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Infrared photography and imagery in water resources research

This article briefly describes the characteristics of infrared radiation and demonstrates how infrared photography and infrared imagery can be applied to water resources research, specifically to the identification and description of hydrologic features.

Journal - American Water Works Association↗

Establishment of a fish community in the Hayden-Rhodes and Salt-Gila aqueducts, Arizona

Fish populations were studied in the Central Arizona Projectˈs canal system during the first 4 years of aqueduct operation (1986–1989). Ichthyoplankton entering the canal from Lake Havasu averaged 1 larva/m 3 during April–June 1987 and 1988. Larval fish densities increased significantly in downstream samples, substantiating diver observations that fish were spawning in the canal system. Of the 16 fish species collected, 14 were assumed to have originated from Lake Havasu and 2 were introduced by anglers from their bait buckets. Initially, the fish community was dominated numerically by threadfin shad Dorosoma petenense (>88%), centrarchids (< 10%), cyprinids (<2%), and striped bass Morone saxatilis (<I%). However, as annual water diversions increased from 1.3 × 10 8 m 3 in 1986 to 9.4 × 10 8 m 3 in 1989, community composition shifted from clupeids to centrarchids (70%). Fish densities dropped from an estimated 1,260 fish/ha in 1986 to 17 fish/ha in 1989, and biomass dropped from 116 to 73 kg/ha. Declines were attributed to higher operational velocities, associated scour, deprivation, and predation. Although initial populations adjusted downward to planned operational conditions, the fish community continued to represent a potentially valuable, but as yet unused, resource.

Arizona↗

Suspended sediment and fisheries: An exploration of empirical relationships

Objective: Sediment has an important role in aquatic ecosystems, however, excess sediment can negatively impact fish and other aquatic life. Quantifying the response of aquatic life, particularly fish, to suspended sediment is important for natural resource managers tasked with developing sediment management guidelines to protect aquatic ecosystems. Our goal was to assess the ability of established, revised, and alternate severity of ill effect (SEV) dose-response models to predict the impact of suspended sediment on fish. Methods: We synthesized existing literature to develop an expansive dataset that relates suspended sediment concentration and exposure duration to biological effects on fishes and assessed the predictive ability of established and revised SEV dose-response models. We investigated potential sources of variation in biological responses to suspended sediment dose and explored two alternative approaches for assessing the effects of suspended sediment on fish: 90th quantile SEV dose-response regression models and logistic SEV dose-response models. Results: We found that both established and revised linear SEV dose-response models poorly quantify fish biological response to suspended sediment. Quantile SEV dose-response regressions also performed poorly. More promising are logistic dose-response models that identify sediment thresholds where major effects of sediment on fish can be expected to occur. We demonstrate that fish biological response to suspended sediment is modulated by sediment particle size, water temperature, and dissolved oxygen levels, suggesting additional environmental and biological variables to consider when evaluating the effects of suspended sediment on fish. Conclusion: We contribute revised and novel empirically derived tools for predicting the effects of suspended sediment on fish and demonstrate how environmental variables and life stage may modulate fish biological response. Our work illustrates challenges associated with predictive modeling and some potential sources of variation. While empirical models integrating biological stress response to suspended sediment may help natural resource managers capture potential impacts of this stressor, a cautious approach that considers co-acting stressors may be most effective for sediment management that is protective of fish.

North American Journal of Fisheries Management↗

Development of a SWAT+ model to improve conservation practice efficacy for protecting stream health in karst pasturelands

Placing appropriate conservation practices in critical source areas of pollutants can benefit stream health in karst environments susceptible to agricultural pollution. Watershed models, such as the Soil and Water Assessment Tool+ (SWAT+), can optimize both practice selection and placement across the landscape, but to our knowledge no studies have tested this model in karst pasturelands. Our goal was to understand pollutant dynamics in pasturelands with karst topography in southwest Virginia, United States. We built a SWAT+ model to predict streamflow and pollutant loads for four watersheds. SWAT+ predicted that streamflow estimates were most affected by setting the available water capacity to zero and increasing the hydraulic conductivity of the soil, revealing that water, and associated pollutants, move primarily through subsurface pathways. Predicted sediment yield was negatively associated with agricultural land cover and was strongly influenced by channel erodibility—indicating that the predominant sediment source may be streambanks. Therefore, practices that stabilize stream banks (e.g., fencing cattle out of streams) may be most effective at reducing sediment loads. The model unsatisfactorily predicted total nitrogen and total phosphorus loads. The utility of SWAT+ for cattle grazing operations in karst regions could be improved by more accurately representing the effects of cattle grazing on streambank erosion and the dynamic subsurface movement of pollutants.

Virginia↗

Seasonal diet and habitat use of large, introduced Rainbow Trout in an Ozark Highland stream

Stocking of Rainbow Trout Oncorhynchus mykiss commonly provides seasonal or mitigation fisheries; however, these fish are usually small and ecosystem effects are spatially or temporally limited. Yet agencies receive requests to stock Rainbow Trout in relatively natural settings (i.e., not tailwater or mitigation fisheries), where introductions may have greater ecosystem consequences. The size of introduced fish is an important factor in determining biotic interactions with native species; therefore, our objectives were to assess the seasonal feeding ecology and microhabitat use of large (265–530 mm TL) nonnative Emmerson strain Rainbow Trout in a relatively unaltered, groundwater-influenced, warmwater stream of the Ozark Highlands. Rainbow Trout consumed a variety of prey; however, diets differed between cool (winter and spring) and warm (summer) seasons. Cool-season Rainbow Trout exhibited a mixed feeding strategy, with individual specialization on crayfishes and fishes and generalist feeding on Ephemeroptera and Diptera, but Gastropoda were the dominant prey. Feeding strategy in the warm season switched to individual specialization on numerous prey types. Overall, larger prey resources were important components of Rainbow Trout diets. Piscivory was relatively high in both seasons, and crayfishes were one of the most important prey types across seasons. Selection of coarse substrates and deeper-water microhabitats (>0.95 m) was similar between seasons. Rainbow Trout selected the lowest-velocity microhabitats available during the warm season and moderate velocities in the cool season. Rainbow Trout were five times more likely to be associated with cover in the warm season. Due to their higher temperature tolerance, Emmerson strain Rainbow Trout may persist in Ozark Highland streams, where they disrupt local food webs and occupy habitat otherwise selected by native fish, such as Neosho Smallmouth Bass Micropterus dolomieu velox . If native species conservation is a priority for agencies, then caution regarding Rainbow Trout stockings may be warranted.

Arkansas, Oklahoma↗

Land management impacts on dairy-derived dissolved organic carbon in ground water

Dairy operations have the potential to elevate dissolved organic carbon (DOC) levels in ground water, where it may interact with organic and inorganic contaminants, fuel denitrification, and may present problems for drinking water treatment. Total and percent bioavailable DOC and total and carbon-specific trihalomethane (THM) formation potential (TTHMFP and STHMFP, respectively) were determined for shallow ground water samples from beneath a dairy farm in the San Joaquin Valley, California. Sixteen wells influenced by specific land management areas were sampled over 3 yr. Measured DOC concentrations were significantly elevated over the background as measured at an upgradient monitoring well, ranging from 13 to 55 mg L-1 in wells downgradient from wastewater ponds, 8 to 30 mg L-1 in corral wells, 5 to 12 mg L-1 in tile drains, and 4 to 15 mg L-1 in wells associated with manured fields. These DOC concentrations were at the upper range or greatly exceeded concentrations in most surface water bodies used as drinking water sources in California. DOC concentrations in individual wells varied by up to a factor of two over the duration of this study, indicating a dynamic system of sources and degradation. DOC bioavailability over 21 d ranged from 3 to 10%, comparable to surface water systems and demonstrating the potential for dairy-derived DOC to influence dissolved oxygen concentrations (nearly all wells were hypoxic to anoxic) and denitrification. TTHMFP measurements across all management units ranged from 141 to 1731 ??g L-1, well in excess of the maximum contaminant level of 80 ??g L-1 established by the Environmental Protection Agency. STHMFP measurements demonstrated over twofold variation (???4 to ???8 mmol total THM/mol DOC) across the management areas, indicating the dependence of reactivity on DOC composition. The results indicate that land management strongly controls the quantity and quality of DOC to reach shallow ground water and hence should be considered when managing ground water resources and in any efforts to mitigate contamination of ground water with carbon-based contaminants, such as pesticides and pharmaceuticals. Copyright ?? 2008 by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America. All rights reserved.

Journal of Environmental Quality↗

Rare earth element-mineralized carbonatite in the Bear Lodge Alkaline Complex, USA—Ore genesis implications from fluid inclusion characterization

Rare earth element (REE) resources of the Bear Lodge Alkaline Complex, Wyoming, are hosted in variably leached carbonatite spatially related to diatreme breccia pipes. We investigated the genesis of REE and lesser-known gold resources through fluid inclusion analysis of carbonatite, fluorite breccia, and smoky quartz vein samples. Physicochemical characteristics of inclusion-trapped fluids were evaluated using petrography, microthermometry, Raman spectroscopy, decrepitate mound analysis, energy-dispersive spectroscopy, laser ablation inductively coupled plasma mass spectrometry, and noble gas isotope analysis. Microthermometry results reveal three fluid types that affected carbonatite dikes within deeper zones that escaped near-surface, ore-grade REE enrichment: (1) high-temperature (330–432°C) magmatic fluid captured in fine-grained calcite; (2) REE-enriched alkali bicarbonate-sulfate brine; and (3) low-temperature (117–182°C) diluted magmatic or meteoric water. Multiphase brine-like inclusions contain burbankite, nahcolite, strontianite, celestine and alkali sulfate daughter crystals, linking them to early burbankite mineralization. Peripheral smoky quartz and fluorite occurrences at Smith Ridge, 1.5 km from the central carbonatite dike swarm, contain primary inclusions that are Cl-poor and rich in Na-HCO 3 -SO 4 , similar to secondary and pseudosecondary inclusions in carbonatites. Helium isotopes reveal a MORB-like source for carbonatite samples and an older crust signature at Smith Ridge, consistent with the proximal ridge-top exposures of Archean granite. Results from this fluid inclusion study coupled with previous studies of carbonatite mineral paragenesis, show that light REEs (LREEs) were not mobilized great distances. Instead, burbankite crystallized within carbonatite from alkali bicarbonate fluids. With sodium retained in early burbankite, outward-emanating fluids enriched in potassium relative to sodium (higher K:Na) resulted in potassium–ferric iron metasomatism of silicate host rocks. This alkali fractionation was accompanied by fractionation of LREEs and heavy REEs (HREEs), with LREEs dominating the central carbonatite resources. In contrast, areas of peripheral REE mineralization at Bear Lodge are commonly characterized by higher HREE:LREE ratios. The K:Na ratio of associated fenites or alteration assemblages could be indicative of early crystallized burbankite in carbonatites and REE fractionation processes potentially leading to areas of concentrated HREEs with greater supply vulnerabilities.

South Dakota, Wyoming↗

Water resource development and management

In a sandy, riverside location in Wisconsin, my family has a farm, once abandoned by a previous owner because it would not produce much corn. By the time we bought it – for a pittance – only a few remnants of white pine remained from the magnificent stands made famous by the Paul Bunyan legend. In this part of Wisconsin the pines were, even originally, restricted only to patches of the better soil, and the variability of the glacial topography has resulted in an interesting mixture of prairie marsh, swamp woodlot, and sand hill. We did not acquire this farm because it had great potential for growing crops. Rather we were interested in the variety of ecologic and topographic types, which, even within the confines of our property, represented a condensed version of the many different types of land in the Wisconsin countryside. The farm also has a very peculiar aesthetic and historical interest. Marquette’s canoes once slipped quietly past our favorite fishing hole on the river; passenger pigeons once roosted in our great oaks; and the few remaining white pines silhouetted against the sky-glow of evening made one think of the Round River and the Blue Ox.

Journal of the American Water Works Association↗

Growth of hatchery‐reared chinook salmon in Lakes Michigan and Huron exhibits limited spatial variation but Is temporally linked to alewife abundance

Chinook Salmon Oncorhynchus tshawytscha were introduced into Lakes Michigan and Huron in the 1960s to diversify recreational fisheries and reduce overabundant, nonnative Alewife Alosa pseudoharengus. Alewife remain the primary prey of Chinook Salmon but have experienced substantial declines in abundance due to reduced food resources and salmonine predation pressure. The movements of Chinook Salmon have been linked to the density and spatial distribution of Alewife, but spatial patterns in Chinook Salmon growth have not been well documented and the temporal relationship between growth and Alewife density has not been evaluated during the current period of low Alewife abundance. We evaluated spatial and temporal variation in growth of Chinook Salmon in Lake Michigan and the U.S. waters of Lake Huron and explored linkages with Alewife density. Von Bertalanffy growth parameters were generally similar for recaptured coded‐wire‐tagged Chinook Salmon from different stocking locations and different recovery locations. Only a few small differences among stocking and recovery regions were evident, with regions divided into two subtly different groups with shared growth parameters. The small regional differences may be attributable to unique habitat and/or stocking characteristics of specific regions. In Lake Michigan average Chinook Salmon length at age also varied across years and was tightly coupled with annual lakewide densities of age‐1 and older Alewife, suggesting that Chinook Salmon growth from 2012 to 2016 was constrained by Alewife density. Our findings are consistent with evidence of lakewide movements associated with foraging and support continued management of Chinook Salmon in Lake Michigan as a single population. Furthermore, similar growth in Chinook Salmon from Lakes Michigan and Huron corroborates evidence that Chinook Salmon move from U.S. waters of Lake Huron to Lake Michigan to feed and reinforces the recent decision to include most fish stocked in northwestern Lake Huron in the Lake Michigan population when managing for predator–prey balance.

Lake Michigan, Lake Huron↗

Changes in growth and maturity of walleyes associated with stock rehabilitation in western Lake Erie, 1964-1983

The precipitous decline in abundance of walleyes (Stizostedion vitreum vitreum) in western Lake Erie during the 1960s caused major concerns for the future of this resource. Mercury contamination in walleyes in 1970 resulted in a moratorium on commercial fishing in United States and Canadian waters. The opportunity arose for resource agencies to develop a plan for rehabilitation of the walleye stocks, and quota management for walleyes was begun in 1976. After 8 years, the resource had recovered dramatically and the estimated standing stock in 1983 was more than three times that in 1976. In the mid-1970s, however, certain detrimental changes suggested that self-regulatory mechanisms were occurring. The growth rate declined gradually but rather consistently. Growth changes were most evident for young-of-the-year (YOY), yearlings, and 2-year-old fish, which usually constituted more than 80% of the standing stock in 1976-1983. Average lengths of YOY fish decreased by nearly 50 mm (from about 240 mm in 1961 to 190 mm in 1983). Average lengths and weights of yearling and older fish began to decline after 1975 and decreased markedly after 1980. Historically, growth of walleyes in western Lake Erie exceeded that reported for many walleye populations in other waters. Another sign of self-regulation was an increasing delay in the onset of maturity. Most (usually more than 90%) of the yearling males were sexually mature each fall before 1979, but this percentage decreased to only 32 by fall 1983. Usually 80% or more of the age-II females were mature each fall during the 1960s and early 1970s, but this percentage decreased rapidly to only 7 by fall 1983. Prey fish populations declined somewhat in the early 1980s, and their ability to sustain the high abundance of walleyes is a great concern to resource managers.

North American Journal of Fisheries Management↗

Predicting pup-rearing habitat for Mexican wolves

Population monitoring is essential to document recovery efforts for threatened and endangered species. Mexican wolves ( Canis lupus baileyi ) are an endangered subspecies of gray wolves that historically occupied large portions of the American Southwest and Mexico. Recently, the Mexican wolf population in the United States has been growing rapidly and traditional approaches for population monitoring (e.g., capture and radio collaring) are becoming difficult and expensive as wolves expand into new areas. We developed predictive models of pup-rearing habitat (i.e., den and rendezvous sites) that could help guide future population monitoring efforts. We located 255 den sites and 129 rendezvous sites in Arizona and New Mexico, USA (1998–2023) using tracking collars and site visits. We sampled habitat conditions in wolf-occupied regions of Arizona and New Mexico and fit logistic regressions to these data following a use–available study design to estimate resource selection functions (RSF) for den and rendezvous sites. We hypothesized wolves would select areas that offered greater physical protection, lower human-disturbance, and access to reliable water sources for pup-rearing but that the relative importance of these features would differ between the denning and rendezvous site seasons. Mexican wolves selected den sites at higher elevations in steeper and rougher terrain that were closer to permanent waterbodies but farther from rural roads. Selection of rendezvous sites was also associated with higher elevations and proximity to waterbodies but varied with availability of green leaf biomass on the landscape. While still highly predictive, our rendezvous site model was less predictive than our den model (Spearman's correlation averaged 0.81 [SE = 0.05] vs. 0.90 [SE = 0.03], respectively), possibly because water and green leaf biomass are more spatially diffuse and variable because of monsoonal rains during the rendezvous site season. Our results suggest that terrain features associated with physical protection and access to reliable water were most important in characterizing suitable pup-rearing habitat for Mexican wolves. By predicting suitable den and rendezvous site habitat across portions of the Mexican Wolf Experimental Population Area, our models can help guide future population monitoring by reducing the total search area when surveying for wolves and increase the probability of detecting all members of a pack.

Arizona, New Mexico↗

Physiological response of some economically important freshwater salmonids to catch-and-release fishing

Catch-and-release fishing regulations are widely used by fishery resource managers to maintain both the quantity and quality of sport fish populations. We evaluated blood chemistry disturbances in wild brook trout Salvelinus fontinalis, brown trout Salmo trutta, cutthroat trout Oncorhynchus clarkii, and Arctic grayling Thymallus arcticus that had been hooked and played for 1-5 min in waters of the intermountain western United States. A hatchery stock of brown trout was included for comparison. To assess time needed for recovery, additional test groups were played for 5 min and then released into net-pens, where they were held for up to 72 h. The osmoregulatory and metabolic disturbances associated with catch-and-release fishing under the conditions we tested were minimal and judged to be well within normal physiological tolerance limits. In fish that were held for recovery, the blood chemistry alterations that did occur appeared to be related to stress from confinement in the net-pens. Our results confirm the results of previous studies, showing that prerelease air exposure and handling cause more physiological stress than does either hooking per se or playing time. Fishery managers must be aware of the differences in the perceptions, attitudes, and values of different societal groups, some of which feel that catch-and-release fishing should be banned because it is cruel to the animals. On the basis of brain anatomy, it seems highly unlikely that fish experience pain in the same manner as humans experience it, because fish lack a neocortex, the brain structure that enables the sensation of pain in higher vertebrates. However, independent of the neurobiological argument, our results indicate that under conditions similar to those tested, fish subjected to catch and release are neither suffering nor particularly stressed. Improved education programs about the relatively benign physiological effects of catch-and-release fishing as a fishery management practice would be beneficial to anglers and the nonfishing public alike.

North American Journal of Fisheries Management↗