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Results for “Journal of Experimental Marine Biology and Ecology”

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33 records · Page 2Linked to original sources
USGS2011

Testing the effect of habitat structure and complexity on nekton assemblages using experimental oyster reefs

Structurally complex habitats are often associated with more diverse and abundant species assemblages in both aquatic and terrestrial ecosystems. Biogenic reefs formed by the eastern oyster ( Crassostrea virginica ) are complex in nature and are recognized for their potential habitat value in estuarine systems along the US Atlantic and Gulf of Mexico coasts. Few studies, however, have examined the response of nekton to structural complexity within oyster reefs. We used a quantitative sampling technique to examine how the presence and complexity of experimental oyster reefs influence the abundance, biomass, and distribution of nekton by sampling reefs 4 months and 16 months post-construction. Experimental oyster reefs were colonized immediately by resident fishes and decapod crustaceans, and reefs supported a distinct nekton assemblage compared to mud-bottom habitat. Neither increased reef complexity, nor age of the experimental reef resulted in further changes in nekton assemblages or increases in nekton abundance or diversity. The presence of oyster reefs per se was the most important factor determining nekton usage.

Journal of Experimental Marine Biology and Ecology↗
USGS2012

Experimentally derived salinity tolerance of hatchling Burmese pythons (Python molurus bivittatus) from the Everglades, Florida (USA)

In a laboratory setting, we tested the ability of 24 non-native, wild-caught hatchling Burmese pythons (Python molurus bivittatus) collected in the Florida Everglades to survive when given water containing salt to drink. After a one-month acclimation period in the laboratory, we grouped snakes into three treatments, giving them access to water that was fresh (salinity of 0, control), brackish (salinity of 10), or full-strength sea water (salinity of 35). Hatchlings survived about one month at the highest marine salinity and about five months at the brackish-water salinity; no control animals perished during the experiment. These results are indicative of a "worst-case scenario", as in the laboratory we denied access to alternate fresh-water sources that may be accessible in the wild (e.g., through rainfall). Therefore, our results may underestimate the potential of hatchling pythons to persist in saline habitats in the wild. Because of the effect of different salinity regimes on survival, predictions of ultimate geographic expansion by non-native Burmese pythons that consider salt water as barriers to dispersal for pythons may warrant re-evaluation, especially under global climate change and associated sea-level-rise scenarios.

Florida↗
USGS2013

Influence of temperature on viral hemorrhagic septicemia (Genogroup IVa) in Pacific herring, Clupea pallasii Valenciennes

An inverse relationship between water temperature and susceptibility of Pacific herring ( Clupea pallasii ) to viral hemorrhagic septicemia, genogroup IVa (VHS) was indicated by controlled exposure studies where cumulative mortalities, viral shedding rates, and viral persistence in survivors were greatest at the coolest exposure temperatures. Among groups of specific pathogen-free (SPF) Pacific herring maintained at 8, 11, and 15 °C, cumulative mortalities after waterborne exposure to viral hemorrhagic septicemia virus (VHSV) were 78%, 40%, and 13%, respectively. The prevalence of survivors with VHSV-positive tissues 25 d post-exposure was 64%, 16%, and 0% (at 8, 11 and 15 °C, respectively) with viral prevalence typically higher in brain tissues than in kidney/spleen tissue pools at each temperature. Similarly, geometric mean viral titers in brain tissues and kidney/spleen tissue pools decreased at higher temperatures, and kidney/spleen titers were generally 10-fold lower than those in brain tissues at each temperature. This inverse relationship between temperature and VHS severity was likely mediated by an enhanced immune response at the warmer temperatures, where a robust type I interferon response was indicated by rapid and significant upregulation of the herring Mx gene. The effect of relatively small temperature differences on the susceptibility of a natural host to VHS provides insights into conditions that preface periodic VHSV epizootics in wild populations throughout the NE Pacific.

Journal of Experimental Marine Biology and Ecology↗
USGS2014

Unique characteristics of the trachea of the juvenile leatherback turtle facilitate feeding, diving and endothermy

The adult leatherback turtle Dermochelys coriacea overlaps in body size (300–500 kg) with many marine mammals, yet develops from a 50 g hatchling. Adults can dive deeper than 1200 m and have core body temperatures of 25 °C; hatchlings are near-surface dwellers. Juvenile leatherbacks have rarely been studied; here we present anatomical information for the upper respiratory tract of 3 turtles (66.7–83.0 cm straight carapace length; 33.2–53.4 kg body mass) incidentally captured by long-line fisheries. Combined with existing information from adults and hatchlings, our data show that there is an ontogenic shift in tracheal structure, with cartilaginous rings becoming broader and eventually fusing anteriorly. This ontogenic shift during independent existence is unique among extant deep-diving air breathing vertebrates. Tract wall thickness is graded, becoming progressively thinner from larynx to bronchi. In addition, cross-sectional shape becomes increasingly dorsoventrally flattened (more elliptical) from anterior to posterior. These characteristics ensure that the tract will collapse from posterior to anterior during dives. This study contains the first report of a double (= internally bifurcated) posterior section of the trachea; it is suggested that this allows continuous food movement along the esophagus without tracheal collapse. The whole upper respiratory tract (from larynx to lungs) has a vascular lining (thicker anteriorly than posteriorly) that appears to be a simple analog of the complex turbinates of birds and mammals. Our study confirmed that the leatherback tracheal structure represents a distinctive way of dealing with the challenges of diving in deep, cold sea water.

Journal of Experimental Marine Biology and Ecology↗
USGS2014

Spatial distribution of loggerhead turtle ( Caretta caretta ) emergences along a highly dynamic beach in the northern Gulf of Mexico

As coastlines change due to sea level rise and an increasing human presence, understanding how species, such as marine turtles, respond to alterations in habitat is necessary for proper management and conservation. Survey data from a major nesting beach in the northern Gulf of Mexico, where a revetment was installed, was used to assess spatial distribution of loggerhead emergences. Through use of Quadrat analysis and piecewise linear regression with breakpoint, we present evidence to suggest that nest site selection in loggerheads is determined in the nearshore environment, and by characteristics such as wave height, alongshore currents, depth and patterns of erosion and accretion. Areas of relatively dense nesting were found in areas with relatively strong alongshore currents, relatively small waves, a steep offshore slope and the largest historical rates of erosion. Areas of relatively dense nesting also corresponded to areas of low nesting success. Both nesting and non-nesting emergences were clustered immediately adjacent to the revetment and at other eroding sites along the beach. These results suggest that alterations to the nearshore environment from activities such as construction of a jetty, dredging or installation of pilings, may impact sea turtle nest distribution alongshore. We also show that piecewise linear regression with breakpoint is a technique that can be used with geomorphological and oceanographic data to predict locations of nest clumping and may be useful for managers at other nesting beaches.

Florida↗
USGS2014

Pink spot, white spot: the pineal skylight of the leatherback turtle ( Dermochelys coriacea Vandelli 1761) skull and its possible role in the phenology of feeding migrations

Leatherback turtles, Dermochelys coriacea , which have an irregular pink area on the crown of the head known as the pineal or ‘pink spot’, forage upon jellyfish in cool temperate waters along the western and eastern margins of the North Atlantic during the summer. Our study showed that the skeletal structures underlying the pink spot in juvenile and adult turtles are compatible with the idea of a pineal dosimeter function that would support recognition of environmental light stimuli. We interrogated an extensive turtle sightings database to elucidate the phenology of leatherback foraging during summer months around Great Britain and Ireland and compared the sightings with historical data for sea surface temperatures and day lengths to assess whether sea surface temperature or light periodicity/levels were likely abiotic triggers prompting foraging turtles to turn south and leave their feeding grounds at the end of the summer. We found that sea temperature was too variable and slow changing in the study area to be useful as a trigger and suggest that shortening of day lengths as the late summer equilux is approached provides a credible phenological cue, acting via the pineal, for leatherbacks to leave their foraging areas whether they are feeding close to Nova Scotia or Great Britain and Ireland.

Journal of Experimental Marine Biology and Ecology↗
USGS2015

A comparison between boat-based and diver-based methods for quantifying coral bleaching

Recent increases in both the frequency and severity of coral bleaching events have spurred numerous surveys to quantify the immediate impacts and monitor the subsequent community response. Most of these efforts utilize conventional diver-based methods, which are inherently time-consuming, expensive, and limited in spatial scope unless they deploy large teams of scientifically-trained divers. In this study, we evaluated the effectiveness of the Along-Track Reef Imaging System (ATRIS), an automated image-acquisition technology, for assessing a moderate bleaching event that occurred in the summer of 2011 in the Florida Keys. More than 100,000 images were collected over 2.7 km of transects spanning four patch reefs in a 3-h period. In contrast, divers completed 18, 10-m long transects at nine patch reefs over a 5-day period. Corals were assigned to one of four categories: not bleached, pale, partially bleached, and bleached. The prevalence of bleaching estimated by ATRIS was comparable to the results obtained by divers, but only for corals > 41 cm in size. The coral size-threshold computed for ATRIS in this study was constrained by prevailing environmental conditions (turbidity and sea state) and, consequently, needs to be determined on a study-by-study basis. Both ATRIS and diver-based methods have innate strengths and weaknesses that must be weighed with respect to project goals.

Florida↗
USGS2016

The effects of large beach debris on nesting sea turtles

A field experiment was conducted to understand the effects of large beach debris on sea turtle nesting behavior as well as the effectiveness of large debris removal for habitat restoration. Large natural and anthropogenic debris were removed from one of three sections of a sea turtle nesting beach and distributions of nests and false crawls (non-nesting crawls) in pre- (2011–2012) and post- (2013–2014) removal years in the three sections were compared. The number of nests increased 200% and the number of false crawls increased 55% in the experimental section, whereas a corresponding increase in number of nests and false crawls was not observed in the other two sections where debris removal was not conducted. The proportion of nest and false crawl abundance in all three beach sections was significantly different between pre- and post-removal years. The nesting success, the percent of successful nests in total nesting attempts (number of nests + false crawls), also increased from 24% to 38%; however the magnitude of the increase was comparably small because both the number of nests and false crawls increased, and thus the proportion of the nesting success in the experimental beach in pre- and post-removal years was not significantly different. The substantial increase in sea turtle nesting activities after the removal of large debris indicates that large debris may have an adverse impact on sea turtle nesting behavior. Removal of large debris could be an effective restoration strategy to improve sea turtle nesting.

Journal of Experimental Marine Biology and Ecology↗
USGS2020

Spatial and temporal diving behavior of non-breeding common murres during two summers of contrasting ocean conditions

Successful foraging of marine predators depends on environmental conditions, which also influence prey availability. Neutral or negative El Niño Southern Oscillation and Pacific Decadal Oscillation ocean conditions during the summer of 2013 and strongly positive conditions during the summer of 2015 in the northern California Current System provided a case study to evaluate a marine predator's response to anomalously warm conditions. We used satellite transmitters with saltwater switches to track movements and estimate dive behavior among non-breeding common murres (Uria aalge) off Oregon prior to and during a marine heatwave. We quantified differences in space-use between years, applied linear mixed models to determine environmental influences (e.g. sea surface temperature, surface salinity, chlorophyll a, ocean depth, and calendar date) on dive frequency and dive duration, and contrasted dive activity between time of day, year, and sexes. The majority of birds dispersed away from capture locations, which were situated near the southern range limit of their population. In both years, murres used the Salish Sea and the Columbia River plume; however, murres spent more time foraging in the Columbia River plume and in continental slope habitat during the marine heatwave of 2015. During 2015, dive frequency was reduced, and dive durations were almost twice as long during daytime indicating deeper or more dispersed prey. Increased dive frequency was positively associated with temperature, chlorophyll a, and crepuscular periods. Cluster analysis of dive activity and the top-ranked predictive dive duration model revealed associations between longer-duration dives and decreased dive frequency, marine slope habitat, and cooler ocean temperatures. Murres were relatively inactive throughout the night and we found no sex differences in dive activity. Changes in common murre foraging tactics were associated with ocean warming and revealed selectivity in spatial and temporal use of foraging habitats. Productive marine features including the Columbia River plume provided refuge for murres during apparently poor ocean conditions associated with the marine heatwave. Identifying refuge areas used by highly mobile species experiencing varying ocean conditions is critical for adaptive marine spatial planning that can accommodate a changing ocean climate.

California↗
USGS2021

Environmental factors predicting the orientation of sea turtle hatchlings on a naturally lighted beach: A baseline for light-management goals

On sea turtle nesting beaches, artificial lighting associated with human development interferes with hatchling orientation from nest to sea. Although hatchling disorientation has been documented for many beaches, data that managers can use in understanding, predicting, and managing the issue are of limited detail. The present study provides baseline hatchling orientation data that can be compared to those from beaches with artificial lighting to prioritize light-management efforts there. In 2014, the precision of hatchling orientation was quantified for 87 nests on a naturally lighted beach that had little to no artificial lighting. Precision of hatchling orientation was regressed against seven environmental variables: beach slope, distance from nest to dune, dune height, apparent dune silhouette height relative to nest site, moon illumination percentage, cloud cover percentage, and relative humidity. Results favored a regression model that included distance from nest to dune, with shorter distances from the dune predicting a narrower angular range (i.e., greater precision) of hatchling orientation. The study confirmed findings of an earlier laboratory experiment that highlighted the importance to accurate hatchling orientation of a dark silhouette (dune) on the side of the nest site opposite the ocean side. Reducing artificial light and promoting the planting of pioneer plants that assist dune formation can increase hatchling survival.

Florida↗
USGS2022

Temperature-based modeling of incubation period to protect loggerhead hatchlings on an urban beach in Northwest Florida

Sea turtle hatchlings face many natural and anthropogenic threats during their short journey to the water after emerging from nests. Reducing hatchling mortality is critical to population recovery of imperiled sea turtle species; however, protecting hatchlings is particularly challenging on beaches degraded by human development and disturbances, including artificial lighting. Managers need practical methods to reduce hatchling mortality without harming their natural behavior or development. To address this need, we describe an approach to reduce mortality of loggerhead hatchlings that relies on prediction of clutch incubation length and knowledge of hatchling emergence patterns. We developed models to predict incubation length utilizing sand temperature and nest depth data from 133 loggerhead nests laid on an urban beach in Northwest Florida from 2013 to 2020. Incubation length was predicted to within 2.2 days using mean sand temperatures measured just outside of the clutch. Predicted accuracy improved to 1.9 days using a 2-parameter model incorporating sand temperature and measured depth to the topmost eggs. Hatchlings emerged almost exclusively at night in a single large group with no evidence of asynchronous emergences. Emergence times were skewed toward the early evening, in contrast to loggerhead nests on the Florida Atlantic coast which tend to hatch near midnight. Using these prediction tools, monitoring efforts could be focused on days and times of expected emergence to enable protection of hatchlings emerging naturally from nests left in situ. The method used here, while not a substitute for recovery of degraded nesting habitat, provides a way to protect hatchlings that avoids disturbing the eggs with instruments or restraining the hatchlings with cages or screens.

Florida↗
USGS2023

Differential hypoxia tolerance of eastern oysters from the northern Gulf of Mexico at elevated temperature

Increasing prevalence of hypoxia in shallow waters of U.S. Gulf of Mexico (GoM) estuaries can pose a serious threat to eastern oysters ( Crassostrea virginica ). Their tolerance to hypoxia, however, is not well characterized, especially at elevated temperatures (>30 °C) typical of GoM estuaries in summer. Moreover, it is unknown whether differences in hypoxia tolerance exist between GoM oyster populations growing in estuaries differing in local environmental conditions. Wild oyster broodstocks were collected from four estuarine sites in Texas (Packery Channel, PC and Aransas Bay, AB) and Louisiana (Calcasieu Lake, CL and Vermilion Bay, VB) and their adult progenies (F1) were tested (Study 1) under continuous hypoxia (<2.0 mg O 2 L −1 ) at 32 °C. Significant differences in hypoxia tolerance were found between F1 populations with calculated median lethal time (LT 50 ) ranging from 3.9 to 12.5 days. PC and CL oysters were the most and least tolerant populations, respectively. The study was repeated twice more (Studies 2 and 3) using PC and CL oysters, and their responses at the organismic, cellular, and biochemical levels were investigated. Valve movement was monitored, and oysters were sampled to measure hemocyte density, plasma protein, calcium and glutathione concentrations, and digestive gland alanine and succinate concentrations after either 3–5 days (Study 2) or 1–3 days (Study 3) of hypoxia exposure. From the onset of hypoxia until their death, oysters stayed opened 13–32% of the time compared to 53–64% under normoxia, but no differences between populations were detected under hypoxia. PC oyster but not CL oyster plasma glutathione concentrations increased significantly in both studies. Under longer (3–5 days) hypoxia exposure, plasma calcium and glutathione concentrations of PC oysters were significantly higher than CL oysters. These results suggest PC oysters were better able to protect tissues against acidosis and oxidative damage during hypoxia and high temperature stress than CL oysters. Overall, our results indicate that oyster populations originating from the GoM vary in their response to hypoxia and high temperature stress and possess differential tolerance.

Alabama, Louisiana, Mississippi, Texas↗
USGS2024

Does the extent of glacial cover across watersheds and discharge periods affect dietary resource use of nearshore fishes in the Northern Gulf of Alaska?

Northern high-latitude glaciers impact nearshore marine ecosystems through the discharge of cold and fresh waters, including nutrients and organic matter. Fishes are important integrators of ecosystem processes and hold key positions in the transfer of energy to higher trophic positions in such systems. This study used a natural gradient in space and time, including watershed glacial cover (0–60%) of five adjacent estuaries and three sequential discharge periods (pre-peak, peak, post-peak) in the northern Gulf of Alaska (Kachemak Bay) to test whether differences in glacial cover of watersheds upstream of estuaries affect dietary resource use of nearshore fishes. Dietary resource use was assessed using stomach content and stable carbon and nitrogen isotope analyses to determine fish diet composition and trophic niche width. Crescent gunnel ( Pholis laeta ), a mostly sedentary species, was our focal species for comparisons across estuaries and discharge periods. Discharge period had a greater influence on diet composition and trophic niche width of crescent gunnels than watershed glacial coverage. Niche width of crescent gunnel was larger during the post-peak discharge period compared to pre-peak and peak periods, coincident with a shift in prey spectrum. However, watershed glacial cover was not a suitable predictor of niche width of crescent gunnel. Trophic resource use was also considered along this glacial cover gradient for two other fish species, Pacific staghorn sculpin ( Leptocottus armatus ) and starry flounder ( Platichthys stellatus ), but within the post-peak discharge period only. These species exploited a larger prey base compared to crescent gunnel, likely due to their greater mobility. Similar to crescent gunnel, there were no relationships in trophic niche width associated with watershed glacial coverage for these other species during the post-peak discharge period. Instead, trophic resource use of these three nearshore fish species was influenced by a more complex set of dynamic environmental variables (salinity, temperature, turbidity, and discharge), as well as static watershed characteristics, especially vegetation cover. Such drivers can act through changes in metabolic rates, modulating foraging strategies and trophic connectivity, as well as terrestrial nutrient delivery to support estuarine production. The environmental conditions associated with the glacially influenced estuaries during our study period (2020−2021) seemed within a range that allowed nearshore fishes to maintain energy pathways and prey bases across these estuaries, but it is unknown how these estuarine food webs may be influenced in years of extreme conditions such as during heat waves, droughts, or floods.

Alaska↗
USGS1999

Changes in proximate composition and somatic energy content for Pacific sand lance ( Ammodytes hexapterus ) from Kachemak Bay, Alaska relative to maturity and season

Mean dry-weight energy values of adult Pacific sand lance ( Ammodytes hexapterus ) peaked in spring and early summer (20.91 kJg −1 for males, 21.08 kJg −1 for females), then declined by about 25% during late summer and fall (15.91 kJg −1 for males, 15.74 kJg −1 for females). Late summer declines in energy density paralleled gonadal development. Gender differences in energy density (males<females) were only apparent from August to October. Adult sand lance spawn in October, entering the winter with close to their minimum whole body energy content. Juvenile sand lance exhibited a relatively constant protein to lipid ratio until they reached 80 mm fork length. Thereafter, relative proportions of protein remained constant while lipid proportions increased significantly. Dry weight energy densities of juveniles increased from a minimum 16.67 kJg −1 to a maximum of 19.68 kJg −1 , and (per g) are higher than adults in late summer. The seasonal food value of adult sand lance to predators varies markedly, but maximum energetic value coincides with important feeding periods for marine mammals, fish, and seabirds.

Alaska↗
USGS2015

Ecological effects of the harvest phase of geoduck clam (Panopea generosa Gould, 1850) aquaculture on infaunal communities in southern Puget Sound, Washington USA.

Intertidal aquaculture for geoducks ( Panopea generosa Gould, 1850) is expanding in southern Puget Sound, Washington, where gently sloping sandy beaches are used for field culture. Geoduck aquaculture contributes significantly to the regional economy, but has become controversial because of a range of unresolved questions involving potential biological impacts on marine ecosystems. From 2008 through 2012, the authors used a &ldquo;before-after-control-impact&rdquo; experimental design, emphasizing spatial scales comparable with those used by geoduck culturists to evaluate the effects of harvesting market-ready geoducks on associated benthic infaunal communities. Infauna were sampled at three different study locations in southern Puget Sound at monthly intervals before, during, and after harvests of clams, and along extralimital transects extending away from the edges of cultured plots to assess the effects of harvest activities in adjacent uncultured habitat. Using multivariate statistical approaches, strong seasonal and spatial signals in patterns of abundance were found, but there was scant evidence of effects on the community structure associated with geoduck harvest disturbances within cultured plots. Likewise, no indications of significant &ldquo;spillover&rdquo; effects of harvest on uncultured habitat adjacent to cultured plots were noted. Complementary univariate approaches revealed little evidence of harvest effects on infaunal biodiversity and indications of modest effects on populations of individual infaunal taxa. Of 10 common taxa analyzed, only three showed evidence of reduced densities, although minor, after harvests whereas the remaining seven taxa indicated either neutral responses to harvest disturbances or increased abundance either during or in the months after harvest events. It is suggested that a relatively active natural disturbance regime, including both small-scale and large-scale events that occur with comparable intensity but more frequently than geoduck harvest events in cultured plots, has facilitated assemblage-level infaunal resistance and resilience to harvest disturbances.

Washington↗