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USGS2015

Spatial scaling patterns and functional redundancies in a changing boreal lake landscape

Global transformations extend beyond local habitats; therefore, larger-scale approaches are needed to assess community-level responses and resilience to unfolding environmental changes. Using longterm data (1996–2011), we evaluated spatial patterns and functional redundancies in the littoral invertebrate communities of 85 Swedish lakes, with the objective of assessing their potential resilience to environmental change at regional scales (that is, spatial resilience). Multivariate spatial modeling was used to differentiate groups of invertebrate species exhibiting spatial patterns in composition and abundance (that is, deterministic species) from those lacking spatial patterns (that is, stochastic species). We then determined the functional feeding attributes of the deterministic and stochastic invertebrate species, to infer resilience. Between one and three distinct spatial patterns in invertebrate composition and abundance were identified in approximately one-third of the species; the remainder were stochastic. We observed substantial differences in metrics between deterministic and stochastic species. Functional richness and diversity decreased over time in the deterministic group, suggesting a loss of resilience in regional invertebrate communities. However, taxon richness and redundancy increased monotonically in the stochastic group, indicating the capacity of regional invertebrate communities to adapt to change. Our results suggest that a refined picture of spatial resilience emerges if patterns of both the deterministic and stochastic species are accounted for. Spatially extensive monitoring may help increase our mechanistic understanding of community-level responses and resilience to regional environmental change, insights that are critical for developing management and conservation agendas in this current period of rapid environmental transformation.

Ecosystems↗

USGS2007

USGS Reference Materials Program: Serving the Needs of the Global Analytical Community

Every year in the United States, millions of measurements are made on the chemical composition of items that affect us on a daily basis. The accuracy of these measurements is routinely determined by the analysis of appropriate reference materials. In the field of earth science, reference materials are particularly important because they help us develop a better understanding of the processes that have shaped, and continue to shape the world around us. USGS reference materials are distributed internationally to organizations involved in geochemical and environmental analysis, instrumentation and methods development, and industrial research and quality assurance. Reference materials are widely used in the development and validation of geochemical models used by the USGS.

Fact Sheet↗

USGS1998

Development and testing of a contamination potential mapping system for a portion of the General Separations Area, Savannah River Site, South Carolina

A methodology was developed to evaluate and map the contamination potential or aquifer sensitivity of the upper groundwater flow system of a portion of the General Separations Area (GSA) at the Department of Energy's Savannah River Site (SRS) in South Carolina. A Geographic Information System (GIS) was used to integrate diverse subsurface geologic data, soils data, and hydrology utilizing a stack-unit mapping approach to construct mapping layers. This is the first time that such an approach has been used to delineate the hydrogeology of a coastal plain environment. Unit surface elevation maps were constructed for the tops of six Tertiary units derived from over 200 boring logs. Thickness or isopach maps were created for five hydrogeologic units by differencing top and basal surface elevations. The geologic stack-unit map was created by stacking the five isopach maps and adding codes for each stack-unit polygon. Stacked-units were rated according to their hydrogeologic properties and ranked using a logarithmic approach (utility theory) to establish a contamination potential index. Colors were assigned to help display relative importance of stacked-units in preventing or promoting transport of contaminants. The sensitivity assessment included the effects of surface soils on contaminants which are particularly important for evaluating potential effects from surface spills. Hydrogeologic/hydrologic factors did not exhibit sufficient spatial variation to warrant incorporation into contamination potential assessment. Development of this contamination potential mapping system provides a useful tool for site planners, environmental scientists, and regulatory agencies.A methodology was developed to evaluate and map the contamination potential or aquifer sensitivity of the upper groundwater flow system of a portion of the General Separations Area (GSA) at the Department of Energy's Savannah River Site (SRS) in South Carolina. A Geographic Information System (GIS) was used to integrate diverse subsurface geologic data, soils data, and hydrology utilizing a stack-unit mapping approach to construct mapping layers. This is the first time that such an approach has been used to delineate the hydrogeology of a coastal plain environment. Unit surface elevation maps were constructed for the tops of six Tertiary units derived from over 200 boring logs. Thickness or isopach maps were created for five hydrogeologic units by differencing top and basal surface elevations. The geologic stack-unit map was created by stacking the five isopach maps and adding codes for each stack-unit polygon. Stacked-units were rated according to their hydrogeologic properties and ranked using a logarithmic approach (utility theory) to establish a contamination potential index. Colors were assigned to help display relative importance of stacked-units in preventing or promoting transport of contaminants. The sensitivity assessment included the effects of surface soils on contaminants which are particularly important for evaluating potential effects from surface spills. Hydrogeologic/hydrologic factors did not exhibit sufficient spatial variation to warrant incorporation into contamination potential assessment. Development of this contamination potential mapping system provides a useful tool for site planners, environmental scientists, and regulatory agencies.

South Carolina↗

USGS2017

Environmental signatures and effects of an oil and gas wastewater spill in the Williston Basin, North Dakota

Wastewaters from oil and gas development pose largely unknown risks to environmental resources. In January 2015, 11.4 M L (million liters) of wastewater (300 g/L TDS) from oil production in the Williston Basin was reported to have leaked from a pipeline, spilling into Blacktail Creek, North Dakota. Geochemical and biological samples were collected in February and June 2015 to identify geochemical signatures of spilled wastewaters as well as biological responses along a 44-km river reach. February water samples had elevated chloride (1030 mg/L) and bromide (7.8 mg/L) downstream from the spill, compared to upstream levels (11 mg/L and < 0.4 mg/L, respectively). Lithium (0.25 mg/L), boron (1.75 mg/L) and strontium (7.1 mg/L) were present downstream at 5–10 times upstream concentrations. Light hydrocarbon measurements indicated a persistent thermogenic source of methane in the stream. Semi-volatile hydrocarbons indicative of oil were not detected in filtered samples but low levels, including tetramethylbenzenes and di-methylnaphthalenes, were detected in unfiltered water samples downstream from the spill. Labile sediment-bound barium and strontium concentrations (June 2015) were higher downstream from the Spill Site. Radium activities in sediment downstream from the Spill Site were up to 15 times the upstream activities and, combined with Sr isotope ratios, suggest contributions from the pipeline fluid and support the conclusion that elevated concentrations in Blacktail Creek water are from the leaking pipeline. Results from June 2015 demonstrate the persistence of wastewater effects in Blacktail Creek several months after remediation efforts started. Aquatic health effects were observed in June 2015; fish bioassays showed only 2.5% survival at 7.1 km downstream from the spill compared to 89% at the upstream reference site. Additional potential biological impacts were indicated by estrogenic inhibition in downstream waters. Our findings demonstrate that environmental signatures from wastewater spills are persistent and create the potential for long-term environmental health effects.

North Dakota↗

USGS2025

Development of genomic markers for monitoring and research on plethodontid salamanders

Despite the importance of plethodontid salamanders and their vulnerability to ongoing environmental change, they are inherently difficult to monitor due to their cryptic nature. Recent advances in genomics have created new opportunities for monitoring of populations and their responses to environmental perturbations. In this study, we developed a new target capture-based genomic panel for the purposes of genetic monitoring in plethodontid salamanders. We demonstrate its utility in several distantly related species and present an example application in two representative species with co-occurring distributions but different ecological attributes and expected patterns of population structure: Plethodon jordani and Desmognathus wrighti . Although the number of successfully assembled loci declined with phylogenetic distance from the original reference species ( Desmognathus spp), we obtained high-quality data from thousands of loci from species in all four genera tested ( Desmognathus , Plethodon , Eurycea , and Gyrinophilus ), which span the deepest split in Plethodontidae. Landscape genetic analyses detected weak but statistically significant geographic structure in P. jordani , and much stronger geographic structure in D. wrighti , as expected based on the lower population density and likely lower dispersal ability of D. wrighti . Our target capture panel is broadly applicable across salamanders in Plethodontidae and has the potential to provide data for a wide range of phylogenetic, biogeographic, and population genetics research questions.

North Carolina, Tennessee↗

USGS1982

Susitna Hydroelectric Project: terrestrial environmental workshop and preliminary simulation model

The technical feasibility, economic viability, and environmental impacts of a hydroelectric development project in the Susitna River Basin are being studied by Acres American, Inc. on behalf of the Alaska Power Authority. As part of these studies, Acres American recently contracted LGL Alaska Research Associates, Inc. to coordinate the terrestrial environmental studies being performed by the Alaska Department of Fish and Game and, as subcontractors to LGL, several University of Alaska research groups. LGL is responsible for further quantifying the potential impacts of the project on terrestrial wildlife and vegetation, and for developing a plan to mitigate adverse impacts on the terrestrial environment. The impact assessment and mitigation plan will be included as part of a license application to the Federal Energy Regulatory Commission (FERC) scheduled for the first quarter of 1983. The quantification of impacts, mitigation planning, and design of future research is being organized using a computer simulation modelling approach. Through a series of workshops attended by researchers, resource managers, and policy-makers, a computer model is being developed and refined for use in the quantification of impacts on terrestrial wildlife and vegetation, and for evaluating different mitigation measures such as habitat enhancement and the designation of replacement lands to be managed by wildlife habitat. This report describes the preliminary model developed at the first workshop held August 23 -27, 1982 in Anchorage.

Report↗

USGS1995

Mineral resources, environmental issues, and land use

Contrary to predictions from the 1950s through the mid-1980s, persistent shortages of nonfuel minerals have not occurred, despite prodigious consumption, and world reserves have increased. Global availability of raw materials is relevant to policy decisions regarding mineral development and land use. Justification for environmental protection may exceed that for mining a specific ore body. Demand for environmental accountability is rising worldwide, and new technologies are enabling internalization of costs. Mineral-rich developing nations plagued by inefficient state-owned mining enterprises, high population growth rates, and environmental degradation could realize substantial benefit by reforming government policies to encourage foreign investment in resources and by appropriate allocation of mineral rents.

Science↗

USGS2025

Decision framing overview and performance of management alternatives for bison and elk feedground management at the National Elk Refuge in Jackson, Wyoming

This report was developed to evaluate the performance of a set of proposed alternatives for Cervus elaphus canadensis (elk) and Bison bison (bison) management at the National Elk Refuge in Wyoming, U.S.A., and to inform a National Environmental Policy Act Environmental Impact Statement focused on developing the next “Bison and Elk Management Plan” (BEMP). The U.S. Geological Survey facilitated a structured decision-making process for the U.S. Fish and Wildlife Service to develop the alternatives and the criteria (performance metrics) for evaluating the alternatives. Chapter A (this chapter) provides scoping details of the “BEMP”, a summary of the 19 metrics that are used to evaluate the performance of each of 5 alternatives, and methodological details of 2 performance metrics that were not covered in other technical chapters. Additional technical details, results, and interpretations are briefly covered in this chapter, but are mostly contained in chapters B–E.

Wyoming↗

USGS2025

Decision framing overview and performance of management alternatives for bison and elk feedground management at the National Elk Refuge in Jackson, Wyoming

This report was developed to evaluate the performance of a set of proposed alternatives for Cervus elaphus canadensis (elk) and Bison bison (bison) management at the National Elk Refuge in Wyoming, U.S.A., and to inform a National Environmental Policy Act Environmental Impact Statement focused on developing the next “Bison and Elk Management Plan” (BEMP). The U.S. Geological Survey facilitated a structured decision-making process for the U.S. Fish and Wildlife Service to develop the alternatives and the criteria (performance metrics) for evaluating the alternatives. Chapter A (this chapter) provides scoping details of the “BEMP,” a summary of the 19 metrics used to evaluate the performance of each of the 6 alternatives, and methodological details of 2 performance metrics that were not covered in other technical chapters. Additional technical details, results, and interpretations are briefly covered in this chapter but are mostly contained in chapters B–F.

Wyoming↗

USGS2006

Response of Everglades tree islands to environmental change

Tree islands are centers of biodiversity within the Florida Everglades, USA, but the factors controlling their distribution, formation, and development are poorly understood. We use pollen assemblages from tree islands throughout the greater Everglades ecosystem to reconstruct the timing of tree island formation, patterns of development, and response to specific climatic and environmental stressors. These data indicate that fixed (teardrop-shaped) and strand tree islands developed well before substantial human alteration of the system, with initial tree island vegetation in place between 3500 and 500 calibrated years before present (cal yr BP), depending on the location in the Everglades wetland. Tree island development appears to have been triggered by regional- to global-scale climatic events at 2800 cal yr BP, 1600–1500 cal yr BP, 1200–1000 cal yr BP (early Medieval Warm Period), and 500–200 cal yr BP (Little Ice Age). These periods correspond to drought intervals documented in Central and South America and periods of southward displacement of the Intertropical Convergence Zone. The records indicate a coherence of climate patterns in both subtropical North America and the Northern Hemisphere Neotropics. Water management practices of the 20th century altered plant communities and size of tree islands throughout the Everglades. Responses range from loss of tree islands due to artificially long hydroperiods and deep water to expansion of tree islands after flow reductions. These data provide evidence for the rapidity of tree island response to specific hydrologic change and facilitate prediction of the response to future changes associated with Everglades restoration plans.

Florida↗

USGS2025

Decision analysis in support of the National Elk Refuge bison and elk management plan

Preface This report was developed to evaluate the performance of a set of proposed alternatives for Cervus elaphus canadensis (elk) and Bison bison (bison) management at the National Elk Refuge (NER) in Wyoming, U.S.A., and to inform a National Environmental Policy Act Environmental Impact Statement focused on developing the next “Bison and Elk Management Plan” (BEMP). The U.S. Geological Survey facilitated a structured decision-making process for the U.S. Fish and Wildlife Service to develop the alternatives and the criteria (performance metrics) for evaluating the alternatives. Chapter A provides scoping details of the report, a summary of the 19 metrics that are used to evaluate the performance of each of 5 alternatives, and methodological details of 2 performance metrics that were not covered in other technical chapters. Chapter B analyzes elk population and chronic wasting disease dynamics under the five alternatives. Chapter C evaluates elk space-use based on data collected from global positioning system collars on elk and expert elicitation for scenarios with limited data. Chapter D evaluates bison population dynamics, conflict, and harvest patterns under the five alternatives. Chapter E assesses social and economic consequences. The alternatives are anticipated to have varying affects on bison and elk population abundance and private land use, wildlife-related recreation and tourism, and hunters and outfitters in the region. Each chapter was developed under advisement of a technical team, made up science experts from U.S. Fish and Wildlife Service, National Park Service, U.S. Forest Service, and Wyoming Game and Fish Department.

Scientific Investigations Report↗

USGS2025

Decision analysis in support of the National Elk Refuge bison and elk management plan

Preface This report was developed to evaluate the performance of a set of proposed alternatives for Cervus elaphus canadensis (elk) and Bison bison (bison) management at the National Elk Refuge (NER) in Wyoming, U.S.A., and to inform a National Environmental Policy Act Environmental Impact Statement focused on developing the next “Bison and Elk Management Plan” (BEMP). The U.S. Geological Survey facilitated a structured decision-making process for the U.S. Fish and Wildlife Service to develop the alternatives and the criteria (performance metrics) for evaluating the alternatives. Chapter A provides scoping details of the report, a summary of the 19 metrics that are used to evaluate the performance of each of 6 alternatives, and methodological details of 2 performance metrics that were not covered in other technical chapters. Chapter B analyzes elk population and chronic wasting disease dynamics under the five initial alternatives. Chapter C evaluates elk space-use based on data collected from global positioning system collars on elk and expert elicitation for scenarios with limited data. Chapter D evaluates bison population dynamics, conflict, and harvest patterns under the five initial alternatives. Chapter E assesses social and economic consequences. Chapter F is newly added to this superseding report and details the analysis and results of a new alternative that was developed after discussion among the lead and cooperating agencies working on the BEMP. The full set of six alternatives are anticipated to have varying affects on bison and elk population abundance and private land use, wildlife-related recreation and tourism, and hunters and outfitters in the region. Each chapter was developed under advisement of a technical team, made up science experts from U.S. Fish and Wildlife Service, National Park Service, U.S. Forest Service, and Wyoming Game and Fish Department.

Wyoming↗

USGS2008

Streamflow characteristics of streams in the Helmand Basin, Afghanistan

A majority of the Afghan population lacks adequate and safe supplies of water because of contamination, lack of water-resources management regulation, and lack of basic infrastructure, compounded by periods of drought and seasonal flooding. Characteristics of historical streamflows are needed to assist with efforts to quantify the water resources of the Helmand Basin. The Helmand Basin is the largest river basin in Afghanistan. It comprises the southern half of the country, draining waters from the Sia Koh Mountains in Herat Province to the eastern mountains in Gardez Province (currently known as the Paktia Province) and the Parwan Mountains northwest of Kabul, and finally draining into the unique Sistan depression between Iran and Afghanistan (Favre and Kamal, 2004). The Helmand Basin is a desert environment with rivers fed by melting snow from the high mountains and infrequent storms. Great fluctuations in streamflow, from flood to drought, can occur annually. Knowledge of the magnitude and time distribution of streamflow is needed to quantify water resources and for water management and environmental planning. Agencies responsible for the development and management of Afghanistan's surface-water resources can use this knowledge for making safe, economical, and environmentally sound water-resource planning decisions. To provide the Afghan managers with necessary streamflow information, the U.S. Geological Survey (USGS), in cooperation with the U.S. Agency for International Development (USAID), computed streamflow statistics for data collected at historical gaging stations within the Helmand Basin. The historical gaging stations used are shown in figure 1 and listed in table 1.

Helmand Basin↗

USGS2025

Looking for Lazarus: Environmental DNA (eDNA) surveillance of the federally threatened Slender Chub (Erimystax cahini) in the Clinch and Powell Rivers

Erimystax cahni (Slender Chub) is a federally threatened fish native to the Powell, Clinch, and lower Holston rivers of Tennessee and Virginia. No individuals have been captured or reported for over 2 decades. We developed a species-specific environmental DNA (eDNA) assay to survey for its presence throughout its native distribution in new and historical sites. We detected Slender Chub eDNA in both the Powell and Clinch rivers in 3 of 43 sites sampled during summer 2022. The presence of live individuals could not be confirmed, and the detection of positive eDNA matches could result from pure individuals or hybrids. Note that positive eDNA matches do not preclude the presence of hybrid individuals; however, they can help guide managers to intensively sample areas with conventional methods (e.g., snorkeling and seining), which could improve the probability of capture of living individuals.

Kentucky, Tennessee↗

USGS1996

Development of cytochromes P450 in avian species as a biomarker for environmental contaminant exposure and effect: Procedures and baseline values

As in mammals and fish, birds respond to many environmental contaminants with induction of hepatic cytochromes P450. In order to monitor cytchromes P450 in specific avian species, for assessing the status of that species or the habitat it utilizes, it is necessary to have background information on the appropriate assay conditions and the responsiveness of cytochrome P450 induction in that species. Assay of four monooxygenases which give resorufin as product using a fluorescence microwell plate scanner has proven to be an effective approach. Information is provided on the incubation conditions and baseline activity for twenty avian species at ages ranging from pipping embryo to adult. Induction responsiveness is presented for sixteen of them. This information can serve as a guide for those who wish to utilize cytochrome P450 as a biomarker for contaminant exposure and effect to aid in selection of appropriate species, age, and monooxygenase assay(s).

Book chapter↗

USGS2009

SToRM: A numerical model for environmental surface flows

SToRM (System for Transport and River Modeling) is a numerical model developed to simulate free surface flows in complex environmental domains. It is based on the depth-averaged St. Venant equations, which are discretized using unstructured upwind finite volume methods, and contains both steady and unsteady solution techniques. This article provides a brief description of the numerical approach selected to discretize the governing equations in space and time, including important aspects of solving natural environmental flows, such as the wetting and drying algorithm. The presentation is illustrated with several application examples, covering both laboratory and natural river flow cases, which show the model’s ability to solve complex flow phenomena.

Conference Paper↗

USGS2015

Avoidance of unconventional oil wells and roads exacerbates habitat loss for grassland birds in the North American great plains

Oil development in the Bakken shale region has increased rapidly as a result of new technologies and strong demand for fossil fuel. This region also supports a particularly high density and diversity of grassland bird species, which are declining across North America. We examined grassland bird response to unconventional oil extraction sites (i.e. developed with hydraulic fracturing and horizontal drilling techniques) and associated roads in North Dakota. Our goal was to quantify the amount of habitat that was indirectly degraded by oil development, as evidenced by patterns of avoidance by birds. Grassland birds avoided areas within 150 m of roads (95% CI: 87–214 m), 267 m of single-bore well pads (95% CI: 157–378 m), and 150 m of multi-bore well pads (95% CI: 67–233 m). Individual species demonstrated variable tolerance of well pads. Clay-colored sparrows ( Spizella pallida ) were tolerant of oil-related infrastructure, whereas Sprague's pipit ( Anthus spragueii ) avoided areas within 350 m (95% CI: 215–485 m) of single-bore well pads. Given these density patterns around oil wells, the potential footprint of any individual oil well, and oil development across the region, is greatly multiplied for sensitive species. Efforts to reduce new road construction, concentrate wells along developed corridors, combine numerous wells on multi-bore pads rather than build many single-bore wells, and to place well pads near existing roads will serve to minimize loss of suitable habitat for birds. Quantifying environmental degradation caused by oil development is a critical step in understanding how to better mitigate harm to wildlife populations.

Biological Conservation↗

USGS2010

Interpolating a consumption variable for scaling and generalizing potential population pressure on urbanizing natural areas

Measures of population pressure, referring in general to the stress upon the environment by human consumption of resources, are imperative for environmental sustainability studies and management. Development based on resource consumption is the predominant factor of population pressure. This paper presents a spatial model of population pressure by linking consumption associated with regional urbanism and ecosystem services. Maps representing relative geographic degree and extent of natural resource consumption and degree and extent of impacts on surrounding areas are new, and this research represents the theoretical research toward this goal. With development, such maps offer a visualization tool for planners of various services, amenities for people, and conservation planning for ecologist. Urbanization is commonly generalized by census numbers or impervious surface area. The potential geographical extent of urbanism encompasses the environmental resources of the surrounding region that sustain cities. This extent is interpolated using kriging of a variable based on population wealth data from the U.S. Census Bureau. When overlayed with land-use/land-cover data, the results indicate that the greatest estimates of population pressure fall within mixed forest areas. Mixed forest areas result from the spread of cedar woods in previously disturbed areas where further disturbance is then suppressed. Low density areas, such as suburbanization and abandoned farmland are characteristic of mixed forest areas.

Missouri↗