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The global environmental agenda urgently needs a semantic web of knowledge

Progress in key social-ecological challenges of the global environmental agenda (e.g., climate change, biodiversity conservation, Sustainable Development Goals) is hampered by a lack of integration and synthesis of existing scientific evidence. Facing a fast-increasing volume of data, information remains compartmentalized to pre-defined scales and fields, rarely building its way up to collective knowledge. Today's distributed corpus of human intelligence, including the scientific publication system, cannot be exploited with the efficiency needed to meet current evidence synthesis challenges; computer-based intelligence could assist this task. Artificial Intelligence (AI)-based approaches underlain by semantics and machine reasoning offer a constructive way forward, but depend on greater understanding of these technologies by the science and policy communities and coordination of their use. By labelling web-based scientific information to become readable by both humans and computers, machines can search, organize, reuse, combine and synthesize information quickly and in novel ways. Modern open science infrastructure—i.e., public data and model repositories—is a useful starting point, but without shared semantics and common standards for machine actionable data and models, our collective ability to build, grow, and share a collective knowledge base will remain limited. The application of semantic and machine reasoning technologies by a broad community of scientists and decision makers will favour open synthesis to contribute and reuse knowledge and apply it toward decision making.

Environmental Evidence

Assessing and implementing the concept of Blue Economy in Laurentian Great Lakes fisheries: Lessons from coupled human and natural systems

Inland fisheries often receive little to no attention in global discussions about sustainable development. The consequences of overlooking inland fisheries in sustainability dialogues are increasingly problematic as fisheries stressors (e.g., overharvest, species invasion, climate change, habitat modification) intensify. Elevating the global profile of inland fisheries requires an approach for quantifying and clearly conveying the ecological, economic, and societal values of these systems. One such approach involves the Blue Economy, a multifaceted concept initially used to describe the intersection of marine conservation and sustainable use of marine resources for economic growth. Although conceptually powerful, the Blue Economy has rarely been applied to inland waters and fisheries. To address this knowledge gap, we conceptualized Laurentian Great Lakes fisheries from a Blue Economy perspective. In particular, we evaluated the utility of the coupled human and natural systems (CHANS) framework for characterizing the ecological, economic, and societal values of Laurentian Great Lakes fisheries and associated contributions to the Blue Economy (e.g., human livelihoods, food security, recreation, conservation, economic prosperity). There are numerous opportunities to leverage CHANS methods (e.g., metacoupling, telecoupling) and associated mathematical models to advance fisheries science, inform fisheries management, and ultimately move toward a Blue Economy in the Laurentian Great Lakes. To that end, we demonstrated applications of CHANS methods, discussed strategies for communicating with stakeholders, and provided insights for navigating challenges to developing a Blue Economy in the Laurentian Great Lakes—a model that could be used in the African Great Lakes and other large ecosystems in the world.

Laurentian Great Lakes

Late neogene history of the Pacific-Caribbean gateway

Planktic foraminiferal provinces of Caribbean DSDP Hole 502A and East Pacific DSDP Hole 503A have been analyzed and compared with benthic and planktic isotope records, carbonate, hiatus events, and sea level changes. Four major events are evident in the closure history of the Pacific-Caribbean gateway, at 6.2, 4.2, 2.4 and 1.8 Ma. The faunal change at 6.2 Ma coincides with the δ 13 C shift and is primarily caused by upwelling in the western Caribbean. This suggests restricted circulation of intermediate water and deflection northeastward, strengthening the Gulf Stream as reflected in the first major erosion on Blake Plateau. The second faunal change, at 4.2 Ma, coincides with increased surface water salinity evident in δ 18 O data and indicates increasingly restricted surface water exchange. Divergence of faunal provinces beginning at 2.4 Ma is marked by increasing abundance of high salinity tolerant species ( Globigerinoides ruber ) in the Caribbean. This suggests that initial closure of the Pacific-Caribbean gateway and cessation of sustained surface current flow between the Pacific and Caribbean occurred as late as 2.4 Ma. Maximum divergence of faunal provinces begins at 1.8 Ma and continues to the present. This implies that at least incipient littoral-neritic leakage occurred across the Pacific-Caribbean gateway between 2.4 and 1.8 Ma, with final closure by 1.8 Ma.

Journal of South American Earth Sciences

Enabling real-time user interaction for decision support: Experiences extending a local agave platform metadata service

The University of Hawai'i Information Technology Services Cyber-infrastructure team in partnership with the United States Geological Survey developed the Hawai'i groundwater recharge tool, a decision support tool, as part of the 'Ike Wai Gateway to support water sustainability research for the state of Hawai'i. To enable the development of the tool within the existing University of Hawai'i Agave platform that the 'Ike Wai Gateway is built on, the Metadata application programmatic interface (API) and Agave infrastructure needed to be extended to store and retrieve spatial data and handle a larger number of requests. The development team successfully added the functionality to the local University of Hawai'i Agave platform instance to support the storage of deserialized vector data and metadata that can be spatially queried across hundreds of thousands of records to enable decision support applications within a science gateway.

Hawaii

Pliocene-climate history of the western United States derived from lacustrine ostracodes

Pliocene sediments from several sites in western North America contain ostracodes indicating deposition in lacustrine and wetland settings. The ostracodes offer a means of reconstructing the aquatic paleoenvironment. Because water temperature, chemistry, and lake volume are coupled to climate, reconstruction of these parameters provides a direct insight into Pliocene climate. The site ages were determined from tephrochronology, paleomagnetics, and associated mammals. The morphology of many ostracode species also provides direct information about the paleoenvironment in which they lived. During the Pliocene (about 3.5-2.5 Ma) some species have unusually ornate carapace morphology indicative of large geologically stable lakes, which must have required a stable climate to sustain them. North American Pliocene climate changed from a modern-like state 4.5-3.5 Ma to a period with greater precipitation and less evaporation than today, 3.5-2.5 Ma. This wetter period, inferred from the large geologically long-lived lakes, implies a stable atmospheric circulation pattern. The stable circulation pattern collapsed around 2.5 Ma and climate returned to a modern-like situation.

western United States

Climate change hotspots and implications for the global subsea telecommunications network

A global network of subsea telecommunications cables underpins our daily lives, enabling >95% of global digital data transfer, $trillions/day in financial trading, and providing critical communications links, particularly to remote, low-income countries. Despite their importance, subsea cables and their landing stations are vulnerable to damage by natural hazards, including storm surges, waves, cyclones, earthquakes, floods, volcanic eruptions , submarine landslides and ice scour. However, the likelihood or recurrence interval of many of these types of events will likely change under future projected climate change scenarios, compounded by sea-level rise; potentially increasing hazard severity, creating previously unanticipated hazards, or hazards may shift to new locations during the 20–30-year operational life of cable systems. To date, no study has assessed the wide-reaching impacts of future climate change on subsea cables and landing stations on a global scale. Here, for the first time we synthesize the current evidence base, based on published peer-reviewed datasets, to fill this crucial knowledge gap, specifically to assess how and where future climate change is likely to impact subsea cables and their shore-based infrastructure. We find that ocean conditions are highly likely to change on a global basis as a result of climate change, but the feedbacks and links between climate change, natural processes and human activities are often complicated, resulting in a high degree of geographic variability. We identify climate change ‘hotspots’ (regions and locations likely to experience the greatest impacts) but find that not all areas will be affected in the same manner, nor synchronously by the same processes. We conclude that cable routes should carefully consider locally-variable drivers of hazard frequency and magnitude. Consideration should be given both to instantaneous events (e.g. landslides, tropical cyclones) as well as longer-term, sustained impacts (e.g. seabed currents that circulate even in deep water). Multiple factors can combine to increase the risk posed to subsea cables, hence a holistic approach is essential to assess the compounded effects of both natural processes and human activities in the future.

Earth Science Reviews

Increasing the uptake of ecological model results in policy decisions to improve biodiversity outcomes

Models help decision-makers anticipate the consequences of policies for ecosystems and people; for instance, improving our ability to represent interactions between human activities and ecological systems is essential to identify pathways to meet the 2030 Sustainable Development Goals. However, use of modeling outputs in decision-making remains uncommon. We share insights from a multidisciplinary National Socio-Environmental Synthesis Center working group on technical, communication, and process-related factors that facilitate or hamper uptake of model results. We emphasize that it is not simply technical model improvements, but active and iterative stakeholder involvement that can lead to more impactful outcomes. In particular, trust- and relationship-building with decision-makers are key for knowledge-based decision making. In this respect, nurturing knowledge exchange on the interpersonal (e.g., through participatory processes), and institutional level (e.g., through science-policy interfaces across scales), represent promising approaches. To this end, we offer a generalized approach for linking modeling and decision-making.

Environmental Modelling & Software

Satellite observations reveal widespread alteration of river thermal regimes by U.S. dams

Dams are well known to alter river thermal regimes, but assessments of downstream temperature changes have been constrained to single dams, single basins, or specific seasonal windows, thus limiting knowledge of their widespread impacts. We used satellite-based thermal infrared observations to quantify river surface temperature differences up- and downstream of 287 large dams in the United States from 2013 to 2024 across all seasons. We found downstream river temperature differences for the majority (71%) of longitudinal river profiles. These downstream changes were typically warmer (60%), and, on average, were sustained or continued to increase within 20 km downstream of the dam. We also found that the magnitude and frequency of downstream alterations varied by dam type, with 91% of extreme (≥ ±4°C) differences occurring at dams with reservoirs. This work documents the pervasive effects of large dams on downstream ecosystems across all seasons on a national scale.

Science Advances

Challenges creating monarch butterfly management strategies for electric power companies in the United States

Returning monarch butterflies ( Danaus plexippus ) to sustainable levels of abundance will require an array of contributors to protect and restore habitat over broad areas. Due to the diversity and scale of land managed by electric power companies across the monarch range, plus an additional 32 million hectares needed for new solar arrays by 2050 to meet renewable energy goals, the industry may have potential to contribute to monarch conservation. However, it is challenging to clearly understand an individual company’s potential for monarch conservation because of the scale and distribution of their specific land assets (ranging from 4,800 to 240,000 hectares in this study alone), the complexity of monarch science, and the lack of a science-based approach for evaluating large land assets for monarch habitat. With monarchs potentially being protected under the United States Endangered Species Act in the future and thereby limiting land management approaches, there is interest from electric power companies to understand how their lands relate to monarchs. In collaboration with companies, we developed a GIS-based model to identify company landholdings that contain high-quality monarch habitat and applied the model to specific landholdings of eight power companies in the United States. We then facilitated discussions with company teams to balance conservation goals, corporate risk, and social opinion. This paper describes non-confidential results for developing a national GIS-based monarch habitat model and applying it to electric power companies who are considering monarch conservation while simultaneously transitioning to a new clean energy future. The model and applied experience may be useful for other organizations working across large landscapes to manage monarchs.

conterminous United States

Disease prevalence and snail predation associated with swell-generated damage on the threatened coral, Acropora palmata (Lamarck)

Disturbances such as tropical storms cause coral mortality and reduce coral cover as a direct result of physical damage. Storms can be one of the most important disturbances in coral reef ecosystems, and it is crucial to understand their long-term impacts on coral populations. The primary objective of this study was to determine trends in disease prevalence and snail predation on damaged and undamaged colonies of the threatened coral species, Acropora palmata, following an episode of heavy ocean swells in the US Virgin Islands (USVI). At three sites on St. Thomas and St. John, colonies of A. palmata were surveyed monthly over 1 year following a series of large swells in March 2008 that fragmented 30–93% of colonies on monitored reefs. Post-disturbance surveys conducted from April 2008 through March 2009 showed that swell-generated damage to A. palmata caused negative indirect effects that compounded the initial direct effects of physical disturbance. During the 12 months after the swell event, white pox disease prevalence was 41% higher for colonies that sustained damage from the swells than for undamaged colonies (df = 207, p = 0.01) with greatest differences in disease prevalence occurring during warm water months. In addition, the corallivorous snail, Coralliophila abbreviata, was 46% more abundant on damaged corals than undamaged corals during the 12 months after the swell event (df = 207, p = 0.006).

Frontiers in Marine Science

Estimating black bear density in New Mexico using noninvasive genetic sampling coupled with spatially explicit capture-recapture methods

During the 2004–2005 to 2015–2016 hunting seasons, the New Mexico Department of Game and Fish (NMDGF) estimated black bear abundance (Ursus americanus) across the state by coupling density estimates with the distribution of primary habitat generated by Costello et al. (2001). These estimates have been used to set harvest limits. For example, a density of 17 bears/100 km2 for the Sangre de Cristo and Sacramento Mountains and 13.2 bears/100 km2 for the Sandia Mountains were used to set harvest levels. The advancement and widespread acceptance of non-invasive sampling and mark-recapture methods, prompted the NMDGF to collaborate with the New Mexico Cooperative Fish and Wildlife Research Unit and New Mexico State University to update their density estimates for black bear populations in select mountain ranges across the state. We established 5 study areas in 3 mountain ranges: the northern (NSC; sampled in 2012) and southern Sangre de Cristo Mountains (SSC; sampled in 2013), the Sandia Mountains (Sandias; sampled in 2014), and the northern (NSacs) and southern Sacramento Mountains (SSacs; both sampled in 2014). We collected hair samples from black bears using two concurrent non-invasive sampling methods, hair traps and bear rubs. We used a gender marker and a suite of microsatellite loci to determine the individual identification of hair samples that were suitable for genetic analysis. We used these data to generate mark-recapture encounter histories for each bear and estimated density in a spatially explicit capture-recapture framework (SECR). We constructed a suite of SECR candidate models using sex, elevation, land cover type, and time to model heterogeneity in detection probability and the spatial scale over which detection probability declines. We used Akaike’s Information Criterion corrected for small sample size (AICc) to rank and select the most supported model from which we estimated density. We set 554 hair traps, 117 bear rubs and collected 4,083 hair samples. We identified 725 (367 M, 358 F) individuals; the sex ratio for each study area was approximately equal. Our density estimates varied within and among mountain ranges with an estimated density of 21.86 bears/100 km2 (95% CI: 17.83 – 26.80) for the NSC, 19.74 bears/100 km2 (95% CI: 13.77 – 28.30) in the SSC, 25.75 bears/100 km2 (95% CI: 13.22 – 50.14) in the Sandias, 21.86 bears/100 km2 (95% CI: 17.83 – 26.80) in the NSacs, and 16.55 bears/100 km2 (95% CI: 11.64 – 23.53) in the SSacs. Overall detection probability for hair traps and bear rubs, combined, was low across all study areas and ranged from 0.00001 to 0.02. We speculate that detection probabilities were affected by failure of some hair samples to produce a complete genotype due to UV degradation of DNA, and our inability to set and check some sampling devices due to wildfires in the SSC. Ultraviolet radiation levels are particularly high in New Mexico compared to other states where NGS methods have been used because New Mexico receives substantial amounts of sunshine, is relatively high in elevation (1,200 m – 4,000 m), and is at a lower latitude. Despite these sampling difficulties, we were able to produce density estimates for New Mexico black bear populations with levels of precision comparable to estimated black bear densities made elsewhere in the U.S. Our ability to generate reliable black bear density estimates for 3 New Mexico mountain ranges is attributable to our use of a statistically robust study design and analytical method. There are multiple factors that need to be considered when developing future SECR-based density estimation projects. First, the spatial extent of the population of interest and the smallest average home range size must be determined; these will dictate size of the trapping array and spacing necessary between hair traps. The number of technicians needed and access to the study areas will also influence configuration of the trapping array. We believe shorter sampling occasions could be implemented to reduce degradation of DNA due to UV radiation; this might help increase amplification rates and thereby increase both the number of unique individuals identified and the number of recaptures, improving the precision of the density estimates. A pilot study may be useful to determine the length of time hair samples can remain in the field prior to collection. In addition, researchers may consider setting hair traps and bear rubs in more shaded areas (e.g., north facing slopes) to help reduce exposure to UV radiation. To reduce the sampling interval it will be necessary to either hire more field personnel or decrease the number of hair traps per sampling session. Both of these will enhance detection of long-range movement events by individual bears, increase initial capture and recapture rates, and improve precision of the parameter estimates. We recognize that all studies are constrained by limited resources, however, increasing field personnel would also allow a larger study area to be sampled or enable higher trap density. In conclusion, we estimated the density of black bears in 5 study areas within 3 mountains ranges of New Mexico. Our estimates will aid the NMDGF in setting sustainable harvest limits. Along with estimates of density, information on additional demographic rates (e.g., survival rates and reproduction) and the potential effects that climate change and future land use may have on the demography of black bears may also help inform management of black bears in New Mexico, and may be considered as future areas for research.

New Mexico

Development of a species status assessment process for decisions under the U.S. Endangered Species Act

Decisions under the U.S. Endangered Species Act (ESA) require scientific input on the risk that the species will become extinct. A series of critiques on the role of science in ESA decisions have called for improved consistency and transparency in species risk assessments and clear distinctions between science input and policy application. To address the critiques and document the emerging practice of the U.S. Fish and Wildlife Service (USFWS), we outline an assessment process based on principles and practices of risk and decision analyses that results in a scientific report on species status. The species status assessment (SSA) process has three successive stages: 1) document the life history and ecological relationships of the species in question to provide the foundation for the assessment, 2) describe and hypothesize causes for the current condition of the species, and 3) forecast the species' future condition. The future condition refers to the ability of a species to sustain populations in the wild under plausible future scenarios. The scenarios help explore the species' response to future environmental stressors and to assess the potential for conservation to intervene to improve its status. The SSA process incorporates modeling and scenario planning for prediction of extinction risk and applies the conservation biology principles of representation, resiliency, and redundancy to evaluate the current and future condition. The SSA results in a scientific report distinct from policy application, which contributes to streamlined, transparent, and consistent decision-making and allows for greater technical participation by experts outside of the USFWS, for example, by state natural resource agencies. We present two case studies based on assessments of the eastern massasauga rattlesnake Sistrurus catenatus and the Sonoran Desert tortoise Gopherus morafkai to illustrate the process. The SSA builds upon the past threat-focused assessment by including systematic and explicit analyses of a species' future response to stressors and conservation, and as a result, we believe it provides an improved scientific analysis for ESA decisions.

Journal of Fish and Wildlife Management

World heritage site - Bien du Patrimoine Mondial - Kluane/Wrangell-St. Elias/Glacier Bay/Tatshenshini-Alsek

The four parks depicted on this map make up a single World Heritage Site that covers 24.3 million acres. Together, they comprise the largest internationally protected land-based ecosystem on the planet. The United Nations Educational, Scientific and Cultural Organization (UNESCO) established the World Heritage Program in 1972 for the identification and protection of the world?s irreplaceable natural and cultural resources. World Heritage Sites are important as storehouses of memory and evolution, as anchors for sustainable tourism and community, and as laboratories for the study and understanding of the earth and culture. This World Heritage Site protects the prominent mountain ranges of Kluane, Wrangell, Saint Elias, and Chugach. It includes many of the tallest peaks on the continent, the world's largest non-polar icefield, extensive glaciers, vital watersheds, and expanses of dramatic wilderness. [Les quatre parcs figurant sur cette carte ne constituent qu?un seul site du patrimoine mondial recouvrant plus de 99 millions de km2, ce qui en fait le plus grand ecosysteme terrestre protege par loi internationale. En 1972, L?UNESCO (l?organisation des Nations Unies pour les sciences, l'education et la culture) a etabli le programme du patrimoine mondial afin d?identifier et de proteger les ressources naturelles et culturelles irremplacables de notre plan?te. Si les sites du patrimoine mondial sont si importants c'est parce qu'ils representent a la fois des livres ouverts sur l?histoire de la Terre, le point de depart du tourisme durable et du developpement des collectivites, des laboratoires pour etudier et comprendre la nature et la culture. Ce site du patrimoine mondial assure la protection des chaines de montagnes de Kluane, Wrangell, Saint Elias, et Chugach. On y trouve plusieurs des plus hauts sommets du continent, le plus grand champ de glace non-polaire du monde, d?immenses glaciers, des bassins hydrologiques essentiels, et de la nature sauvage a perte de vue. ]

Scientific Investigations Map

Biocrust science and global change

Global environmental changes such as climate and land‐use change affect ecosystems worldwide, and this New Phytologist Virtual Issue brings together fundamental research questions and novel approaches associated with the study of biological soil crusts in the context of such shifts. In a changing world, organisms can display a limited set of responses that will determine their persistence over varied spatial and temporal scales. Specifically, organisms might tolerate the change – for example, via phenotypic plasticity – and remain present in local communities. Alternatively, organisms might shift or retract their range to match their historical niche, they may adapt to the directional selection pressures imposed by change, or they could be driven to local (and possibly global) extinction. Efforts to understand which of these responses particular plant species or assemblages will exhibit are necessary for predicting changes in ecosystem functioning and trophic interactions under global change scenarios, and for managing and supporting sustainable terrestrial ecosystems. Accordingly, the assessment of plant responses to global change has become a significant research focus. Despite this impressive effort, our understanding and combined work to measure the responses to global change for species and communities of nonvascular autotrophs, such as the cyanobacteria, lichens, and bryophytes that form biological soil crusts (Fig. 1), remain rare compared with the large focus on vascular plants (Fig. 2; Reed et al., 2016). Nevertheless, these nonvascular photosynthetic communities and their responses to change could have critical implications for determining ecosystem structure and function at the global‐scale (Elbert et al., 2012; Ferrenberg et al., 2017; Rodriguez‐Caballero et al., 2018).

New Phytologist

A review on cylindrospermopsin: the global occurrence, detection, toxicity and degradation of a potent cyanotoxin

Cylindrospermopsin is an important cyanobacterial toxin found in water bodies worldwide. The ever-increasing and global occurrence of massive and prolonged blooms of cylindrospermopsin-producing cyanobacteria poses a potential threat to both human and ecosystem health. Its toxicity is associated with metabolic activation and may involve mechanisms that adversely affect a wide variety of targets in an organism. Cylindrospermopsin has been shown to be cytotoxic, dermatotoxic, genotoxic, hepatotoxic in vivo, developmentally toxic, and may be carcinogenic. Human exposure may occur through drinking water, during recreational activities and by consuming foods in which the toxin may have bioaccumulated. Drinking water shortages of sufficient quality coupled with growing human pressures and climate variability and change necessitate an integrated and sustainable water management program. This review presents an overview of the importance of cylindrospermopsin, its detection, toxicity, worldwide distribution, and lastly, its chemical and biological degradation and removal by natural processes and drinking water treatment processes.

Environmental Science: Processes and Impacts

Natural resource management decision-making under climate uncertainty: Building social-ecological resilience in southwestern Colorado

The goal of this project was to facilitate climate change adaptation that contributes to social-ecological resilience, ecosystem and species conservation, and sustainable human communities in southwestern Colorado. The team developed and piloted integrated adaptation planning tools and principles that merge the strengths of the iterative scenario process, the Adaptation for Conservation Targets (ACT) planning framework, institutional analysis, and climate modeling. These tools and principles generated practical strategies and scientific knowledge to advance climate change adaptation in both the Gunnison River Basin and San Juan River Basin and, potentially, other landscapes. A key objective of this project was to work with decision-makers to develop social-ecological adaptation strategies and coordinate actions to reduce the impacts of a changing climate on nature and people. To accomplish this, the project blended science (biophysical and social) and participatory approaches to integrate expert knowledge, land management decision making, and local needs. These adaptation strategies and their creation process were documented by the project team to assist communities and scientists elsewhere who are grappling with the challenges posed by climate change.

Colorado

Reclaiming freshwater sustainability in the Cadillac Desert

Increasing human appropriation of freshwater resources presents a tangible limit to the sustainability of cities, agriculture, and ecosystems in the western United States. Marc Reisner tackles this theme in his 1986 classic Cadillac Desert: The American West and Its Disappearing Water . Reisner's analysis paints a portrait of region-wide hydrologic dysfunction in the western United States, suggesting that the storage capacity of reservoirs will be impaired by sediment infilling, croplands will be rendered infertile by salt, and water scarcity will pit growing desert cities against agribusiness in the face of dwindling water resources. Here we evaluate these claims using the best available data and scientific tools. Our analysis provides strong scientific support for many of Reisner's claims, except the notion that reservoir storage is imminently threatened by sediment. More broadly, we estimate that the equivalent of nearly 76% of streamflow in the Cadillac Desert region is currently appropriated by humans, and this figure could rise to nearly 86% under a doubling of the region's population. Thus, Reisner's incisive journalism led him to the same conclusions as those rendered by copious data, modern scientific tools, and the application of a more genuine scientific method. We close with a prospectus for reclaiming freshwater sustainability in the Cadillac Desert, including a suite of recommendations for reducing region-wide human appropriation of streamflow to a target level of 60%.

Proceedings of the National Academy of Sciences of

Extended abstracts from the Coastal Habitats in Puget Sound (CHIPS) 2006 Workshop

Puget Sound is the second largest estuary in the United States. Its unique geology, climate, and nutrient-rich waters produce and sustain biologically productive coastal habitats. These same natural characteristics also contribute to a high quality of life that has led to a significant growth in human population and associated development. This population growth, and the accompanying rural and urban development, has played a role in degrading Puget Sound ecosystems, including declines in fish and wildlife populations, water-quality issues, and loss and degradation of coastal habitats. In response to these ecosystem declines and the potential for strategic large-scale preservation and restoration, a coalition of local, State, and Federal agencies, including the private sector, Tribes, and local universities, initiated the Puget Sound Nearshore Ecosystem Restoration Project (PSNERP). The Nearshore Science Team (NST) of PSNERP, along with the U.S. Geological Survey, developed a Science Strategy and Research Plan (Gelfenbaum and others, 2006) to help guide science activities associated with nearshore ecosystem restoration. Implementation of the Research Plan includes a call for State and Federal agencies to direct scientific studies to support PSNERP information needs. In addition, the overall Science Strategy promotes greater communication with decision makers and dissemination of scientific results to the broader scientific community. On November 14–16, 2006, the U.S. Geological Survey sponsored an interdisciplinary Coastal Habitats in Puget Sound (CHIPS) Research Workshop at Fort Worden State Park, Port Townsend, Washington. The main goals of the workshop were to coordinate, integrate, and link research on the nearshore of Puget Sound. Presented research focused on three themes: (1) restoration of large river deltas; (2) recovery of the nearshore ecosystem of the Elwha River; and (3) effects of urbanization on nearshore ecosystems. The more than 35 presentations covered a wide range of ongoing inter-disciplinary research, including studies of sediment geochemistry of aquatic environments, sediment budgets, tracking fish pathways, expansion of invasive forams, beach and nearshore sedimentary environments, using influence diagrams as a decision support tool, forage fish, submarine groundwater, and much, much more. The primary focus within these themes was on developing information on the physical, chemical, and biological processes, as well as the human dimensions, associated with the restoration or rehabilitation of the nearshore environment. The workshop was an excellent opportunity for USGS scientists and collaborators who are working on Puget Sound coastal habitats to present their preliminary findings, discuss upcoming research, and to identify opportunities for interdisciplinary collaboration. A compilation of extended abstracts from workshop participants, this proceedings volume serves as a useful reference for attendees of the workshop and for those unable to attend. Taken together, the abstracts in this report provide a view of the current status of USGS multidisciplinary research on Puget Sound coastal habitats.

Open-File Report