of the study was to provide empirical data to inform decisions about future alternatives for improving downstream passage of salmonids at Detroit Dam. A secondary purpose was to design and assess the performance of a system to detect juvenile salmonids implanted with acoustic transmitters migrating in the Willamette River. Inferences about fish migration were made from detections of juvenile fish of hatchery origin at least 95 millimeters in fork length surgically implanted with an acoustic transmitter and released during the spring (March–May) and fall (September–November) of 2013. Detection sites were placed throughout the reservoir, near the dam, and at two sites in the North Santiam River and at three sites in the Willamette River culminating at Portland, Oregon. We based most inferences on an analysis period up to the 90th percentile of tag life (68–78 days after release, depending on species and season), although a small number of fish passed after that period as late as April 8, 2014. Chinook salmon migrated from the tributaries of release to the reservoir in greater proportion than steelhead, particularly in the fall. The in-reservoir migration behaviors and dam passage of the two species were similar during the spring study, but during the fall study, few steelhead reached the reservoir and none passed the dam within the analysis period. Migrations in the reservoir were directed and non-random, except in the forebay. Depths of fish within 25 meters of the dam were deeper in the day than at night for Chinook salmon and similar in the day and night for steelhead; steelhead generally were at shallower depths than Chinook salmon. The primary factors affecting dam passage rates were seasonal dam operating conditions and diel period. Fish passage rates were much greater during the spring and summer than in the fall and winter, and the difference was attributed to the availability and use of the spillway near the top of the dam during the spring and summer. The flood-control purpose of the reservoir prevented spillway use during much of the fall and winter because of the low forebay elevation. Passage rates at night were greater than in the day during spring and summer (4.2 times) and during the fall and winter (14.9 times). Fish length, dam discharge, and forebay elevation also affected dam passage rates. Travel times from Detroit Dam passage to the downstream sites were shorter during the fall and winter than during the spring and summer, and were less than a median of 8.68 days to Portland. The estimated survival in the 11 kilometers (km) between Detroit Dam and the Minto Dam forebay was lower than in the remaining 241 km to the Portland site. Estimated survival per 100 km in the free-flowing reach from Minto Dam to Portland was 0.675–0.836, depending on species and season, and was similar to other free-flowing rivers in the Western United States. The high probability of fish in the reservoir reaching the dam, the chance for repeated presence near the dam, the fish depths, and the factors known to affect passage rates suggest that a properly designed surface passage route could be a viable downstream passage alternative for juvenile Chinook salmon and steelhead at Detroit Dam. As part of the evaluations conducted at Detroit Dam, we continued to refine and improve methods for monitoring fish movements in the Willamette River. The goal was to develop stable, cost-effective, long-term monitoring arrays suitable for detection of any Juvenile Salmon Acoustic Telemetry System (JSATS)-tagged fish in the Willamette River. These data then could be used to estimate timing, migration rates, and survival of JSATS-tagged fish from various studies in the Willamette River Basin. The challenge, however, is that acoustic telemetry generally performs poorly in shallow, turbulent water, like that found in the Willamette River. We successfully designed, deployed, and maintained a series of monitoring sites near the Oregon cities of Salem, Wilsonville, and Portland. In the spring, detection probabilities at these sites ranged from 0.900 to 1.000. In the fall, the detection probabilities decreased and ranged from 0.526 to 1.000. The lower detection probabilities, particularly at the Salem site (0.526), were owing to loss of data caused by abnormally high flows as well as the 2013 Federal government shutdown, which prevented us from servicing the equipment. The monitoring sites that we installed seem to be robust and enable the efficient use of acoustic-tagged fish for studies of migration or survival in the Willamette River and similar environments.

Oregon↗

USGS2015

Surrogate Analysis and Index Developer (SAID) tool

The use of acoustic and other parameters as surrogates for suspended-sediment concentrations (SSC) in rivers has been successful in multiple applications across the Nation. Tools to process and evaluate the data are critical to advancing the operational use of surrogates along with the subsequent development of regression models from which real-time sediment concentrations can be made available to the public. Recent developments in both areas are having an immediate impact on surrogate research and on surrogate monitoring sites currently (2015) in operation. The Surrogate Analysis and Index Developer (SAID) standalone tool, under development by the U.S. Geological Survey (USGS), assists in the creation of linear regression models that relate constituent and surrogate parameters by providing visual and quantitative diagnostics to the user. SAID also processes acoustic parameters to be used as explanatory variables for SSC. The sediment acoustic method utilizes acoustic parameters from fixed-mount stationary equipment. The theory and method used by the SAID tool have been described in recent publications. The tool also serves to support sediment-acoustic-index methods and other surrogate guidelines such as turbidity and SSC (Rasmussen and others, 2009). The regression models created in SAID can be used in utilities that have been developed to work with the USGS National Water Information System (NWIS) and for the USGS National Real-Time Water Quality (NRTWQ) Web site. The real-time dissemination of predicted SSC and prediction intervals for each time step has substantial potential to improve understanding of sediment-related water quality and associated engineering and ecological management decisions.

Open-File Report↗

USGS2016

Survival of juvenile chinook salmon and coho salmon in the Roza Dam fish bypass and in downstream reaches of the Yakima River, Washington, 2016

Estimates of juvenile salmon survival are important data for fishery managers in the Yakima River Basin. Radiotelemetry studies during 2012–14 showed that tagged juvenile Chinook salmon ( Oncorhynchus tshawytscha ) that passed through the fish bypass at Roza Dam had lower survival than fish that passed through other routes at the dam. That study also identified flow-survival relationships in the reaches between the Roza Dam tailrace and Sunnyside Dam. During 2012–14, survival also was estimated through reaches downstream of Sunnyside Dam, but generally, sample sizes were low and the estimates were imprecise. In 2016, we conducted an evaluation using acoustic cameras and acoustic telemetry to build on information collected during the previous study. The goal of the 2016 research was to identify areas where mortality occurs in the fish bypass at Roza Dam, and to estimate reach-specific survival in reaches downstream of the dam. The 2016 study included juvenile Chinook salmon and coho salmon ( O. kisutch ). Three acoustic cameras were used to observe fish behavior (1) near the entrances to the fish bypass, (2) at a midway point in the fish bypass (convergence vault), and (3) at the bypass outfall. In total, 504 hours of acoustic camera footage was collected at these locations. We determined that smolt-sized fish (95–170 millimeters [mm]) were present in the highest proportions at each location, but predator-sized fish (greater than 250 mm) also were present at each site. Fish presence generally peaked during nighttime hours and crepuscular periods, and was low during daytime hours. In the convergence vault, smolt-sized fish exhibited holding behavior patterns, which may explain why some fish delayed while passing through the bypass. Some of the acoustic-tagged fish were delayed in the fish bypass following release, but there was no evidence to suggest that they experienced higher mortality than fish that were released at the bypass outfall or downstream of the dam. Most of the tagged fish that were released in the fish bypass moved downstream and re-entered the river within 12 hours, but 9.8 percent of the Chinook salmon and 15.7 percent of the coho salmon remained in the bypass for 2.5–17.4 days. We developed a set of models for Chinook salmon and coho salmon and used model selection to determine if release site was an important predictor of survival of tagged fish. The models that provided the best fit to the Chinook salmon and coho salmon datasets did not include release site as a covariate. Furthermore, survival estimates for groups of fish from the various release sites were nearly identical for both species. Based on these observations, it appears that passage through the fish bypass did not result in increased mortality relative to groups of fish released downstream of the bypass. Juvenile Chinook salmon migrated downstream faster than juvenile coho salmon and survival for each species varied with release timing. Median travel time from release at Roza Dam to arrival at a detection gate located at river kilometer (rkm) 527.8 on the Columbia River was 15.4 days for Chinook salmon and 37.4 days for coho salmon. Cumulative survival from Roza Dam to the Columbia River detection gate ranged from 0.299 to 0.678 for Chinook salmon, and from 0.321 to 0.627 for coho salmon. Survival was highest for both species when tagged fish were released in mid-April and lowest when tagged fish were released in early-May. Reach-specific survival estimates were standardized to create estimates that described survival per 100 rkm, which showed that survival was very low (less than 0.500) for some release groups, particularly in the Roza, Sunnyside, and Chandler diversion reaches. A more extensive analysis of reach-specific survival is planned for this dataset, which should provide insights into covariates that affected survival during 2016.

Washington↗

USGS2004

Investigation of hydroacoustic flow-monitoring alternatives at the Sacramento River at Freeport, California: results of the 2002-2004 pilot study

The Sacramento River at Freeport is a tidally affected channel approximately 620 feet wide located at the northern boundary of the Sacramento?San Joaquin River Delta, California. In 1978, an acoustic velocity meter was installed at Freeport to monitor the flow. The acoustic velocity meter was calibrated successfully and has been used continuously since that time. Although the calibration has been extremely stable, an increasing number of maintenance problems prompted a search for alternatives to monitor discharge at this location. Two sideward-looking acoustic Doppler velocity meters were tested in a pilot study from 2002-2004: a short-range system and a long-range system. The pilot study was conducted over a wide range of hydrologic conditions and both sideward-l-ooking acoustic Doppler velocity meters have performed well at this location and have been calibrated successfully. As of February 2004, the short-range system had a robust calibration and a higher data-recovery rate, therefore, it was selected as the primary replacement of the acoustic velocity meter, with the long-range system providing real-time data redundancy to minimize data loss.

Scientific Investigations Report↗

USGS1987

Geophysical well log analysis of fractured granitic rocks at Atikokan, Ontario, Canada

Two boreholes, drilled to approximate depths of 750 and 1,260 m in a granitic intrusion located near Atikokan, Ontario, were studied by obtaining a full suite of conventional borehole geophysical logs. In addition, selected intervals in these boreholes were logged with a borehole acoustic televiewer that produces a high-resolution image of the borehole wall, an acoustic waveform-logging system using 34-kiloHertz magnetostrictive and 5-kiloHertz sparker sources, and a highly sensitive heat-pulse flowmeter. Emphasis was on identifying and characterizing fracture zones that represent groundwater conduits in deeper portions of the granite, and on characterizing the properties of the largest intervals of unfractured granite. Major fracture zones were indicated by correlating geophysical log anomalies detected on the suite of conventional logs (unpublished data from Atomic Energy of Canada). However, several other anomalies, were identified as mafic intrusions of approximately the same thickness as major fracture zones. Geophysical log anomalies were compared for all major fracture zones that could serve as significant groundwater conduits, and fracture zone permeability is estimated on the basis of acoustic tube-wave attenuation in these intervals. Acoustic televiewer logs obtained at depths below 1,000 m in the deeper well indicate that most of the few fractures identified on core at these depths do not remain open enough under in situ conditions to produce detectable anomalies in acoustic refraction. Flowmeter data indicate that some groundwater circulation occurs in the upper portion of both boreholes. Water in the shallower of the two holes was observed to flow at 2.0 L/min; most of this flow entered the borehole at a depth < 25 m, and no flow occurred below a depth of 100 m. Downflow at rates < 0.5 L/min was determined to enter the deeper borehole within 20 m of the surface, and to exist at various fractures down to a depth of 250 m. (Author 's abstract)

Water-Resources Investigations Report↗

USGS1988

Fracture characterization and fracture-permeability estimation at the underground research laboratory in southeastern Manitoba, Canada

Various conventional geophysical well logs were obtained in conjunction with acoustic tube-wave amplitude and experimental heat-pulse flowmeter measurements in two deep boreholes in granitic rocks on the Canadian shield in southeastern Manitoba. The objective of this study is the development of measurement techniques and data processing methods for characterization of rock volumes that might be suitable for hosting a nuclear waste repository. One borehole, WRA1, intersected several major fracture zones, and was suitable for testing quantitative permeability estimation methods. The other borehole, URL13, appeared to intersect almost no permeable fractures; it was suitable for testing methods for the characterization of rocks of very small permeability and uniform thermo-mechanical properties in a potential repository horizon. Epithermal neutron , acoustic transit time, and single-point resistance logs provided useful, qualitative indications of fractures in the extensively fractured borehole, WRA1. A single-point log indicates both weathering and the degree of opening of a fracture-borehole intersection. All logs indicate the large intervals of mechanically and geochemically uniform, unfractured granite below depths of 300 m in the relatively unfractured borehole, URL13. Some indications of minor fracturing were identified in that borehole, with one possible fracture at a depth of about 914 m, producing a major acoustic waveform anomaly. Comparison of acoustic tube-wave attenuation with models of tube-wave attenuation in infinite fractures of given aperture provide permeability estimates ranging from equivalent single-fractured apertures of less than 0.01 mm to apertures of > 0.5 mm. One possible fracture anomaly in borehole URL13 at a depth of about 914 m corresponds with a thin mafic dike on the core where unusually large acoustic contrast may have produced the observed waveform anomaly. No indications of naturally occurring flow existed in borehole URL13; however, flowmeter measurements indicated flow at < 0.05 L/min from the upper fracture zones in borehole WRA1 to deeper fractures at depths below 800 m. (Author 's abstract)

Water-Resources Investigations Report↗

USGS2022

Broad-scale geographic and temporal assessment of northern long-eared bat (Myotis septentrionalis) maternity colony-landscape association

As the federally threatened northern long-eared bat Myotis septentrionalis continues to decline due to white-nose syndrome (WNS) impacts, the application of effective conservation measures is needed but often hindered by the lack of ecological data. To date, recommended management practices have been adopted in part from other federally listed sympatric species such as the endangered Indiana bat M. sodalis . During the maternity season, these measures have largely focused on conservation of known day-roost habitat, often with little consideration for foraging habitat, particularly riparian areas. We examined acoustic activity of northern long-eared bats relative to day-roost and capture data at coastal and interior sites in the District of Columbia, New York, Pennsylvania, Virginia, and West Virginia, USA, over the course of 6 summers (2015-2020), where maternity activity was still documented after the initial arrival and spread of WNS. Acoustic activity of northern long-eared bats relative to forest cover decreased at the acoustic site level (fine scale) but increased at the sampling region level (coarse scale). We observed a positive association of northern long-eared bat acoustic activity with riparian areas. Additionally, we observed higher levels of activity during pregnancy through early lactation period of the reproductive cycle prior to juvenile volancy. Our findings suggest the need for more explicit inclusion of forested riparian habitats in northern long-eared bat conservation planning. Acoustic sampling in spring and early summer rather than mid- to late summer and in forested riparian areas is the most effective strategy for identifying potential active northern long-eared bat maternity colonies on the local landscape.

Maryland, New York, Pennsylvania, Virginia, and We↗

USGS2026

Inventory of bat activity at Pearl Harbor National Memorial to inform historic preservation and compliance

We examined ‘ōpe‘ape‘a, or Hawaiian hoary bat ( Lasiurus semotus ; Chiroptera: Vespertilionidae), acoustic activity and surveyed potential roost trees at the Ford Island Chief Petty Officer’s (CPO) Bungalows Neighborhood of Pearl Harbor National Memorial (PERL) on the island of O‘ahu. We established four acoustic monitoring stations (PERL1–PERL4) that operated nightly to survey for ‘ōpe‘ape‘a echolocation activity from June to December 2024. Tree physiognomy data were collected at 12 potential roost trees and included tree species, tree height, diameter at breast height (DBH), percent canopy cover, distance to nearest tree, elevation, and canopy geometry. We collected 357,802 acoustic files over 672 station-nights across the four acoustic monitoring stations. ‘Ōpe‘ape‘a echolocation activity was detected over a total of 26 (4%) station-nights and during each month of the survey period except June. Echolocation activity peaked in September and October 2024, which is during the post-lactation and fledging period. These results represent a baseline for assessing ‘ōpe‘ape‘a acoustic activity and potential roosting resources in PERL.

Hawaii↗

USGS2002

Hydroacoustic Current Meters for the Measurement of Discharge in Shallow Rivers and Streams

The U.S. Geological Survey (USGS) is evaluating the use of hydroacoustic current meters for making discharge measurements in shallow rivers and streams. The USGS historically has made discharge measurements in shallow rivers using mechanical, impellor-type current meters attached to a wading rod. The evaluation project has focused on three categories of hydroacoustic meters: an acoustic Doppler velocimeter (ADV) called a Flowtracker3, an acoustic Doppler velocity profiler (BoogieDopp), and bottom-tracking acoustic Doppler current profilers (ADCPs). The USGS role in this project includes providing USGS discharge-computation methods and algorithms to instrument manufacturers and evaluating instruments in the laboratory and field. An ADV (Flowtracker) designed for making discharge measurements in shallow rivers, has been tested in a USGS tow tank and was found to meet USGS calibration standards for mechanical, impellor-type current meters. The Flowtracker was field tested by USGS offices in five states; the tests were conducted by comparing discharge measurements made with the ADV to discharge measurements made with mechanical, impellor-type current meters. In general, the comparisons of Flowtracker performance to mechanical-meter results were favorable. An acoustic Doppler velocity profiler (BoogieDopp) is being evaluated for making discharge measurements in shallow rivers. The Boogiedopp will measure vertical velocity profiles at stationary positions across a channel, and the velocity profiles will be used to compute discharge. Discharge-computation software based on USGS methods and algorithms is under development for the acoustic Doppler velocity profiler. The USGS will evaluate bottom-tracking ADCPs from two manufacturers for making discharge measurements in shallow water. The bottom-tracking feature allows ADCPs to compute discharge from a moving platform as the platform moves across the channel.

Conference Paper↗

USGS2012

Well log characterization of natural gas-hydrates

In the last 25 years there have been significant advancements in the use of well-logging tools to acquire detailed information on the occurrence of gas hydrates in nature: whereas wireline electrical resistivity and acoustic logs were formerly used to identify gas-hydrate occurrences in wells drilled in Arctic permafrost environments, more advanced wireline and logging-while-drilling (LWD) tools are now routinely used to examine the petrophysical nature of gas-hydrate reservoirs and the distribution and concentration of gas hydrates within various complex reservoir systems. Resistivity- and acoustic-logging tools are the most widely used for estimating the gas-hydrate content (i.e., reservoir saturations) in various sediment types and geologic settings. Recent integrated sediment coring and well-log studies have confirmed that electrical-resistivity and acoustic-velocity data can yield accurate gas-hydrate saturations in sediment grain-supported (isotropic) systems such as sand reservoirs, but more advanced log-analysis models are required to characterize gas hydrate in fractured (anisotropic) reservoir systems. New well-logging tools designed to make directionally oriented acoustic and propagation-resistivity log measurements provide the data needed to analyze the acoustic and electrical anisotropic properties of both highly interbedded and fracture-dominated gas-hydrate reservoirs. Advancements in nuclear magnetic resonance (NMR) logging and wireline formation testing (WFT) also allow for the characterization of gas hydrate at the pore scale. Integrated NMR and formation testing studies from northern Canada and Alaska have yielded valuable insight into how gas hydrates are physically distributed in sediments and the occurrence and nature of pore fluids(i.e., free water along with clay- and capillary-bound water) in gas-hydrate-bearing reservoirs. Information on the distribution of gas hydrate at the pore scale has provided invaluable insight on the mechanisms controlling the formation and occurrence of gas hydrate in nature along with data on gas-hydrate reservoir properties (i.e., porosities and permeabilities) needed to accurately predict gas production rates for various gas-hydrate production schemes.

Book↗

USGS2020

USGS Telemetry Project

Telemetry of acoustically tagged bigheaded carp (i.e., bighead carp Hypophthalmichthys nobilis and silver carp H. molitrix ) and surrogate fish species has become an invaluable tool in management for these species in the upper Illinois Waterway Systems (i.e., upper Illinois River, lower Des Plaines River, and Chicago Area Waterway System). For example, movement probabilities between adjacent navigation pools need to be estimated to parameterize the Spatially Explicit Asian Carp Population Model (SEAcarP). SEAcarP is a population model used in scenario planning by the Monitoring and Response Workgroup (MRWG) to evaluate alternative management actions. These movement probabilities are estimated from the telemetry data obtained from a longitudinal network of strategically placed receivers that detect bigheaded carp that have been implanted with acoustic transmitters. In addition, fish removal by contracted fishers has become the primary method of controlling bigheaded carp in the upper Illinois and lower Des Plaines Rivers. Variable patterns in bigheaded carp distribution, habitat, and movement, influenced by seasonal and environmental conditions, make targeting bigheaded carp for removal and containment challenging and costly. Understanding these movement patterns for bigheaded carp through modeling and real-time telemetry applications informs removal efforts and facilitates monitoring and contingency actions based on fish movements. To develop a better understanding of fish movement dynamics to meet management objectives, an existing network of real-time and data-logging acoustic receivers in the upper Illinois Waterway Systems is collaboratively managed by a multi-agency team (see Participating Agencies section above). A Telemetry Workgroup has been established by the MRWG to ensure that the multi-agency telemetry efforts are coordinated to efficiently and effectively meet the MRWG goals. This workgroup plans and executes the placement of receivers, tagging of bigheaded carp with acoustic tags, and management of the telemetry data. Three primary objectives to meet MRWG goals identified by the Telemetry Workgroup included (1) development of a common standardized telemetry database with visualization and analysis tools, (2) transitioning from Program MARK (http://www.phidot.org/software/mark/) to a custom Bayesian multi-state model for estimating movement probabilities needed for SEAcarP and (3) deploying, maintaining, and serving data from real-time acoustic receivers to inform contingency planning and fish removal. A telemetry database and visualization tools (FishTracks) will facilitate standardization, archiving, sharing, quality assurance, visualization and analysis of the telemetry data needed for management. Modifications and additions to FishTracks will facilitate more problem-free use of the database and associated applications, as well as useful extraction of information to meet management goals. The transition to a custom Bayesian multi-state model to estimate movement probabilities will support more efficient, effective, and robust population modeling with SEAcarP by overcoming short comings of Program MARK for this purpose. These shortcomings include lack of customizability and extensibility, problems of singularities and poor-convergence, software crashes, parameter exclusion from models, an inability to consistently generate estimates of movement probability, and a lack of uncertainty estimates for movement probabilities. A real-time receiver network that is maintained and tested annually will ensure reliability and accuracy of the real-time alerts to bigheaded carp movements that can be used by management to plan contingency actions.

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