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A climate trend analysis of Uganda

This brief report, drawing from a multi-year effort by the U.S. Agency for International Development (USAID) Famine Early Warning Systems Network (FEWS NET), identifies observed changes in rainfall and temperature in Uganda, based on an analysis of a quality-controlled, long time series of station observations throughout Uganda. Extending recent trends forward, it also provides a current and near-future context for understanding the actual nature of climate change impacts in the country, and a basis for identifying climate adaptations that may protect and improve the country's food security.

Fact Sheet↗

Public review draft: A method for assessing carbon stocks, carbon sequestration, and greenhouse-gas fluxes in ecosystems of the United States under present conditions and future scenarios

The Energy Independence and Security Act of 2007 (EISA), Section 712, authorizes the U.S. Department of the Interior to develop a methodology and conduct an assessment of the Nation's ecosystems focusing on carbon stocks, carbon sequestration, and emissions of three greenhouse gases (GHGs): carbon dioxide, methane, and nitrous oxide. The major requirements include (1) an assessment of all ecosystems (terrestrial systems, such as forests, croplands, wetlands, shrub and grasslands; and aquatic ecosystems, such as rivers, lakes, and estuaries), (2) an estimation of annual potential capacities of ecosystems to increase carbon sequestration and reduce net GHG emissions in the context of mitigation strategies (including management and restoration activities), and (3) an evaluation of the effects of controlling processes, such as climate change, land use and land cover, and wildlfires. The purpose of this draft methodology for public review is to propose a technical plan to conduct the assessment. Within the methodology, the concepts of ecosystems, carbon pools, and GHG fluxes used for the assessment follow conventional definitions in use by major national and international assessment or inventory efforts. In order to estimate current ecosystem carbon stocks and GHG fluxes and to understand the potential capacity and effects of mitigation strategies, the method will use two time periods for the assessment: 2001 through 2010, which establishes a current ecosystem GHG baseline and will be used to validate the models; and 2011 through 2050, which will be used to assess future potential conditions based on a set of projected scenarios. The scenario framework is constructed using storylines of the Intergovernmental Panel on Climate Change (IPCC) Special Report Emission Scenarios (SRES), along with initial reference land-use and land-cover (LULC) and land-management scenarios. An additional three LULC and land-management mitigation scenarios will be constructed for each storyline to enhance carbon sequestration and reduce GHG fluxes in ecosystems. Input from regional experts and stakeholders will be solicited to construct realistic and meaningful scenarios. The methods for mapping the current LULC and ecosystem disturbances will require the extensive use of both remote-sensing data and in-situ (for example, forest inventory data) to capture and characterize landscape-change events. For future potential LULC and ecosystem disturbances, key drivers such as socioeconomic, policy, and climate assumptions will be used in addition to biophysical data. The product of these analyses will be a series of maps for each future year for each scenario. These annual maps will form the basis for estimating carbon storage and GHG emissions. For terrestrial ecosystems, carbon storage, carbon-sequestration capacities, and GHG emissions under the current and projected future conditions will be assessed using the LULC and ecosystem-disturbance estimates in map format with a spatially explicit biogeochemical ensemble modeling system that incorporates properties of management activities (such as tillage or harvesting) and properties of individual ecosystems (such as elevation, vegetation characteristics, and soil attributes). For aquatic ecosystems, carbon burial in sediments and GHG fluxes are functions of the current and projected future stream flow and sediment transports, and therefore will be assessed using empirical modeling methods. Validation and uncertainty analysis methods described in the methodology will follow established guidelines to assess the quality of the assessment results. The U.S. Environmental Protection Agency's Level II ecoregions map (which delineates 24 ecoregions for the Nation) will be the practical instrument for developing and delivering assessment results. Consequently, the ecoregion will be the reporting unit of the assessment because the mitigation scenarios, assessment results, validation, and uncertainty analysis will be

Open-File Report↗

A method for assessing carbon stocks, carbon sequestration, and greenhouse-gas fluxes in ecosystems of the United States under present conditions and future scenarios

he Energy Independence and Security Act of 2007 (EISA), Section 712, mandates the U.S. Department of the Interior to develop a methodology and conduct an assessment of the Nation’s ecosystems, focusing on carbon stocks, carbon sequestration, and emissions of three greenhouse gases (GHGs): carbon dioxide, methane, and nitrous oxide. The major requirements include (1) an assessment of all ecosystems (terrestrial systems, such as forests, croplands, wetlands, grasslands/shrublands; and aquatic ecosystems, such as rivers, lakes, and estuaries); (2) an estimate of the annual potential capacities of ecosystems to increase carbon sequestration and reduce net GHG emissions in the context of mitigation strategies (including management and restoration activities); and (3) an evaluation of the effects of controlling processes, such as climate change, land-use and land-cover change, and disturbances such as wildfires. The concepts of ecosystems, carbon pools, and GHG fluxes follow conventional definitions in use by major national and international assessment or inventory efforts. In order to estimate current ecosystem carbon stocks and GHG fluxes and to understand the potential capacity and effects of mitigation strategies, the method will use two time periods for the assessment: 2001 through 2010, which establishes a current ecosystem carbon and GHG baseline and will be used to validate the models; and 2011 through 2050, which will be used to assess potential capacities based on a set of scenarios. The scenario framework will be constructed using storylines of the Intergovernmental Panel on Climate Change (IPCC) Special Report on Emission Scenarios (SRES), along with both reference and enhanced land-use and land-cover (LULC) and land-management parameters. Additional LULC and land-management mitigation scenarios will be constructed for each storyline to increase carbon sequestration and reduce GHG fluxes in ecosystems. Input from regional experts and stakeholders will be solicited to construct these scenarios. The methods for mapping the current LULC and ecosystem disturbances will require the extensive use of both remote-sensing data and field-survey data (for example, forest inventories) to capture and characterize landscape-changing events. For potential LULC changes and ecosystem disturbances, key drivers such as socioeconomic and climate changes will be used in addition to the biophysical data. The result of these analyses will be a series of maps for each future year for each scenario. These annual maps will form the basis for estimating carbon storage and GHG emissions. For terrestrial ecosystems, carbon storage, carbon-sequestration capacities, and GHG emissions under the present conditions and future scenarios will be assessed using the LULC-change and ecosystem-disturbance estimates in map format with a spatially explicit biogeochemical ensemble modeling system that incorporates properties of management activities (such as tillage or harvesting) and properties of individual ecosystems (such as energy exchange, vegetation characteristics, hydrological cycling, and soil attributes). For aquatic ecosystems, carbon burial in sediments and fluxes of GHG are functions of the present and future potential stream flow and sediment transport and will be assessed using empirical hydrological modeling methods. Validation and uncertainty analysis methods described in the methodology will follow established guidelines to assess the quality of the assessment results. The U.S. Environmental Protection Agency’s Level II ecoregions map will be the practical instrument for developing and delivering assessment results. Consequently, the ecoregion (there are 22 modified ecoregions) will be the reporting unit of the assessment because the scenarios, assessment results, validation, and uncertainty analysis will be produced at that scale. The implementation of these methods will require collaborations among various Federal agencies, State agencies, nongovernmental organizations, and the science community. Using the method described in this document, the assessment can be completed in approximately 3 to 4 years. The primary deliverables will be assessment reports containing tables, charts, and maps that will present the estimated GHG parameters annually for 2001 through 2050 by ecosystem, pool, and scenario. The results will permit the evaluation of a range of policies, mitigation options, and research topics, such as the demographic, LULC-change, or climate-change effects on carbon stocks, carbon sequestration, and GHG fluxes in ecosystems.

Scientific Investigations Report↗

Altitudinal migration and the future of an iconic Hawaiian honeycreeper in response to climate change and management

Altitudinal movement by tropical birds to track seasonally variable resources can move them from protected areas to areas of increased vulnerability. In Hawaiʻi, historical reports suggest that many Hawaiian honeycreepers such as the ‘I‘iwi ( Drepanis coccinea ) once undertook seasonal migrations, but the existence of such movements today is unclear. Because Hawaiian honeycreepers are highly susceptible to avian malaria, currently minimal in high-elevation forests, understanding the degree to which honeycreepers visit lower elevation forests may be critical to predict the current impact of malaria on population dynamics and how susceptible bird populations may respond to climate change and mitigation scenarios. Using radio telemetry data, we demonstrate for the first time that a large fraction of breeding adult and juvenile ‘I‘iwi originating from an upper-elevation (1,920 m) population at Hakalau Forest National Wildlife Refuge exhibit post-breeding movements well below the upper elevational limit for mosquitoes. Bloom data suggest seasonal variation in floral resources is the primary driver of seasonal movement for ‘I‘iwi. To understand the demographic implications of such movement, we developed a spatial individual-based model calibrated using previously published and original data. ʻI‘iwi dynamics were simulated backward in time, to estimate population levels in the absence of avian malaria, and forward in time, to assess the impact of climate warming as well as two potential mitigation actions. Even in disease-free ‘refuge’ populations, we found that breeding densities failed to reach the estimated carrying capacity, suggesting the existence of a seasonal “migration load” as a result of travel to disease-prevalent areas. We predict that ‘I‘iwi may be on the verge of extinction in 2100, with the total number of pairs reaching only ~ 0.2–12.3% of the estimated pre-malaria density, based on an optimistic climate change scenario. The probability of extinction of ‘I‘iwi populations, as measured by population estimates for 2100, is strongly related to their estimated migration propensity. Long-term conservation strategies likely will require a multi-pronged response including a reduction of malaria threats, habitat restoration and continued landscape-level access to seasonally variable nectar resources.

Ecological Monographs↗

Climate change and tree-line ecosystems in the Sierra Nevada: Habitat suitability modelling to inform high-elevation forest dynamics monitoring

Whitebark pine and foxtail pine serve foundational roles in the subalpine zone of the Sierra Nevada. They provide the dominant structure in tree-line forests and regulate key ecosystem processes and community dynamics. Climate change models suggest that there will be changes in temperature regimes and in the timing and magnitude of precipitation within the current distribution of these species, and these changes may alter the species’ distributional limits. Other stressors include the non-native pathogen white pine blister rust and mountain pine beetle, which have played a role in the decline of whitebark pine throughout much of its range. The National Park Service is monitoring status and trends of these species. This report provides complementary information in the form of habitat suitability models to predict climate change impacts on the future distribution of these species within Sierra Nevada national parks. We used maximum entropy modeling to build habitat suitability models by relating species occurrence to environmental variables. Species occurrence was available from 328 locations for whitebark pine and 244 for foxtail pine across the species’ distributions within the parks. We constructed current climate surfaces for modeling by interpolating data from weather stations. Climate surfaces included mean, minimum, and maximum temperature and total precipitation for January, April, July, and October. We downscaled five general circulation models for the 2050s and the 2090s from ~125 km2 to 1 km2 under both an optimistic and an extreme climate scenario to bracket potential climatic change and its influence on projected suitable habitat. To describe anticipated changes in the distribution of suitable habitat, we compared, for each species, climate scenario, and time period, the current models with future models in terms of proportional change in habitat size, elevation distribution, model center points, and where habitat is predicted to expand or contract. Overall, models indicated that suitable habitats for whitebark and foxtail pine are more likely to shift geographically within the parks by 2100 rather than decline precipitously. This implies park managers might focus conservation efforts on stressors other than climate change, working toward species resilience in the face of threats from introduced disease and elevated native insect damage. More specifically, further understanding of the incidence and severity of white pine blister rust and other stressors in high elevation white pines would help assess vulnerability from threats other than climate change.

California↗

Causal mechanisms of soil organic matter decomposition: Deconstructing salinity and flooding impacts in coastal wetlands

Coastal wetlands significantly contribute to global carbon storage potential. Sea-level rise and other climate change-induced disturbances threaten coastal wetland sustainability and carbon storage capacity. It is critical that we understand the mechanisms controlling wetland carbon loss so that we can predict and manage these resources in anticipation of climate change. However, our current understanding of the mechanisms that control soil organic matter decomposition, in particular the impacts of elevated salinity, are limited, and literature reports are contradictory. In an attempt to improve our understanding of these complex processes, we measured root and rhizome decomposition and developed a causal model to identify and quantify the mechanisms that influence soil organic matter decomposition in coastal wetlands that are impacted by sea-level rise. We identified three causal pathways: 1) a direct pathway representing the effects of flooding on soil moisture, 2) a direct pathway representing the effects of salinity on decomposer microbial communities and soil biogeochemistry, and 3) an indirect pathway representing the effects of salinity on litter quality through changes in plant community composition over time. We used this model to test the effects of alternate scenarios on the response of tidal freshwater forested wetlands and oligohaline marshes to short- and long-term climate-induced disturbances of flooding and salinity. In tidal freshwater forested wetlands, the model predicted less decomposition in response to drought, hurricane salinity pulsing, and long-term sea-level rise. In contrast, in the oligohaline marsh, the model predicted no change in response to sea-level rise, and increased decomposition following a drought or a hurricane salinity pulse. Our results show that it is critical to consider the temporal scale of disturbance and the magnitude of exposure when assessing the effects of salinity intrusion on carbon mineralization in coastal wetlands. Here we identify three causal mechanisms that can reconcile disparities between long-term and short-term salinity impacts on organic matter decomposition.

Ecology↗

A climate trend analysis of Chad

This brief report, drawing from a multi-year effort by the U.S. Agency for International Development (USAID) Famine Early Warning Systems Network (FEWS NET), identifies significant decreases in rainfall and increases in air temperature across Chad, especially in the eastern part of the country. These analyses are based on quality-controlled station observations. Conclusions: * Summer rains have decreased in eastern Chad during the past 20 years. * Temperatures have increased by 0.8 °Celsius since 1975, amplifying the effect of droughts. * Crop yields are very low and stagnant. * The amount of farmland per person is low, and decliningrapidly.* Population growth combined with stagnating yieldscould lead to a 30 percent reduction in per capita cereal production by 2025.* In many cases, areas with changing climate are coincident with zones of substantial conflict, indicating some degree of association; however, the contribution of climate change to these conflicts is not currently understood.

Fact Sheet↗

Vegetation projections for Wind Cave National Park with three future climate scenarios: Final report in completion of Task Agreement J8W07100052

Introduction The effects of climate change on the natural resources protected by Parks will likely be substantial, but geographically variable, due to local variation in climate trajectories and differences among ecosystems in their vulnerability to climate change. The projections of general circulation models (GCMs) indicate the possible magnitude and direction of future climate change for a region, but the utility of these projections for more local scales, those of individual National Park Service (NPS) units, are more uncertain because the coarse-scale GCMs lack much of the topographic detail that alters local climates. In addition, complex, interacting effects of temperature, precipitation, atmospheric CO 2 concentrations, fire, and herbivores on the vegetation that is the foundational natural resource of many NPS units present challenges in assessing the effects of projected future climates on plant and animal assemblages managed by the NPS. In spring 2009, Wind Cave National Park (WICA) served as a case study in a workshop assessing the use of scenario planning as a tool for park management planning in the face of rapidly changing climate. One outcome of the workshop was the recognized need for quantitative models to better understand the range of possible vegetation changes under different future climates and management decisions. This report addresses this need; it describes our adaptation of a dynamic global vegetation model (DGVM) to WICA vegetation and the resulting projections of future vegetation under three future climate scenarios and 11 management scenarios determined by Park natural resource managers. Wind Cave National Park lies along a narrow transition zone between the ponderosa pine (Pinus ponderosa) forests of the Black Hills and the mixed grass prairie that once extended with few interruptions over the lower, gentler terrain, subject to warmer, drier climate to the east and south of the Park. The location and character of this transition is strongly influenced by fire frequency and intensity (Brown and Sieg 1999). Furthermore, the mixed grass prairie occupies a broader transition zone between eastern tallgrass prairie and the shortgrass prairie of the western Great Plains. The dominance of species characteristic of these two prairie types varies with soil moisture availability, evaporative demand, and recent grazing history (Cogan et al. 1999). In addition, Wind Cave lies near the midpoint of a long gradient of C 3 (cool season) grass dominance to the north and C 4 (warm season) grass dominance to the south. The ecotonal position of WICA may make it particularly sensitive to climate change. For example, small changes in fire frequency and/or intensity and the vigor of trees vs. grass could dramatically shift the proportions of these two lifeforms. The Park hydrology is also sensitive to changes in the balance between infiltration of precipitation and evapotranspiration, as on average, only a small fraction of annual precipitation reaches the deeper soil layers that feed permanent streamflow. The resources at risk at Wind Cave NP include the Cave itself, as well as small backcountry caves, a genetically important bison herd, and other prairie species including the black-tailed prairie dog and endangered black-footed ferrets. All of these resources will be directly affected by climate change impacts on vegetation and hydrology. Natural resource management challenges at WICA are substantial, diverse, and intertwined. Aboveground, the park has been recognized as exemplary for its high quality vegetation (Marriot et al. 1999), though the park is relatively small for the diversity of vegetation types and species that it supports. Even without a changing climate, maintaining the integrity of the plant communities is complicated by the park’s legislated responsibility to maintain viable populations of bison, elk and pronghorn. In addition, the federally endangered black-footed ferret was recently re-introduced to the park. This species requires large extents of prairie dog towns for prey and habitat. Prairie dogs impact vegetation by constant clipping, grazing and soil disturbance, thereby affecting plant composition and productivity. Moreover, naturally high interannual climate variability and the strong influence of precipitation on grass productivity in this region combine to yield high interannual variability in the amount of forage available for the wildlife that the park is tasked to maintain. Finally, fire, which is now primarily controlled by WICA and NPS Northern Great Plains fire management programs, is intertwined with all other natural resource issues at WICA, as it can impact prairie dog colony and forest expansion, ungulate foraging behavior, invasive plant species, and hydrological processes. Although not capable of capturing all of these complexities, dynamic vegetation models do provide a means for quantitatively projecting vegetation futures in future climates under plausible fire and grazing regimes. Our work uses the DGVM MC1 to simulate the effects of future climate projections and management practices on the vegetation of WICA. MC1 is designed to project potential vegetation as influenced by natural processes and hence is appropriate for national parks, where conservation of native biota and ecosystems is of great importance. Since the initial application of MC1 to a small portion of WICA (Bachelet et al. 2000), the model has been altered to improve model performance with the inclusion of dynamic fire. Applying this improved version to WICA required substantial recalibration, during which we have made a number of improvements to MC1 that will be incorporated as permanent changes. In this report we document these changes and our calibration procedure following a brief overview of the model. We compare the projections of current vegetation to the current state of the park and present projections of vegetation dynamics under future climates downscaled from three GCMs selected to represent the existing range in available GCM projections. In doing so, we examine the consequences of different management options regarding fire and grazing, major aspects of biotic management at Wind Cave.

South Dakota↗

Upper thermal tolerance and heat shock protein response of juvenile American shad (Alosa sapidissima)

Juvenile American shad ( Alosa sapidissima ) experience a wide range of temperatures in rivers before migrating to the ocean. Temperatures in these freshwater environments can vary greatly spatially, seasonally, year-to-year, and can be impacted by anthropogenic factors such as power plant discharge or climate change. Currently, there is uncertainty concerning juvenile American shad thermal tolerance due to a lack of a well-controlled study. Here, we report results of laboratory experiments to establish the upper thermal tolerance and heat shock protein response of juvenile American shad exposed to gradually increasing temperatures. Upper thermal tolerance was determined to be 35 °C (median; range = 34–36 °C) when fish were acclimated to 25 °C and temperatures were raised 1 °C day −1 . Heat shock protein response was indicated by changes in branchial mRNA abundance of the inducible heat shock protein 90 alpha ( hsp90α ), which was significantly elevated (more than 5-fold increase) at 30 °C, and highest in fish that had reached their upper thermal maximum between 34 and 36 °C. Our findings indicate a higher upper thermal tolerance than previously reported for juvenile American shad, and an onset temperature of hsp90α induction at 30 °C, a temperature juvenile American shad commonly experience during summer months.

Estuaries and Coasts↗

Bacterial genomics reveal the complex epidemiology of an emerging pathogen in arctic and boreal ungulates

Northern ecosystems are currently experiencing unprecedented ecological change, largely driven by a rapidly changing climate. Pathogen range expansion, and emergence and altered patterns of infectious disease, are increasingly reported in wildlife at high latitudes. Understanding the causes and consequences of shifting pathogen diversity and host-pathogen interactions in these ecosystems is important for wildlife conservation, and for indigenous populations that depend on wildlife. Among the key questions are whether disease events are associated with endemic or recently introduced pathogens, and whether emerging strains are spreading throughout the region. In this study, we used a phylogenomic approach to address these questions of pathogen endemicity and spread for Erysipelothrix rhusiopathiae , an opportunistic multi-host bacterial pathogen associated with recent mortalities in arctic and boreal ungulate populations in North America. We isolated E. rhusiopathiae from carcasses associated with large-scale die-offs of muskoxen in the Canadian Arctic Archipelago, and from contemporaneous mortality events and/or population declines among muskoxen in northwestern Alaska and caribou and moose in western Canada. Bacterial genomic diversity differed markedly among these locations; minimal divergence was present among isolates from muskoxen in the Canadian Arctic, while in caribou and moose populations, strains from highly divergent clades were isolated from the same location, or even from within a single carcass. These results indicate that mortalities among northern ungulates are not associated with a single emerging strain of E. rhusiopathiae , and that alternate hypotheses need to be explored. Our study illustrates the value and limitations of bacterial genomic data for discriminating between ecological hypotheses of disease emergence, and highlights the importance of studying emerging pathogens within the broader context of environmental and host factors.

Frontiers in Microbiology↗

Preliminary assessment of climatic change during Late Wisconsin time, southern Great Basin and vicinity, Arizona, California, and Nevada

Nine plant macrofossil assemblages from the Eleana Range-2 packrat (Neotoma sp.) midden span 6,500 radiocarbon years and record local vegetational changes in the southern Great Basin of Nevada during the last one-half of the Late Wisconsin glacial age. Climatic reconstructions were developed to account for these changes. During the late full glacial episode (17,000 to 15,000 radiocarbon years before the present), winter precipitation was about 70% greater than present winter precipitation, and summer rainfall was minimal. Average annual precipitation probably exceeded present annual precipitation by less than 40%. Annual temperatures were about 6 to 7 C lower than the present average, and evidence exists for winter temperatures much lower than those of the present. A major warming trend occurred between about 16,000 and 12,000 radiocarbon years before present. By the latest Wisconsin (12 ,000 to 10,000 radiocarbon years before present), annual temperatures were within 2 C of temperatures of the present. During the latest Wisconsin, precipitation was greater during the winter, relative to the present. The climate of this pluvial event was much different from that of the preceding full glacial episode and is consistent with current models of astronomically induced climatic changes. (USGS)

Water-Resources Investigations Report↗

A review of the effects of climate change on visitor use in US public lands and waters

Climate change is affecting recreational visitor use in U.S. public lands and waters, causing changes to visitation levels, timing of trips, activity participation, and visitor safety. This report reviews the literature on how climate change is influencing visitor use in the United States and how visitor use may be affected in the future. Our goal is to provide the current state of the literature for managers of public lands and waters and provide foundational information for the development of a climate change vulnerability assessment methodology for visitor use within the National Park Service (that may be applicable to other federal lands and waters). Specifically, we investigate how seven different climate change factors may affect visitor use on public lands and waters. These factors consist of increasing temperatures; flooding, drought, and increased variability of precipitation; decreasing snowpack and earlier spring runoff; wildfires, smoke, and air quality; coastal hazards: hurricanes and sea level rise; harmful algal blooms (HABs); and zoonotic and vector-borne disease. The current research indicates that these factors are already affecting visitors to public lands and waters and continued effects in the future are likely as the climate warms. Additionally, we summarize existing research on how visitors to U.S. public lands and waters are adapting to climate change. Throughout the review, we note where there are substantial gaps in the literature and more research would help managers respond to the effects of climate change on visitor use.

Science Report↗

Reconnaissance hydrology of Portage Glacier basin, Alaska

Early reports of conditions in Portage Pass, Alaska, provide evidence that Portage Glacier was formerly larger and thicker. Past conditions, recent history, current retreat, and possible future changes are summarized from an analysis of reports, photographs of the glacier (1939, 1950, and annually since about 1960), and data on snow and ice balance and bathymetry (1972). Between 1900 and 1972, the glacier terminus retreated 3.4 kilometers, and the lower part of the glacier thinned 200 meters. Climatic change controlled the retreat until about 1930; since then deep water at the terminus has influenced the calving retreat. The calving rate and present terminus position cannot be sustained by current climatic conditions and rate of snow accumulation. Thus the glacier will continue to recede until the terminus stabilizes in shallower water, probably about 1.5 kilometers upvalley from the present terminus and in about year 2020, assuming no change in present climatic conditions and calving rate. Possible small climatic changes could cause a shift in the point at which annual snow accumulation equals annual ablation (500 meters) and a corresponding change in terminus behavior. Potential natural hazards include avalanches, outburst floods from ice-dammed lakes, and unstable icebergs.

Alaska↗

Catalog of microscopic organisms of the Everglades, Part 1—The cyanobacteria

The microscopic organisms of the Everglades include numerous prokaryotic organisms, including the eubacteria, such as the cyanobacteria and non-photosynthetic bacteria, as well as several eukaryotic algae and protozoa that form the base of the food web. This report is part 1 in a series of reports that describe microscopic organisms encountered during the examination of several hundred samples collected in the southern Everglades. Part 1 describes the cyanobacteria and includes a suite of images and the most current taxonomic treatment of each taxon. The majority of the images are of live organisms, allowing their true color to be represented. A number of potential new species are illustrated; however, corroborating evidence from a genetic analysis of the morphological characteristics is needed to confirm these designations as new species. Part 1 also includes images of eubacteria that resemble cyanobacteria. Additional parts of the report on microscopic organisms of the Everglades are currently underway, such as the green algae and diatoms. The report also serves as the basis for a taxonomic image database that will provide a digital record of the Everglades microscopic flora and fauna. It is anticipated that these images will facilitate current and future ecological studies on the Everglades, such as understanding food-web dynamics, sediment formation and accumulation, the effects of nutrients and flow, and climate change.

Florida↗

The landscape of soil carbon data: Emerging questions, synergies and databases

Soil carbon has been measured for over a century in applications ranging from understanding biogeochemical processes in natural ecosystems to quantifying the productivity and health of managed systems. Consolidating diverse soil carbon datasets is increasingly important to maximize their value, particularly with growing anthropogenic and climate change pressures. In this progress report, we describe recent advances in soil carbon data led by the International Soil Carbon Network and other networks. We highlight priority areas of research requiring soil carbon data, including (a) quantifying boreal, arctic and wetland carbon stocks, (b) understanding the timescales of soil carbon persistence using radiocarbon and chronosequence studies, (c) synthesizing long-term and experimental data to inform carbon stock vulnerability to global change, (d) quantifying root influences on soil carbon and (e) identifying gaps in model–data integration. We also describe the landscape of soil datasets currently available, highlighting their strengths, weaknesses and synergies. Now more than ever, integrated soil data are needed to inform climate mitigation, land management and agricultural practices. This report will aid new data users in navigating various soil databases and encourage scientists to make their measurements publicly available and to join forces to find soil-related solutions.

Progress in Physical Geography: Earth and Environm↗

Final report for sea-level rise response modeling for San Francisco Bay estuary tidal marshes

The International Panel on Climate Change has identified coastal ecosystems as areas that will be disproportionally affected by climate change. Current sea-level rise projections range widely with 0.57 to 1.9 meters increase in mea sea level by 2100. The expected accelerated rate of sea-level rise through the 21 st century will put many coastal ecosystems at risk, especially those in topographically low-gradient areas. We assessed marsh accretion and plant community state changes through 2100 at 12 tidal salt marshes around San Francisco Bay estuary with a sea-level rise response model. Detailed ground elevation, vegetation, and water level data were collected at all sites between 2008 and 2011 and used as model inputs. Sediment cores (taken by Callaway and others, 2012) at four sites around San Francisco Bay estuary were used to estimate accretion rates. A modification of the Callaway and others (1996) model, the Wetland Accretion Rate Model for Ecosystem Resilience (WARMER), was utilized to run sea-level rise response models for all sites. With a mean sea level rise of 1.24 m by 2100, WARMER projected that the vast majority, 95.8 percent (1,942 hectares), of marsh area in our study will lose marsh plant communities by 2100 and to transition to a relative elevation range consistent with mudflat habitat. Three marshes were projected to maintain marsh vegetation to 2100, but they only composed 4.2 percent (85 hectares) of the total marsh area surveyed.

California↗

Shifting currents: Progress, setbacks, and shifts in policy and practice

The Wisconsin Academy’s initial Waters of Wisconsin project (WOW I) facilitated a statewide conversation between 2000 and 2003 around one main question: How can we ensure healthy aquatic ecosystems and clean, abundant water supplies for tomorrow’s Wisconsin? Robust participation in this conversation underscored the important role citizens have in the stewardship of our waters, and we found enthusiastic support for farsighted policies—based on sound science—to manage our water legacy. Overall, we found that Wisconsinites cherish water and see our waters as essential to our way of life in Wisconsin. Nationally, our state ranks 25th in land area but has the fourth-highest area covered by water. Wisconsin is 20th in population but is second only to Florida in the number of fishing licenses sold each year. Clean water supports billions of dollars’ worth of economic activity through tourism, agriculture, and industry. From the Northwoods cabin to the Port of Milwaukee to the Wisconsin Dells, water shapes our state’s identity. Our tradition of safeguarding Wisconsin’s waters is grounded in values such as responsibility to family and future generations, respect for land and wildlife, protecting public health and safety, and caring for water as a common good, as articulated in the state’s Public Trust Doctrine (see page 9). These deeply held values have also shaped a conservation ethic, and its legacy has served many generations who depend upon and enjoy the waters of the state. Through WOW I, we identified the need to overcome the institutional and disciplinary separation of science, policy, and management protocols through a more integrated approach to water management. WOW also affirmed that the Wisconsin Department of Natural Resources (DNR) and other public agencies play a critical role in sound scientific application, citizen participation, and the practical implementation of policy while balancing public and private interests toward the goal of a clean water future. More than a decade has passed since our first statewide WOW conversation and the report that captured recommendations from its participants: Waters of Wisconsin: The Future of Our Aquatic Ecosystems and Resources. Drawing from a diverse and growing set of stakeholders from across the state, the Wisconsin Academy initiated a new conversation in 2012 (known as WOW II) to assess progress in regard to our 2003 recommendations. We also sought to review the status of waters in Wisconsin today. The result of this renewed conversation is Shifting Currents: Progress, Setbacks, and Shifts in Policy and Practice. The new report assesses progress in brief, and explores in greater depth the continuing and emerging challenges to water quality, supply, and aquatic ecosystems in Wisconsin. In this report, we first review the context and frameworks for public decision-making about water and then examine some of the root causes—or “drivers”—and ecological stressors that underlie many of the symptoms we see in the form of pollution or ecosystem degradation in Wisconsin. This is followed by a summary of current water issues, many of which had been identified in the 2003 report and remain relevant today. We examine progress since 2003 but also setbacks, and discuss issues that we are likely to continue to face in the coming decades, including controlling agricultural runoff, mitigating climate change and grappling with its effects on the state’s waters, protecting groundwater from bacterial contamination and other pollutants, and preventing groundwater depletion. We also attempt to anticipate issues on the horizon. We offer a deeper look at some particular challenges, such as phosphorus pollution and groundwater contamination. We then consider the current decision-making framework and how it is shaping our capacity to respond to water challenges in Wisconsin. Finally, we offer recommendations and identify opportunities to safeguard Wisconsin’s waters in the decades ahead. From its inception, the Wisconsin Academy’s Waters of Wisconsin Initiative has brought together a diverse community of experts from across the state and from varied fields and areas of interest, to address challenges and seize opportunities related to our precious waters. We have done so as a matter of both principle and practical reality: the state of our waters reflects the ways we interact not only with them, but also with one another and our institutions. The WOW Initiative has aimed to provide guidance for Wisconsin citizens in sustaining the health of our aquatic ecosystems and the resilience of our water supplies over the long term.

Report↗

An introduction to current climate projections and their use in climate impacts research

Using climate projections to evaluate future climate impacts and their associated risks requires a background knowledge of the nature of climate change, use of climate models to develop future projections, and knowledge of how to address climate scenario uncertainty. This chapter provides an overview of climate and climate change, some of the foundational climate science that underlies current climate change assessments, and a brief introduction to climate models and climate scenario uncertainty. Global projections of temperature and precipitation changes from the recent Intergovernmental Panel on Climate Change (IPCC) Sixth Assessment Report (AR6) and a brief comparison to the prior assessment (AR5) are provided. The main sources of uncertainty in these projections include climate variability, climate model differences and treatment of scientific knowledge gaps, and greenhouse gas (GHG) emissions. When projections are downscaled to local resolution, downscaling is an additional source of uncertainty. These uncertainties can be incorporated in assessments of climate impacts by choosing a range of scenarios that directly address the sources of uncertainty. Evaluating the likelihood of a given climate impact on animal health or management strategies requires consideration of the main sources of climate projection uncertainties. Adaptation requires consideration of global-to-regional contexts of climate changes and impacts, but also adaptive capacity.

Book chapter↗