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Results for “Environmental Research: Ecology”

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At least 37 records · Page 2Linked to original sources
USGS2025

Great Lakes lake trout (Salvelinus namaycush) thiamine monitoring program annual report

Thiamine deficiency in lake trout ( Salvelinus namaycush ) eggs has been linked to early life-stage mortality in the Great Lakes from the 1960s through the 1990s, potentially affecting lake trout recruitment. In response, the U.S. Geological Survey’s Great Lakes Science Center (GLSC), Eastern Ecological Science Center (EESC), and Columbia Environmental Research Center (CERC), and the State University of New York (SUNY) Brockport, in collaboration with partner agencies, initiated a cooperative monitoring program in the late 1990s to assess thiamine concentrations in lake trout eggs. In 2024, egg thiamine concentrations continued to show high variability across sampling sites. No samples with thiamine concentrations below the 4 nmol/g threshold recommended for successful reproduction were observed in Lakes Superior or Huron. In contrast, between 11% and 88% of lake trout sampled from sites in Lakes Michigan, Ontario, Champlain, and the Finger Lakes had egg thiamine concentrations below this critical threshold. Time series data revealed substantial temporal and spatial variation in mean lake trout egg thiamine concentrations across the Great Lakes region.

Finger Lakes, Great Lakes, Lake Champlain↗
USGS2020

Assessment of existing groundwater quality data in the Green-Duwamish watershed, Washington

The United States Geological Survey (USGS) provided technical support to the Washington Department of Ecology (Ecology) in their assessment of the role groundwater plays in contributing pollutant loading to the Green-Duwamish River near Seattle, Washington. Ecology is developing watershed hydrology models of the Green-Duwamish watershed, and need to assign realistic contaminant concentrations to the various Hydrologic Response Units represented in their models. The USGS compiled existing groundwater quality data in the Green-Duwamish watershed, and this report summarizes results and interpretation of the dataset, including identifying data gaps and needs for further research and monitoring. The sources of existing data were the USGS’s National Water Information System, Ecology’s Environmental Information Management System, and a compilation of several studies by Leidos, a scientific research company. The water-quality parameters of interest included polychlorinated biphenyl (PCB) Aroclors and congeners, phthalates, carcinogenic polycyclic aromatic hydrocarbons (cPAHs), arsenic, copper, and zinc. Results were grouped into the four subwatersheds delineated in Ecology’s hydrology models: Duwamish, Lower Green, Soos, and Upper Green. Results from the Duwamish subwatershed were further sub-divided by the USGS into the Lower Duwamish, containing land adjacent to the Lower Duwamish Waterway Superfund site, and the Upper Duwamish, containing the remaining area of the Duwamish subwatershed. Groundwater quality data in the Lower Duwamish were treated separately because there is known contamination in this area. The availability of water quality data varied by subwatershed as follows: phthalate data was only available within the Duwamish, PCB data was available within the Duwamish and Lower Green, cPAH data was available within the Duwamish, Lower Green, and Soos, and data for arsenic, copper, and zinc were available within all four subwatersheds. More than 99 percent of the available data was within the Duwamish subwatershed, identifying a need for additional monitoring of groundwater quality in the other subwatersheds.

Washington↗
USGS2019

Ecosystem function and services of aquatic predators in the Anthropocene

Arguments for the need to conserve aquatic predator (AP) populations often focuses on the ecological and socio-economic roles they play. Here, we summarize the diverse ecosystem functions and services connected to APs, including regulating food webs, cycling nutrients, engineering habitat, transmitting diseases/parasites, mediating ecological invasions, effecting climate, supporting fisheries, generating tourism, and providing bioinspiration. In some cases, human-driven declines and increases in AP populations have altered these ecosystem functions and services. We present a Social Ecological Framework for supporting adaptive management decisions involving APs in response to social and environmental change. We also identify outstanding questions to guide future research on the ecological functions and ecosystem services of APs in a changing world

Trends in Ecology and Evolution↗
USGS2001

Developing landscape-indicator models for pesticides and nutrients in streams of the Mid-Atlantic Coastal Plain

Collaborative research between the U.S. Environmental Protection Agency (USEPA), Landscape Ecology Branch, and the U.S. Geological Survey (USGS) began in 1999 to relate land use, geology, and other geographic variables to water quality and aquatic ecology in small streams of the Mid-Atlantic Coastal Plain. Results of the study will include landscape-indicator models (see inset) for stream ecological condition and for concentrations of pesticides and nutrients in ground water discharging to small streams. A base network of 174 small (typically first-order) streams was designed across a gradient of hydrogeologic and land-use settings. Additional sites were selected to represent natural watershed conditions and to relate results from the base network to downstream conditions and seasonal hydrologic variability. Benthic-community and habitat assessments were conducted at each stream; water samples from all streams were analyzed for selected pesticides, pesticide metabolites, nutrients, and major ions.

Fact Sheet↗
USGS2022

Eastern Ecological Science Center — Fish and aquatic animal health

Science provided by the U.S. Geological Survey (USGS) Eastern Ecological Science Center (EESC) helps to protect fish and aquatic animal health and support disease management of our Nation’s fisheries and aquatic animal populations. Our capabilities and expertise span diverse, yet highly integrated disciplines related to all aspects of biology, ecology, and animal health. Our scientists work to identify novel and emerging pathogens and diseases to assess fish and aquatic animal responses to parasites, pathogens, adverse environmental conditions, and chemical exposures. Eastern Ecological Science Center research is conducted both in laboratories and in the field in various aquatic environments ranging from headwater streams to the ocean. The EESC team provides science leadership and support for fisheries and aquatic species specialists nationwide.

Fact Sheet↗
USGS2018

Biology and impacts of Pacific Islands invasive species. 14. Sus scrofa the feral pig (Artiodactyla: Suidae)

Feral pigs ( Sus scrofa L.) are perhaps the most abundant, widespread, and economically significant large introduced vertebrate across the Pacific island region. Unlike many other nonnative invasive species, feral pigs have both cultural and recreational importance in the region, complicating their management. Today, Pacific island feral pigs are a mixture of several strains of domestic swine, Asiatic wild boar, and European wild boar. Due to their generalist diet and rooting behavior, feral pigs alter soils and watersheds and negatively impact native and nonnative flora and fauna. As a result, feral pigs have played a role in the extinction of several species of plants and animals on Pacific islands and have negative effects on both ecotourism and agricultural industries in the region. Despite numerous published studies on feral pigs in the Pacific island region, of which the majority include systematic analyses of original empirical data, some fundamental aspects of feral pig ecology remain poorly characterized, at least partly due to the remote and inaccessible environments that they often inhabit. To address these knowledge gaps, effort should be made to integrate research conducted outside the Pacific island region into local management strategies. This review summarizes the origins, history, ecology, environmental effects, and current management of feral pigs in the Pacific island region; integrates regional scientific findings with those of other insular and continental systems; and identifies current knowledge gaps requiring further research to inform the ecology and management of this impactful invasive species.

Hawai'i↗
USGS2005

Development of ecological indicator guilds for land management

Agency land-use must be efficiently and cost-effectively monitored to assess conditions and trends in ecosystem processes and natural resources relevant to mission requirements and legal mandates. Ecological Indicators represent important land management tools for tracking ecological changes and preventing irreversible environmental damage in disturbed landscapes. The overall objective of the research was to develop both individual and integrated sets (i.e., statistically derived guilds) of Ecological Indicators to: quantify habitat conditions and trends, track and monitor ecological changes, provide early warning or threshold detection, and provide guidance for land managers. The derivation of Ecological Indicators was based on statistical criteria, ecosystem relevance, reliability and robustness, economy and ease of use for land managers, multi-scale performance, and stress response criteria. The basis for the development of statistically based Ecological Indicators was the identification of ecosystem metrics that analytically tracked a landscape disturbance gradient.

Report↗
USGS2025

Integrating theory and empirical patterns: Fish body size distributions, life history traits, and environmental flows in streams

Individual size distributions (ISDs) are prominent in ecological research and may support resource managers with ecosystem-scale objectives. We use a database of individual size measurements for US stream fishes to test for direct and indirect effects of traits, flow regimes, and land use on the interspecific ISD exponent. Path analysis indicates that traits have strong, direct effects on ISD. Flow and land use effects on the exponent are largely indirectly mediated by their influences on species traits. ISD exponents increase (abundances of larger-bodied individuals increase, relative to smaller-bodied) when environments favor higher trophic levels, warmer thermal tolerances, and periodic life histories. Alternatively, ISD exponents decrease in systems that favor opportunistic life histories. Our flexible modeling framework that includes direct and indirect effects of traits, flow regimes, and land use on ISD could be expanded to incorporate additional variables that interact with flow (e.g., temperature and physical habitat) to assess of effects of multiple stressors on aquatic ecosystem functioning.

Science Advances↗
USGS2026

The Zooplankton International Geospatial (ZIG) dataset: A global repository of spatiotemporal freshwater zooplankton community composition data from lakes and reservoirs to support ecological research

Zooplankton transfer substantial energy in aquatic food webs and are used as indicators of environmental change. Syntheses of zooplankton community dynamics globally require datasets that span a wide range of environmental gradients; however, these datasets are limited due to methodological differences across programs, taxonomic inconsistencies, and a lack of standardized metadata. To reconcile these challenges, we created the Zooplankton International Geospatial (ZIG) dataset, which includes original zooplankton, water physical and chemical variables, and lake morphometric data from 311 inland lakes and reservoirs. ZIG includes waterbodies ranging in size from 0.005 to 82,100 km 2 and spanning broad latitudinal (−47.26 to 64.90) and longitudinal ranges (−165.04 to 176.53). Temporal coverage for individual waterbodies ranges between 1 and 60 yr with sampling frequency ranging from annually to weekly. With its extensive coverage and content, we consider ZIG to be a cornerstone for future investigations of global scale lake biodiversity change.

Limnology & Oceanography - Letters↗
USGS2018

Characterizing the sponge grounds of Grays Canyon, Washington, USA

Deep-sea sponge grounds are relatively understudied ecosystems that may provide key habitats for a large number of fish and invertebrates including commercial species. Glass sponge grounds have been discovered from the tropics to polar regions but there are only a few places with high densities of dictyonine sponges. Dictyonine glass sponges have a fused skeleton, which stays intact when they die and in some areas the accumulation of successive generations of sponges leads to the formation of reefs. In 2010 and 2016, we surveyed an area near Grays Canyon in Washington, USA, where dense aggregations of glass sponges and potential sponge reefs were discovered in 2007. Our primary aims were to make a preliminary assessment of whether the glass sponges form reefs at this location, characterize the sponge assemblage present at this site and examine associations between the sponges and commercially important species. Multibeam mapping and sub-bottom profiling indicate that the glass sponges at this site do not form reefs and are mostly attached to hard substrates. Analysis of photographs collected by an autonomous underwater vehicle and samples collected by a remotely operated vehicle guided by telepresence revealed the presence of two abundant dictyonine sponge species at this site, Heterochone calyx and Aphrocallistes vastus (mean densities = 1.43 ± 0.057 per 10 m2, max = 24 per 10 m2). We also observed a large number of non-reef-building glass sponges and various demosponges including a potentially new species in the genus Acarnus. A diverse fish assemblage was recorded at this site including eight species of rockfish. Rockfish abundance was positively related to sponge abundance. Spot prawns (Pandalus platyceros) were also abundant and were strongly associated with sponges. Despite not finding sponge reefs, this is an ecologically significant area. Further research is necessary to determine the environmental factors that give rise to the abundance of large dictyonine sponges at this location and also to determine if other similar sponge grounds exist along the west coast of the United States.

Washington↗
USGS1998

Geospatial Technology Applications and Infrastructure in the Biological Resources Division

Executive Summary -- Automated spatial processing technology such as geographic information systems (GIS), telemetry, and satellite-based remote sensing are some of the more recent developments in the long history of geographic inquiry. For millennia, humankind has endeavored to map the Earth's surface and identify spatial relationships. But the precision with which we can locate geographic features has increased exponentially with satellite positioning systems. Remote sensing, GIS, thematic mapping, telemetry, and satellite positioning systems such as the Global Positioning System (GPS) are tools that greatly enhance the quality and rapidity of analysis of biological resources. These technologies allow researchers, planners, and managers to more quickly and accurately determine appropriate strategies and actions. Researchers and managers can view information from new and varying perspectives using GIS and remote sensing, and GPS receivers allow the researcher or manager to identify the exact location of interest. These geospatial technologies support the mission of the U.S. Geological Survey (USGS) Biological Resources Division (BRD) and the Strategic Science Plan (BRD 1996) by providing a cost-effective and efficient method for collection, analysis, and display of information. The BRD mission is 'to work with others to provide the scientific understanding and technologies needed to support the sound management and conservation of our Nation's biological resources.' A major responsibility of the BRD is to develop and employ advanced technologies needed to synthesize, analyze, and disseminate biological and ecological information. As the Strategic Science Plan (BRD 1996) states, 'fulfilling this mission depends on effectively balancing the immediate need for information to guide management of biological resources with the need for technical assistance and long-range, strategic information to understand and predict emerging patterns and trends in ecological systems.' Information sharing plays a key role in nearly everything BRD does. The Strategic Science Plan discusses the need to (1) develop tools and standards for information transfer, (2) disseminate information, and (3) facilitate effective use of information. This effort centers around the National Biological Information Infrastructure (NBII) and the National Spatial Data Infrastructure (NSDI), components of the National Information Infrastructure. The NBII and NSDI are distributed electronic networks of biological and geographical data and information, as well as tools to help users around the world easily find and retrieve the biological and geographical data and information they need. The BRD is responsible for developing scientifically and statistically reliable methods and protocols to assess the status and trends of the Nation's biological resources. Scientists also conduct important inventory and monitoring studies to maintain baseline information on these same resources. Research on those species for which the Department of the Interior (DOI) has trust responsibilities (including endangered species and migratory species) involves laboratory and field studies of individual animals and the environments in which they live. Researchboth tactical and strategicis conducted at the BRD's 17 science centers and 81 field stations, 54 Cooperative Fish and Wildlife Research Units in 40 states, and at 11 former Cooperative Park Study Units. Studies encompass fish, birds, mammals, and plants, as well as their ecosystems and the surrounding landscape. Biological Resources Division researchers use a variety of scientific tools in their endeavors to understand the causes of biological and ecological trends. Research results are used by managers to predict environmental changes and to help them take appropriate measures to manage resources effectively. The BRD Geospatial Technology Program facilitates the collection, analysis, and dissemination of data and informat

Information and Technology Report↗
USGS2025

Ranking river basins for stream temperature research and monitoring in the contiguous United States

There is a need to prioritize research and data collection in river basins by integrating information from environmental, ecological, and socioeconomic datasets to maintain acceptable water quality for human uses and ecosystem health. Multiple anthropogenic and natural stressors are responsible for driving changes in stream temperatures that can alter ecosystems and degrade water quality. These stressors are variable spatially and temporally, which can be challenging for prioritizing monitoring and research. In this study, an evaluation of variables related to stream temperature was performed for 163 candidate basins of the contiguous United States to highlight potential focal areas. Thirty variables were combined in six components: anthropogenic forcing, natural forcing, climate change, ecological sensitivity, socioeconomic sensitivity, and data availability. The components were incorporated into three themes: vulnerability of streams to thermal change, vulnerability of ecosystems, and vulnerability of communities. By evaluating each theme separately, patterns of vulnerability and potential resiliency were identified as well as consistency in ranks within the themes. For example, results of the national scale ranking indicated the Southern California Coastal basin (within California-Nevada region) was the highest-ranking priority in vulnerability of streams to thermal change and vulnerability of ecosystems. The analysis also identified vulnerable basins with gaps in monitoring. For example, the Missouri-Oahe basin (within the Northern High Plains region) was the highest-ranking priority for vulnerable communities with limitations in data availability. The ranking approach provides insight into basins that are resilient and are ideal candidates for monitoring and research.

Journal of Hydrology↗
USGS2023

Achieving success with RISE: A widely implementable, iterative, structured process for mastering interdisciplinary team science collaborations

Scientific experts from different disciplines often struggle to mesh their specialized perspectives into the shared mindset that is needed to address difficult and persistent environmental, ecological, and societal problems. Many traditional graduate programs provide excellent research and technical skill training. However, these programs often do not teach a systematic way to learn team skills, nor do they offer a protocol for identifying and tackling increasingly integrated interdisciplinary (among disciplines) and transdisciplinary (among researchers and stakeholders) questions. As a result, professionals trained in traditional graduate programs (e.g., current graduate students and employed practitioners) may not have all of the collaborative skills needed to advance solutions to difficult scientific problems. In the present article, we illustrate a tractable, widely implementable structured process called RISE that accelerates the development of these missing skills. The RISE process (Route to Identifying, learning, and practicing interdisciplinary and transdisciplinary team Skills to address difficult Environmental problems) can be used by diverse teams as a tool for research, professional interactions, or training. RISE helps professionals with different expertise learn from each other by repeatedly asking team-developed questions that are tested using an interactive quantitative tool (e.g., agent-based models, machine learning, case studies) applied to a shared problem framework and data set. Outputs from the quantitative tool are then discussed and interpreted as a team, considering all team members’ perspectives, disciplines, and expertise. After this synthesis, RISE is repeated with new questions that the team jointly identified in earlier data interpretation discussions. As a result, individual perspectives, originally informed by disciplinary training, are complemented by a shared understanding of team function and elevated interdisciplinary knowledge.

BioScience↗
USGS2026

Co-producing coastal bird research on the Gulf Coast through structured decision making (SDM) and constructed value of information (CVoI)

Conservation practitioners face the complex challenge of addressing global biodiversity threats within social-ecological systems with multiple jurisdictions, numerous interest groups, and changing environmental conditions. Bridging the research-to-implementation gap between scientists and managers, which integrates diverse perspectives that represent the variety of considerations impacting management outcomes can help to inform efficient and effective conservation. Avian conservation programs along the U.S. Gulf Coast exemplify these challenges, as management decisions must address diverse threats to declining coastal bird populations across large breeding, wintering, and migratory ranges while facing uncertainty surrounding the efficacy of large-scale strategies. This provides opportunities for improving management through co-produced research with structured decision making (SDM). We present a case study that demonstrates the application of co-production principles and SDM to collaboratively develop high-priority research questions informing effective avian conservation and management. Additionally, we applied a constructed value of information (CVoI) framework to identify and prioritize which uncertainties to reduce and better understand how research questions impact management actions. The integration of SDM’s five-step decision making framework ensured key principles of co-production were met, while co-production enhanced SDM outcomes by incorporating diverse perspectives and knowledge bases. CVoI further allowed participants to collectively determine final high-priority research questions in the face of complexity and uncertainty. Together, these approaches supported co-produced knowledge-generation, strategic hypothesis prioritization, and identification of research questions most likely to improve conservation decisions. This case study from the U.S. Gulf Coast demonstrates how co-produced research through SDM offers a broadly applicable approach for navigating ecological complexity and bridging the research-to-implementation gap in avian conservation.

Gulf Coast↗
USGS2025

Supporting dryland restoration success with applied ecological forecasting of seeding outcomes

Introduction Ecological restoration is increasingly used to sustain biodiversity and ecosystem services. In drylands of the western United States (US), post-disturbance restoration often involves seeding treatments to promote the recovery of native plant communities. Spatial and temporal variability in environmental conditions influences plant establishment and contributes to low restoration success in certain locations and years. Objectives Here, we discuss how forecasts for plant establishment can be developed and delivered to help land managers anticipate the impacts of near-term (months to years) environmental conditions on restoration. Methods We developed an ecological forecast system that predicts the outcome of restoration seeding by integrating weather forecasts, an ecosystem water balance model, and plant establishment models. Results In this article, we focus on a conceptual approach to developing, delivering, and applying ecological forecasts for restoration. We illustrate the potential of this approach by adapting existing ecological models to build an initial version of a decision support tool that delivers a species-specific ecological forecast for big sagebrush ( Artemisia tridentata ) establishment. Integrating ecological forecasts into plans for restoration seeding presents opportunities to anticipate and account for environmental variability. Conclusions Finally, we discuss how connecting research, forecast delivery, and management can maximize the impact of ecological forecasts on restoration success.

Idaho, Nevada↗
USGS2022

Site fidelity as a maladaptive behavior in the Anthropocene

Site fidelity, or the behavior of returning to previously visited locations, has been observed across taxa and ecosystems. By developing familiarity with a particular location, site fidelity provides a range of benefits and is advantageous in stable or predictable environments. However, the Anthropocene is characterized by rates of environmental change that outpace the evolutionary history of extant taxa, which can result in site fidelity becoming maladaptive. Here we outline the theoretical underpinnings for maladaptive site fidelity and synthesize empirical research supporting its occurrence, and examine it in the context of a related concept, ecological traps, whereby organisms exhibit maladaptive behavior in habitat selection. We then discuss adaptive mechanisms that may enable species with site fidelity to continue to persist in the Anthropocene. With ongoing environmental change, researchers and practitioners should expect fidelity-induced ecological traps to become more common, and initiate projects to identify and understand their origins. Such knowledge will help conserve the widespread and ecologically important behavior of site fidelity.

Frontiers in Ecology and the Environment↗
USGS2026

Advances and applications of Unoccupied Aerial Systems (UAS) research in landscape ecology

Landscape ecologists have long depended on satellite and aerial remote sensing to address questions about landscape pattern and process, structure, and change (Foody 2023 ). Unoccupied aerial systems/vehicles (UAS/UAV, a.k.a. drones) technology is becoming an increasingly popular research tool in environmental sciences allowing scientists to generate low-cost, high-quality, and high-resolution imagery on demand that can be tailored to specific research questions. While satellite data are of a fixed resolution and temporal interval, UAS offer researchers control and flexibility to design studies and collect data at resolutions and scales that provide ecologically relevant information at finer spatial resolutions (e.g., < 30 cm) than what is currently available from satellite platforms (typically > 3m), thus helping capture objects such as individual plant canopies, micro-topography, and individual animals. Unlike satellites with fixed orbits, UAS can be deployed at more optimal temporal frequencies for ecological monitoring. We organized the special collection “Advances and Applications of Unoccupied Aerial Systems (UAS) Research in Landscape Ecology” to showcase the many ways that UAS tools and technologies are currently applied to advance landscape ecological research. When we announced the collection in 2023, only 11 papers published in the journal Landscape Ecology used UAS data, which was a notably small number compared to many other general ecology, environmental science and remote sensing journals. In an attempt to understand why UAS were not more widely used in landscape ecology and provide possible solutions, we published a review article (Villarreal et al. 2025) that identified the challenges, knowledge gaps, and obstacles for the adoption of UAS technologies in landscape ecology research. The main issues we identified include: (1) an abundance of UAS methods papers in the existing literature, with comparatively few studies demonstrating how UAS can be applied to address ecological questions; (2) a perceived scale mismatch between the geographic extent of UAS data collection (local) compared to larger study areas (landscapes) and a need to design robust scaling approaches to connect fine-scale UAS data with broader ecological patterns; and (3) a need for improved integration of UAS data with other commonly used remote sensing datasets including historical high resolution aerial imagery. Additionally, researchers new to UAS remote sensing may be discouraged or overwhelmed by the general lack of scientific consensus and standardized protocols for typical tasks such as data collection, vegetation classification, and change detection, as well as restrictive and/or confusing policy, regulatory, and legal issues surrounding UAS operations (Villarreal et al. 2025).

Landscape Ecology↗
USGS2018

“Naturalness” in designated Wilderness: Long-term changes in non-native plant dynamics on campsites, Boundary Waters, Minnesota

Wilderness areas in the United States are preserved for their untrammeled naturalness and opportunities for unconfined recreation. The Boundary Waters Canoe Area Wilderness has these qualities, but long-term recreation visitation pressures on campsites can cause significant ecological changes. This article explores changes on campsites, specifically examining non-native plant ecology over 3 decades. The research replicates a 1982 study analyzing vegetation composition and cover on campsites and environmentally paired controls. Camping activities have removed substantial tree cover on campsites, altering their ecological conditions and perceived wilderness character. Over the span of 32 years, the number of non-native plant species found on campsites has not risen, although their mean relative cover has increased significantly and they have spread to more sites. Of the 23 non-native herbs and grasses found on the campsites, only Cirsium arvense is considered a noxious weed by the state of Minnesota. Other noninvasive, non-native plants fall into a gray area in the context of "naturalness" for an area protected as Wilderness because they provide some positive ecological services even as they degrade wilderness character. Thus, wilderness managers face a difficult challenge in coping with the long-term impacts of visitor use on wilderness conditions and character.

Minnesota↗