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USGS2005

Biology and invasive species in the western U.S

The diversity of environments that characterizes the West is responsible for the region's rich biological heritage. This ecological diversity also means that opportunities for invasive species are many, varied, and complex. Island ecosystems are notoriously vulnerable to invaders as demonstrated in Hawaii and West Coast offshore islands. Aquatic invaders impose high economic and environmental costs in systems as varied as San Francisco Bay and desert springs in the Great Basin. Although the West's arid and montane ecosystems may seem resistant to plant and animal invaders, we now know that ex-otic species have altered physical processes related to fire and hydrology in a manner favoring further expansion and persis-tence of invaders. Natural resource managers value analytical, mapping, and genetics tools developed by USGS scientists to monitor invasive species and help conserve biological systems. USGS biologists conduct research to assist land and water managers' efforts to control invasive species and restore natural systems. Throughout the West, the USGS carries out studies for early detection and rapid assessment of invaders. The following are some examples of how the USGS is making a difference in the western United States.

Fact Sheet↗

USGS2022

Analyzing the effects of land cover change on the water balance for case study watersheds in different forested ecosystems in the USA

We analyzed impacts of interannual disturbance on the water balance of watersheds in different forested ecosystem case studies across the United States from 1985 to 2016 using a remotely sensed long-term land cover monitoring record (U.S. Geological Survey Land Change Monitoring, Assessment, and Projection (LCMAP) Collection 1.0 Science products), gridded precipitation and evaporation data, and streamgaging data using paired watersheds (high and low disturbance). LCMAP products were used to quantify the timing and degree of interannual disturbance and to gain a better understanding of how land cover change affects the water balance of disturbed watersheds. In this paper, we present how LCMAP science products can be used to improve knowledge for hydrologic modeling, climate research, and forest management. Anthropogenic influences (e.g., dams and irrigation diversions) often minimize the impacts of land cover change on water balance dynamics when compared to interannual fluctuations of hydroclimatic events (e.g., drought and flooding). Our findings show that each watershed exhibits a complex suite of influences involving climate variables and other factors that affect each of their water balances differently when land cover change occurs. In this study, forests within arid to semi-arid climates experience greater water balance effects from land cover change than watersheds where water is less limited.

Land↗

USGS1999

An assessment the effects of human-caused air pollution on resources within the interior Columbia River basin

An assessment of existing and potential impacts to vegetation, aquatics, and visibility within the Columbia River basin due to air pollution was conducted as part of the Interior Columbia Basin Ecosystem Management Project. This assessment examined the current situation and potential trends due to pollutants such as ammonium, nitrogen oxides, sulfur oxides, particulates, carbon, and ozone. Ecosystems and resources at risk are identified, including certain forests, lichens, cryptogamic crusts, high elevation lakes and streams, arid lands, and class I areas. Current monitoring data are summarized and air pollution sources identified. The assessment also includes a summary of data gaps and suggestions for future research and monitoring related to air pollution and its effects on resources in the interior Columbia River basin.

General Technical Report↗

USGS2026

Identifying headwater streams across the conterminous United States

Headwater streams play critical roles in hydrologic and biogeochemical processes and functions, yet their spatial distribution and land cover context remain poorly understood at continental scales, and no dedicated geospatial dataset exists. Building from a high-resolution conterminous United States (CONUS) hydrography network dataset, we quantified the spatial extent, density, and upstream catchment characteristics of headwater stream segments across the CONUS. We identified approximately 8.4 million kilometers of headwater streams, finding that 77% of the total stream network consists of headwaters, nearly double the total length represented in prior estimates. Stream density varied fivefold across regions, from < 1 km·km −2 in arid basins to > 5 km·km −2 in humid, forested areas. Over 73% of the CONUS landmass drains from headwater streams. The majority of headwater stream length occurred in forested and cultivated catchments across the CONUS, while substantial regional differences were evident for headwater stream distribution in other land cover classes (for example, wetlands, urban areas, shrublands, and herbaceous-dominated catchments). The dedicated and novel geospatial dataset, HELiOS (HEadwater streams and Low-Order Systems) is introduced for management and research use. The HELiOS dataset provides the first continental-scale, high-resolution characterization of headwater streams, offering new insights and opportunities for hydrologic modeling, ecological assessments, and environmental policy.

conterminous United States↗

USGS2000

Preface paper to the Semi-Arid Land-Surface-Atmosphere (SALSA) Program special issue

The Semi-Arid Land-Surface-Atmosphere Program (SALSA) is a multi-agency, multi-national research effort that seeks to evaluate the consequences of natural and human-induced environmental change in semi-arid regions. The ultimate goal of SALSA is to advance scientific understanding of the semi-arid portion of the hydrosphere-biosphere interface in order to provide reliable information for environmental decision making. SALSA approaches this goal through a program of long-term, integrated observations, process research, modeling, assessment, and information management that is sustained by cooperation among scientists and information users. In this preface to the SALSA special issue, general program background information and the critical nature of semi-arid regions is presented. A brief description of the Upper San Pedro River Basin, the initial location for focused SALSA research follows. Several overarching research objectives under which much of the interdisciplinary research contained in the special issue was undertaken are discussed. Principal methods, primary research sites and data collection used by numerous investigators during 1997-1999 are then presented. Scientists from about 20 US, five European (four French and one Dutch), and three Mexican agencies and institutions have collaborated closely to make the research leading to this special issue a reality. The SALSA Program has served as a model of interagency cooperation by breaking new ground in the approach to large scale interdisciplinary science with relatively limited resources.

Conference Paper↗

USGS1998

Hydrogeologic studies at the USGS Amargosa Desert Research Site

In 1976, the U.S. Geological Survey (USGS) began studies of unsaturated-zone hydrology in the Amargosa Desert in support of the USGS Low-Level Radioactive Waste Program. In 1983, agreements with the Bureau of Land Management and the State of Nevada established two field study areas: a 16-ha area adjacent to a waste-burial facility 17 km south of Beatty and a 0.1-ha area about 3 km farther south (fig. 1A). The study areas are collectively known as the Amargosa Desert Research Site (ADRS). Investigations at the ADRS have provided long-term benchmark information about hydraulic characteristics and soil-water movement for undisturbed conditions and for simulated waste-site conditions in arid environments. In 1995, as a result of unexpectedly finding high concentrations of tritium and carbon-14 in the unsaturated zone beneath the ADRS, the scope of research was broadened to include the study of processes affecting radionuclide transport. The ADRS was incorporated into the USGS Toxic Substances Hydrology Program in 1997. Research at the site is a multidisciplinary, collaborative effort that involves scientists from the USGS, universities, research institutes, and national laboratories. The overall objective for research at the site is to improve understanding of and methods for characterizing mechanisms that control subsurface migration and fate of contaminants in arid environments.

Nevada↗

USGS2021

PS3: The Pheno-Synthesis software suite for integration and analysis of multi-scale, multi-platform phenological data

Phenology is the study of recurring plant and animal life-cycle stages which can be observed across spatial and temporal scales that span orders of magnitude (e.g., organisms to landscapes). The variety of scales at which phenological processes operate is reflected in the range of methods for collecting phenologically relevant data, and the programs focused on these collections. Consideration of the scale at which phenological observations are made, and the platform used for observation, is critical for the interpretation of phenological data and the application of these data to both research questions and land management objectives. However, there is currently little capacity to facilitate access, integration and analysis of cross-scale, multi-platform phenological data. This paper reports on a new suite of software and analysis tools – the “Pheno-Synthesis Software Suite,” or PS3 – to facilitate integration and analysis of phenological and ancillary data, enabling investigation and interpretation of phenological processes at scales ranging from organisms to landscapes and from days to decades. We use PS3 to investigate phenological processes in a semi-aride, mixed shrub-grass ecosystem, and find that the apparent importance of seasonal precipitation to vegetation activity (i.e., “greenness”) is affected by the scale and platform of observation. We end by describing potential applications of PS3 to phenological modeling and forecasting, understanding patterns and drivers of phenological activity in real-world ecosystems, and supporting agricultural and natural resource management and decision-making.

Ecological Informatics↗

USGS2008

The Colorado Plateau III: integrating research and resources management for effective conservation

Roughly centered on the Four Corners region of the southwestern United States, the Colorado Plateau covers an area of 130,000 square miles. The relatively high semi-arid province boasts nine national parks, sixteen national monuments, many state parks, and dozens of wilderness areas. With the highest concentration of parklands in North America and unique geological and ecological features, the area is of particular interest to researchers. Derived from the Eighth Biennial Conference of Research on the Colorado Plateau, this third volume in a series of research on the Colorado Plateau expands upon the previous two books. This volume focuses on the integration of science into resource management issues, summarizes what criteria make a successful collaborative effort, outlines land management concerns about drought, provides summaries of current biological, sociological, and archaeological research, and highlights current environmental issues in the Four Corner States of Arizona, New Mexico, Colorado, and Utah. With broad coverage that touches on topics as diverse as historical aspects of pronghorn antelope movement patterns through calculating watershed prescriptions to the role of wind-blown sand in preserving archaeological sites on the Colorado River, this volume stands as a compendium of cuttingedge management-oriented research on the Colorado Plateau. The book also introduces, for the first time, tools that can be used to assist with collaboration efforts among landowners and managers who wish to work together toward preserving resources on the Colorado Plateau and offers a wealth of insights into land management questions for many readers, especially people interested in the natural history, biology, anthropology, wildlife, and cultural management issues of the region.

Utah;Arizona;Colorado;New Mexico↗

USGS1999

Factors controlling the establishment of Fremont cottonwood seedlings on the Upper Green River, USA

Declines in cottonwood ( Populus spp.) recruitment along alluvial reaches of large rivers in arid regions of the western United States have been attributed to modified flow regimes, lack of suitable substrate, insufficient seed rain, and increased interspecific competition. We evaluated whether and how these factors were operating during 1993–1996 to influence demographics of Fremont cottonwood ( P. deltoides Marshall subsp. wislizenii (Watson) Eckenwalder) along reaches of the Green and Yampa Rivers near their confluence in northwestern Colorado. We examined seedling establishment, defined as survival through three growing seasons, at three alluvial reaches that differed primarily in the level of flow regulation: a site on the unregulated Yampa, an upper Green River site regulated by Flaming Gorge Dam, and a lower Green River site below the Green–Yampa confluence. Seed rain was abundant in all sites, and led to large numbers of germinants (first-year seedlings) appearing each year at all sites. The regulated flow in the upper Green River reach restricted germination to islands and cut banks that were later inundated or eroded; no seedlings survived there. Mortality at the lower Green River site was due largely to desiccation or substrate erosion; 23% of 1993 germinants survived their first growing season, but at most 2% survived through their second. At the Yampa River site, germinants appeared on vegetated and unvegetated surfaces up to 2.5 m above base flow stage, but survived to autumn only on bare surfaces at least 1.25 m above base flow stage, and where at least 10 of the upper 40 cm of the alluvium was fine-textured. Our studies of rooting depths and the stable isotopic composition of xylem water showed that seedlings in the most favorable locations for establishment at the Yampa site do not become phreatophytic until their third or fourth growing season. Further, the results of experimental field studies examining effects of shade and competition supported the hypothesis that insufficient soil moisture, possibly in combination with insufficient light, restricts establishment to unvegetated sites. Collectively, the demographic and experimental studies suggest that, in arid regions, soil water availability is at least as important as light level in limiting establishment of Fremont cottonwood seedlings. We hypothesize that in cases where arid land rivers experience large spring stage changes, recruitment is further constrained within bare areas to those sites that contain sufficient fine-textured alluvium, saturated during the spring flood, to provide the flood-derived soil moisture normally necessary for late-summer seedling survival.

Upper Green River↗

USGS2016

U.S. Geological Survey science for the Wyoming Landscape Conservation Initiative—2015 annual report

This is the eighth annual report highlighting U.S. Geological Survey (USGS) science and decision-support activities conducted for the Wyoming Landscape Conservation Initiative (WLCI). The activities address specific management needs identified by WLCI partner agencies. In 2015, USGS scientists continued 24 WLCI projects in 5 categories: (1) acquiring and analyzing resource-condition data to form a foundation for understanding and monitoring landscape conditions and projecting changes; (2) using new technologies to improve the scope and accuracy of landscape-scale monitoring and assessments, and applying them to monitor indicators of ecosystem conditions and the effectiveness of on-the-ground habitat projects; (3) conducting research to elucidate the mechanisms that drive wildlife and habitat responses to changing land uses; (4) managing and making accessible the large number of databases, maps, and other products being developed; and (5) coordinating efforts among WLCI partners, helping them to use USGS-developed decision-support tools, and integrating WLCI outcomes with future habitat enhancement and research projects. Of the 24 projects, 21 were ongoing, including those that entered new phases or more in-depth lines of inquiry, 2 were new, and 1 was completed. A highlight of 2015 was the WLCI science conference sponsored by the USGS, Bureau of Land Management, and National Park Service in coordination with the Wyoming chapter of The Wildlife Society. Of 260 participants, 41 were USGS professionals representing 13 USGS science centers, field offices, and Cooperative Wildlife Research Units. Major themes of USGS presentations included using new technologies for developing more efficient research protocols for modeling and monitoring natural resources, researching effects of energy development and other land uses on wildlife species and habitats of concern, and modeling species distributions, population trends, habitat use, and effects of land-use changes. There was also a special session on the effectiveness of Wyoming’s Sage-Grouse Executive Order. Combined, USGS presentations provided WLCI partners with a wealth of information and conservation tools. The project completed in 2015 yielded an index of important agricultural lands in the WLCI region. The index improves upon existing measures of agricultural productivity and provides planners and managers with additional values to consider when making decisions about land use and conservation actions. The two new projects include an analysis of satellite imagery to quantify sagebrush productivity and mortality, and an evaluation of how groundwater and small streams interact in the upper Green River Basin. Initiated in response to concern among WLCI partners that large areas of sagebrush appear to have died recently, the sagebrush study objectives are to assess effects of these mortality events on overall sagebrush ecosystem productivity, evaluate the feasibility of using satellite imagery to detect patterns in sagebrush mortality over time, and identify factors driving these mortality events. The groundwater-streamflow interaction study is being conducted by hydrologists and fish ecologists to better understand how groundwater-streamflow interactions are affected by energy-resource development and how native fish communities are affected by these factors. Expected outcomes of both new projects will provide WLCI partners with additional information and decision-support tools. Highlights of ongoing science foundation activities included simulations of nine alternative build-out scenarios for oil and gas development and an associated online fact sheet that explains how the simulations were conducted, with an applied example for the Atlantic Rim. Also completed in 2015 was an update of the USGS online inventory of mineral resources data, and publication of a USGS uranium resource survey for the WLCI region. Combined, the outcomes of this work provide decisionmakers and managers with important baseline information for existing and (or) future planning and monitoring efforts. Terrestrial monitoring activities in 2015 emphasized the use of satellite data in combination with other technologies and field data to monitor, assess, and (or) forecast distribution patterns and (or) trends in sagebrush ecosystems, seasonal and migration stopover habitats used by mule deer and elk, and semi-arid aspen woodlands. Several professional papers detailing new monitoring models and results have been published. Combined, this and related work will help managers understand distribution patterns and trends among priority habitats, identify areas in need of restoration or conservation, and monitor the effectiveness of habitat-management actions. Aquatic monitoring activities entailed not only the new groundwater-streamflow interaction study already mentioned, but also continued monitoring with streamgages paired with nearby wells in the Green River Basin to assess groundwater effects on streamflow and surface water temperatures. A map that portrays groundwater levels and general direction of flow in the Green River Basin was published as well . Overall, outcomes of USGS hydrological research and monitoring will inform WLCI partners about water resources in the WLCI region and help to explain fish-community responses to energy-resource development. In 2015, USGS terrestrial wildlife ecologists continued to make crucial strides towards better understanding wildlife species responses to energy-resource development and other land-use changes. This body of research includes six taxa that require or heavily depend on sagebrush habitats: sage-grouse, pygmy rabbits, 3 songbird species, and mule deer. Native fish communities are also being evaluated. Approaches include modeling and mapping wildlife species distributions, abundances, and trends; using satellite and other technologies to track wildlife seasonal movements; conducting successive phases of research that build on the knowledge gained through prior phases to reveal the specific factors or thresholds that drive population- or individual-level responses to changes; and conducting population viability analyses. Additionally, wildlife habitat association models for pygmy rabbit and sage-grouse were combined with the oil and gas build-out scenarios to project species responses to alternative energy development scenarios. Outcomes of the wildlife response research are helping decisionmakers and managers identify specific factors that contribute to species population trends, the potential for spatial overlap between important wildlife habitats and proposed energy-resource development, locations of priority habitats for restoration and conservation, and more. Data and WLCI Web site management highlights of 2015 included not only ongoing software upgrades, but also an update of the datasets displayed in two of the online products developed for the WLCI effort: (1) a map of 15,532 oil and natural gas well pad scars and other features associated with oil and gas extraction, and (2) a map of oil and gas, oil shale, uranium, and solar energy production, both for southwestern Wyoming. In addition, a map viewer was developed for a previously published map of coal and wind production in relation to sage-grouse distribution and core management areas in southwestern Wyoming. Combined, these maps place valuable decision-support tools in the hands of WLCI partners. The USGS coordination efforts on behalf of the WLCI in 2015 included significant work on planning and executing the WLCI science conference. They also included ongoing efforts to support Local Project Development Teams and the WLCI Coordination Team (CT) with developing conservation priorities and strategies, identifying priority areas for future conservation actions, supporting the evaluation and ranking of conservation projects, and evaluating the ways in which proposed habitat projects relate to WLCI priorities. In 2015, the USGS also assisted the WLCI CT with updating the WLCI Conservation Action Plan.

Wyoming↗

USGS2021

Pervasive changes in stream intermittency across the United States

Non-perennial streams are widespread, critical to ecosystems and society, and the subject of ongoing policy debate. Prior large-scale research on stream intermittency has been based on long-term averages, generally using annually aggregated data to characterize a highly variable process. As a result, it is not well understood if, how, or why the hydrology of non-perennial streams is changing. Here, we investigate trends and drivers of three intermittency signatures that describe the duration, timing, and dry-down period of stream intermittency across the continental United States (CONUS). Half of gages exhibited a significant trend through time in at least one of the three intermittency signatures, and changes in no-flow duration were most pervasive (41% of gages). Changes in intermittency were substantial for many streams, and 7% of gages exhibited changes in annual no-flow duration exceeding 100 days during the study period. Distinct regional patterns of change were evident, with widespread drying in southern CONUS and wetting in northern CONUS. These patterns are correlated with changes in aridity, though drivers of spatiotemporal variability were diverse across the three intermittency signatures. While the no-flow timing and duration were strongly related to climate, dry-down period was most strongly related to watershed land use and physiography. Our results indicate that non-perennial conditions are increasing in prevalence over much of CONUS and binary classifications of 'perennial' and 'non-perennial' are not an accurate reflection of this change. Water management and policy should reflect the changing nature and diverse drivers of changing intermittency both today and in the future.

Environmental Research Letters↗

USGS2014

Ecoregions of Arizona (poster)

Ecoregions denote areas of general similarity in ecosystems and in the type, quality, and quantity of environmental resources; they are designed to serve as a spatial framework for the research, assessment, management, and monitoring of ecosystems and ecosystem components. By recognizing the spatial differences in the capacities and potentials of ecosystems, ecoregions stratify the environment by its probable response to disturbance. These general purpose regions are critical for structuring and implementing ecosystem management strategies across federal agencies, state agencies, and nongovernment organizations that are responsible for different types of resources within the same geographical areas. The Arizona ecoregion map was compiled at a scale of 1:250,000. It revises and subdivides an earlier national ecoregion map that was originally compiled at a smaller scale. The approach used to compile this map is based on the premise that ecological regions can be identified through the analysis of the spatial patterns and the composition of biotic and abiotic phenomena that affect or reflect differences in ecosystem quality and integrity. These phenomena include geology, physiography, vegetation, climate, soils, land use, wildlife, and hydrology. The relative importance of each characteristic varies from one ecological region to another regardless of the hierarchical level. A Roman numeral hierarchical scheme has been adopted for different levels of ecological regions. Level I is the coarsest level, dividing North America into 15 ecological regions. Level II divides the continent into 50 regions. At level III, the continental United States contains 105 ecoregions and the conterminous United States has 85 ecoregions. Level IV is a further subdivision of level III ecoregions. Arizona contains arid deserts and canyonlands, semiarid shrub- and grass-covered plains, woodland- and shrubland-covered hills, lava fields and volcanic plateaus, forested mountains, glaciated peaks, and river alluvial floodplains. Ecological diversity is remarkably high. There are 7 level III ecoregions and 52 level IV ecoregions in Arizona and many continue into ecologically similar parts of adjacent states. This poster is part of a collaborative project primarily between the U.S. Geological Survey (USGS), USEPA National Health and Environmental Effects Research Laboratory (Corvallis, Oregon), USEPA Region IX, U.S. Department of Agriculture (USDA)–Natural Resources Conservation Service (NRCS), The Nature Conservancy, and several Arizona state agencies. The project is associated with an interagency effort to develop a common national framework of ecological regions. Reaching that objective requires recognition of the differences in the conceptual approaches and mapping methodologies applied to develop the most common ecoregion-type frameworks, including those developed by the USDA–Forest Service, the USEPA, and the NRCS. As each of these frameworks is further refined, their differences are becoming less discernible. Collaborative ecoregion projects, such as this one in Arizona, are a step toward attaining consensus and consistency in ecoregion frameworks for the entire nation.

Arizona↗

USGS2024

Intra-urban variations in land surface phenology in a semi-arid environment

Urban vegetation is growing in importance as cities use 'green infrastructure' to mitigate the impacts of climate change, reduce extreme heat, and improve human health and comfort. However, due to the heterogeneity of city landscapes, urban vegetation experiences a diverse range of environmental conditions, potentially leading to differences in growing season timing and length within cities. Here, we investigate physical drivers of urban land surface phenology and timing within a semi-arid city (Denver, CO, USA) using four years (2018–2021) of remotely sensed vegetation indices, modelled air temperature, and land cover datasets. Within the metropolitan region study area, satellite-based vegetation index measurements indicate that growing season length is variable on sub-neighborhood spatial scales. This variability is largely due to differences in the timing of fall senescence, as opposed to early season growth. Areas with substantial fractions of irrigated land cover tend to remain greener for longer, while unirrigated and cooler areas are correlated with an earlier end to the growing season (up to ∼two months shorter). These findings complement those from non-arid cities where surface and air temperature are the dominant environmental control on phenological timing. Results here indicate the importance of soil moisture for phenology in semi-arid regions and suggest unique semi-arid urban growing season dynamics and temperature-vegetation feedbacks. These interactions have implications for water, heat, and vegetation management strategies to maximize ecosystem services in water-limited environments.

Colorado↗

USGS2017

Managing the livestock– Wildlife interface on rangelands

On rangelands the livestock–wildlife interface is mostly characterized by management actions aimed at controlling problems associated with competition, disease, and depredation. Wildlife communities (especially the large vertebrate species) are typically incompatible with agricultural development because the opportunity costs of wildlife conservation are unaffordable except in arid and semi-arid regions. Ecological factors including the provision of supplementary food and water for livestock, together with the persecution of large predators, result in livestock replacing wildlife at biomass densities far exceeding those of indigenous ungulates. Diseases are difficult to eradicate from free-ranging wildlife populations and so veterinary controls usually focus on separating commercial livestock herds from wildlife. Persecution of large carnivores due to their depredation of livestock has caused the virtual eradication of apex predators from most rangelands. However, recent research points to a broad range of solutions to reduce conflict at the livestock–wildlife interface. Conserving wildlife bolsters the adaptive capacity of a rangeland by providing stakeholders with options for dealing with environmental change. This is contingent upon local communities being empowered to benefit directly from their wildlife resources within a management framework that integrates land-use sectors at the landscape scale. As rangelands undergo irreversible changes caused by species invasions and climate forcings, the future perspective favors a proactive shift in attitude towards the livestock–wildlife interface, from problem control to asset management.

Book chapter↗

USGS2016

Effects of drought and fire on bird communities of the Kofa National Wildlife Refuge, Arizona

Executive Summary The U.S. Government created the Kofa National Wildlife Refuge (Kofa NWR) in 1939 in response to a citizen campaign to improve desert bighorn sheep populations in Arizona. The Kofa NWR is mountainous and remote, and its management by the U.S. Fish and Wildlife Service (FWS) keeps anthropogenic disturbance levels low. As such, Partners In Flight (PIF) listed the Kofa NWR as one of its Sonoran Desert portfolio sites in its Desert Bird Conservation Plan (McCreedy and others, 2009). Research presented here demonstrates that bird communities within a well-managed and remote Sonoran Desert portfolio site can nonetheless be negatively affected by human-caused stressors like fire and Brown-headed Cowbird ( Molothrus ater ) parasitism, which originate from beyond the Kofa NWR’s boundaries. In chapter 1, we examine how avian productivity can be influenced by timing of nest initiation. We demonstrate that (1) late nesting dates are correlated with low winter precipitation levels, a condition expected to occur in greater frequency in coming decades due to climate change (Seager and others, 2007) and that (2) late nesting dates result in decreased productivity, due to higher rates of nest depredation and, in the case of an open-cup nesting species, higher rates of brood parasitism experienced later in the breeding season. The brood parasite, the Brown-headed Cowbird, appears to forage and roost on agricultural lands north of the Kofa NWR’s boundary. From that location, they commute to the refuge to parasitize other passerine bird nests. Drought and subsequent loss in primary production have been correlated with decreased productivity for birds that breed in arid habitats (Preston and Rotenberry, 2006; Chase and others, 2005; Johnson and others, 2002; Morrison and Bolger, 2002; Brown and Li, 1996; Anderson and Anderson, 1973), yet drought’s standing as a threat to bird populations has been underestimated in recent regional conservation planning efforts (McCreedy and others, 2009; Latta and others, 1999). In chapter 2, we examine the effects of the King Valley fire on breeding and migrant birds within the Kofa NWR. This fire was caused by incendiary weapons testing within Yuma Proving Ground, south of the Kofa NWRboundary (Esque and others, 2013). We found large differences in spring migrant and breeding species abundance and richness between bird count stations within the 2005 King Valley fire zone and bird count stations immediately outside the fire perimeter. Habitat loss to fire, and the subsequent slow regeneration of a Sonoran Desert flora that is not well adapted to fire disturbance, is a recognized threat to bird populations (McCreedy and others, 2009; Latta, 1999), and of all Sonoran Desert wildlife, birds may be the most impacted by loss of perennial Sonoran Desert vegetation to fire (Esque and Schwalbe, 2002). We conclude that decreases in both breeding and migrant use of washes within burned areas will likely persist into the long term (>25 years) due to slow return rates of xeroriparian woodlands lost in the fire.

Arizona↗

USGS2004

Assessing land cover performance in Senegal, West Africa using 1-km integrated NDVI and local variance analysis

The researchers calculated seasonal integrated normalized difference vegetation index (NDVI) for each of 7 years using a time-series of 1-km data from the Advanced Very High Resolution Radiometer (AVHRR) (1992-93, 1995) and SPOT Vegetation (1998-2001) sensors. We used a local variance technique to identify each pixel as normal or either positively or negatively anomalous when compared to its surroundings. We then summarized the number of years that a given pixel was identified as an anomaly. The resulting anomaly maps were analysed using Landsat TM imagery and extensive ground knowledge to assess the results. This technique identified anomalies that can be linked to numerous anthropogenic impacts including agricultural and urban expansion, maintenance of protected areas and increased fallow. Local variance analysis is a reliable method for assessing vegetation degradation resulting from human pressures or increased land productivity from natural resource management practices. ?? 2004 Published by Elsevier Ltd.

Journal of Arid Environments↗

USGS2023

Implications of fire-induced evapotranspiration shifts for recharge-runoff generation and vegetation conversion in the western United States

Wildfire has been shown to increase, decrease, or have no detectable effect on actual evapotranspiration (ETa) fluxes in the western United States. Where disturbance-induced shifts are significant, source-water hydrology may be impacted as ETa constitutes the largest outgoing water flux in much of the arid West. We conducted pixel-scale analysis of 30-m ETa data and various meteorologic and landscape variables at 13 burn scars to understand how wildfire disturbance impacted hillslope-to-burn scar-scale hydrology and vegetation conversion. Significant fire-induced ETa reductions (between approximately −15 to −50%) were detected at nine burn scars through the tenth post-fire year, while ETa recovery rate varied substantially by ecoregion and pre-fire vegetation type. Along elevation gradients, both climate and land disturbance influenced the location of runoff/recharge generation zones, and more net water was generated from a snow-dominated burn scar in dry post-fire years than in wet pre-fire years. However, especially in arid locations where ETa is water-limited, compensatory ETa pathways may be more likely to dampen fire effects on total basin water yield where intact vegetation is located between the disturbance footprint and the basin outlet. Relationships between post-fire ETa shifts and early-successional vegetation conversion were also tracked. The majority of burn scars with significant fire-induced ETa reductions experienced conversion patterns typical of the western United States following stand-replacing disturbance, with forests converting to shrub/scrub and/or grassland/herbaceous cover through at least the end of the study period (eight to 15 years depending on date of the fire event). This could have important implications for high-elevation, snow-dominated watersheds – some of the most critical source water areas - as previous research indicates that wildfire activity is moving upslope and into vegetation communities that have not evolved to withstand fire. Finally, we show that much of the Colorado River Basin’s high-yield source water areas are vulnerable to the fire-induced ETa reductions and vegetation conversion observed herein. As such, water managers in the Colorado River Basin can anticipate changes in burn scar hydrology and snowpack mechanics following fire disturbance.

Journal of Hydrology X↗

USGS2010

Biological pathways of exposure and ecotoxicity values for uranium and associated radionuclides: Chapter D in Hydrological, geological, and biological site characterization of breccia pipe uranium deposits in Northern Arizona

This chapter compiles available chemical and radiation toxicity information for plants and animals from the scientific literature on naturally occurring uranium and associated radionuclides. Specifically, chemical and radiation hazards associated with radionuclides in the uranium decay series including uranium, thallium, thorium, bismuth, radium, radon, protactinium, polonium, actinium, and francium were the focus of the literature compilation. In addition, exposure pathways and a food web specific to the segregation areas were developed. Major biological exposure pathways considered were ingestion, inhalation, absorption, and bioaccumulation, and biota categories included microbes, invertebrates, plants, fishes, amphibians, reptiles, birds, and mammals. These data were developed for incorporation into a risk assessment to be conducted as part of an environmental impact statement for the Bureau of Land Management, which would identify representative plants and animals and their relative sensitivities to exposure of uranium and associated radionuclides. This chapter provides pertinent information to aid in the development of such an ecological risk assessment but does not estimate or derive guidance thresholds for radionuclides associated with uranium. Previous studies have not attempted to quantify the risks to biota caused directly by the chemical or radiation releases at uranium mining sites, although some information is available for uranium mill tailings and uranium mine closure activities. Research into the biological impacts of uranium exposure is strongly biased towards human health and exposure related to enriched or depleted uranium associated with the nuclear energy industry rather than naturally occurring uranium associated with uranium mining. Nevertheless, studies have reported that uranium and other radionuclides can affect the survival, growth, and reproduction of plants and animals. Exposure to chemical and radiation hazards is influenced by a plant’s or an animal’s life history and surrounding environment. Various species of plants, invertebrates, fishes, amphibians, reptiles, birds, and mammals found in the segregation areas that are considered species of concern by State and Federal agencies were included in the development of the site-specific food web. The utilization of subterranean habitats (burrows in uranium-rich areas, burrows in waste rock piles or reclaimed mining areas, mine tunnels) in the seasonally variable but consistently hot, arid environment is of particular concern in the segregation areas. Certain species of reptiles, amphibians, birds, and mammals in the segregation areas spend significant amounts of time in burrows where they can inhale or ingest uranium and other radionuclides through digging, eating, preening, and hibernating. Herbivores may also be exposed though the ingestion of radionuclides that have been aerially deposited on vegetation. Measured tissues concentrations of uranium and other radionuclides are not available for any species of concern in the segregation areas. The sensitivity of these animals to uranium exposure is unknown based on the existing scientific literature, and species-specific uranium presumptive effects levels were only available for two endangered fish species known to inhabit the segregation areas. Overall, the chemical toxicity data available for biological receptors of concern were limited, although chemical and radiation toxicity guidance values are available from several sources. However, caution should be used when directly applying these values to northern Arizona given the unique habitat and life history strategies of biological receptors in the segregation areas and the fact that some guidance values are based on models rather than empirical (laboratory or field) data. No chemical toxicity information based on empirical data is available for reptiles, birds, or wild mammals; therefore, the risks associated with uranium and other radionuclides are unknown for these biota.

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