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Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

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At least 415 records · Page 23Linked to original sources
USGS2017

Field-scale observations of a transient geobattery resulting from natural attenuation of a crude oil spill

We present evidence of a geobattery associated with microbial degradation of a mature crude oil spill. Self-potential measurements were collected using a vertical array of nonpolarizing electrodes, starting at the land surface and passing through the smear zone where seasonal water table fluctuations have resulted in the coating of hydrocarbons on the aquifer solids. These passive electrical potential measurements exhibit a dipolar pattern associated with a current source. The anodic and cathodic reactions of this natural battery occur below and above the smear zone, respectively. The smear zone is characterized by high magnetic susceptibility values associated with the precipitation of semiconductive magnetic iron phase minerals as a by-product of biodegradation, facilitating electron transfer between the anode and the cathode. This geobattery response appears to have a transient nature, changing on a monthly scale, probably resulting from chemical and physical changes in subsurface conditions such as water table fluctuations.

Journal of Geophysical Research G: Biogeosciences↗
USGS2017

Conversion of wet glass to melt at lower seismogenic zone conditions: Implications for pseudotachylyte creep

Coseismic frictional melting and the production of quenched glass called pseudotachylyte is a recurring process during earthquakes. To investigate how glassy materials affect the postseismic strength and stability of faults, obsidian gouges were sheared under dry and wet conditions from 200°C to 300°C at ~150 MPa effective normal stress. Dry glass exhibited a brittle rheology at all conditions tested, exhibiting friction values and microstructures consistent with siliciclastic materials. Likewise, wet glass at 200°C exhibited a brittle rheology. In contrast, wet gouges at 300°C transitioned from brittle sliding to linear‐viscous (Newtonian) flow at strain rates <3 × 10 −4 s −1 , indicating melt‐like behavior. The viscosity ranged from 2 × 10 11 to 7.8 × 10 11 Pa‐s. Microstructures show that viscous gouges were fully welded with rod‐shaped microlites rotated into the flow direction. Fourier transform infrared spectroscopy along with electron backscatter imaging demonstrate that hydration of the glass by diffusion of pore water was the dominant process reducing the viscosity and promoting viscous flow. As much as 5 wt % water diffused into the glass. These results may provide insight into postseismic‐slip behaviors and challenge some interpretations of fault kinematics based on studies assuming that pseudotachylyte formation and flow is solely coseismic.

Geophysical Research Letters↗
USGS2017

A 15-year catalog of more than 1 million low-frequency earthquakes: Tracking tremor and slip along the deep San Andreas Fault

Low-frequency earthquakes (LFEs) are small, rapidly recurring slip events that occur on the deep extensions of some major faults. Their collective activation is often observed as a semi-continuous signal known as tectonic (or non-volcanic) tremor. This manuscript presents a catalog of more than 1 million LFEs detected along the central San Andreas Fault from 2001-2016. These events have been detected via a multi-channel matched-filter search, cross-correlating waveform templates representing 88 different LFE families with continuous seismic data. Together, these source locations span nearly 150 km along the central San Andreas Fault, ranging in depth from ~16-30 km. This accumulating catalog has been the source of numerous studies examining the behavior of these LFE sources and the inferred slip behavior of the deep fault. The relatively high temporal and spatial resolution of the catalog has provided new insights into properties such as tremor migration, recurrence, and triggering by static and dynamic stress perturbations. Collectively, these characteristics are inferred to reflect a very weak fault likely under near-lithostatic fluid pressure, yet the physical processes controlling the stuttering rupture observed as tremor and LFE signals remain poorly understood. This paper aims to document the LFE catalog assembly process and associated caveats, while also updating earlier observations and inferred physical constraints. The catalog itself accompanies this manuscript as part of the electronic supplement, with the goal of providing a useful resource for continued future investigations.

California↗
USGS2006

Mass spectrometric in the analysis of inorganic substances

Mass spectrometry is an analytical technique used to measure the composition of a substance by isolating specific analyte components according to their individual atomic or molecular mass‐to‐charge ratios. Inorganic mass spectrometry is specifically used to determine the elemental and isotopic composition of the material being analyzed. The techniques are capable of the measurement of a range of concentrations from major components to ultratrace constituents. Several instrumental approaches are used to separate and measure the abundance of component ions formed from the sample. These techniques include electron ionization mass spectrometry (EIMS), inductively coupled plasma mass spectrometry (ICPMS), thermal ionization mass spectrometry (TIMS) and spark source mass spectrometry (SSMS). These techniques utilize a variety of mass spectrometers including ion trap, quadrupole, magnetic sector and time‐of‐flight mass analyzers, depending on the type of sample being analyzed and the desired quality of the results. Often sample introduction techniques can be utilized to enhance the capabilities for solving specific analytical chemistry problems.

Book chapter↗
USGS2015

Quantifying water flow and retention in an unsaturated fracture-facial domain

Hydrologically significant flow and storage of water occur in macropores and fractures that are only partially filled. To accommodate such processes in flow models, we propose a three-domain framework. Two of the domains correspond to water flow and water storage in a fracture-facial region, in addition to the third domain of matrix water. The fracture-facial region, typically within a fraction of a millimeter of the fracture wall, includes a flowing phase whose fullness is determined by the availability and flux of preferentially flowing water, and a static storage portion whose fullness is determined by the local matric potential. The flow domain can be modeled with the source-responsive preferential flow model, and the roughness-storage domain can be modeled with capillary relations applied on the fracture-facial area. The matrix domain is treated using traditional unsaturated flow theory. We tested the model with application to the hydrology of the Chalk formation in southern England, coherently linking hydrologic information including recharge estimates, streamflow, water table fluctuation, imaging by electron microscopy, and surface roughness. The quantitative consistency of the three-domain matrix-microcavity-film model with this body of diverse data supports the hypothesized distinctions and active mechanisms of the three domains and establishes the usefulness of this framework.

Book chapter↗
USGS2023

Evidence for infection influencing survival of the freshwater copepod Salmincola californiensis, a parasite of Pacific salmon and trout

Objective We explore apparent infection of Salmincola californiensis arising during investigations involving this lernaeopodid copepod parasitic on Pacific salmon and trout Oncorhynchus spp. Methods We noted occasional unusual coloration of adult female copepods collected from the wild. These females were bright blue and pink in contrast to the cream white coloration characteristic of the copepod. We also observed that similar color patterns developed under laboratory settings when copepod eggs were held for hatching. In paired egg cases, we found consistent hatching failure of blue and pink eggs and patterns in apparent disease development that would be consistent with both vertical and horizontal transmission. Result Attempts to identify the cause of the apparent infection using genetic methods and transmission electron microscopy were inconclusive. Conclusion Iridovirus infection was initially suspected, but bacterial infection is also plausible. This apparent reduced hatching success of S. californiensis warrants further exploration as it could reduce local abundances. Given the potential importance of a disease impacting this copepod, a parasite that itself affects endangered and commercially important Pacific salmon and trout, future research would benefit from clarification of the apparent infection through additional sequencing, primer development, visualization, and exploration into specificity and transmission.

Journal of Aquatic Animal Health↗
USGS2012

Toxicity of carbon nanotubes to freshwater aquatic invertebrates

Carbon nanotubes (CNTs) are hydrophobic in nature and thus tend to accumulate in sediments if released into aquatic environments. As part of our overall effort to examine the toxicity of carbon-based nanomaterials to sediment-dwelling invertebrates, we have evaluated the toxicity of different types of CNTs in 14-d water-only exposures to an amphipod ( Hyalella azteca ), a midge ( Chironomus dilutus ), an oligochaete ( Lumbriculus variegatus ), and a mussel ( Villosa iris ) in advance of conducting whole-sediment toxicity tests with CNTs. The results of these toxicity tests conducted with CNTs added to water showed that 1.00g/L (dry wt) of commercial sources of CNTs significantly reduced the survival or growth of the invertebrates. Toxicity was influenced by the type and source of the CNTs, by whether the materials were precleaned by acid, by whether sonication was used to disperse the materials, and by species of the test organisms. Light and electron microscope imaging of the surviving test organisms showed the presence of CNTs in the gut as well as on the outer surface of the test organisms, although no evidence was observed to show penetration of CNTs through cell membranes. The present study demonstrated that both the metals solubilized from CNTs such as nickel and the "metal-free" CNTs contributed to the toxicity.

Environmental Toxicology and Chemistry↗
USGS1989

Analysis of trifluralin, methyl paraoxon, methyl parathion, fenvalerate and 2,4-D dimethylamine in pond water using solid-phase extraction

A method was developed for the simultaneous extraction of trifluralin, methyl paraoxon, methyl parathion, fenvalerate, and 2,4-D dimethylamine salt in pond water using a solid-phase C 18 column. After elution from the C 18 column, the eluate was analyzed on a capillary gas Chromatograph equipped with an electron-capture or flame photometric detector.

Environmental Toxicology and Chemistry↗
USGS1990

Comparison of breaking strength and shell thickness as evaluators of white-faced ibis eggshell quality

Data from a 1986 field study of white-faced ibis ( Plegadis chihi ) nesting at Carson Lake, Nevada, were used to compare the utility of eggshell strength measurement and eggshell thickness as indicators of eggshell quality. The ibis population had a history of reproductive failure correlated with elevated egg concentrations of p, p '-DDE, hereafter referred to as DDE. Eggs from 80 nests (one egg/nest) were tested for shell strength and thickness. Egg contents were analyzed for organochlorines, mercury and selenium; productivity at each nest (minus one egg) was monitored in the field. DDE-DDT concentrations in the eggs ranged from none detected (<0.1) to 29 ppm (wet weight). Shell thickness and shell strength were both negatively correlated with DDE (−0.60, −0.61, respectively), but shell strength deteriorated at a faster rate than shell thickness. Scanning electron micrographs indicated the deterioration in strength was related to changes in ultrastructure as well as to decreased thickness. Fourteen eggs with <0.40 ppm DDE were used to exemplify normal “control” eggs. Of the eggs with higher concentrations of DDE (i.e., ≥0.40 ppm), 11 of 66 were thinner (>2 SD below “control” mean) than normal, 11 of 59 were weaker than normal and 7 eggs were cracked so their strength could not be tested, although thickness was measured. Therefore, 17% of the eggs with ≥0.40 ppm DDE were thinner than normal and 27% were either weaker than normal or cracked. Further, six eggs (four with ≥15 ppm DDE) did not have abnormally thin shells, but did have abnormally weak shells. Nests with abnormal test eggs (thinner, weaker or cracked) produced fewer young than nests with normal eggs. Use of the shell strength parameter provides additional information for better evaluations of reproductive problems. The potential utility of monitoring eggshell quality goes beyond evaluating effects of organochlorines since recent work indicates that other environmental hazards can affect shell quality.

Environmental Toxicology and Chemistry↗
USGS2011

Microanatomy of passerine hard-cornified tissues: Beak and claw structure of the black-capped chickadee (Poecile atricapillus)

The microanatomy of healthy beaks and claws in passerine birds has not been well described in the literature, despite the importance of these structures in avian life. Histological processing of hard‐cornified tissues is notoriously challenging and only a few reports on effective techniques have been published. An emerging epizootic of beak deformities among wild birds in Alaska and the Pacific Northwest region of North America recently highlighted the need for additional baseline information about avian hard‐cornified structures. In this study, we examine the beak and claw of the Black‐capped Chickadee ( Poecile atricapillus ), a common North American passerine that is affected by what has been described as “avian keratin disorder.” We use light and scanning electron microscopy and high‐magnification radiography to document the healthy microanatomy of these tissues and identify features of functional importance. We also describe detailed methods for histological processing of avian hard‐cornified structures and discuss the utility of special stains. Results from this study will assist in future research on the functional anatomy and pathology of hard‐cornified structures and will provide a necessary reference for ongoing investigations of avian keratin disorder in Black‐capped Chickadees and other wild passerine species.

Journal of Morphology↗
USGS2019

Machine learning classifiers for attributing tephra to source volcanoes: An evaluation of methods for Alaska tephras

Glass composition-based correlations of volcanic ash (tephra) traditionally rely on extensive manual plotting. Many previous statistical methods for testing correlations are limited by using geochemical means, masking diagnostic variability. We suggest that machine learning classifiers can expedite correlation, quickly narrowing the list of likely candidates using well-trained models. Eruptives from Alaska's Aleutian Arc-Alaska Peninsula and Wrangell volcanic field were used as a test environment for 11 supervised classification algorithms, trained on nearly 2000 electron probe microanalysis measurements of glass major oxides, representing 10 volcanic sources. Artificial neural networks and random forests were consistently among the top-performing learners (accuracy and kappa > 0.96). Their combination as an average ensemble effectively improves their performance. Using this combined model on tephras from Eklutna Lake, south-central Alaska, showed that predictions match traditional methods and can speed correlation. Although classifiers are useful tools, they should aid expert analysis, not replace it. The Eklutna Lake tephras are mostly from Redoubt Volcano. Besides tephras from known Holocene-active sources, Holocene tephra geochemically consistent with Pleistocene Emmons Lake Volcanic Center (Dawson tephra), but from a yet unknown source, is evident. These tephras are mostly anchored by a highly resolved varved chronology and represent new important regional stratigraphic markers.

Journal of Quaternary Science↗
USGS2020

Bidirectional connectivity via fish ladders in a large Neotropical river: Response to a comment

In a recent article, we described fitting electronic tags to the fish Prochilodus lineatus to document how a fishway connected aquatic habitats downstream and upstream of a major dam. Moreover, given that tagged fish remained upstream or downstream for periods extending months and years before returning to the fishway, and that observed patterns of passage were consistent with seasonal migratory cycles, and building on existing literature, we speculated that the fishway allows fish access to spawning habitats upstream and feeding habitats downstream. Our interpretation of the movement data resulted in several comments from Pelicice, Pompeu, and Agostinho (2020) and they outline various reasons by which, in their opinion, some of our conclusions may be mistaken. Their critique is threefold. First, they argue that the percentage of fish attracted into the fishway is too low to consider the fishway an effective link between the reservoir and the river downstream. We contend that without estimates of population size it is impossible to judge if 28% passage is “limited”; conceivably, the absolute number of fish passed may still be enough to maintain a viable population. Second, they assert that because receivers were located only in the fishway it is unknown if fish that used the fishway remained near the dam, or if they continued their migration. We counter with a brief literature review that documents P. lineatus migrating through reservoirs and spawning in tributaries. Third, they advocate for a broader conservation perspective and for additional research. We agree and, in the article, had already expressed this view that fishways are only a temporary fix and that we support their use only as an element of a broader environmental management package. We also agree with the need for more research but argue that procrastinating on conservation action may not be wise because we do not know if the research will be done, how long it will take, or what the cost may be of waiting.

Parana River↗
USGS2024

Developing a predictive model to identify Sea Lamprey parasitism on Lake Trout using biologgers

Objective Sea Lamprey Petromyzon marinus remain problematic for Lake Trout Salvelinus namaycush restoration in the Laurentian Great Lakes. Fisheries assessments would benefit from knowledge of spatial–temporal patterns of Sea Lamprey parasitism on Lake Trout; however, such patterns are challenging to estimate from wounding rates on caught Lake Trout. Electronic tags have been used to identify distinct fish behaviors (e.g., foraging or spawning) using measurements of acceleration or heart rate. We hypothesized that Sea Lamprey attachment would elicit changes in the heart rate and swimming behavior of Lake Trout. Here, we determined whether tagging devices could record these changes and whether we could accurately predict lamprey attachment on Lake Trout using these recordings. Methods Adult Lake Trout (n = 34) were implanted with acceleration and heart rate tags and then were subjected to Sea Lamprey parasitism within a laboratory setting. Approximately 70 different acceleration and heart rate metrics were collected and tried as predictors of lamprey attachment. The top variables were used to train random forest models and then tried on test data sets. The accuracy of these models was then validated using a jackknife approach. Result Metrics related to body orientation and heart rate were identified as the best predictors of Sea Lamprey attachment. The best models predicted lamprey attachments with high accuracy; however, individual‐level jackknife tests resulted in less accurate cross‐individual prediction and regularly predicted false negatives. These findings may be related to individual variance in the Lake Trout response to attachment, but there was evidence that the shifting of tags after implantation impacted predictive performance, which could be remedied with adjustments during implantation. Conclusions Our study highlights the potential to use tagging devices for quantifying Sea Lamprey attachments on Lake Trout in the wild. Further development appears necessary; however, once improved, these predictive models have the potential to generate field‐based estimates of Sea Lamprey attack rates on Lake Trout.

Transactions of American Fisheries Society↗
USGS2013

Impacts of an ethanol-blended fuel release on groundwater and fate of produced methane: simulation of field observations

In a field experiment at Vandenberg Air Force Base (VAFB) designed to mimic the impact of a small-volume release of E10 (10% ethanol and 90% conventional gasoline), two plumes were created by injecting extracted groundwater spiked with benzene, toluene, and o-xylene, abbreviated BToX (No-Ethanol Lane) and BToX plus ethanol (With-Ethanol Lane) for 283 days. We developed a reactive transport model to understand processes controlling the fate of ethanol and BToX. The model was calibrated to the extensive field dataset and accounted for concentrations of sulfate, iron, acetate, and methane along with iron-reducing bacteria, sulfate-reducing bacteria, fermentative bacteria, and methanogenic archaea. The benzene plume was about 4.5 times longer in the With-Ethanol Lane than in the No-Ethanol Lane. Matching this different behavior in the two lanes required inhibiting benzene degradation in the presence of ethanol. Inclusion of iron reduction with negligible growth of iron-reducers was required to reproduce the observed constant degradation rate of benzene. Modeling suggested that vertical dispersion and diffusion of sulfate from an adjacent aquitard were important sources of sulfate in the aquifer. Matching of methane data required incorporating initial fermentation of ethanol to acetate, methane loss by outgassing, and methane oxidation coupled to sulfate and iron reduction. Simulation of microbial growth using dual Monod kinetics, and including inhibition by more favorable electron acceptors, generally resulted in reasonable yields for microbial growth of 0.01-0.05.

California↗
USGS2020

Understanding sportsperson retention and reactivation through license purchasing behavior

Most state and provincial fish and wildlife agencies have access to important information about patterns in sportsperson participation through their license databases. Using transaction data from Nebraska Game and Parks Commission's electronic hunting and fishing license system, we tracked license purchases of Nebraska, USA, resident license holders in 2010 through 2017. We categorized sportspersons by gender and yearly purchases as hunting only (Hunter), fishing only (Angler), a combination of hunting and fishing (Hunter–Angler), or no purchases (Inactive). The probability of movement among active sportsperson groups was limited and varied little based on initial group participation. The Angler group had the greatest probability of an individual transitioning to the Inactive group (females = 0.39; males = 0.33). The Hunter–Angler group had the greatest probability of an individual remaining within the same group (females = 0.65; males = 0.76). There was a relatively low probability of an individual in the Hunter group moving to the Angler group and vice versa (≤0.02). The sportsperson population is dynamic and understanding patterns of sportsperson participation is important for the future of fish and wildlife management in North America. Using data readily available to most fish and wildlife agencies has the potential to significantly improve our understanding of hunter and angler participation and aid management agencies and conservation organizations in the development of more effective strategies for managing sportspersons. © 2020 The Wildlife Society.

Wildlife Society Bulletin↗
USGS2024

Developing a photography-based harvest survey to estimate age and subspecies composition of midcontinent sandhill cranes

Midcontinent sandhill cranes ( Antigone canadensis ) are managed as a single population, but hunting regulations are structured so harvest is targeted towards the more numerous lesser sandhill cranes ( A. c. canadensis ). However, research indicates that greater sandhill cranes ( A. c. tabida ) have been disproportionally exposed to harvest at a rate exceeding their proportion within the midcontinent population. In addition, harvest has increased 22% per year in the U.S. Central Flyway states. The midcontinent population appears to be growing in recent years, but variability in annual abundance estimates has increased substantially. With limited resources and harvest management uncertainty increasing, we developed methods for a citizen science, photography-based harvest survey to estimate age and subspecies composition of harvested midcontinent sandhill cranes. To develop survey methods, we collected physical parts from 284 sandhill cranes in North Dakota in 2019 and 2020. We manually measured the culmen and tarsus using calipers, and digitally measured these parts using photographs and computer software. All digitally derived measurements were 2.5% to 5.9% larger than manual measurements; therefore, we developed linear models that adjusted digital measurements, facilitating subspecies prediction using an existing morphometric-based technique. In 2021, we requested an equal number of hunters to participate using 2 data collection methods to test if hunters could reliably take photographs suitable for digital measurement. Collection method 1 involved photographing the head and leg simultaneously, and Collection method 2 involved photographing the head only. Hunters submitted a total of 239 photographs. Only 80 of these photographs were submitted using Collection method 1, and 72% were suitable for digital measurement. Conversely, hunters submitted twice as many photographs using Collection method 2, and 88% of these photographs were deemed suitable. Although obtaining the tarsus measurement slightly improved subspecies predictability, Collection method 2 increased participation and usable data. We believe our results could be used to develop an operational survey of age and subspecies composition of midcontinent sandhill cranes, wherein a sample of crane hunters throughout the midcontinent population range would be asked to electronically submit a photograph of the head of each bird they harvest. A time series of age and subspecies composition of this population would provide managers with valuable information and improve harvest management at minimal additional cost and burden, compared to a traditional parts collection survey administered by mail.

Wildlife Society Bulletin↗
USGS1999

Potassium-calcium decay system

Potassium has three isotopes (see Potassium ); potassium-40 ( 40 K) is radioactive and decays to both calcium-40 ( 40 Ca) and argon-40 ( 40 Ar). The combined half-life of 40 K is 1.25 billion years. The branched decay scheme of 40 K is shown in Figure P33 . It decays by β- decay to 40 Ca and to 40 Ar by both electron capture and positron decay (see Potassium-argon decay system ). Although 89.52% of the decays produce 40 Ca, the system is of somewhat limited use due to the large natural abundance of 40 Ca (96.9% of calcium, see Calcium ).

Book chapter↗
USGS2022

Biofilms in the Critical Zone: Distribution and mediation of processes

Microbial biofilms occur in all levels of the Critical Zone (CZ); they are on and in the vegetation, throughout the soil-saprolite zone, and along fractures in deep subsurface. Here we discuss biofilms in each level of the CZ with a focus in the soil-saprolite continuum. We show how scanning electron microscope (SEM) images provide an appropriate scale to explore microbe mineral interactions in the CZ and can be used without extensive sample preparation. Through SEM imaging, we show that biofilms weather primary minerals, that macropores and fractures are hotspots of biofilm development, that biologic precipitation of short-range-order minerals (SROs) occurs in biofilms, and that biofilms are important in the process of organic matter stabilization.

Book chapter↗