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Phylogenetic analysis of dissimilatory Fe(III)-reducing bacteria

Evolutionary relationships among strictly anaerobic dissimilatory Fe(III)-reducing bacteria obtained from a diversity of sedimentary environments were examined by phylogenetic analysis of 16S rRNA gene sequences. Members of the genera Geobacter, Desulfuromonas, Pelobacter, and Desulfuromusa formed a monophyletic group within the delta subdivision of the class Proteobacteria. On the basis of their common ancestry and the shared ability to reduce Fe(III) and/or S0, we propose that this group be considered a single family, Geobacteraceae. Bootstrap analysis, characteristic nucleotides, and higher-order secondary structures support the division of Geobacteraceae into two subgroups, designated the Geobacter and Desulfuromonas clusters. The genus Desulfuromusa and Pelobacter acidigallici make up a distinct branch within the Desulfuromonas cluster. Several members of the family Geobacteraceae, none of which reduce sulfate, were found to contain the target sequences of probes that have been previously used to define the distribution of sulfate-reducing bacteria and sulfate-reducing bacterium-like microorganisms. The recent isolations of Fe(III)-reducing microorganisms distributed throughout the domain Bacteria suggest that development of 16S rRNA probes that would specifically target all Fe(III) reducers may not be feasible. However, all of the evidence suggests that if a 16S rRNA sequence falls within the family Geobacteraceae, then the organism has the capacity for Fe(III) reduction. The suggestion, based on geological evidence, that Fe(III) reduction was the first globally significant process for oxidizing organic matter back to carbon dioxide is consistent with the finding that acetate-oxidizing Fe(III) reducers are phylogenetically diverse.

Journal of Bacteriology↗

Acetylene-fueled trichloroethene reductive dechlorination in a groundwater enrichment culture

In aquifers, acetylene (C 2 H 2 ) is a product of abiotic degradation of trichloroethene (TCE) catalyzed by in situ minerals. C 2 H 2 can, in turn, inhibit multiple microbial processes including TCE dechlorination and metabolisms that commonly support dechlorination, in addition to supporting the growth of acetylenotrophic microorganisms. Previously, C 2 H 2 was shown to support TCE reductive dechlorination in synthetic, laboratory-constructed cocultures containing the acetylenotroph Pelobacter sp. strain SFB93 and Dehalococcoides mccartyi strain 195 or strain BAV1. In this study, we demonstrate TCE and perchloroethene (PCE) reductive dechlorination by a microbial community enriched from contaminated groundwater and amended with C 2 H 2 as the sole electron donor and organic carbon source. The metagenome of the stable, enriched community was analyzed to elucidate putative community functions. A novel anaerobic acetylenotroph in the phylum Actinobacteria was identified using metagenomic analysis. These results demonstrate that the coupling of acetylenotrophy and reductive dechlorination can occur in the environment with native bacteria and broaden our understanding of biotransformation at contaminated sites containing both TCE and C 2 H 2 .

mBio↗

Tropical lakes, copropel, and oil shale

During a long-continued study of the lacustrine beds of the Eocene Green River Formation, I have tried to interpret past events from observation of present-day processes. After a search of some 40 years, four lakes have been found that are producing a kind of organic ooze judged to be a modern analogue of the precursors of rich oil shale. Two of the lakes are in central Africa and two are in Florida. All four are shallow. The ooze in all four is predominantly algal, entirely in the form of minute fecal pellets, and does not decay in warm, wet, oxidizing environments. Several of the most unusual, mummified microorganisms found in the oil shale of the Green River are illustrated as testament to the inference that the Eocene organic oozes also were resistant to decay. Studies to determine why these algal oozes do not decay are in progress, but as yet no satisfactory explanation is available. The ooze from Mud Lake, Florida, contains very few living bacteria but a great many bacterial spores, suggesting some active inhibitor. Gentle and slow anaerobic decay takes place in the ooze 1 foot or more below the mud-water interface. The algal ooze accumulates slowly. That at a depth of 3 feet below the mud-water interface has a C 14 age of 2280 ± 200 years. If compacted, this 3-foot layer would amount to a layer only about 0.5 inch thick. The air-dried algal mud (from Mud Lake) looks much like oil shale and has a C-H ratio essentially like that of the organic matter in oil shale. The oxygen of the mud, however, is roughly 5 times as high as in oil shale. The calorific value of dried Mud Lake algal ooze is about 6600 cal/g, whereas the organic matter from Green River oil shale averages about 9500 cal/g. Analyses show that the dried algal ooze from Mud Lake contains small quantities of higher fatty acids (C 12 –C 34 ), with C 16 being dominant. It also contains some unsaturated fatty acids and about 0.3 per cent of n-alkanes, predominantly odd carbons, with C 29 being dominant. A few qualitative analyses show that carotenoid pigments and terpenes are also present. A possible source of hydrocarbons is the long branched side chain of the chlorophyll molecule. Small crustaceans liberate this in the form of phytol, which, by dehydration, can go over into a series of saturated and unsaturated hydrocarbons, including phytanc and pristane, both of which are common in Green River oil shale. Search for other precursors of hydrocarbons continues.

GSA Bulletin↗

Upper Devonian biostratigraphy of Michigan Basin

The Late Devonian Michigan Basin was floored by the Middle and Upper Devonian Squaw Bay Limestone, which was deposited during the downwarping that produced the basin within a former Middle Devonian carbonate platform. The Squaw Bay comprises three beds, each having a different conodont fauna. The two upper beds, deposited during the transitans Zone, have different conodont biofacies that reflect this deepening. The basin was largely filled by the deep-water, anaerobic to dysaerobic, organic-rich, black Antrim Shale, which has a facies relationship with the prodeltaic, greenish gray Ellsworth Shale that prograded into the basin from the west. The Upper Devonian (Frasnian to Famennian) Antrim Shale is divided into four members, from base to top: the Norwood, Paxton, Lachine, and upper members. These members are more or less precisely dated by conodonts. The Norwood was deposited during the transitans Zone to Ancyrognathus triangularis Zone, and the Paxton was deposited from that zone probably through the linguiformis Zone at the end of the Frasnian. The overlying Lachine was deposited during the early Famennian and has yielded faunas of the Upper crepida and Lower rhomboidea Zones. Only the lower part of the upper member is exposed, and near Norwood, Michigan, it yielded conodonts of the Lower marginifera Zone. The widespread Famennian floating plant Protosalvinia (Foerstia) has not yet been found in outcrops of the Antrim, and should not be expected to occur except in the upper member or highest part of the Lachine Member. Its range in terms of conodont zones is from the Upper trachytera Zone through the Lower expansa Zone and possibly into the Middle expansa Zone. One known subsurface occurrence might be datable as rhomboidea or Lower marginifera Zone, depending on gamma ray correlations to outcrops. Black shale deposition ended when the Late Devonian mud delta of the Bedford Shale prograded across the Michigan Basin from the east and then retreated as the regressive Berea Sandstone was being deposited during the major eustatic sea-level fall that ended the Devonian. The Bedford was deposited during the Upper expansa to Lower praesulcata Zones, and the Berea was deposited during the Middle to Upper praesulcata Zones. Both formations contain the spore Retispora lepidophyta, which is a global indicator of latest Devonian age.

Michigan↗

Diving and foraging patterns of Marbled Murrelets (Brachyramphus marmoratus): Testing predictions from optimal-breathing models

The diving behavior of Marbled Murrelets (Brachyramphus marmoratus) was studied using telemetry along the Oregon coast during the 1995 and 1996 breeding seasons and examined in relation to predictions from optimal-breathing models. Duration of dives, pauses, dive bouts, time spent under water during dive bouts, and nondiving intervals between successive dive bouts were recorded. Most diving metrics differed between years but not with oceanographic conditions or shore type. There was no effect of water depth on mean dive time or percent time spent under water even though dive bouts occurred in depths from 3 to 36 m. There was a significant, positive relationship between mean dive time and mean pause time at the dive-bout scale each year. At the dive-cycle scale, there was a significant positive relationship between dive time and preceding pause time in each year and a significant positive relationship between dive time and ensuing pause time in 1996. Although it appears that aerobic diving was the norm, there appeared to be an increase in anaerobic diving in 1996. The diving performance of Marbled Murrelets in this study appeared to be affected by annual changes in environmental conditions and prey resources but did not consistently fit predictions from optimal-breathing models.

Canadian Journal of Zoology↗

Formation and distribution of coal balls in the Herrin Coal (Pennsylvanian), Franklin County, Illinois Basin, USA

Large areas of concentrated coal balls (permineralized peat) up to 4 m thick obstructed longwall mining in the Herrin Coal at the Old Ben No. 24 mine. The largest coal‐ball area mapped contained >1500 m 3 ; several areas contained >400 m 3 of coal balls. In‐mine mapping established that there were two types of roof (freshwater and marine), and that the coal balls were spatially correlated with the marine roof units. Regional studies and local data revealed that the younger, freshwater Energy Shale (mud) originally covered all of the peat deposited at the mine, but the mud was locally removed during a period of erosion. The great majority of coal balls are found within the coal seam, where they were permineralized in situ by carbonates. Some coal balls are found exposed on the eroded coal surface and others are within the channel fill associated with the erosion, which predates any marine sedimentation. Thus, the mineralization of the coal balls was synchronous with the erosion of the Energy Shale mud. Data from C‐and O‐isotope, geochemical, and mineralogical analyses of coal balls and associated materials were used to refine a depositional model of coal‐ball formation. The concentrated coal‐ball areas were created by the triggered degassing of CO 2 from partially decomposed peat in the presence of cations from fresh waters; 13 C/ 12 C ratios in these coal balls average −23.9‰. 13 C/ 12 C ratios as low as −34‰ occurring in the most concentrated coal balls are consistent with CO 2 produced by anaerobic oxidation of methane. Top‐of‐seam coal balls were formed later and show slight to strong marine influence; their 13 C/ 12 C ratios average −10.8‰.

Illinois↗

Rapid maturation of the muscle biochemistry that supports diving in Pacific walruses ( Odobenus rosmarus divergens )

Physiological constraints dictate animals’ ability to exploit habitats. For marine mammals, it is important to quantify physiological limits that influence diving and their ability to alter foraging behaviors. We characterized age-specific dive limits of walruses by measuring anaerobic (acid-buffering capacity) and aerobic (myoglobin content) capacities of the muscles that power hind (longissimus dorsi) and fore (supraspinatus) flipper propulsion. Mean buffering capacities were similar across muscles and age classes (a fetus, five neonatal calves, a 3 month old and 20 adults), ranging from 41.31 to 54.14 slykes and 42.00 to 46.93 slykes in the longissimus and supraspinatus, respectively. Mean myoglobin in the fetus and neonatal calves fell within a narrow range (longissimus: 0.92–1.68 g 100 g −1 wet muscle mass; supraspinatus: 0.88–1.64 g 100 g −1 wet muscle mass). By 3 months post-partum, myoglobin in the longissimus increased by 79%, but levels in the supraspinatus remained unaltered. From 3 months post-partum to adulthood, myoglobin increased by an additional 26% in the longissimus and increased by 126% in the supraspinatus; myoglobin remained greater in the longissimus compared with the supraspinatus. Walruses are unique among marine mammals because they are born with a mature muscle acid-buffering capacity and attain mature myoglobin content early in life. Despite rapid physiological development, small body size limits the diving capacity of immature walruses and extreme sexual dimorphism reduces the diving capacity of adult females compared with adult males. Thus, free-ranging immature walruses likely exhibit the shortest foraging dives while adult males are capable of the longest foraging dives.

Journal of Experimental Biology↗

Nutrient dynamics in the lower Mississippi river floodplain: Comparing present and historic hydrologic conditions

Alterations to the lower Mississippi River-floodplain ecosystem to facilitate commercial navigation and to reduce flooding of agricultural lands and communities in the historic floodplain have changed the hydrologic regime. As a result, the flood pulse usually has a lower water level, is of shorter duration, has colder water temperatures, and a smaller area of floodplain is inundated. Using average hydrologic conditions and water temperatures, we used established nitrogen and phosphorus processes in soils, an aquatic ecosystem model, and fish bioenergetic models to provide approximations of nitrogen and phosphorus flux in Mississippi River flood waters for the present conditions of a 2-month (mid-March to mid-May) flood pulse and for a 3-month (mid-March to mid-June), historic flood pulse. We estimated that the soils and aquatic biota can remove or sequester 542 and 976 kg nitrogen ha -1 during the present and historic hydrologic conditions, respectively. Phosphorus, on the other hand, will be added to the water largely as a result of anaerobic soil conditions but moderated by biological uptake by aquatic biota during both present and historic hydrologic conditions. The floodplain and associated water bodies may provide an important management opportunity for reducing downstream transport of nitrogen in Mississippi River waters. ?? 2009, The Society of Wetland Scientists.

Wetlands↗

Micromorphology and stable-isotope geochemistry of historical pedogenic siderite formed in PAH-contaminated alluvial clay soils, Tennessee, U.S.A

Alluvial clay soil samples from six boreholes advanced to depths of 400-450 cm (top of limestone bedrock) from the Chattanooga Coke Plant (CCP) site were examined micromorphologically and geochemically in order to determine if pedogenic siderite (FeCO3) was present and whether siderite occurrence was related to organic contaminant distribution. Samples from shallow depths were generally more heavily contaminated with polycyclic aromatic hydrocarbons (PAHs) than those at greater depth. The upper 1 m in most boreholes consisted of mixtures of anthropogenically remolded clay soil fill containing coal clinker, cinder grains, and limestone gravel; most layers of coarse fill were impregnated with creosote and coal tar. Most undisturbed soil (below 1 m depth) consisted of highly structured clays exhibiting fine subangular blocky ped structures, as well as redox-related features. Pedogenic siderite was abundant in the upper 2 m of most cores and in demonstrably historical (< 100 years old) soil matrices. Two morphologies were identified: (1) sphaerosiderite crystal spherulites ranging from 10 to 200 um in diameter, and (2) coccoid siderite comprising grape-like "clusters" of crystals 5-20 ??n in diameter. The siderite, formed in both macropores and within fine-grained clay matrices, indicates development of localized anaerobic, low-Eh conditions, possibly due to microbial degradation of organic contaminants. Stable-isotope compositions of the siderite have ??13C values spanning over 25%o (+7 to - 18%o VPDB) indicating fractionation of DIC by multiple microbial metabolic pathways, but with relatively constant ??18O values from (-4.8 ?? 0.66%o VPDB) defining a meteoric sphaerosiderite line (MSL). Calculated isotope equilibrium water ??18O values from pedogenic siderites at the CCP site are from 1 to 5 per mil lighter than the groundwater ??18O values that we estimate for the site. If confirmed by field studies in progress, this observation might call for a reevaluation of low-temperature siderite-water 18O fractionations. Investigations at the CCP site thus provide valuable information on the geochemical conditions under which siderite can form in modern soils, and thus insight on controls on siderite formation in ancient soils. Copyright ?? 2010, SEPM (Society for Sedimentary Geology).

Journal of Sedimentary Research↗

Sequestration of phosphorus by acid mine drainage floc

Solubilization and transport of phosphorus (P) to the water environment is a critical environmental issue. Flocs resulting from neutralizing acid mine drainage (AMD) were tested as a possible low-cost amendment to reduce the loss of soluble P from agricultural fields and animal wastewater. Flocs were prepared by neutralizing natural and synthetic solutions of AMD with limestone, lime, ammonium hydroxide, and sodium hydroxide. Phosphorus sequestration was tested in three distinct environments: water, soil, and manure storage basins. In water, flocs prepared from AMD adsorbed 10 to 20 g P kg −1 dry floc in equilibrium with 1 mg L −1 soluble P. Similar results were observed for both Fe-based and Al-based synthetic flocs. A local soil sample adsorbed about 0.1 g P kg −1 , about two orders of magnitude less. The AMD-derived flocs were mixed with a high-P soil at 5 to 80 g floc kg −1 soil, followed by water and acid (Mehlich-1) extractions. All flocs performed similarly. About 70% of the water-extractable P was sequestered by the floc when applied at a rate of 20 g floc kg −1 soil, whereas plant-available P only decreased by about 30%. Under anaerobic conditions simulating manure storage basins, all AMD flocs reduced soluble P by greater than 95% at a rate of 0.2 g floc g −1 rainbow trout ( Oncorhynchus mykiss ) manure. These findings indicate that AMD flocs could be an effective agent for preventing soluble P losses from soil and manure to the water environment, while at the same time decreasing the costs associated with AMD treatment.

Journal of Environmental Quality↗

Effects of ionic strength, temperature, and pH on degradation of selected antibiotics

Aqueous degradation rates, which include hydrolysis and epimerization, for chlortetracycline (CTC), oxytetracycline (OTC), tetracycline (TET), lincomycin (LNC), sulfachlorpyridazine (SCP), sulfadimethoxine (SDM), sulfathiazole (STZ), trimethoprim (TRM), and tylosin A (TYL) were studied as a function of ionic strength (0.0015, 0.050, or 0.084 mg/L as Na 2 HPO 4 ), temperature (7, 22, and 35°C), and pH (2, 5, 7, 9, and 11). Multiple linear regression revealed that ionic strength did not significantly affect (α = 0.05) degradation rates for all compounds, but temperature and pH affected rates for CTC, OTC, and TET significantly (α = 0.05). Degradation also was observed for TYL at pH 2 and 11. No significant degradation was observed for LNC, SCP, SDM, STZ, TRM, and TYL (pH 5, 7, and 9) under study conditions. Pseudo first-order rate constants, half-lives, and Arrhenius coefficients were calculated where appropriate. In general, hydrolysis rates for CTC, OTC, and TET increased as pH and temperature increased following Arrhenius relationships. Known degradation products were used to confirm that degradation had occurred, but these products were not quantified. Half-lives ranged from less than 6 h up to 9.7 wk for the tetracyclines and for TYL (pH 2 and 11), but no degradation of LIN, the sulfonamides, or TRM was observed during the study period. These results indicate that tetracyclines and TYL at pH 2 and 11 are prone to pH-mediated transformation and hydrolysis in some cases, but not the sulfonamides, LIN nor TRM are inclined to degrade under study conditions. This indicates that with the exception of CTC, OTC, and TET, pH-mediated reactions such as hydrolysis and epimerization are not likely removal mechanisms in surface water, anaerobic swine lagoons, wastewater, and ground water.

Journal of Environmental Quality↗

Methylmercury dynamics in Upper Sacramento Valley rice fields with low background soil mercury levels

Few studies have considered how methylmercury (MeHg, a toxic form of Hg produced in anaerobic soils) production in rice ( Oryza sativa L.) fields can affect water quality, and little is known about MeHg dynamics in rice fields. Surface water MeHg and total Hg (THg) imports, exports, and storage were studied in two commercial rice fields in the Sacramento Valley, California, where soil THg was low (25 and 57 ng g −1 ). The median concentration of MeHg in drainage water exiting the fields was 0.17 ng g −1 (range: <0.007–2.1 ng g −1 ). Compared with irrigation water, drainage water had similar MeHg concentrations, and lower THg concentrations during the growing season. Significantly elevated drainage water MeHg and THg concentrations were observed in the fallow season compared with the growing season. An analysis of surface water loads indicates that fields were net importers of both MeHg (76–110 ng m −2 ) and THg (1947–7224 ng m −2 ) during the growing season, and net exporters of MeHg (35–200 ng m −2 ) and THg (248–6496 ng m −2 ) during the fallow season. At harvest, 190 to 700 ng MeHg m −2 and 1400 to 1700 ng THg m −2 were removed from fields in rice grain. Rice straw, which contained 120 to 180 ng MeHg m −2 and 7000–10,500 ng m −2 THg was incorporated into the soil. These results indicate that efforts to reduce MeHg and THg exports in rice drainage water should focus on the fallow season. Substantial amounts of MeHg and THg were stored in plants, and these pools should be considered in future studies.

Journal of Environmental Quality↗

Hydric soils in a southeastern Oregon vernal pool

Vernal pools on the High Lava Plain of the northern Great Basin become ponded in most years, but their soils exhibit weak redoximorphic features indicative of hydric conditions. We studied the hydrology, temperature, redox potentials, soil chemistry, and soil morphology of a vernal pool to determine if the soils are hydric, and to evaluate hydric soil field indicators. We collected data for 3 yr from piezometers, Pt electrodes, and thermocouples. Soil and water samples were analyzed for pH, organic C, and extractable Fe and Mn. Soils were ponded from January through April or May, but subsurface saturation was never detected. Soil temperatures 50 cm below the surface rose above 5°C by March. Clayey Bt horizons perched water and limited saturation to the upper 10 cm. Redox potentials at a 5-cm depth were often between 200 and 300 mV, indicating anaerobic conditions, but producing soluble Fe 2+ concentrations <1 mg L −1 Extractable soil Fe contents indicated Fe depletion from pool surface horizons and accumulation at or near the upper Bt1 horizon. Depletions and concentrations did not satisfy the criteria of any current hydric soil indicators. We recommend development of new indicators based on acceptance of fewer, less distinct redox concentrations for recognition of a depleted A horizon, and on presence of a thin zone containing redox concentrations located in the upper part of the near-surface perching horizon.

Soil Science Society of America Journal↗

Transport and time lag of chlorofluorocarbon gases in the unsaturated zone, Rabis Creek, Denmark

Transport of chlorofluorocarbon (CFC) gases through the unsaturated zone to the water table is affected by gas diffusion, air–water exchange (solubility), sorption to the soil matrix, advective–dispersive transport in the water phase, and, in some cases, anaerobic degradation. In deep unsaturated zones, this may lead to a time lag between entry of gases at the land surface and recharge to groundwater. Data from a Danish field site were used to investigate how time lag is affected by variations in water content and to explore the use of simple analytical solutions to calculate time lag. Numerical simulations demonstrate that either degradation or sorption of CFC-11 takes place, whereas CFC-12 and CFC-113 are nonreactive. Water flow did not appreciably affect transport. An analytical solution for the period with a linear increase in atmospheric CFC concentrations (approximately early 1970s to early 1990s) was used to calculate CFC profiles and time lags. We compared the analytical results with numerical simulations. The time lags in the 15-m-deep unsaturated zone increase from 4.2 to between 5.2 and 6.1 yr and from 3.4 to 3.9 yr for CFC-11 and CFC-12, respectively, when simulations change from use of an exponential to a linear increase in atmospheric concentrations. The CFC concentrations at the water table before the early 1990s can be estimated by displacing the atmospheric input function by these fixed time lags. A sensitivity study demonstrates conditions under which a time lag in the unsaturated zone becomes important. The most critical parameter is the tortuosity coefficient. The analytical approach is valid for the low range of tortuosity coefficients (τ = 0.1–0.4) and unsaturated zones greater than approximately 20 m in thickness. In these cases the CFC distribution may still be from either the exponential or linear phase. In other cases, the use of numerical models, as described in our work and elsewhere, is an option.

Rabis Creek↗

Unsaturated zone CO2, CH4, and δ13C-CO2 at an arid region low-level radioactive waste disposal site

Elevated tritium, radiocarbon, Hg, and volatile organic compounds associated with low-level radioactive waste (LLRW) at the USGS Amargosa Desert Research Site (ADRS) have stimulated research on factors and processes that affect contaminant gas distribution and transport. Consequently, we examined the sources, mixing, and biogeochemistry of CO 2 and CH 4 , two additional important species in the unsaturated zone at ADRS. In spring 2015 and 2016, shallow unsaturated zone gas samples were collected from the 1.5-m depth both inside and outside the LLRW disposal area. Samples also were collected from two 110-m-deep multilevel gas-sampling boreholes and a distant background site. These samples were analyzed for CO 2 mole fraction ( x CO 2 ) and C isotopic composition (δ 13 C-CO 2 ) and CH 4 mole fraction ( x CH 4 ). Graphical analysis of the results indicates mixing of CO 2 characteristic of the root zone (δ 13 C −18 to −19‰), deep soil gas of the capillary fringe (−13 to −15‰), and CO 2 produced by microbial respiration of organic matter disposed in the LLRW trenches (−22 to −25‰). Distribution of CH 4 overall reflects atmospheric sources and production in anaerobic microzones in the LLRW area and methanotrophy in the undisturbed shallow subsurface outside the LLRW area. Although x CH 4 reflecting lateral transport from the LLRW area is decreasing with time in the deep profiles, deep unsaturated zone x CO 2 has changed little in recent decades. The results imply that CH 4 and δ 13 C-CO 2 may serve as good tracers of anthropogenic effects in the unsaturated zone even when CO 2 primarily reflects natural processes.

Nevada↗

Changes in oxygen and primary production of the Patuxent estuary, Maryland, 1963 through 1969

From 1963 through 1969, the U.S. Geological Survey operated a water-quality monitor system in the upper-middle Patuxent estuary, near Benedict, Maryland. Over the period of record, a pronounced change occurred in the diel (24 hr.) oxygen measurement, particularly during the months of July, August, and September. Annual variations of dissolved oxygen ranged from 3.6 to 15.0 mg liter −1 in 1964 and from 2.3 to 16.5 mg liter −1 in 1969 with percentage saturation varying from 60 to 130 percent in 1964 and from 30 to 184 percent in 1969. The magnitude of diel summer oxygen variation changed from about 3 to 7 mg liter −1 day −1 over the same period. From hourly values of temperature, oxygen, and conductivity, gross primary production (GP) and respiration (R) were estimated. Data representing greatest daily change for spring, summer, and autumn of each year and “average” values for each month of years 1964 and 1969 were analyzed for GP and R. From the seasonal data, GP ranged from about 3 to 25 g O 2 m −2 day −1 , and R ranged from about 4 to 32 g O 2 m −2 day −1 . From the “average” days, GP ranged from 2 to 10 g O 2 m −2 day −1 in 1964 and from 1 to 16 in 1969. In 1964, daily average GP was 5.2 g O 2 m −2 day −1 as compared to 6.1 in 1969, and respiration was 6.1 g O 2 m −2 day −1 in 1964 versus 10.2 g O 2 m −2 day −1 in 1969, increases of 20 and 16 percent, respectively. Ratios of GP/R averaged 0.84 in 1964 versus 0.60 in 1969, reflecting a larger respiration in 1969 and suggesting a trend towards community instability. Productivity estimates by other investigators showed a two-to threefold increase in production over the same period of time. The increases in production were attributed to upstream domestic waste loading. If the present trend increases, metabolic imbalance and anaerobic conditions may develop.

Maryland↗

Historical trends in Chesapeake Bay dissolved oxygen based on benthic foraminifera from sediment cores

Environmentally sensitive benthic foraminifera (protists) from Chesapeake Bay were used as bioindicators to estimate the timing and degree of changes in dissolved oxygen (DO) over the past five centuries. Living foraminifers from 19 surface samples and fossil assemblages from 11 sediment cores dated by 210 Pb, 137 Cs, 14 C, and pollen stratigraphy were analyzed from the tidal portions of the Patuxent, Potomac, and Choptank Rivers and the main channel of the Chesapeake Bay. Ammonia parkinsoniana , a facultative anaerobe tolerant of periodic anoxic conditions, comprises an average of 74% of modern Chesapeake foraminiferal assemblages (DO-0.47 and 1.72 ml l −1 ) compared to 0% to 15% of assemblages collected in the 1960s. Paleoecological analyses show that A. parkinsoniana was absent prior to the late 17th century, increased to 10–25% relative frequency between approximately 1670–1720 and 1810–1900, and became the dominant (60–90%) benthic formaniferal species in channel environments beginning in the early 1970s. Since the 1970s, deformed tests of A. parkinsoniana occur in all cores (10–20% of Ammonia ), suggesting unprecedented stressful benthic conditions. These cores indicate that prior to the late 17th century, there was limited oxygen depletion. During the past 200 years, decadal scale variability in oxygen depletion has occurred, as dysoxic (DO=0.1–1.0 ml l −1 ), perhaps short-term anoxic (DO<0.1 ml l −1 ) conditions developed. The most extensive (spatially and temporally) anoxic conditions were reached during the 1970s. Over decadal timescales, DO variability seems to be linked closely to climatological factors influencing river discharge; the unprecedented anoxia since the early 1970s is attributed mainly to high freshwater flow and to an increase in nutrient concentrations from the watershed.

Maryland, Virginia↗

Morphological adaptation with no mitochondrial DNA differentiation in the coastal plain swamp sparrow

We estimated genetic differentiation between morphologically distinct tidal marsh populations of Swamp Sparrows ( Melospiza georgiana nigrescens ) and the more widespread inland populations ( M. g. georgiana and M. g. ericrypta ). The tidal marsh populations are consistently grayer with more extensive black markings (particularly in the crown), and their bills are larger. These differences are variously shared with other species of salt marsh birds and small mammals. We analyzed mitochondrial DNA sequences (5′ end of control region, COII/t-lys/ATPase8, and ND2) of Swamp Sparrows and found low levels of genetic variation and no evidence of geographic structure. These results suggest a rapid and recent geographic expansion of Swamp Sparrows from restricted Pleistocene populations. Morphological differentiation has occurred without long-term genetic isolation, suggesting that selection on the divergent traits is intense. The grayer and more melanistic plumage is probably cryptic coloration for foraging on tidal mud, which tends to be grayish as a result of the formation of iron sulfides, rather than iron oxides, under anaerobic conditions.

The Auk↗