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Environmental conditions affecting the efficiency and efficacy of piscicides for use in nonnative fish eradication

Conservation of native fish is a pressing issue for fisheries managers. Conservation efforts often require eliminating threats posed by nonnative fish by eradicating them with piscicides. The piscicides rotenone and antimycin are used for eradication but their application is often inefficient or ineffective. My goal was to increase the efficiency and efficacy of nonnative fish eradication using piscicides. I identified environmental conditions affecting piscicide application, researched methods to overcome these problems, and provided tools that piscicide applicators can use to make piscicide application more efficient and effective. Rotenone and antimycin were exposed to varying levels of sunlight, turbulence, and dissolved organic matter (DOM) to determine the effect these environmental conditions have on piscicides. Bioassay fish were used to determine the toxicity of the piscicides. Sunlight and turbulence affected rotenone and antimycin but DOM did not. Increasing the concentration of chemical can increase the resistance to the effects of these environmental conditions; however, the effects of these conditions are considerable in natural settings. Observations of bioassay fish in stream applications of rotenone were used to develop a statistical model to predict the persistence of the piscicide. The model can be used to predict rotenone persistence in small montane streams and to estimate where rotenone concentrations need to be fortified. I measured the mixing rate of a chemical plume in different channel morphologies and at center or edge applications. Center application had a significantly shorter mixing distance than edge application, but mixing distance was not different among meandering, straight, and riffle/pool morphologies. Application of my findings will increase the efficiency and efficacy of native fish conservation using piscicides.

Thesis

Supporting the adaptive capacity of species through more effective knowledge exchange with conservation practitioners

There is an imperative for conservation practitioners to facilitate the ability of biodiversity to adapt to accelerating environmental change. Evolutionary biologists are well-positioned to inform the development of evidence-based management strategies that will effectively support the adaptive capacity of species and ecosystems. Conservation practitioners increasingly accept that management practices must change, but harbor concerns about how to apply recommended changes to their management contexts. Given the goodwill from both conservation practitioners and evolutionary biologists, we believe there is opportunity to accelerate the required changes by promoting closer collaboration between these two groups. We highlight how evolutionary biologists can harness lessons learned via the evidence-based conservation movement to make a substantive contribution to the development of effective conservation management practices. These lessons include: 1) recognising why practitioners do and do not use scientific evidence; 2) building an evidence base that will influence management decisions; 3) translating theory into a format that conservation practitioners can use to inform management practices; and 4) developing strategies for effective knowledge exchange. Although efforts will be required on both sides, we believe there are rewards for both practitioners and evolutionary biologists, not least of which is fostering practices that will help support the long-term persistence of species.

Evolutionary Applications

Southern Great Plains Rapid Ecoregional assessment—Volume I. Ecological communities

The Southern Great Plains Rapid Ecoregional Assessment was conducted in partnership with the Bureau of Land Management (BLM) and the Great Plains Landscape Conservation Cooperative . The overall goal of the Rapid Ecoregional Assessments (REAs) is to compile and synthesize regional datasets to facilitate evaluation of the cumulative effects of change agents on priority ecological communities and species. In particular, the REAs identify and map the distribution of communities and wildlife habitats at broad spatial extents and provide assessments of ecological conditions. The REAs also identify where and to what degree ecological resources are currently at risk from change agents, such as development, fire, invasive species, and climate change. The REAs can help managers identify and prioritize potential areas for conservation or restoration, assess cumulative effects as required by the National Environmental Policy Act, and inform landscape-level planning and management decisions for multiple uses of public lands. Management questions form the basis for the REA framework and were developed in conjunction with the BLM and other stakeholders. Conservation elements are communities and species that are of regional management concern. Core management questions relate to the key ecological attributes and change agents associated with each conservation element. Integrated management questions synthesize the results of the primary core management questions into overall landscape-level ranks for each conservation element. The ecological communities evaluated as conservation elements are shortgrass, mixed-grass, and sand prairies; all grasslands; riparian and nonplaya wetlands; playa wetlands and saline lakes; and prairie streams and rivers. Species and species assemblages evaluated are the freshwater mussel assemblage, Arkansas River shiner ( Notropis girardi ), ferruginous hawk ( Buteo regalis ), lesser prairie chicken ( Tympanuchus pallidicinctus ), snowy plover ( Charadrius nivosus ), mountain plover ( Charadrius montanus ), long-billed curlew ( Numenius americanus ), interior least tern ( Sternula antillarum athalassos ), burrowing owl ( Athene cunicularia hypugaea ), black-tailed prairie dog ( Cynomys ludovicianus ), bat assemblage, swift fox ( Vulpes velox ), and mule deer ( Odocoileus hemionus ). The Southern Great Plains REA is summarized in a series of three reports and associated datasets. The pre-assessment report (available online at https://pubs.usgs.gov/of/2015/1003/ ) summarizes the process used by the REA stakeholders to select management questions, conservation elements, and change agents. It also provides background information for each conservation element. Volume I of the Southern Great Plains REA report (this volume) addresses the ecological communities. Volume II will address the species and species assemblages. All source and derived datasets used to produce the maps and graphs for REAs are available online at the BLM Landscape Approach Data Portal ( https://landscape.blm.gov/geoportal/catalog/REAs/REAs.page ).

Colorado, Kansas, Nebraska, New Mexico, Oklahoma,

Southern Great Plains Rapid Ecoregional Assessment—Volume II. Species and assemblages

The Southern Great Plains Rapid Ecoregional Assessment was conducted in partnership with the Bureau of Land Management (BLM) and the Great Plains Landscape Conservation Cooperative. The overall goal of the Rapid Ecoregional Assessments (REAs) is to compile and synthesize regional datasets to facilitate evaluation of the cumulative effects of change agents on priority ecological communities and species. In particular, the REAs identify and map the distribution of communities and wildlife habitats at broad spatial extents and provide assessments of ecological conditions. The REAs also identify where and to what degree ecological resources are currently at risk from change agents, such as development, fire, invasive species, and climate change. The REAs can help managers identify and prioritize potential areas for conservation or restoration, assess cumulative effects as required by the National Environmental Policy Act, and inform landscape-level planning and management decisions for multiple uses of public lands. Management questions form the basis for the REA framework and were developed in conjunction with the BLM and other stakeholders. Conservation elements are communities and species that are of regional management concern. Core management questions relate to the key ecological attributes and change agents associated with each conservation element. Integrated management questions synthesize the results of the primary core management questions into overall landscape-level ranks for each conservation element. The ecological communities evaluated as conservation elements are shortgrass, mixed-grass, and sand prairies; all grasslands; riparian and nonplaya wetlands; playa wetlands and saline lakes; and prairie streams and rivers. Species and species assemblages evaluated are the freshwater mussel assemblage, Arkansas River shiner ( Notropis girardi ), ferruginous hawk ( Buteo regalis ), lesser prairie chicken ( Tympanuchus pallidicinctus ), snowy plover ( Charadrius nivosus ), mountain plover ( Charadrius montanus ), long-billed curlew ( Numenius americanus ), interior least tern ( Sternula antillarum athalassos ), burrowing owl ( Athene cunicularia ), black-tailed prairie dog ( Cynomys ludovicianus ), bat assemblage, swift fox ( Vulpes velox ), and mule deer ( Odocoileus hemionus ). The Southern Great Plains REA is summarized in a series of three reports and associated datasets. The pre-assessment report (available online at https://doi.org/10.3133/ofr20151003 ) summarizes the process used by the REA stakeholders to select management questions, conservation elements, and change agents. It also provides background information for each conservation element. Volume I of the Southern Great Plains REA report addresses the ecological communities (available online at https://doi.org/10.3133/ofr20171100 ). Volume II (this volume) addresses the species and species assemblages. All source and derived datasets used to produce the maps and graphs for REAs are available online at the BLM Landscape Approach Data Portal ( https://landscape.blm.gov/geoportal/catalog/REAs/REAs.page ).

Colorado, Kansas, Nebraska, New Mexico, Oklahoma,

Proceedings of the 12th Biennial Conference of research on the Colorado Plateau

Introduction The Colorado Plateau is a physiographic region that encompasses 330,000 square kilometers in parts of four states in the southwestern United States (Colorado, Utah, New Mexico, and Arizona). Known for its high deserts, the Colorado Plateau also includes isolated mountains, high plateaus, and rugged canyons. Not only is the region topographically diverse, but geologically, biologically, and culturally diverse as well. The landscape is managed by Federal entities including the Bureau of Land Management, the National Park Service, and the U.S. Forest Service; Tribal nations including the Navajo Nation, Kaibab Paiute, Mountain Ute, Southern Ute, Hopi, Zuni, Hualapai, Havasupai, and White Mountain Apache Tribes; State land and wildlife management agencies; and privately owned holdings, creating complex interactions and management challenges. Population growth, increased tourism to Federal and State lands, and energy development have increased water demands and altered land-use patterns, and these changes have emerged as management challenges facing the people working and living in the region. Climate change, particularly the ongoing drought, has exacerbated the effects of population growth, land-use change, and other stressors such as invasive species. As managers seek solutions to the challenges facing the region’s natural and cultural resources, the Biennial Conference of Science and Management of the Colorado Plateau has become an important venue for exchanging information about emerging management concerns and recent scientific research. Each biennial conference has sought to promote discussion, information sharing, and productive communication among the managers, scientists, students, administrators, tribal representatives, and others who attend the conference with the goal of enhancing the use of the best available science to manage the region’s incomparable natural and cultural resources. The publication and dissemination of a conference proceedings series expands the reach of the conference beyond those people in attendance and creates a record on the research presented. The idea of producing a conference proceedings, and its subsequent publication, first occurred in 1993 following the first biennial conference in 1991. A published volume of contributed papers has followed each subsequent biennial conference, including this volume. The venue for publishing proceedings has changed over the years and has included the National Park Service, the Government Printing Office, the U.S. Geological Survey, and University of Arizona Press. Recently, van Riper and others (2015) published a compilation of the abstracts from the 11 previous conference proceedings. Collectively, the proceedings highlight approximately 25 years of natural- and cultural-resources research, promoting the integration of research with resource management across the Colorado Plateau. This volume is freely downloadable by the public, thereby further expanding the influence of this conference beyond the Colorado Plateau. The 12th Biennial Conference held in Flagstaff, Arizona, from September 16 to 19, 2013, covered a range of topics in the physical, biological, and socio-cultural sciences. The conference was organized and hosted by Northern Arizona University’s ( NAU) Merriam-Powell Center for Environmental Research, the Colorado Plateau Cooperative Ecosystem Studies Unit, and the U.S. Geological Survey Southwest Biological Science Center. Financial and in-kind support was provided by a wide range of organizations including the U.S. Forest Service, National Park Service, Bureau of Land Management, Grand Canyon Trust, Colorado Plateau Research Station, and various NAU entities. NAU sponsors include the Landscape Conservation Initiative, School of Forestry, School of Earth Science and Environmental Sustainability, Office of the Provost, and Office of the Vice President of Research. Contributors to these proceedings include researchers and managers from Federal, State, and Tribal governments, universities, private entities, and non-profit organizations. In this regard, this conference has wide-ranging support and participation among private and public entities involved in the science and management of natural resources on the Colorado Plateau.

Arizona, Colorado, New Mexico, Utah

Predicting effects of environmental change on a migratory herbivore

Changes in climate, food abundance and disturbance from humans threaten the ability of species to successfully use stopover sites and migrate between non‐breeding and breeding areas. To devise successful conservation strategies for migratory species we need to be able to predict how such changes will affect both individuals and populations. Such predictions should ideally be process‐based, focusing on the mechanisms through which changes alter individual physiological state and behavior. In this study we use a process‐based model to evaluate how Black Brant ( Branta bernicla nigricans ) foraging on common eelgrass ( Zostera marina ) at a stopover site (Humboldt Bay, USA), may be affected by changes in sea level, food abundance and disturbance. The model is individual‐based, with empirically based parameters, and incorporates the immigration of birds into the site, tidal changes in availability of eelgrass, seasonal and depth‐related changes in eelgrass biomass, foraging behavior and energetics of the birds, and their mass‐dependent decisions to emigrate. The model is validated by comparing predictions to observations across a range of system properties including the time birds spent foraging, probability of birds emigrating, mean stopover duration, peak bird numbers, rates of mass gain and distribution of birds within the site: all 11 predictions were within 35% of the observed value, and 8 within 20%. The model predicted that the eelgrass within the site could potentially support up to five times as many birds as currently use the site. Future predictions indicated that the rate of mass gain and mean stopover duration were relatively insensitive to sea level rise over the next 100 years, primarily because eelgrass habitat could redistribute shoreward into intertidal mudflats within the site to compensate for higher sea levels. In contrast, the rate of mass gain and mean stopover duration were sensitive to changes in total eelgrass biomass and the percentage of time for which birds were disturbed. We discuss the consequences of these predictions for Black Brant conservation. A wide range of migratory species responses are expected in response to environmental change. Process‐based models are potential tools to predict such responses and understand the mechanisms which underpin them.

California

Broadening the focus of bat conservation and research in the USA for the 21st century

Appropriately, bat conservation in the USA during the 20th century focused on species that tend to aggregate in large numbers and locations (e.g. maternity roosts, hibernacula) where populations are most vulnerable. Extensive research into habitat needs (primarily for roosting) of reproductive females during the previous 2 decades has produced a wealth of information useful for developing conservation strategies for this group in their summer roost areas. However, the ecological needs of males, non-reproductive females, and juveniles have received far less attention, as have the ecological needs of all bats outside the pup-rearing season. Hence, it is unlikely that a single paradigm could comprehensively address conservation needs of all demographic groups within a species because they may have different seasonal distributions, reproductive strategies, and thermoregulatory needs. Herein, we recommend research into a wider spectrum of demographic groups and seasons to form a more holistic vision of the conservation needs of bats. We urge greater attention to understanding thermo-energetic and reproductive underpinnings of observed patterns of seasonal distribution and habitat selection by bats in the USA. Such understanding is instrumental for development of scientifically sound conservation strategies to confront emerging threats to conservation of bats in the 21st century: climate change, disease, habitat degradation, and environmental contaminants. We discuss interconnections among these emerging threats and the fundamental need to incorporate understanding of thermo-energetic strategies of bats in development of conservation strategies or legislation to mitigate potential impacts on bat populations of the USA.

Endangered Species Research

Field and laboratory validation of new sampling gear to quantify coregonine egg deposition and larval emergence across spawning habitat gradients

The influence of habitat and environmental conditions on Great Lakes coregonine reproduction is not well described, in part, because we lack sampling gears for early life stages that are effective across habitats. We designed new egg and larval emergence traps to quantify coregonine reproductive success across variable depths and substrates and tested them in laboratory and field settings. In the laboratory, our new metal ring egg traps had greater egg retention (94–100%) and faster post-catch processing (5–7 min) relative to a commonly employed fiber mat trap (30–67% and 30–60 min). In Lake Ontario’s Chaumont Bay, egg densities for lake whitefish Coregonus clupeaformis (0–5,832 eggs m −2 ) and cisco Coregonus artedi (0–426,501 eggs m −2 ) measured with metal ring traps (n = 112) varied across habitats but were greatest between 2–5 m on rock and dreissenid mussel substrates. Emergence traps used an inverted cone, fine mesh, and a clear collection chamber to capture positively phototactic emerging larvae. In the laboratory, traps captured 69–80% of emerged larvae. In Chaumont Bay, emergence traps deployed for 21 days after ice out caught only cisco larvae. Emergence rates varied across habitats (0–118 larvae m −2 day −1 , n = 85) but were highest on dreissenid mussel reef substrate. Our samplers improved processing efficiency and facilitated large sample sizes to quantify variability in egg deposition densities and emergence rates across habitats. These methods can advance coregonine conservation by determining how anthropogenic changes to habitat and environmental conditions influence incubation success.

Journal of Great Lakes Research

Limits to benthic feeding by eiders in a vital Arctic migration corridor due to localized prey and changing sea ice

Four species of threatened or declining eider ducks that nest in the Arctic migrate through the northeast Chukchi Sea, where anticipated industrial development may require prioritizing areas for conservation. In this nearshore corridor (10–40 m depth), the eiders’ access to benthic prey during the spring is restricted to variable areas of open water within sea ice. For the most abundant species, the king eider ( Somateria spectabilis ), stable isotopes in blood cells, muscle, and potential prey indicate that these eiders ate mainly bivalves when traversing this corridor. Bivalves there were much smaller than the same taxa in deeper areas of the northern Bering Sea, possibly due to higher mortality rates caused by ice scour in shallow water; future decrease in seasonal duration of fast ice may increase this effect. Computer simulations suggested that if these eiders forage for >15 h/day, they can feed profitably at bivalve densities >200 m −2 regardless of water depth or availability of ice for resting. Sampling in 2010–2012 showed that large areas of profitable prey densities occurred only in certain locations throughout the migration corridor. Satellite data in April–May over 13 years (2001–2013) indicated that access to major feeding areas through sea ice in different segments of the corridor can vary from 0% to 100% between months and years. In a warming and increasingly variable climate, unpredictability of access may be enhanced by greater effects of shifting winds on unconsolidated ice. Our results indicate the importance of having a range of potential feeding areas throughout the migration corridor to ensure prey availability in all years. Spatial planning of nearshore industrial development in the Arctic, including commercial shipping, pipeline construction, and the risk of released oil, should consider these effects of high environmental variability on the adequacy of habitats targeted for conservation.

Alaska

Seasonal variation in environmental and behavioural drivers of annual-cycle habitat selection in a nearshore seabird

Aim Conservation of highly mobile species often requires identifying locations or time periods of elevated vulnerability. Since both extrinsic habitat conditions and intrinsic behavioural and energetic requirements contribute to habitat use at the landscape scale, identifying spatial or temporal foci for conservation intervention requires understanding how habitat needs and distributions vary across the annual cycle. Nearshore marine birds inhabit highly dynamic systems and have widely varying habitat needs among breeding, moult and non-breeding seasons, making them a useful case study for testing the relative contributions of individual resource requirements and environmental conditions in driving annual variation in distribution patterns. Location Northern Gulf of Mexico (USA). Methods We tracked Brown Pelicans using bird-borne GPS transmitters and used a combination of Hidden Markov Models and multivariate selectivity analysis to compare the characteristics of preferred resident habitats used throughout the annual cycle. Results Habitat selection was driven by dynamic oceanographic variables during all stages of the annual cycle. Key habitat characteristics varied between seasons, with particularly strong selection on high productivity, low temperature and low salinity during the breeding and post-breeding moult periods. The post-breeding moult also corresponded to a time of limited availability of preferred habitats, resulting in extensive overlap between breeding populations from different administrative planning areas. Main conclusions By incorporating seasonal variation in individual behaviour and resource requirements into our habitat models, we were able to identify the post-breeding moult as a period of high selectivity and restricted availability of preferred habitats for Brown Pelicans. Locations meeting preferred habitat criteria during the post-breeding period, particularly estuarine habitats with high productivity and low salinity, would therefore be high-value targets for management and restoration. Our analysis demonstrates the importance of accounting for both intrinsic and extrinsic temporal variation in evaluating habitat selection.

Alabama, Florida, Louisiana, Mississippi, Texas

Environmental and demographic mechanisms underlying population dynamics provide relative stability in an island songbird

Understanding demographic and ecological mechanisms underlying population dynamics is a key goal in population ecology and can inform effective conservation and management. Species may be well adapted to persist under normal ranges of environmental conditions, but increasingly novel conditions due to climate change may strain their demographic buffering mechanisms. Small isolated populations on islands are expected to be especially vulnerable to declines caused by novel environmental conditions, but the ecological drivers of population dynamics on islands are often unknown. We used an integrated population model to (1) examine ecological drivers of population growth and (2) assess global population trends of the Island Scrub-Jay ( Aphelocoma insularis ) from 2009 to 2019. Our results suggest that population size increased slightly over this interval despite declines during severe drought. We also found evidence that density dependence, precipitation, and food availability affected fecundity and the survival of nonbreeding individuals. Breeder survival was relatively stable and had a weak effect on population growth as expected for long-lived species. Overall, our results provide an optimistic snapshot for this species by demonstrating resilience to contemporary drought but also emphasize the species' potential vulnerability due to its small population size.

California

Conservation status of the American horseshoe crab, (Limulus polyphemus): A regional assessment

Horseshoe crabs have persisted for more than 200 million years, and fossil forms date to 450 million years ago. The American horseshoe crab ( Limulus polyphemus ), one of four extant horseshoe crab species, is found along the Atlantic coastline of North America ranging from Alabama to Maine, USA with another distinct population on the coasts of Campeche, Yucatán and Quintana Roo in the Yucatán Peninsula, México. Although the American horseshoe crab tolerates broad environmental conditions, exploitation and habitat loss threaten the species. We assessed the conservation status of the American horseshoe crab by comprehensively reviewing available scientific information on its range, life history, genetic structure, population trends and analyses, major threats, and conservation. We structured the status assessment by six genetically-informed regions and accounted for sub-regional differences in environmental conditions, threats, and management. The transnational regions are Gulf of Maine (USA), Mid-Atlantic (USA), Southeast (USA), Florida Atlantic (USA), Northeast Gulf of México (USA), and Yucatán Peninsula (México). Our conclusion is that the American horseshoe crab species is vulnerable to local extirpation and that the degree and extent of risk vary among and within the regions. The risk is elevated in the Gulf of Maine region due to limited and fragmented habitat. The populations of horseshoe crabs in the Mid-Atlantic region are stable in the Delaware Bay area, and regulatory controls are in place, but the risk is elevated in the New England area as evidenced by continuing declines understood to be caused by over-harvest. The populations of horseshoe crabs in the Southeast region are stable or increasing. The populations of horseshoe crabs in the Florida Atlantic region show mixed trends among areas, and continuing population reductions at the embayment level have poorly understood causes. Within the Northeast Gulf of Mexico, causes of population trends are poorly understood and currently there is no active management of horseshoe crabs. Horseshoe crabs within México have conservation protection based on limited and fragmented habitat and geographic isolation from other regions, but elevated risk applies to the horseshoe crabs in the Yucatán Peninsula region until sufficient data can confirm population stability. Future species status throughout its range will depend on the effectiveness of conservation to mitigate habitat loss and manage for sustainable harvest among and within regions.

Reviews in Fish Biology and Fisheries

Connectivity between lentic and lotic freshwater habitats identified as a conservation priority for coho salmon

Juvenile Pacific salmon exhibit diverse habitat use and migration strategies to navigate high environmental variability and predation risk during freshwater residency. Increasingly, urbanization and climate-driven hydrological alterations are affecting the availability and quality of aquatic habitats in salmon catchments. Thus, conservation of freshwater habitat integrity has emerged as an important challenge in supporting salmon life-history diversity as a buffer against continuing ecosystem changes. To inform catchment management for salmon, information on the distribution and movement dynamics of juvenile fish throughout the annual seasonal cycle is needed. A number of studies have assessed the ecology of juvenile coho salmon ( Oncorhynchus kisutch ) during summer and autumn seasons; catchment use by this species throughout the annual cycle is less well characterized, particularly in high-latitude systems. Here, n = 3,792 tagged juvenile coho salmon were tracked throughout two complete annual cycles to assess basin-wide distribution and movement behaviour of this species in a subarctic, ice-bearing catchment. Juvenile coho salmon in the Big Lake basin, Alaska, exhibited multiple habitat use and movement strategies across seasons; however, summer rearing in lotic mainstem environments followed by migration to lentic overwinter habitats was identified as a prominent behaviour, with two-thirds of tracked fish migrating en masse to concentrate in a small subset of upper catchment lakes for the winter. In contrast, the most significant tributary overwintering site (8% of tracked fish) occurred below a culvert and dam, blocking juvenile fish passage to a headwater lake, indicating that these fish may have been restricted from reaching preferred lentic overwinter habitats. These findings emphasize the importance of maintaining aquatic connectivity to lentic habitats as a conservation priority for coho salmon during freshwater residency.

Aquatic Conservation: Marine and Freshwater Ecosys

Drain tiles and groundwater resources: Understanding the relations

Executive Summary Drainage for agricultural production over the past 150 years has been an integral component of human-driven change to Minnesota’s rural landscapes. Benefits of drainage Historically, poorly drained soils across much of the State would often remain saturated or flooded after spring snowmelt, preventing timely farm operations such as tilling and planting crops (Arneman, 1963). Installation of agricultural drainage, both surface ditches and subsurface drainage, accelerated transport of water off farm fields and imparted producers higher crop yields (Beauchamp, 1987; Stoner and others, 1993). Agricultural drainage offered many other benefits such as preventing crop drown out, aerating the soil profile for improved plant growth, limiting surface runoff and soil erosion, and allowing farmers better access to croplands (Fausey and others, 1987). Without agricultural drainage on much of Minnesota’s croplands, it would have been difficult to realize high enough crop yields to remain economically viable. Environmental concerns While drainage of Minnesota croplands provided the benefits mentioned above, several environmental concerns result. These include wetland loss, degradation of downstream water quality, and reduced [potential for] recharge. Early agricultural drainage efforts (pre-20th century) led to the disappearance of much of Minnesota’s natural wetlands. Increased focus on preventing or mitigating wetland loss over the last 50 years has helped curtail further losses, even as agricultural drainage proceeds. Prior to establishment of Minnesota statehood, wetlands accounted for more than 10 million acres in Minnesota, including prairie wetlands, peatlands, and forest wetlands that comprised approximately 19 percent of the total land area (Palmer, 1915; King, 1980). In 2018, only half of Minnesota’s pre-settlement wetlands remain, mostly in parts of the State that have not experienced widespread drainage, such as northern Minnesota. Water-quality monitoring has shown that agricultural drainage, in particular the practice of subsurface drainage, provides a direct flow path for nutrient (nitrogen and soluble phosphorus) losses to surface water resources. The negative consequences of agricultural drainage on surface water quality are well documented (for example, Dinnes and others, 2002; Kladivko and others, 2004; Richards and others, 2008; Rozemeijer and others, 2010; Schottler and others, 2013). Agricultural basins with a high percentage of agricultural drainage have been implicated as part of the cause of the Gulf of Mexico hypoxia zone due to excessive nitrogen export (Goolsby and Battaglin, 2001; Randall and Mulla, 2001). The connection of hydrological effects of agricultural subsurface drainage on groundwater recharge and aquifers, on the other hand, has not been well-established. Agricultural subsurface drainage intercepts infiltrating water below croplands and directly discharges the water to nearby surface waters. However, the size of the water balance shift from drained water that would have evapotranspired or run off the land to drained water that would recharge underlying aquifers has been poorly characterized (Schuh, 2008). Drain Tiles and Groundwater Given the poor accounting of subsurface drainage effects on groundwater resources, the Minnesota Ground Water Association (MGWA) deemed it imperative that we document these effects so that groundwater resources in agricultural regions with substantial drainage can be effectively managed. This white paper documents the relations of drain tiles and groundwater resources and discusses the historical significance of agricultural drainage practices, the recognized positive benefits and potential negative consequences of agricultural drainage practices, and the gaps in understanding of the connections between agricultural drainage and groundwater resources. The major messages emerged from the findings of this white paper are: Complex history. Minnesota has a long history of agricultural drainage, spanning over 150 years. Agricultural drainage, and the eventual widespread usage of subsurface drainage, can be separated into at least four distinct periods of time: (a) early drainage to get water off the land, pre-20th century; (b) the boom and bust era (1900-1945); (c) postwar resurgence of subsurface drainage and early conservation efforts (1945-1960); and, (d) emergence of the environmental movement (1960 to present). The State’s regulatory framework that both allowed for drainage and controlled its usage during these periods is complicated and has been governed by a patchwork of both State and Federal statutes. Drainage Provinces. This white paper advances the concept of tile drainage provinces to aid in the discussion of regional differences in subsurface drainage and its overall effect on groundwater resources. Built upon the concept of groundwater provinces (Minnesota Department of Natural Resources, 2001), three distinct tile drainage provinces were conceptualized: (1) the Southeastern Province; (2) the SouthCentral Province; and, (3) the Western Province. The distinct geology and the soils that developed in these regions have implications for each region’s subsurface drainage density and the potential implications for groundwater. Knowledge gaps. Several critical knowledge gaps are identified in this paper, creating opportunities for further research to improve our understanding for better managed water resources: Extent of drainage is unknown. Direct estimates of the extent of subsurface drainage do not exist in Minnesota. However, several indirect methods have been utilized to estimate subsurface drainage, from the field-scale to countylevel through the use of geographic information system (GIS) analysis and aerial photography. Based on a 2012 U.S. Geological Survey estimate of subsurface drainage extent (Nakagaki and Wieczorek, 2016), about 21% of the land area in Minnesota has some density of subsurface drainage. Effect of drainage on underlying aquifers is unknown. A basic understanding of unconfined and confined aquifers and their recharge is necessary to connect any hydrological effects from agricultural drainage to groundwater. The basic goal of subsurface drainage to efficiently drain saturated soils clearly alters the water balance in croplands. However, its overall effect on groundwater resources has been poorly characterized, and is in large part determined by the geology below drained areas and the arrangement of underlying aquifers. Water balance shifts. An improved understanding of historical water balance shifts from pre- to post-drainage periods is necessary to understand long-term implications on net groundwater recharge. Also, more direct field-scale studies and indirect modeling studies are needed to characterize water budgets for fields with subsurface drainage.

Minnesota

Assessment of soil-gas contamination at building 310 underground storage tank area, Fort Gordon, Georgia, 2010-2011

Soil gas was assessed for contaminants in the building 310 underground storage tank area adjacent to the Dwight D. Eisenhower Army Medical Center at Ft. Gordon, Georgia, from October 2010 to September 2011. The assessment, which also included the detection of organic compounds in soil gas, provides environmental contamination data to Fort Gordon personnel pursuant to requirements of the Resource Conservation and Recovery Act Part B Hazardous Waste Permit process. The study was conducted by the U.S. Geological Survey, in cooperation with the U.S. Department of the Army Environmental and Natural Resources Management Office of the U.S. Army Signal Center and Fort Gordon. Soil-gas samplers were deployed below land surface at 37 locations in the building 310 underground storage tank area. Soil-gas samplers were deployed in a grid pattern near the storage tank area as well as downslope of the tank area in the direction of groundwater flow toward an unnamed tributary to Butler Creek. Total petroleum hydrocarbons were detected in 35 of the 37 soil-gas samplers at levels above the method detection level, and the combined mass of benzene, toluene, ethylbenzene, and total xylenes were detected above their detection levels in 8 of the 37 samplers. In addition, the combined masses of undecane, tridecane, and pentadecane were detected at or above their method detection levels in 9 of the 37 samplers. Other volatile organic compounds detected above their respective method detection levels were chloroform, 1,2,4-trimethylbenzene, and perchloroethylene. In addition, naphthalene, 2-methyl naphthalene, and 1,2,4-trimethylbenzene were detected below the method detection levels, but above the nondetection level.

Georgia

Soil reservoir dynamics of ophidiomyces ophidiicola, the causative agent of snake fungal disease

Wildlife diseases pose an ever-growing threat to global biodiversity. Understanding how wildlife pathogens are distributed in the environment and the ability of pathogens to form environmental reservoirs is critical to understanding and predicting disease dynamics within host populations. Snake fungal disease (SFD) is an emerging conservation threat to North American snake populations. The causative agent, Ophidiomyces ophidiicola (Oo), is detectable in environmentally derived soils. However, little is known about the distribution of Oo in the environment and the persistence and growth of Oo in soils. Here, we use quantitative PCR to detect Oo in soil samples collected from five snake dens. We compare the detection rates between soils collected from within underground snake hibernacula and associated, adjacent topsoil samples. Additionally, we used microcosm growth assays to assess the growth of Oo in soils and investigate whether the detection and growth of Oo are related to abiotic parameters and microbial communities of soil samples. We found that Oo is significantly more likely to be detected in hibernaculum soils compared to topsoils. We also found that Oo was capable of growth in sterile soil, but no growth occurred in soils with an active microbial community. A number of fungal genera were more abundant in soils that did not permit growth of Oo, versus those that did. Our results suggest that soils may display a high degree of both general and specific suppression of Oo in the environment. Harnessing environmental suppression presents opportunities to mitigate the impacts of SFD in wild snake populations.

Journal of Fungi

Turning trash into treasure: Leveraging discarded filters for national-scale aquatic eDNA biomonitoring

Monitoring biodiversity changes over large spatiotemporal scales is critical for effective ecosystem conservation and management. This study investigates the potential of environmental DNA (eDNA) metabarcoding to enhance national-scale biomonitoring of freshwater diversity by leveraging discarded filters associated with routine water quality sampling from the U.S. Geological Survey's (USGS) National Water Quality Network (NWQN). We tested 375 samples from 103 NWQN sites for eDNA of native and non-native fish and found that 52% of the filters yielded fish eDNA for a total of 70 fish species detections. Of the filters that had fish eDNA present, an average of 3.7 species were detected. Benchmarking these results to USGS's Aquatic Gap Analysis Project (AGAP)—which includes both field-verified observations along with predictive models derived from fish capture and landscape predictor datasets—we found that eDNA from these filters detected only a fraction of the observed and expected fish diversity for these sites. Our results indicate that these discarded filters may not be sufficient for eDNA sampling of fish communities and posit that alternative filter types more appropriate for eDNA sampling may yield more valuable biomonitoring data. Nevertheless, we tested the efficacy of two novel approaches to facilitate large-scale biomonitoring. Though these filters did not yield adequate fish eDNA, the AGAP database provides a useful method for ground truthing fish species presence. The potential of integrating eDNA sampling into existing monitoring frameworks, which, when paired with more optimal eDNA methods, could be a cost-effective strategy to enhance biodiversity monitoring at large scales.

Aquaculture, Fish and Fisheries

Intact landscape promotes gene flow and low genetic structuring in the threatened Eastern Massasauga Rattlesnake

Genetic structuring of wild populations is dependent on environmental, ecological, and life-history factors. The specific role environmental context plays in genetic structuring is important to conservation practitioners working with rare species across areas with varying degrees of fragmentation. We investigated fine-scale genetic patterns of the federally threatened Eastern Massasauga Rattlesnake ( Sistrurus catenatus ) on a relatively undisturbed island in northern Michigan, USA. This species often persists in habitat islands throughout much of its distribution due to extensive habitat loss and distance-limited dispersal. We found that the entire island population exhibited weak genetic structuring with spatially segregated variation in effective migration and genetic diversity. The low level of genetic structuring contrasts with previous studies in the southern part of the species’ range at comparable fine scales (~7 km), in which much higher levels of structuring were documented. The island population's genetic structuring more closely resembles that of populations from Ontario, Canada, that occupy similarly intact habitats. Intrapopulation variation in effective migration and genetic diversity likely corresponds to the presence of large inland lakes acting as barriers and more human activity in the southern portion of the island. The observed genetic structuring in this intact landscape suggests that the Eastern Massasauga is capable of sufficient interpatch movements to reduce overall genetic structuring and colonize new habitats. Landscape mosaics with multiple habitat patches and localized barriers (e.g., large water bodies or roads) will promote gene flow and natural colonization for this declining species.

Michigan