Search USGS⌕ Search

SEARCH · Search USGS

Results for “Interagency Ecological Program Newsletter”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 37 records · Page 2Linked to original sources
USGS2005

Preliminary results from a shallow water benthic grazing study

The nutrient-rich, shallow waters of San Francisco Bay support high rates of primary production, limited not by nutrients but by light availability and benthic grazing (Alpine and others 1992; Cloern 1982). Phytoplankton blooms are an important food source for upper trophic levels. Consequently animal populations, such as fish, may suffer under conditions of high benthic bivalve grazing. It has been hypothesized that several species of fish are suffering as a result of severe decreases in available phytoplankton since the introduction of Potamocorbula amurensis into San Francisco Bay (Feyrer 2003). The extent of reduction in phytoplankton biomass by benthic bivalves is dependent on both physical and biological factors in addition to their spatial and temporal variability. Physical factors identified as important include: (1) vertical mixing rates, which are a function of wind velocity, currents, and bottom roughness; (2) suspended sediment concentrations; and (3) phytoplankton settling rates. The biological factors controlling the extent of phytoplankton grazing include animal density and organism size, pumping rate, food type and concentration, metabolic demands, assimilation efficiency, and behaviour (Wildish and Kristmanson 1997). Several laboratory studies involving model and live clams have shown that benthic grazers can deplete phytoplankton in the water column (for example, Cole and others 1992). Initially, these studies assumed that the water column remained well mixed above benthic suspension feeders; therefore, parameters measured in the bulk water column were believed to be representative of available particle concentration. For this reason many relationships describing the influence of the bulk flow and bulk seston concentration on benthic grazers physiological processes exist (for example, Levinton 1991). Laboratory measurements using live animals have shown that filtration rates vary with free stream velocity (for example, Levinton 1991). Increases in current speed lead to an increase in filtration rate; however, several studies have shown that filtration may cease at some critical current speed. It has been suggested that resuspension, occurring as a result of high current speeds, may be a factor that negatively affects uptake (Cloern 1987; Levinton 1991). Several mechanisms have been invoked to explain the effects of low speed on growth rates of active suspension feeders. These mechanisms include the formation of a concentration boundary layer and the limiting horizontal flux of seston. It is now accepted that a combination of these factors dictates the growth success of benthic grazers in a particular area. Several field studies have shown that concentration boundary layers can form over benthic ecosystems (for example, Frechette and others 1989, Dolmer 2000); however, many of these studies have failed to measure the hydrodynamics needed to calculate benthic grazing rates. Furthermore, calculating benthic grazing rates with vertical measurements at a single point is problematic due to lack of knowledge of the horizontal gradients in seston (Thompson and others, forthcoming). Despite great improvements in our knowledge on the effects of benthic grazers on seston concentrations in water columns, the effects of different hydrodynamic conditions on grazing rates has not been formulated. This makes it difficult to assess the system-wide effect of the benthic ecosystem on phytoplankton concentrations. Furthermore, it affects our ability to predict the potential success of a benthic species, such as the invasive clams Corbicula fluminea and Potamocorbula amurensis. This paper presents the preliminary results of a control volume approach to elucidate the effect of different hydrodynamic conditions on the grazing rates of Corbicula fluminea.

California↗
USGS1995

Ecosystem responses to phytoplankton blooms - examples from south San Francisco Bay

In 1968, USGS began a program of basic research in San Francisco Bay that has complemented the research and monitoring elements of the Interagency Program. Although the USGS program ranges its focus of study. From year to year, it has elements of continuity because some measurements have been made routinely for decades. One of these elements has been a study of the spring phytoplankton bloom in South San Francisco Bay. Here I present data from multiple sources to explain why such emphasis has been placed on this biological phenomenon.

California↗
USGS1999

A CALFED-supported study of the Delta’s foodweb base

Scientists from six universities and the US Geological Survey (USGS) have begun a new project to characterize the food resource which supports secondary production in different habitats of the Sacramento-San Joaquin Delta. The project is supported by CALFED Category III, USGS, and the IEP; it is designed to answer basic questions about the organic matter which supports biological production at the lowest trophic levels. We know, from the excellent long-term records of IEP agencies, that the abundance of zooplankton (especially native species) has declined dramatically in the past three decades. We do not understand the underlying mechanisms of these declines, but it is likely that they are the result of multiple, interacting stressors. One potential limitation of secondary production could be a sub-optimal food resource, manifested either as low quantity or poor nutritional quality of the available pools of organic matter. Some past studies support this possibility, especially for the case of benthic macroinvertebrates. The project was conceived to do the following: Identify the potential sources of organic matter (for example, phytoplankton, vascular plants, agricultural sources) in different habitats; Determine the relative food quality of each of these different sources for secondary producers, either directly or after microbial processing; and Assess the habitats and environmental conditions that provide the maximum food resources for secondary producers.

Interagency Ecological Program Newsletter↗
USGS2001

Droughts, epic droughts and droughty centuries - lessons from a California paleoclimatic record: a PACLIM 2001 meeting report

During the early 1990s (but echoing studies by S.T. Harding at the University of California, from as early as the 1930s), several lines of paleoclimate evidence in and around the Sierra Nevada Range have provided the water community in California with some real horror stories. By studying ancient tree stumps submerged in Lake Tahoe and Tenaya Lake, stumps that were emerging from Mono Lake during its recent decline, and stumps that were exhumed in the Walker River bed during the floods of 1997, paleoclimatologists like Scott Stine of California State University, Hayward, assembled a picture of epic droughts in the central Sierra Nevada during the medieval period. These droughts had to be severe to drop water levels in the lakes and rivers low enough for the trees to grow in the first place, and then had to last for hundreds of years to explain tree-ring counts in these sizeable stumps. Worse yet, the evidence suggested at least two such epic droughts, one ending close to 1100 and the other close to 1350. These epic droughts challenged paleoclimatologists, as well as modern climatologists and hydrologists, to understand and, ultimately, to determine the likelihood that such droughts might recur in the foreseeable future. The first challenge, however, was to verify that such droughts were more than local events and as extreme as suggested. At this year’s Pacific Climate (PACLIM) Workshop, held March 18–21, 2001, at Asilomar (Pacific Grove, Calif.), special sessions brought together scientists to compare paleoclimatic reconstructions of ancient droughts and pluvial (wet) epidodes to try to determine the nature of decadal and centennial climate fluctuations in western North America, with emphasis on California. A companion session brought together modern climatologists to report on the latest explanations (and evidence) for decadal climate variations during the instrumental era of the 20th century. PACLIM is an annual workshop that, since 1983, has brought together specialists from diverse fields, including physical, social, and biological sciences, to discuss and investigate climate and climate effects in the eastern Pacific and western America. This year’s PACLIM was sponsored by the U.S. Geological Survey, NOAA Office of Global Programs, California Department of Water Resources, and, for the first time, the CALFED Science Program. In addition to the presentations summarized here, sessions at this year’s PACLIM covered topics as varied as the North American monsoon system; recent economic and political effects of California’s climate variations, including a presentation on climate and CALFED by Sam Luoma (U.S. Geological Survey, Menlo Park); and research into daily-to-seasonal weather variations.

Interagency Ecological Program Newsletter↗
USGS1995

Modeling and predicting intertidal variations of the salinity field in the Bay/Delta

San Francisco Bay and the Sacramento/San Joaquin Delta have challenged estuarine modelers for some years. Accurate, broad-scale models of this estuary have been in demand by those concerned with its ecological health and the development of sound management policies. A description and better understanding of the dynamics that govern the bay/delta are complicated by the system's complexity, requiring models that are sophisticated enough to capture the subtle physical processes involved. One approach to simulating daily to monthly variability in the bay is the development of intertidal model using tidally-averaged equations and a time step on the order of the day. An intertidal numerical model of the bay's physics, capable of portraying seasonal and inter-annual variability, would have several uses. Observations are limited in time and space, so simulation could help fill the gaps. Also, the ability to simulate multi-year episodes (eg, an extended drought) could provide insight into the response of the ecosystem to such events. Finally, such a model could be used in a forecast mode wherein predicted delta flow is used as model input, and predicted salinity distribution is output with estimates days and months in advance. This note briefly introduces such a tidally-averaged model (Uncles and Peterson, in press) and a corresponding predictive scheme for baywide forecasting.

California↗
USGS2001

Behind the energetics of the asiatic clam, Potamocorbula amurensis, in San Francisco Bay

The Asian clam (Potamocorbula amurensis) has played a key role in the food web of northern San Francisco Bay since its invasion in the fall of 1986. It has been associated with a dramatic decline in primary production, loss of a zooplankton species and a native mysid shrimp, the probable decline in striped bass, and has introduced alternative pathways for contaminant cycling in the bay food web.

Interagency Ecological Program Newsletter↗
USGS2000

Exposure of delta smelt to dissolved pesticides in 1998 and 1999

Delta smelt is a threatened species in the San Francisco Bay Estuary. Pesticide toxicity is a possible cause for the need to list this fish (Bennett and Moyle 1996; Moyle and others 1996). Numerous pesticides are transported into the estuary from area rivers (MacCoy and others 1995). However, there are minimal data to document the presence, or absence, of pesticides within delta smelt habitat, especially during their vulnerable early life stages. This study, conducted by the U.S. Geological Survey (USGS), documents the occurrence of pesticides within delta smelt habitat; specifically, the length and variability of their potential exposure to multiple dissolved pesticides. This article reviews delta smelt habitat and early life stages followed by an explanation of the study design for assessing pesticide exposure. Results show the co-occurrence of multiple pesticides and delta smelt in their native habitat; these results are presented within the context of possible toxic effects to delta smelt. Finally, the annual variability of pesticide distributions is discussed.

Interagency Ecological Program Newsletter↗
USGS1995

USGS supports ecosystem management in the San Francisco bay and delta

In the past several years, the Department of the Interior has ,l?laced particular emphasis on "ecosystem management" - the integration of scientific knowledge of ecological relationships with resource management practices to sustain ecological, cultural, and economic systems in broad habitat areas; eg., forest, desert, and aquatic habitats. The goal of ecosystem management is to understand the habitat requirements of many species and thereby assess the impact of a variety of human activities on regional biodiversity rather than to manage for individual species. In support of the management of the natural resources of San Francisco Bay and the delta, the USGS is augmenting its ongoing research program to provide additional research, monitoring, and assessment information and to improve the availability of that information. Following a workshop with resource and regulatory agency representatives, hosted by the USGS in early 1994, USGS researchers identified specific areas where existing and new scientific information could contribute to resolving some of the critical bay and delta land and aquatic management issues. The "ecosystems initiative" effort now underway addresses questions in three areas: Freshwater flow, including sediment and contaminant transport. Wetlands. Information and data access. Following is a brief description of activities being supported by this initiative.

Interagency Ecological Program Newsletter↗
USGS1993

Continuous flow measurements using fixed ultrasonic meters

USGS has or soon will be installing four continuous flow-monitoring stations in the delta that will use ultrasonic velocity meters (DVM). Funding for the stations has been provided by USGS, DWR, USBR, and Contra Costa Water District.

Interagency Ecological Program Newsletter↗
USGS1996

Sediment inflow to the delta from the Sacramento and San Joaquin Rivers

USGS routinely measures the daily suspended sediment load entering the delta with the flows of the Sacramento and San Joaquin rivers. Most of the suspended sediment that flows into the delta is carried by these two rivers, but it also enters from Yolo Bypass; the Mokelumne, Calaveras, and Cosumnes rivers; and several smaller streams. This article presents suspended sediment data for the Sacramento and San Joaquin rivers, and compares the data collected during the water year 1995 to statistically analyzed data from the long-term record.

Interagency Ecological Program Newsletter↗
USGS1998

Indirect measurement of Delta outflow using ultrasonic velocity meters and comparison with mass-balance calculated outflow

A measurement of the quantity of water flowing from the Sacramento-San Joaquin Delta into Suisun Bay (Delta outflow) has been desired by those studying and managing the San Francisco Bay/Delta estuary since the 1920s. Historically, Delta outflow has been estimated using a mass-balance calculation that uses measured Delta inflows and exports, and imprecise estimates of consumptive use for the approximately 2,000 small agricultural diversions with the Delta. The DWR has estimated Delta outflow for 1929 to present using the computer program DAYFLOW.

Interagency Ecological Program Newsletter↗
USGS1999

Measured flow and tracer-dye data for spring 1996 and 1997 for the south Sacramento-San Joaquin Delta, California

During the spring of years when the flow of the San Joaquin River is less than 7,000 cubic feet per second (ft 3 /s) a temporary rock barrier is installed by the California Department of Water Resources (DWR) at the head of Old River (HOR) in the south Sacramento-San Joaquin Delta to prevent out migrating salmon in the San Joaquin River from entering Old River and being drawn to the State and federal pumping facilities (Figure 1). The export rate of the pumping facilities also is reduced during these migration periods to minimize the draw of fish to the export facilities through the other channels connected to the San Joaquin River north of the HOR such as Turner Cut, Columbia Cut, and Middle River.

Interagency Ecological Program Newsletter↗
USGS1995

Pathway models could aid management of contaminants

Heavy metal and trace organic contaminants are often cited as factors that could affect the riclmess of the biological community of San Francisco Bay as well as the health of resident organisms. Silver (Ag), selenium (Se), mercury (Hg), copper (Cu), nickel (Ni), chromium (Cr), and cadmium (Cd) are among the trace elements of current regulatory interest. All these elements can be toxic to estuarine organisms in minute quantities. However, understanding their toxicity in nature has proven a difficult challenge. In general, it is difficult to prove how pollutants are affecting ecosystems. The undisturbed "baseline" condition in San Francisco Bay is not always well enough understood to identify whether certain processes are affected or unaffected by contamination. Sources of disturbance (flow diversions, drought, invasion of exotic species, etc.) occur in addition to chemical contamination. Responses to contamination in individual organisms, populations, and commumties are seldom pollutant-specific, and the complex responses to moderate levels of contamination are not well known.

California↗