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MODIS phenology image service ArcMap toolbox

Seasonal change is important to consider when managing conservation areas at landscape scales. The study of such patterns throughout the year is referred to as phenology. Recurring life-cycle events that are initiated and driven by environmental factors include animal migration and plant flowering. Phenological events capture public attention, such as fall color change in deciduous forests, the first flowering in spring, and for those with allergies, the start of the pollen season. These events can affect our daily lives, provide clues to help understand and manage ecosystems, and provide evidence of how climate variability can affect the natural cycle of plants and animals. Phenological observations can be gathered at a range of scales, from plots smaller than an acre to landscapes of hundreds to thousands of acres. Linking these observations to diverse disciplines such as evolutionary biology or climate sciences can help further research in species and ecosystem responses to climate change scenarios at appropriate scales. A cooperative study between the National Park Service (NPS), the U.S. Geological Survey (USGS), and the National Aeronautics and Space Administration (NASA) has been exploring how satellite information can be used to summarize phenological patterns observed at the park or landscape scale and how those summaries can be presented to both park managers and visitors. This study specifically addressed seasonal changes in plants, including the onset of growth, photosynthesis in the spring, and the senescence of deciduous vegetation in the fall. The primary objective of the work is to demonstrate that seasonality even in protected areas changes considerably across years. A major challenge is to decouple natural variability from possible trends—directional change that can lead to a permanent and radically different ecosystem state. Trends can be either a gradual degradation of the landscape (often from external influences) or steady improvement (by implementing long-term conservation plans). In either case, it is important to first grasp the magnitude of natural variation so that it is not confused with actual trends. This work used existing and freely available remote sensing data, specifically the NASA-funded 250-meter (m) spatial resolution land-surface phenology product for North America. This product is calculated from an annual record of vegetation health observed by NASA’s Moderate Resolution Imaging Spectroradiometer (MODIS) instrument. The land-surface phenology product is, in essence, a method to summarize all the observations throughout a year into a few key, ecologically relevant “metrics”.

Open-File Report

Industrial energy development decouples ungulate migration from the green wave

The ability to freely move across the landscape to track the emergence of nutritious spring green-up (termed ‘green-wave surfing’) is key to the foraging strategy of migratory ungulates. Across the vast landscapes traversed by many migratory herds, habitats are being altered by development with unknown consequences for surfing. Using a unique long-term tracking dataset, we found that when energy development occurs within mule deer ( Odocoileus hemionus ) migration corridors, migrating animals become decoupled from the green wave. During the early phases of a coalbed natural gas development, deer synchronized their movements with peak green-up. But faced with increasing disturbance as development expanded, deer altered their movements by holding up at the edge of the gas field and letting the green wave pass them by. Development often modified only a small portion of the migration corridor but had far-reaching effects on behaviour before and after migrating deer encountered it, thus reducing surfing along the entire route by 38.65% over the 14-year study period. Our study suggests that industrial development within migratory corridors can change the behaviour of migrating ungulates and diminish the benefits of migration. Such disruptions to migratory behaviour present a common mechanism whereby corridors become unprofitable and could ultimately be lost on highly developed landscapes.

Wyoming

Telemetry reveals migratory drivers and disparate space use across seasons and age-groups in American horseshoe crabs

Identifying mechanisms that underpin animal migration patterns and examining variability in space use within populations is crucial for understanding population dynamics and management implications. In this study, we quantified the migration rates, seasonal changes in migratory connectivity, and residency across population demographics (age and sex) to understand the proximate cues of migration timing in American horseshoe crabs ( Limulus polyphemus ). Juvenile ( n = 25) and adult ( n = 70) horseshoe crabs were tracked with acoustic telemetry techniques for a 3-yr period in Moriches Bay, NY. Connectivity metrics and residency probability were quantified through spatial network analysis and empirically derived Markov Chain models (EDMC), respectively. The migratory probability of adult horseshoe crabs between Moriches Bay and the Atlantic Ocean was estimated to be 41.0% (95% CI: 34.0–59.8); in contrast, only 8% (95% CI: 1.2–31.6) of juveniles migrated into the ocean. Migration timing was influenced by the interaction of photoperiod and temperature, revealing seasonal differences in migration timing and a 50% narrower range of photoperiod and temperature over which fall migrations occurred compared to spring. Sex-specific differences in space use and connectivity within each season were largely absent; however, centralized habitats were important for maintaining connectivity across all seasons. EDMC results revealed that when standardized to the number of horseshoe crab detections on each receiver, the centrally located habitats in Moriches Bay and Inlet accounted for >50% of the total relative residency probability within most seasons, indicating these areas may be preferred by adult horseshoe crabs. Ontogenetic differences in maximum spatial extent, space use, and connectivity were observed in the bay, as juveniles exhibited lower linkages between locations ( n = 4) relative to adults ( n = 13) during the same temporal period. Our work highlights the application of novel quantitative approaches for addressing the movement dynamics of horseshoe crabs that can be readily applied to other taxa in the context of wildlife conservation.

New York

The high life: Transport of microbes in the atmosphere

Microbes (bacteria, fungi, algae, and viruses) are the most successful types of life on Earth because of their ability to adapt to new environments, reproduce quickly, and disperse globally. Dispersal occurs through a number of vectors, such as migrating animals or the hydrological cycle, but transport by wind may be the most common way microbes spread. General awareness of airborne microbes predates the science of microbiology. People took advantage of wild airborne yeasts to cultivate lighter, more desirable bread as far back as ancient Egypt by simply leaving a mixture of grain and liquids near an open window. In 1862, Louis Pasteur's quest to disprove spontaneous generation resulted in the discovery that microbes were actually single-celled, living creatures, prevalent in the environment and easily killed with heat (pasteurization). His rudimentary experiments determined that any nutrient medium left open to the air would eventually teem with microbial life because of free-floating, colonizing cells. The same can happen in a kitchen: Opportunistic fungal and bacterial cells cause food items exposed to the air to eventually spoil.

Eos, Transactions, American Geophysical Union

A classification of streamflow patterns across the coastal Gulf of Alaska

Streamflow controls many freshwater and marine processes, including salinity profiles, sediment composition, fluxes of nutrients, and the timing of animal migrations. Watersheds that border the Gulf of Alaska (GOA) comprise over 400,000 km 2 of largely pristine freshwater habitats and provide ecosystem services such as reliable fisheries for local and global food production. Yet no comprehensive watershed-scale description of current temporal and spatial patterns of streamflow exists within the coastal GOA. This is an immediate need because the spatial distribution of future streamflow patterns may shift dramatically due to warming air temperature, increased rainfall, diminishing snowpack, and rapid glacial recession. Our primary goal was to describe variation in streamflow patterns across the coastal GOA using an objective set of descriptors derived from flow predictions at the downstream-most point within each watershed. We leveraged an existing hydrologic runoff model and Bayesian mixture model to classify 4,140 watersheds into 13 classes based on seven streamflow statistics. Maximum discharge timing (annual phase shift) and magnitude relative to mean discharge (amplitude) were the most influential attributes. Seventy-six percent of watersheds by number showed patterns consistent with rain or snow as dominant runoff sources, while the remaining watersheds were driven by rain-snow, glacier, or low-elevation wetland runoff. Streamflow classes exhibited clear mechanistic links to elevation, ice coverage, and other landscape features. Our classification identifies watersheds that might shift streamflow patterns in the near future and, importantly, will help guide the design of studies that evaluate how hydrologic change will influence coastal GOA ecosystems.

Alaska

Increased utilization of storm surge barriers: A research agenda on estuary impacts

Rising coastal flood risk and recent disasters are driving interest in the construction of gated storm surge barriers worldwide, with current studies recommending barriers for at least 11 estuaries in the United States alone. Surge barriers partially block estuary-ocean exchange with infrastructure across an estuary or its inlet and include gated areas that are closed only during flood events. They can alter the stratification and salt intrusion, change sedimentary systems, and curtail animal migration and ecosystem connectivity, with impacts growing larger with increasing gate closures. Existing barriers are being used with increasing frequency due to sea level rise. New barrier proposals typically come with maximum closure frequency recommendations, yet the future adherence to them is uncertain. Given that the broader environmental effects and coupled-human dynamics of surge barriers are not well-understood, we present an interdisciplinary research agenda for this increasingly prevalent modification to our coastal zone.

Earth's Future

Migratory coupling between predators and prey

Animal migrations act to couple ecosystems and are undertaken by some of the world’s most endangered taxa. Predators often exploit migrant prey, but the movements taken by these consumers are rarely studied or understood. We define such movements, where migrant prey induce large-scale movements of predators, as migratory coupling. Migratory coupling can have ecological consequences for the participating prey, predators and the communities they traverse across the landscape. We review examples of migratory coupling in the literature and provide hypotheses regarding conditions favourable for their occurrence. We also provide a framework for interactions induced by migratory coupling and demonstrate their potential community-level impacts by examining other forms of spatial shifts in predators. Migratory coupling integrates the fields of landscape, movement, food web and community ecologies, and represents an understudied frontier in ecology.

Nature Ecology & Evolution

Large herbivores surf waves of green-up during spring

The green wave hypothesis (GWH) states that migrating animals should track or ‘surf’ high-quality forage at the leading edge of spring green-up. To index such high-quality forage, recent work proposed the instantaneous rate of green-up (IRG), i.e. rate of change in the normalized difference vegetation index over time. Despite this important advancement, no study has tested the assumption that herbivores select habitat patches at peak IRG. We evaluated this assumption using step selection functions parametrized with movement data during the green-up period from two populations each of bighorn sheep, mule deer, elk, moose and bison, totalling 463 individuals monitored 1–3 years from 2004 to 2014. Accounting for variables that typically influence habitat selection for each species, we found seven of 10 populations selected patches exhibiting high IRG—supporting the GWH. Nonetheless, large herbivores selected for the leading edge, trailing edge and crest of the IRG wave, indicating that other mechanisms (e.g. ruminant physiology) or measurement error inherent with satellite data affect selection for IRG. Our evaluation indicates that IRG is a useful tool for linking herbivore movement with plant phenology, paving the way for significant advancements in understanding how animals track resource quality that varies both spatially and temporally.

Proceedings of the Royal Society B: Biological Sci

Consequences of migratory coupling of predators and prey when mediated by human actions

Aim Animal migrations influence ecosystem structure, dynamics and persistence of predator and prey populations. The theory of migratory coupling postulates that aggregations of migrant prey can induce large-scale synchronized movements in predators, and this coupling is consequential for the dynamics of ecological communities. The degree to which humans influence these interactions remains largely unknown. We tested whether creation of large resource pulses by humans such as seasonal herding of reindeer Rangifer tarandus and hunting of moose, Alces alces , can induce migratory coupling with Golden Eagles, Aquila chrysaetos, and whether these lead to demographic consequences for the eagles. Location Fennoscandia. Methods We used movement data from 32 tracked Golden Eagles spanning 125 annual migratory cycles over 8 years. We obtained reindeer distribution data through collaboration with reindeer herders based on satellite tracking of reindeer, and moose harvest data from the national hunting statistics for Sweden. We assessed demographic consequences for eagles from ingesting lead from ammunition fragments in moose carcasses through survival estimates and their links with lead concentrations in eagles' blood. Results In spring, eagles migrated hundreds of kilometres to be spatially and temporally coupled with calving reindeer, whereas in autumn, eagles matched their distribution with the location and timing of moose hunt. Juveniles were more likely to couple with reindeer calving, whereas adults were particularly drawn to areas of higher moose harvest. Due to this coupling, eagles ingested lead from spent ammunition in moose offal and carcasses and the resulting lead toxicity increased the risk of mortality by 3.4 times. Main conclusions We show how migratory coupling connects landscape processes and that human actions can influence migratory coupling over large spatial scales and increase demographic risks for predators. We provide vital knowledge towards resolving human–wildlife conflicts and the conservation of protected species over a large spatial and temporal scale.

Diversity and Distributions

Patterns of seabird and marine mammal carcass deposition along the central California coast, 1980-1986

At monthly intervals from February 1980 through December 1986, a 14.5-km section of central California coastline was systematically surveyed for beach-cast carcasses of marine birds and mammals. Five hundred and fifty-four bird carcasses and 194 marine mammal carcasses were found. Common murres, western grebes, and Brandt's cormorants composed 45% of the bird total. California sea lions, sea otters, and harbor seals composed 90% of the mammal total. Several factors appeared to affect patterns of carcass deposition. The El Niño – Southern Oscillation (ENSO) of 1982–1983 was the dominant influence in terms of interannual variation in carcass deposition. During this ENSO, 56% of the seabirds and 48% of the marine mammals washed ashore. Patterns of intra-annual variation were species specific and were related to animal migration patterns, reproduction, and seasonal changes in weather. Nearshore currents and winds influenced the general area of carcass deposition, while beach substrate type and local patterns of sand deposition influenced the location of carcass deposition on a smaller spatial scale. Weekly surveys along a 1.1-km section of coastline indicated that 62% of bird carcasses and 41% of mammal carcasses remained on the beach less than 9 days. Cause of death was determined for only 8% of the carcasses. Oiling was the most common indication of cause of death in birds (6%). Neonates composed 8% of all mammal carcasses.

Canadian Journal of Zoology

Is ungulate migration culturally transmitted? Evidence of social learning from translocated animals

Ungulate migrations are assumed to stem from learning and cultural transmission of information regarding seasonal distribution of forage, but this hypothesis has not been tested empirically. We compared the migratory propensities of bighorn sheep and moose translocated into novel habitats with those of historical populations that had persisted for hundreds of years. Whereas individuals from historical populations were largely migratory, translocated individuals initially were not. After multiple decades, however, translocated populations gained knowledge about surfing green waves of forage (tracking plant phenology) and increased their propensity to migrate. Our findings indicate that learning and cultural transmission are the primary mechanisms by which ungulate migrations evolve. Loss of migration will therefore expunge generations of knowledge about the locations of high-quality forage and likely suppress population abundance.

Idaho, Wyoming

Animal movement in the absence of predation: environmental drivers of movement strategies in a partial migration system

Animal movement strategies including migration, dispersal, nomadism, and residency are shaped by broad-scale spatial-temporal structuring of the environment, including factors such as the degrees of spatial variation, seasonality and inter-annual predictability. Animal movement strategies, in turn, interact with the characteristics of individuals and the local distribution of resources to determine local patterns of resource selection with complex and poorly understood implications for animal fitness. Here we present a multi-scale investigation of animal movement strategies and resource selection. We consider the degree to which spatial variation, seasonality, and inter-annual predictability in resources drive migration patterns among different taxa and how movement strategies in turn shape local resource selection patterns. We focus on adult Galapagos giant tortoises Chelonoidis spp. as a model system since they display many movement strategies and evolved in the absence of predators of adults. Specifically, our analysis is based on 63 individuals among four taxa tracked on three islands over six years and almost 10 6 tortoise re-locations. Tortoises displayed a continuum of movement strategies from migration to sedentarism that were linked to the spatio-temporal scale and predictability of resource distributions. Movement strategies shaped patterns of resource selection. Specifically, migratory individuals displayed stronger selection toward areas where resources were more predictable among years than did non-migratory individuals, which indicates a selective advantage for migrants in seasonally structured, more predictable environments. Our analytical framework combines large-scale predictions for movement strategies, based on environmental structuring, with finer-scale analysis of space-use. Integrating different organizational levels of analysis provides a deeper understanding of the eco-evolutionary dynamics at play in the emergence and maintenance of migration and the critical role of resource predictability. Our results highlight that assessing the potential benefits of differential behavioral responses first requires an understanding of the interactions among movement strategies, resource selection and individual characteristics.

Oikos

Rejoinder: Challenge and opportunity in the study of ungulate migration amid environmental change

Increasingly, animals that migrate long distances to exploit seasonal habitats must traverse political boundaries capable of altering the very ecological gradients that promote migratory behavior. This transboundary aspect of migration presents many new challenges and opportunities for research and conservation (e.g., Bolger et al. 2008, Taillon et al. 2012). Work to date has often focused on physical barriers to movement (roads, fences,and housing and energy development) that can threaten migratory populations to varying degrees (Holdo et al. 2011, Sawyer et al. 2013). However, even in the absence of conspicuous barriers, political and jurisdictional boundaries can bring dramatic differences in land use and conservation policy. What happens to migratory populations when these boundaries alter the resources and refuges that they seek on their seasonal journeys?

Ecology

Benefits of the destinations, not costs of the journeys, shape partial migration patterns

1. The reasons that lead some animals to seasonally migrate, and others to remain in the same area year-round, are poorly understood. Associations between traits, such as body size, and migration provide clues. For example, larger species and individuals are more likely to migrate. 2. One explanation for this size bias in migration is that larger animals are capable of moving faster (movement hypothesis). However, body size is linked to many other biological processes. For instance, the energetic balances of larger animals are generally more sensitive to variation in food density because of body size effects on foraging and metabolism and this sensitivity could drive migratory decisions (forage hypothesis). 3. Identifying the primary selective forces that drive migration ultimately requires quantifying fitness impacts over the full annual migratory cycle. Here, we develop a full annual migratory cycle model from metabolic and foraging theory to compare the importance of the forage and movement hypotheses. We parameterize the model for Galapagos tortoises, which were recently discovered to be size-dependent altitudinal migrants. 4. The model predicts phenomena not included in model development including maximum body sizes, the body size at which individuals begin to migrate, and the seasonal timing of migration and these predictions generally agree with available data. Scenarios strongly support the forage hypothesis over the movement hypothesis. Furthermore, male Galapagos tortoises on Santa Cruz Island would be unable to grow to their enormous sizes without access to both highlands and lowlands. 5. Whereas recent research has focused on links between traits and the migratory phases of the migratory cycle, we find that effects of body size on the non-migratory phases are far more important determinants of the propensity to migrate. Larger animals are more sensitive to changing forage conditions than smaller animals with implications for maintenance of migration and body size in the face of environmental change.

Journal of Animal Ecology

By land, air, and water — U.S. Geological Survey science supporting fish and wildlife migrations throughout North America

Countless species of animals—big game, birds, bats, insects, amphibians, reptiles, and fish—migrate to reach suitable habitats to feed, reproduce, and raise their young. Animal migrations developed over millennia commonly follow migration corridors—unique routes for each species—to move among seasonal habitats. Changes along those corridors, whether from human development (buildings, roads, dams) or from natural disturbances (for example, climate change, drought, fire, flooding, or invasive species), can make them harder to navigate. The U.S. Geological Survey’s Ecosystems Mission Area provides science that assists land managers in mapping, enhancing, protecting, and reconnecting migration corridors critical for diverse fish and wildlife populations that migrate, such as Odocoileus hemionus (mule deer) and Antilocapra americana (pronghorn), trout and salmon, salamanders, tortoises, bats, and Danaus plexippus (monarch butterflies).

North America

Counterintuitive roles of experience and weather on migratory performance

Migration allows animals to live in resource-rich but seasonally variable environments. Because of the costs of migration, there is selective pressure to capitalize on variation in weather to optimize migratory performance. To test the degree to which migratory performance (defined as speed of migration) of Golden Eagles ( Aquila chrysaetos ) was determined by age- and season-specific responses to variation in weather, we analyzed 1,863 daily tracks ( n = 83 migrant eagles) and 8,047 hourly tracks ( n = 83) based on 15 min GPS telemetry data from Golden Eagles and 277 hourly tracks based on 30 s data ( n = 37). Spring migrant eagles traveled 139.75 ± 82.19 km day −1 (mean ± SE; n = 57) and 25.59 ± 11.75 km hr −1 ( n = 55). Autumn migrant eagles traveled 99.14 ± 59.98 km day −1 ( n = 26) and 22.18 ± 9.18 km hr −1 ( n = 28). Weather during migration varied by season and by age class. During spring, best-supported daily and hourly models of 15 min data suggested that migratory performance was influenced most strongly by downward solar radiation and that older birds benefited less from flow assistance (tailwinds). During autumn, best-supported daily and hourly models of 15 min data suggested that migratory performance was influenced most strongly by south–north winds and by flow assistance, again less strongly for older birds. In contrast, models for hourly performance based on data collected at 30 s intervals were not well described by a single model, likely reflecting eagles' rapid responses to the many weather conditions they experienced. Although daily speed of travel was similar for all age classes, younger birds traveled at faster hourly speeds than did adults. Our analyses uncovered strong, sometimes counterintuitive, relationships among weather, experience, and migratory flight, and they illustrate the significance of factors other than age in determining migratory performance.

The Auk

Exploring overlap of feather molting and migration in Tundra Swans using δ2H analysis

Determining the processes that shape the relative timing of energetically-costly events in the annual cycle of migrating birds is important to our understanding of avian phenology and ecology. We paired satellite tracking and hydrogen stable isotope analysis (δ 2 H) to examine the relative timing of two such events – migration and feather molting – in tundra swans from four breeding areas in Alaska, USA. Our results show a trend of increasing intra-individual variability in breast feather δ 2 H values with increasing migration distance, suggesting the overlap of breast feather molting and migration. However, when individual samples were pooled by breeding area, the δ 2 H values of breast and head feathers showed no trend with migration distance, presumably resulting from high levels of inter-individual variability in δ 2 H values within each breeding area. We explore potential reasons for this variability, propose potential mechanisms influencing feather δ 2 H values of tundra swans, and recommend further research into methods for exploring the temporal configuration of events in the annual cycle of migrating birds.

Alaska

Migration corridors and threats in the Gulf of Mexico and Florida Straits for loggerhead sea turtles

Along migration corridors, animals can face natural and anthropogenic threats that differ from those in breeding and non-breeding residence areas. Satellite telemetry can aid in describing the timing and location of these migrations. We use this tool with switching state-space modeling and line kernel density estimates to identify migration corridors of post-nesting adult female loggerhead sea turtles ( Caretta caretta , n = 89 tracks) that nested at five beaches in the Gulf of Mexico. Turtles migrated in both neritic and oceanic areas of the Gulf of Mexico with some exiting the Gulf. High-use migration corridors were found in neritic areas to the west of Florida and also in the Florida Straits. Repeat tracking of post-nesting migrations for eight turtles showed variability in track overlap, ranging from ∼13 to 82% of tracks within 10 km of each other. Migration primarily occurred in July and August. We document the longest known post-nesting migration to-date of a wild adult female loggerhead of >4,300 km, along with an apparent stopover of about 1 month. Migration corridors overlaid on three spatially explicit anthropogenic threats (shipping density, commercial line fishing, and shrimp trawling) showed hotspots in the Florida Straits, off the northwest Florida coast and off the coast of Tampa Bay. Identifying where and at what intensity multiple human activities and natural processes most likely occur is a key goal of Cumulative Effects Assessments. Our results provide the scientific information needed for designing management strategies for this threatened species. Information about this loggerhead migration corridor can also be used to inform adaptive management as threats shift over time.

Alabama, Florida