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USGS2014

Lidar point density analysis: implications for identifying water bodies

Most airborne topographic light detection and ranging (lidar) systems operate within the near-infrared spectrum. Laser pulses from these systems frequently are absorbed by water and therefore do not generate reflected returns on water bodies in the resulting void regions within the lidar point cloud. Thus, an analysis of lidar voids has implications for identifying water bodies. Data analysis techniques to detect reduced lidar return densities were evaluated for test sites in Blackhawk County, Iowa, and Beltrami County, Minnesota, to delineate contiguous areas that have few or no lidar returns. Results from this study indicated a 5-meter radius moving window with fewer than 23 returns (28 percent of the moving window) was sufficient for delineating void regions. Techniques to provide elevation values for void regions to flatten water features and to force channel flow in the downstream direction also are presented.

Scientific Investigations Report↗

USGS2026

Multireservoir allocation framework considering societal and ecological needs in a time-frequency domain

Existing reservoir management frameworks traditionally consider historical (predam) flow conditions to deliver environmental flows. Such frameworks may not be feasible because current demand and/or climate could be different from predam conditions. Hence, we developed a multireservoir framework that explicitly considers both human water demands and environmental flow requirements to minimize deviations under current hydroclimatic conditions and demand patterns. The multireservoir framework, Generalized Reservoir Analyses using Probabilistic Streamflow (GRAPS), was modified and implemented to solve the problem of minimizing the flow deviations using feasible sequential quadratic programming for three reservoirs in the Chattahoochee River Basin, Southeastern United States, which is known for its imperiled native biodiversity and productive estuarine ecosystem. Our results show that downstream reservoirs in the cascade system are less influenced by upstream reservoirs’ regulation because the downstream reservoirs receive a significant amount of natural flows. By comparing the average wavelet power spectrum at different periodicities between natural flows and downstream releases, we found that the current release policy and modified releases resulted in highly altered flows under shorter periodicities (e.g., less than 2 months) but synchronized flow variance between natural flow and downstream releases at longer periodicities (e.g., greater than 3 years). This framework of linking the multireservoir allocation model through the time–frequency analysis using wavelet power spectrum could not only advance sustainable water management policies to meet water for human and environmental needs but can also add additional value in meeting the downstream environmental demand at desired periodicities.

Alabama, Florida, Georgia↗

USGS2004

Inferring time‐varying recharge from inverse analysis of long‐term water levels

Water levels in aquifers typically vary in response to time‐varying rates of recharge, suggesting the possibility of inferring time‐varying recharge rates on the basis of long‐term water level records. Presumably, in the southwestern United States (Arizona, Nevada, New Mexico, southern California, and southern Utah), rates of mountain front recharge to alluvial aquifers depend on variations in precipitation rates due to known climate cycles such as the El Niño‐Southern Oscillation index and the Pacific Decadal Oscillation. This investigation examined the inverse application of a one‐dimensional analytical model for periodic flow described by Lloyd R. Townley in 1995 to estimate periodic recharge variations on the basis of variations in long‐term water level records using southwest aquifers as the case study. Time‐varying water level records at various locations along the flow line were obtained by simulation of forward models of synthetic basins with applied sinusoidal recharge of either a single period or composite of multiple periods of length similar to known climate cycles. Periodic water level components, reconstructed using singular spectrum analysis (SSA), were used to calibrate the analytical model to estimate each recharge component. The results demonstrated that periodic recharge estimates were most accurate in basins with nearly uniform transmissivity and the accuracy of the recharge estimates depends on monitoring well location. A case study of the San Pedro Basin, Arizona, is presented as an example of calibrating the analytical model to real data.

Water Resources Research↗

USGS1981

Water Resources Research October 1, 1979 - September 30, 1980: Summary statements of research activities by the Water Resources Division

Research in the WRD had its beginnings in the late 1950's when the "core research" line item was added to the Congressional budget. Since this time the Federal program has grown from a "basic sciences" program to one that includes a broad spectrum of basic and applied scientific investigations. Water resources research in WRD includes the study of water in all its phases and uses the basic sciences of mathematics, chemistry, physics, biology, geology and engineering to gain a fundamental understanding of the processes that affect the movement of water and its chemical constituents through hydrologic systems. The basic knowledge and methodologies derived from water resources research are applicable not only to the solution of current problems associated with the Nation's water resources, but also to anticipated hydrologic issues.

Report↗

USGS2008

Relationship between remotely-sensed vegetation indices, canopy attributes and plant physiological processes: What vegetation indices can and cannot tell us about the landscape

Vegetation indices (VIs) are among the oldest tools in remote sensing studies. Although many variations exist, most of them ratio the reflection of light in the red and NIR sections of the spectrum to separate the landscape into water, soil, and vegetation. Theoretical analyses and field studies have shown that VIs are near-linearly related to photosynthetically active radiation absorbed by a plant canopy, and therefore to light-dependent physiological processes, such as photosynthesis, occurring in the upper canopy. Practical studies have used time-series VIs to measure primary production and evapotranspiration, but these are limited in accuracy to that of the data used in ground truthing or calibrating the models used. VIs are also used to estimate a wide variety of other canopy attributes that are used in Soil-Vegetation-Atmosphere Transfer (SVAT), Surface Energy Balance (SEB), and Global Climate Models (GCM). These attributes include fractional vegetation cover, leaf area index, roughness lengths for turbulent transfer, emissivity and albedo. However, VIs often exhibit only moderate, non-linear relationships to these canopy attributes, compromising the accuracy of the models. We use case studies to illustrate the use and misuse of VIs, and argue for using VIs most simply as a measurement of canopy light absorption rather than as a surrogate for detailed features of canopy architecture. Used this way, VIs are compatible with “Big Leaf” SVAT and GCMs that assume that canopy carbon and moisture fluxes have the same relative response to the environment as any single leaf, simplifying the task of modeling complex landscapes.

Arizona↗

USGS2004

Temporal scaling of hydraulic head and river base flow and its implication for groundwater recharge

Spectral analyses were conducted for hourly hydraulic head ( h ) data observed over a 4‐year period at seven monitoring wells in the Walnut Creek watershed, Iowa. The log power spectral density of the hydraulic head fluctuations versus log frequency ( f ) at all seven wells is shown to have a distinct slope or fractal dimension ( D ), indicating temporal scaling in the time series of water level fluctuations. The fractal dimension of the time series varies from well to well, and the spectrum for the average h over all seven wells has a fractal dimension of 1.46 and Hurst coefficient of 0.54. The log power spectral density of estimated base flow in the Walnut Creek and four other watersheds versus log f is shown to have two distinct slopes with a break in scaling at about 30 days. It is shown that the groundwater recharge process in a basin can be estimated from a head spectrum based on existing theoretical results. Hydraulic head in an aquifer may fluctuate as a fractal in time in response to either a white noise or fractal recharge process, depending on physical parameters (i.e., transmissivity and specific yield) of the aquifer. The recharge process at the Walnut Creek watershed is shown to have a white noise spectrum based on the observed head spectrum.

Water Resources Research↗

USGS2017

Interannual to multidecadal climate forcings on groundwater resources of the U.S. West Coast

Study region The U.S. West Coast, including the Pacific Northwest and California Coastal Basins aquifer systems. Study focus Groundwater response to interannual to multidecadal climate variability has important implications for security within the water–energy–food nexus. Here we use Singular Spectrum Analysis to quantify the teleconnections between AMO, PDO, ENSO, and PNA and precipitation and groundwater level fluctuations. The computer program DAMP was used to provide insight on the influence of soil texture, depth to water, and mean and period of a surface infiltration flux on the damping of climate signals in the vadose zone. New hydrological insights for the region We find that PDO, ENSO, and PNA have significant influence on precipitation and groundwater fluctuations across a north-south gradient of the West Coast, but the lower frequency climate modes (PDO) have a greater influence on hydrologic patterns than higher frequency climate modes (ENSO and PNA). Low frequency signals tend to be preserved better in groundwater fluctuations than high frequency signals, which is a function of the degree of damping of surface variable fluxes related to soil texture, depth to water, mean and period of the infiltration flux. The teleconnection patterns that exist in surface hydrologic processes are not necessarily the same as those preserved in subsurface processes, which are affected by damping of some climate variability signals within infiltrating water.

California, Oregon, Washington↗

USGS1999

Hydrated salt minerals on Europa's surface from the Galileo near-infrared mapping spectrometer (NIMS) investigation

We reported evidence of heavily hydrated salt minerals present over large areas of Europa's surface from analysis of reflectance spectra returned by the Galileo mission near infrared mapping spectrometer (NIMS) [ McCord et al. , 1997a, b, 1998a, b]. Here we elaborate on this earlier evidence, present spatial distributions of these minerals, examine alternate water-ice interpretations, expand on our hydrated-salts interpretation, consider salt mineral stability on Europa, and discuss the implications. Extensive well-defined areas on Europa show distinct, asymmetric water-related absorption bands in the 1 to 2.5-μm region. Radiative transfer modeling of water ice involving different particle sizes and layers at Europa temperatures does not reproduce the distinctive Europa water bands. However, ice near its melting temperature, such as in terrestrial environments, does have some characteristics of the Europa spectrum. Alternatively, some classes of heavily hydrated minerals do exhibit such water bands. Among plausible materials, heavily hydrated salt minerals, such as magnesium and sodium sulfates, sodium carbonate and their mixtures, are preferred. All Europa spectral features are present in some salt minerals and a very good match to the Europa spectrum can be achieved by mixing several salt spectra. However, no single or mix of salt mineral spectra from the limited library available has so far been found to perfectly match the Europa spectrum in every detail. The material is concentrated at the lineaments and in chaotic terrain, which are technically disrupted areas on the trailing side. Since the spectrum of the material on Europa is nearly the same everywhere so-far studied, the salt or salt-mixture composition may be nearly uniform. This suggests similar sources and processes over at least a near-hemispheric scale. This would suggest that an extensive subsurface ocean containing dissolved salts is the source, and several possible mechanisms for deposit emplacement are considered. The hydrogen bonds associated with hydration of these salts are similar or greater in strength and energy to those in pure water ice. Thus, once on the surface, the salt minerals should be as stable to disruption as water ice at the Europa temperatures, and mechanisms are suggested to enhance the stability of both materials. Spectra obtained of MgSO 4 ·6H 2 O at 77 K show only small differences from room temperature spectra. The main difference is the appearance of the individual absorptions composing the broad, composite water features and associated with the several different H 2 O sites in the salt hydrate molecule. This suggests that the Europa absorption bands are also composites. Thus higher spectral resolution may reveal these diagnostic features in Europa's spectrum. The specific salts present and their relative abundances would be indicators of the chemistry and conditions of an ocean environment, and areas of fresh, heavy concentration of these minerals should make ideal lander mission sampling sites.

Journal of Geophysical Research E: Planets↗

USGS2009

Shoreline features of Titan's Ontario Lacus from Cassini/VIMS observations

We analyze observations of Titan's south polar lake Ontario Lacus obtained by Cassini's Visual and Infrared Mapping Spectrometer during the 38th flyby of Titan (T38; 2007 December 5). These near-closest-approach observations have the highest signal-to-noise, the finest spatial resolution, and the least atmospheric influence of any near-infrared lake observation to date. We use the large, spatially flat, and low-albedo interior of Ontario Lacus as a calibration target allowing us to derive an analytical atmospheric correction for emission angle. The dark lake interior is surrounded by two separate annuli that follow the lake interior's contours. The inner annulus is uniformly dark, but not so much as the interior lake, and is generally 5-10 kilometers wide at the lake's southeastern margin. We propose that it represents wet lakebed sediments exposed by either tidal sloshing of the lake or seasonal methane loss leading to lower lake-volume. The exterior annulus is bright and shows a spectrum consistent with a relatively low water-ice content relative to the rest of Titan. It may represent fine-grained condensate deposits from a past era of higher lake level. Together, the annuli seem to indicate that the lake level for Ontario Lacus has changed over time. This hypothesis can be tested with observations scheduled for future Titan flybys. ?? 2008 Elsevier Inc.

Icarus↗

USGS1994

Displacement of soil pore water by trichloroethylene

Dense nonaqueous phase liquids (DNAPLS) are important pollutants because of their widespread use as chemical and industrial solvents. An example of the pollution caused by the discharge of DNAPLs is found at the Picatinny Arsenal, New Jersey, where trichloroethylene (TCE) has been discharged directly into the unsaturated zone. This discharge has resulted in the formation of a plume of TCE-contaminated water in the aquifer downgradient of the discharge. A zone of dark-colored groundwater containing a high dissolved organic C content has been found near the point of discharge of the TCE. The colored-water plume extends from the point of discharge at least 30 m (100 feet) downgradient. Fulvic acids isolated from the colored-waters plume, from water from a background well that has not been affected by the discharge of chlorinated solvents, and from soil pore water collected in a lysimeter installed at an uncontaminated site upgradient of the study area have been compared. Nuclear magnetic resonance spectra of the fulvic acids from the colored waters and from the lysimeter are very similar, but are markedly different from the nuclear magnetic resonance spectrum of the fulvic acid from the background well. The three-dimensional fluorescence spectrum and the DOC fractionation profile of the colored groundwater and the soil pore water are very similar to each other, but quite different from those of the background water. It is proposed from these observations that this colored water is soil pore water that has been displaced by a separate DNAPL liquid phase downward to the saturated zone.

Journal of Environmental Quality↗

USGS2024

Evaluation and refinement of chlorophyll-a algorithms for high-biomass blooms in San Francisco Bay (USA)

A massive bloom of the raphidophyte Heterosigma akashiwo occurred in summer 2022 in San Francisco Bay, causing widespread ecological impacts including events of low dissolved oxygen and mass fish kills. The rapidly evolving bloom required equally rapid management response, leading to the use of near-real-time image analysis of chlorophyll from the Ocean and Land Colour Instrument (OLCI) aboard Sentinel-3. Standard algorithms failed to adequately capture the bloom, signifying a need to refine a two-band algorithm developed for coastal and inland waters that relates the red-edge part of the remote sensing reflectance spectrum to chlorophyll. While the bloom was the initial motivation for optimizing this algorithm, an extensive dataset of in-water validation measurements from both bloom and non-bloom periods was used to evaluate performance over a range of concentrations and community composition. The modified red-edge algorithm with a simplified atmospheric correction scheme outperformed existing standard products across diverse conditions, and given the modest computational requirements, was found suitable for operational use and near-real-time product generation. The final version of the algorithm successfully minimizes error for non-bloom periods when chlorophyll a is typically <30 mg m −3 , while also capturing bloom periods of >100 mg m −3 chlorophyll a .

California↗

USGS2002

Concentration method for the spectrochemical determination of seventeen minor elements in natural water

A method for the quantitative spectrochemical determination of microgram amounts of 17 minor elements in water is given. The chelating reagents 8-quinolinol, tannic acid, and thionalide are utilized to concentrate traces (1 to 500 μ g.) of aluminum, cobalt, chromium, copper, iron, gallium, germanium, manganese, nickel, titanium, vanadium, bismuth, lead, molybdenum, cadmium, zinc, and beryllium. Indium is added as a buffer, and palladium is used as an internal standard. The ashed oxides of these 17 metals are subsequently subjected to direct current arcing conditions during spectrum analysis. The method can be used to analyze waters with dissolved solids ranging from less than 100 to more than 100,000 p.p.m. There is no limiting concentration range for the determination of the heavy metals since any volume of sample can be used that will contain a heavy metal concentration within the analytical range of the method. Both the chemical and spectrographic procedures are described, and precision and accuracy data are given.

Analytical Chemistry↗

USGS2023

Estimating groundwater pumping for irrigation: A method comparison

Effective groundwater management is critical to future environmental, ecological, and social sustainability and requires accurate estimates of groundwater withdrawals. Unfortunately, these estimates are not readily available in most areas due to physical, regulatory, and social challenges. Here, we compare four different approaches for estimating groundwater withdrawals for agricultural irrigation. We apply these methods in a groundwater-irrigated region in the state of Kansas, USA, where high-quality groundwater withdrawal data are available for evaluation. The four methods represent a broad spectrum of approaches: (1) the hydrologically-based Water Table Fluctuation method (WTFM); (2) the demand-based SALUS crop model; (3) estimates based on satellite-derived evapotranspiration (ET) data from OpenET; and (4) a landscape hydrology model which integrates hydrologic- and demand-based approaches. The applicability of each approach varies based on data availability, spatial and temporal resolution, and accuracy of predictions. In general, our results indicate that all approaches reasonably estimate groundwater withdrawals in our region, however, the type and amount of data required for accurate estimates and the computational requirements vary among approaches. For example, WTFM requires accurate groundwater levels, specific yield, and recharge data, whereas the SALUS crop model requires adequate information about crop type, land use, and weather. This variability highlights the difficulty in identifying what data, and how much, are necessary for a reasonable groundwater withdrawal estimate, and suggests that data availability should drive the choice of approach. Overall, our findings will help practitioners evaluate the strengths and weaknesses of different approaches and select the appropriate approach for their application.

Kansas↗

USGS2010

Landsat Thematic Mapper Image Mosaic of Colorado

The U.S. Geological Survey (USGS) Rocky Mountain Geographic Science Center (RMGSC) produced a seamless, cloud-minimized remotely-sensed image spanning the State of Colorado. Multiple orthorectified Landsat 5 Thematic Mapper (TM) scenes collected during 2006-2008 were spectrally normalized via reflectance transformation and linear regression based upon pseudo-invariant features (PIFS) following the removal of clouds. Individual Landsat scenes were then mosaicked to form a six-band image composite spanning the visible to shortwave infrared spectrum. This image mosaic, presented here, will also be used to create a conifer health classification for Colorado in Scientific Investigations Map 3103. An archive of past and current Landsat imagery exists and is available to the scientific community (http://glovis.usgs.gov/), but significant pre-processing was required to produce a statewide mosaic from this information. Much of the data contained perennial cloud cover that complicated analysis and classification efforts. Existing Landsat mosaic products, typically three band image composites, did not include the full suite of multispectral information necessary to produce this assessment, and were derived using data collected in 2001 or earlier. A six-band image mosaic covering Colorado was produced. This mosaic includes blue (band 1), green (band 2), red (band 3), near infrared (band 4), and shortwave infrared information (bands 5 and 7). The image composite shown here displays three of the Landsat bands (7, 4, and 2), which are sensitive to the shortwave infrared, near infrared, and green ranges of the electromagnetic spectrum. Vegetation appears green in this image, while water looks black, and unforested areas appear pink. The lines that may be visible in the on-screen version of the PDF are an artifact of the export methods used to create this file. The file should be viewed at 150 percent zoom or greater for optimum viewing.

Scientific Investigations Map↗

USGS2019

A new indicator framework for quantifying the intensity of the terrestrialwater cycle

A quantitative framework for characterizing the intensity of the water cycle over land is presented, and illustrated using a spatially distributed water-balance model of the conterminous United States (CONUS). We approach water cycle intensity (WCI) from a landscape perspective; WCI is defined as the sum of precipitation (P) and actual evapotranspiration (AET) over a spatially explicit landscape unit of interest, averaged over a specified time period (step) of interest. The time step may be of any length for which data or simulation results are available (e.g., sub-daily to multi-decadal). We define the storage-adjusted runoff (Q0) as the sum of actual runoff (Q) and the rate of change in soil moisture storage (DS/Dt, positive or negative) during the time step of interest. The Q0 indicator is demonstrated to be mathematically complementary to WCI, in a manner that allows graphical interpretation of their relationship. For the purposes of this study, the indicators were demonstrated using long-term, spatially distributed model simulations with an annual time step. WCI was found to increase over most of the CONUS between the 1945 to 1974 and 1985 to 2014 periods, driven primarily by increases in P. In portions of the western and southeastern CONUS, Q0 decreased because of decreases in Q and soil moisture storage. Analysis of WCI and Q0 at temporal scales ranging from sub-daily to multi-decadal could improve understanding of the wide spectrum of hydrologic responses that have been attributed to water cycle intensification, as well as trends in those responses.

Journal of Hydrology↗

USGS2018

Broad-spectrum antiviral JL122 blocks infection and inhibits transmission of aquatic rhabdoviruses

The aquaculture industry is growing rapidly to meet the needs for global protein consumption. Viral diseases in aquaculture are quite challenging due to lack of treatment options as well as limited injection-delivery vaccines, which are costly. Thus, water-immersion antiviral treatments are highly desirable. This study focused on broad-spectrum, light-activated antivirals that target the viral membrane (envelope) of viruses to prevent viral-cell membrane fusion, ultimately blocking viral entry into cells. Of the tested small-molecules, JL122, a new broad-spectrum antiviral previously unexplored against aquatic viruses, blocked infection of three aquatic rhabdoviruses (IHNV, VHSV and SVCV) in cell culture and in two live fish challenge models. Importantly, JL122 inhibited transmission of IHNV from infected to uninfected rainbow trout. Further, the effective antiviral concentrations were not toxic to cells or susceptible fish. These results show promise for JL122 to become an immersion treatment option for outbreaks of aquatic enveloped viral infections.

Virology↗

USGS2016

Climate Change Science Activities of the U.S. Geological Survey in New England

The U.S. Geological Survey (USGS) has actively pursued research in the effects of climate change on the hydrology of New England. Ongoing focus areas of climate change science activities of the USGS in New England include the following: • Hydrologic climate-response data (initiating or expanding long-term hydrologic climate-response data collection networks to detect and monitor climate-related changes in hydrology) • Relations between historical climatic and hydrologic variation (investigating historic relations between long-term climatic variation and hydrologic variation and connecting these relations to future conditions as forecasted by the Interagency Panel on Climate Change (Nakićenović and others, 2000) • Hydrologic change on natural and human (incorporating climate change scenarios into assessments of how flows in streams or water levels in aquifers may change) • Relations between climatic and hydrologic variation (characterizing impacts of climate change on floods and droughts, the long-term availability of water supplies for societal and natural uses in response to climate changes) • Developing tools to forecast ecosystem change and water resources management (developing regionally consistent tools for forecasting ecosystem change and resource management) This fact sheet presents recent climate change investigations of the USGS in New England using selected recent publications. These publications highlight the broad spectrum of expertise and commitment to understanding the relations of climate change and water resources in New England.

New England↗

USGS2008

Infrared (0.83–5.1 μm) photometry of Phoebe from the Cassini Visual Infrared Mapping Spectrometer

Three weeks prior to the commencement of Cassini's 4 year tour of the saturnian system, the spacecraft executed a close flyby of the outer satellite Phoebe. The infrared channel of the Visual Infrared Mapping Spectrometer (VIMS) obtained images of reflected light over the 0.83–5.1 μm spectral range with an average spectral resolution of 16.5 nm, spatial resolution up to 2 km, and over a range of solar phase angles not observed before. These images have been analyzed to derive fundamental photometric parameters including the phase curve and phase integral, spectral geometric albedo, bolometric Bond albedo, and the single scattering albedo. Physical properties of the surface, including macroscopic roughness and the single particle phase function, have also been characterized. Maps of normal reflectance show the existence of two major albedo regimes in the infrared, with gradations between the two regimes and much terrain with substantially higher albedos. The phase integral of Phoebe is 0.29±0.03 0.29±0.03 , with no significant wavelength dependence. The bolometric Bond albedo is 0.023±007 0.023±007 . We find that the surface of Phoebe is rough, with a mean slope angle of 33°. The satellite's surface has a substantial forward scattering component, suggesting that its surface is dusty, perhaps from a history of outgassing. The spectrum of Phoebe is best matched by a composition including water ice, amorphous carbon, iron-bearing minerals, carbon dioxide, and Triton tholin. The characteristics of Phoebe suggest that it originated outside the saturnian system, perhaps in the Kuiper Belt, and was captured on its journey inward, as suggested by Johnson and Lunine (2005) .

Icarus↗