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USGS2018

A spatial approach to combatting wildlife crime

Poaching can have devastating impacts on animal and plant numbers, and in many countries has reached crisis levels, with illegal hunters employing increasingly sophisticated techniques. Here, we show how geographic profiling – a mathematical technique originally developed in criminology and recently applied to animal foraging and epidemiology – can be adapted for use in investigations of wildlife crime, using data from an eight-year study in Savé Valley Conservancy, Zimbabwe that in total includes more than 10,000 incidents of illegal hunting and the deaths of 6,454 wild animals. Using a subset of these data for which the illegal hunters’ identities are known, we show that the model can successfully identify the illegal hunters’ home villages using the spatial locations of hunting incidences (for example, snares) as input, and show how this can be improved by manipulating the probability surface inside the Conservancy to reflect the fact that – although the illegal hunters mostly live outside the Conservancy, the majority of hunting occurs inside (in criminology, ‘commuter crime’). The results of this analysis – combined with rigorous simulations – show for the first time how geographic profiling can be combined with GIS data and applied to situations with more complex spatial patterns – for example, where landscape heterogeneity means that some parts of the study area are unsuitable (e.g. aquatic areas for terrestrial animals, or vice versa), or where landscape permeability differs (for example, forest bats tending not to fly over open areas). More broadly, these results show how geographic profiling can be used to target anti-poaching interventions more effectively and more efficiently, with important implications for the development of management strategies and conservation plans in a range of conservation scenarios.

Conservation Biology↗

USGS2013

Internet-based Modeling, Mapping, and Analysis for the Greater Everglades (IMMAGE; Version 1.0): web-based tools to assess the impact of sea level rise in south Florida

South Florida's Greater Everglades area is particularly vulnerable to sea level rise, due to its rich endowment of animal and plant species and its heavily populated urban areas along the coast. Rising sea levels are expected to have substantial impacts on inland flooding, the depth and extent of surge from coastal storms, the degradation of water supplies by saltwater intrusion, and the integrity of plant and animal habitats. Planners and managers responsible for mitigating these impacts require advanced tools to help them more effectively identify areas at risk. The U.S. Geological Survey's (USGS) Internet-based Modeling, Mapping, and Analysis for the Greater Everglades (IMMAGE) Web site has been developed to address these needs by providing more convenient access to projections from models that forecast the effects of sea level rise on surface water and groundwater, the extent of surge and resulting economic losses from coastal storms, and the distribution of habitats. IMMAGE not only provides an advanced geographic information system (GIS) interface to support decision making, but also includes topic-based modules that explain and illustrate key concepts for nontechnical users. The purpose of this report is to familiarize both technical and nontechnical users with the IMMAGE Web site and its various applications.

Florida↗

USGS2013

National Park Service Vegetation Inventory Program, Cuyahoga Valley National Park, Ohio

The National Park Service (NPS) Vegetation Inventory Program (VIP) is an effort to classify, describe, and map existing vegetation of national park units for the NPS Natural Resource Inventory and Monitoring (I&M) Program. The NPS VIP is managed by the NPS Biological Resources Management Division and provides baseline vegetation information to the NPS Natural Resource I&M Program. The U.S. Geological Survey (USGS) Vegetation Characterization Program lends a cooperative role in the NPS VIP. The USGS Upper Midwest Environmental Sciences Center, NatureServe, and NPS Cuyahoga Valley National Park (CUVA) have completed vegetation classification and mapping of CUVA. Mappers, ecologists, and botanists collaborated to identify and describe vegetation types within the National Vegetation Classification Standard (NVCS) and to determine how best to map them by using aerial imagery. The team collected data from 221 vegetation plots within CUVA to develop detailed descriptions of vegetation types. Data from 50 verification sites were also collected to test both the key to vegetation types and the application of vegetation types to a sample set of map polygons. Furthermore, data from 647 accuracy assessment (AA) sites were collected (of which 643 were used to test accuracy of the vegetation map layer). These data sets led to the identification of 45 vegetation types at the association level in the NVCS at CUVA. A total of 44 map classes were developed to map the vegetation and general land cover of CUVA, including the following: 29 map classes represent natural/semi-natural vegetation types in the NVCS, 12 map classes represent cultural vegetation (agricultural and developed) in the NVCS, and 3 map classes represent non-vegetation features (open-water bodies). Features were interpreted from viewing color-infrared digital aerial imagery dated October 2010 (during peak leaf-phenology change of trees) via digital onscreen three-dimensional stereoscopic workflow systems in geographic information systems (GIS). The interpreted data were digitally and spatially referenced, thus making the spatial database layers usable in GIS. Polygon units were mapped to either a 0.5 ha or 0.25 ha minimum mapping unit, depending on vegetation type. A geodatabase containing various feature-class layers and tables shows the locations of vegetation types and general land cover (vegetation map), vegetation plot samples, verification sites, AA sites, project boundary extent, and aerial photographic centers. The feature-class layer and relate tables for the CUVA vegetation map provides 4,640 polygons of detailed attribute data covering 13,288.4 ha, with an average polygon size of 2.9 ha. Summary reports generated from the vegetation map layer show map classes representing natural/semi-natural types in the NVCS apply to 4,151 polygons (89.4% of polygons) and cover 11,225.0 ha (84.5%) of the map extent. Of these polygons, the map layer shows CUVA to be 74.4% forest (9,888.8 ha), 2.5% shrubland (329.7 ha), and 7.6% herbaceous vegetation cover (1,006.5 ha). Map classes representing cultural types in the NVCS apply to 435 polygons (9.4% of polygons) and cover 1,825.7 ha (13.7%) of the map extent. Map classes representing non-NVCS units (open water) apply to 54 polygons (1.2% of polygons) and cover 237.7 ha (1.8%) of the map extent. A thematic AA study was conducted of map classes representing natural/semi-natural types in the NVCS. Results present an overall accuracy of 80.7% (kappa index of 79.5%) based on data from 643 of the 647 AA sites. Most individual map-class themes exceed the NPS VIP standard of 80% with a 90% confidence interval. The CUVA vegetation mapping project delivers many geospatial and vegetation data products in hardcopy and/or digital formats. These products consist of an in-depth project report discussing methods and results, which include descriptions and a dichotomous key to vegetation types, map classification and map-class descriptions, and a contingency table showing AA results. The suite of products also includes a database of vegetation plots, verification sites, and AA sites; digital pictures of field sites; field data sheets; aerial photographic imagery; hardcopy and digital maps; and a geodatabase of vegetation types and land cover (map layer), fieldwork locations (vegetation plots, verification sites, and AA sites), aerial photographic index, project boundary, and metadata. All geospatial products are projected in Universal Transverse Mercator, Zone 17, by using the North American Datum of 1983. Information on the NPS VIP and completed park mapping projects are located on the Internet at <http://science.nature.nps.gov/im/inventory/veg> and <http://www.usgs.gov/core_science_systems/csas/vip/index.html>.

Natural Resource Technical Report↗

USGS2016

Through a fish's eye: The status of fish habitats in the United States 2015

This report updates and revises the 2010 “ Status of Fish Habitats in the United States” that summarized initial results of a comprehensive national assessment of aquatic habitats at an unprecedented scale and level of detail. This 2015 report provides even greater detail and improves our knowledge of the condition of fish habitat in the United States. The 2010 inland streams assessment characterized fish habitat condition using stream fish data from more than 26,000 stream reaches, while the 2015 assessment was based on fish data from more than 39,000 stream reaches nationally. To increase accuracy, the 2015 inland stream assessment incorporated 12 additional human disturbance variables into the fish analysis when compared to the 2010 assessment. Associations between all human disturbance variables summarized in both catchments as well as stream buffers were tested against stream fish metrics to develop assessment scores. Additional variables incorporated into the 2015 assessment and their summary within catchments and buffers allowed for more explicit characterization of the diverse set of disturbances to stream fish habitats occurring across the Nation than what occurred in 2010, and this was made possible due in part to advances in available GIS layers. With the incorporation of these additional disturbances, managers and decision makers can use assessment results to more explicitly identify limits to stream fish habitats. Even with the additional disturbances incorporated into 2015 assessment, results may overestimate fish habitat condition, as localized and regionally-specific disturbances are still not available in some cases.

Report↗

USGS2012

Analyzing legacy U.S. Geological Survey geochemical databases using GIS: applications for a national mineral resource assessment

This report emphasizes geographic information system analysis and the display of data stored in the legacy U.S. Geological Survey National Geochemical Database for use in mineral resource investigations. Geochemical analyses of soils, stream sediments, and rocks that are archived in the National Geochemical Database provide an extensive data source for investigating geochemical anomalies. A study area in the Egan Range of east-central Nevada was used to develop a geographic information system analysis methodology for two different geochemical datasets involving detailed (Bureau of Land Management Wilderness) and reconnaissance-scale (National Uranium Resource Evaluation) investigations. ArcGIS was used to analyze and thematically map geochemical information at point locations. Watershed-boundary datasets served as a geographic reference to relate potentially anomalous sample sites with hydrologic unit codes at varying scales. The National Hydrography Dataset was analyzed with Hydrography Event Management and ArcGIS Utility Network Analyst tools to delineate potential sediment-sample provenance along a stream network. These tools can be used to track potential upstream-sediment-contributing areas to a sample site. This methodology identifies geochemically anomalous sample sites, watersheds, and streams that could help focus mineral resource investigations in the field.

Egan Range↗

USGS2007

A GIS Analysis of Seagrass Resources and Condition Within Padre Island National Seashore, Texas

A survey of the seagrass resources of Padre Island National Seashore was conducted in fall 2002 and 2003, with additional sampling through 2006, to resolve distribution questions. Location coordinates were recorded to thousandths of minutes of latitude and longitude and converted to decimal degrees (minus decimal degrees for longitude) for import into ArcView (Environmental Systems Research Institute, Inc.). The seagrass core frequency data were developed as a theme in ArcView and overlaid on digital orthophoto quarter quadrangles of the U.S. Geological Survey to show sample depth with respect to mean sea level and frequency of occurrence of seagrass for five samples collected from every station sampled. These data were used to draw boundaries of area submerged at mean sea level and seagrass meadow in relation to the boundary of Padre Island National Seashore. Frequency of seagrass occurrence, mean plant height, shoot density, plant height multiplied by shoot density, live biomass, and dead biomass on a 1' latitude by 0.25' longitude grid were collected, and their distribution was plotted in space and according to depth. A User Guide for displaying data in ArcView is included at the end of this report. Seagrasses covered almost two-thirds of the regularly flooded part of Laguna Madre within the borders of Padre Island National Seashore. Comparisons with earlier surveys showed that substantial areas of seagrass cover had been lost in deep water between 1988 and 1998 as a result of a persistent phytoplankton bloom, and little recovery has occurred since. Maximum depth of seagrass occurrence responded to changes in water clarity. In contrast, much of the cover at shallow to intermediate depths lost at the south end of the study area between 1988 and 1998 was replaced by 2003. The seven stations with greatest plant height were located in this area of recent recolonization. Continuity of cover as measured by frequency of occurrence was high except near the edge of seagrass meadow. Decrease in this measure may be an indicator of meadow fragmentation, signaling deterioration of seagrass meadow before loss. The other measures of condition were so variable that they were insensitive indicators of impending change.

Open-File Report↗

USGS2012

Recent and historic sediment dynamics along Difficult Run, a suburban Virginia Piedmont stream

Suspended sediment is one of the major concerns regarding the quality of water entering the Chesapeake Bay. Some of the highest suspended-sediment concentrations occur on Piedmont streams, including Difficult Run, a tributary of the Potomac River draining urban and suburban parts of northern Virginia. Accurate information on catchment level sediment budgets is rare and difficult to determine. Further, the sediment trapping portion of sediment budget represents an important ecosystem service that profoundly affects downstream water quality. Our objectives, with special reference to human alterations to the landscape, include the documentation and estimation of floodplain sediment trapping (present and historic) and bank erosion along an urbanized Piedmont stream, the construction of a preliminary sediment balance, and the estimation of legacy sediment and recent development impacts. We used white feldspar markers to measure floodplain sedimentation rates and steel pins to measure erosion rates on floodplains and banks, respectively. Additional data were collected for/from legacy sediment thickness and characteristics, mill pond impacts, stream gaging station records, topographic surveying, and sediment density, texture, and organic content. Data were analyzed using GIS and various statistical programs. Results are interpreted relative to stream equilibrium affected by both post-colonial bottomland sedimentation (legacy) and modern watershed hardening associated with urbanization. Six floodplain/channel sites, from high to low in the watershed, were selected for intensive study. Bank erosion ranges from 0 to 470 kg/m/y and floodplain sedimentation ranges from 18 to 1369 kg/m/y (m refers to meters of stream reach). Upstream reaches are net erosional, while downstream reaches have a distinctly net depositional flux providing a watershed sediment balance of 2184 kg/m/y trapped within the system. The amounts of both deposition and erosion are large and suggest nonequilibrium channel conditions. Both peak discharge and number of peaks above base have substantially increased since the mid-1960s when urbanization of the watershed began. Deposition patterns are most closely correlated with channel gradient, sinuosity, and channel width/floodplain width for recent and historic periods. The substantial amounts of fine grained sediment deposited on the floodplain over the past two centuries or so do not appear to be closely related to historic mill pond presence or location. The floodplain continues to provide the critical ecosystem service of sediment trapping in the face of multiple human alterations. Trends in sediment deposition/erosion may react rapidly to land use practices within the watershed and offer a valuable barometer of the effects of management actions.

Geomorphology↗

USGS1995

Watershed characterization for precipitation-runoff modeling system, north fork, American River and east fork, Carson River watersheds, California

As part of its Global Change Hydrology Program, the U.S. Geological Survey (USGS) is investigating the potential effects of climate change on the water resources of several river basins in the United States. The American River Basin in California represents the windward slope of the north-central Sierra Nevada, and the California part of the Carson River Basin, most of which is in Nevada, represents the leeward slope. Parts of the American River and Carson River Basins—the North Fork American River and East Fork Carson River watersheds, both in California—were studied to determine the sensitivity of water resources to potential climate change. The water resources of both basins are derived primarily from snowmelt. A geographic information system (GIS) data base has been created to facilitate paired-basin analysis. The GIS data base incorporates (1) land-surface data, which include elevation, land use and land cover, soil type, and geology; (2) hydrologic data, such as stream networks and streamflow-gaging stations; and (3) climatic data, such as snow-course, snow-telemetry, radiosonde, and meteorological data. Precipitation-runoff models were developed and calibrated for the North Fork watershed within the American River Basin and for the East Fork watershed within the Carson River Basin. (These watersheds were selected to represent the climatic and physiographic variability of the two larger basins.) Synthesized climate scenarios then were used in the model to predict potential effects of climate change.

Hydrologic Atlas↗

USGS2026

A three-dimensional geologic framework model of the northern Great Plains region of Montana, North Dakota, South Dakota, and Wyoming, USA

This report presents a new three-dimensional geologic framework model (GFM) of the northern Great Plains region, encompassing parts of Montana, North Dakota, South Dakota, and Wyoming. The model provides a regionally consistent, geographic information system (GIS)-ready representation of Phanerozoic sedimentary strata, major fault systems, and Precambrian basement geometry across two sedimentary basins and adjacent uplifts. More than 300,000 geologic and geophysical data inputs were synthesized to model 41 stratigraphic horizons and 47 faults, yielding an internally coherent, sealed-volume interpretation of the subsurface. The modeling workflow developed for this study demonstrates an efficient and scalable approach for constructing basin-to regional-scale GFMs in geologically complex and data-variable settings. Although model fidelity varies with data density and quality, the resulting geometry is broadly consistent with 1:500,000-scale geologic mapping and highlights areas where additional geologic study is most needed. The three-dimensional GFM provides a foundational framework to support groundwater, energy, and mineral resource assessments, and offers a transferable methodology for potential future U.S. Geological Survey efforts to build large-area subsurface models in underexplored regions of the United States.

Montana, North Dakota, South Dakota, Wyoming↗

USGS2009

Volcanogenic Massive Sulfide Deposits of the World - Database and Grade and Tonnage Models

Grade and tonnage models are useful in quantitative mineral-resource assessments. The models and database presented in this report are an update of earlier publications about volcanogenic massive sulfide (VMS) deposits. These VMS deposits include what were formerly classified as kuroko, Cyprus, and Besshi deposits. The update was necessary because of new information about some deposits, changes in information in some deposits, such as grades, tonnages, or ages, revised locations of some deposits, and reclassification of subtypes. In this report we have added new VMS deposits and removed a few incorrectly classified deposits. This global compilation of VMS deposits contains 1,090 deposits; however, it was not our intent to include every known deposit in the world. The data was recently used for mineral-deposit density models (Mosier and others, 2007; Singer, 2008). In this paper, 867 deposits were used to construct revised grade and tonnage models. Our new models are based on a reclassification of deposits based on host lithologies: Felsic, Bimodal-Mafic, and Mafic volcanogenic massive sulfide deposits. Mineral-deposit models are important in exploration planning and quantitative resource assessments for two reasons: (1) grades and tonnages among deposit types vary significantly, and (2) deposits of different types occur in distinct geologic settings that can be identified from geologic maps. Mineral-deposit models combine the diverse geoscience information on geology, mineral occurrences, geophysics, and geochemistry used in resource assessments and mineral exploration. Globally based deposit models allow recognition of important features and demonstrate how common different features are. Well-designed deposit models allow geologists to deduce possible mineral-deposit types in a given geologic environment and economists to determine the possible economic viability of these resources. Thus, mineral-deposit models play a central role in presenting geoscience information in a useful form to policy makers. The foundation of mineral-deposit models is information about known deposits. The purpose of this publication is to present the latest geologic information and newly developed grade and tonnage models for VMS deposits in digital form. This publication contains computer files with information on VMS deposits from around the world. It also presents new grade and tonnage models for three subtypes of VMS deposits and a text file allowing locations of all deposits to be plotted in geographic information system (GIS) programs. The data are presented in FileMaker Pro and text files to make the information available to a wider audience. The value of this information and any derived analyses depends critically on the consistent manner of data gathering. For this reason, we first discuss the rules used in this compilation. Next, we provide new grade and tonnage models and analysis of the information in the file. Finally, the fields of the data file are explained. Appendix A gives the summary statistics for the new grade-tonnage models and Appendix B displays the country codes used in the database.

Open-File Report↗

USGS2013

Porphyry copper assessment of Southeast Asia and Melanesia: Chapter D in Global mineral resource assessment

The U.S. Geological Survey collaborated with member countries of the Coordinating Committee for Geoscience Programmes in East and Southeast Asia (CCOP) on an assessment of the porphyry copper resources of Southeast Asia and Melanesia as part of a global mineral resource assessment. The region hosts world-class porphyry copper deposits and underexplored areas that are likely to contain undiscovered deposits. Examples of known porphyry copper deposits include Batu Hijau and Grasberg in Indonesia; Panguna, Frieda River, and Ok Tedi in Papua New Guinea; and Namosi in Fiji. This assessment covers the countries of Cambodia, Indonesia, Lao People’s Democratic Republic, Malaysia, Myanmar, Papua New Guinea, Singapore, Thailand, and parts of southeastern China, India, the Solomon Islands, Vanuatu, and Fiji. Twenty-two geographic areas were delineated as tracts that are permissive for porphyry copper deposits in Southeast Asia. Permissive tracts are grouped into four broadly defined geographic/geologic areas, as follows: (1) the Indochina Peninsula area, (2) Indonesian and Malaysian Islands, (3) New Guinea Island and Papuan New Guinea islands, and (4) Melanesia. Individual tracts range from less than 1,000 to more than 350,000 square kilometers in area. Permissive tracts are based on mapped and inferred subsurface (<1 kilometer depth) distributions of igneous rocks of specific age ranges that define magmatic arcs and magmatic belts that are likely to contain porphyry copper deposits. Most of these magmatic arcs are subduction-related, although some have porphyry-style deposits occurring in postcollisional and (or) poorly understood tectonic settings. Although maps at a variety of different scales were used in the compilation, the final tract boundaries are intended for use at a scale of 1:1,000,000. Global grade and tonnage models for porphyry copper deposits were evaluated. Most of the known deposits are best described as fitting the copper-gold (Cu-Au) subtype of porphyry copper deposit. For some permissive tracts, a general porphyry copper-gold-molybdenum (Cu-Au-Mo) model was used. Assessment participants estimated numbers of undiscovered deposits at different levels of confidence for most of the permissive tracts. These estimates were combined with grade and tonnage models using a Monte Carlo simulation to estimate undiscovered resources. Additional resources in extensions of deposits with identified resources were not evaluated. Assessment results, presented in tables and graphs, show mean amounts of metal and mineralized rock in undiscovered deposits at different quantile levels, as well as the arithmetic mean for each tract. This assessment estimated a mean of 89 undiscovered porphyry copper deposits for the assessed permissive tracts in Southeast Asia and Melanesia. About 288 million metric tons (Mt) of copper and 18,000 metric tons (t) of gold, as well as byproduct molybdenum and silver, could be associated with undiscovered deposits. This represents about four times the number of deposits with identified resources (23) already discovered in Southeast Asia; reliable reported identified resources for those 23 deposits total 84 Mt of copper and 6,000 t of gold. Eleven permissive tracts have no known porphyry copper deposits with reported resources. Three of those 11 tracts lacked sufficient information for a probabilistic assessment and are discussed in qualitative terms. On a regional basis, both the Indochina Peninsula area and the Indonesian-Malaysian Islands area are estimated to contain about 10 times as much in place copper in undiscovered porphyry copper deposits as has been identified to date. For the New Guinea Island areas, the ratio of undiscovered to identified copper resources is about 2. Some parts of the region have a long history of porphyry exploration cycles and mine development, interrupted at times by political and social unrest, environmental concerns, and natural disasters. Changes in mining laws within the region and the recent high price of gold on the world market have prompted renewed interest in porphyry copper deposits in Southeast Asia and Melanesia. However, predicted undiscovered deposits may not be found, and if found, may not be developed. This assessment includes an overview of the assessment results with summary tables. Detailed descriptions of each tract are included in appendixes, with estimates of numbers of undiscovered deposits, and probabilistic estimates of amounts of copper, molybdenum, gold, and silver that could be contained in undiscovered deposits for each permissive tract. A geographic information system (GIS) that accompanies the report includes tract boundaries and a database of known porphyry copper deposits and significant prospects.

Scientific Investigations Report↗

USGS2013

Identification of metrics to monitor salt marsh integrity on National Wildlife Refuges in relation to conservation and management objectives

Executive Summary Most salt marshes in the US have been degraded by human activities, and threats from physical alterations, surrounding land-use, species invasions, and global climate change persist. Salt marshes are unique and highly productive ecosystems with high intrinsic value to wildlife, and many National Wildlife Refuges (NWRs) have been established in coastal areas to protect large tracts of salt marsh and wetland-dependent species. Various management practices are employed routinely on coastal NWRs to restore and enhance marsh integrity and ensure ecosystem sustainability. Prioritizing NWR salt marshes for application of management actions and choosing among multiple management options requires scientifically-based methods for assessing marsh condition. Monitoring is integral to structured decision-making (SDM), a formal process for decomposing a decision into its essential elements. Within a natural resource context, SDM involves identifying management objectives, alternative management actions, and expected management outcomes. The core of SDM is a set of criteria for measuring system performance and evaluating management responses. Therefore, use of SDM to frame natural resource decisions leads to logical selection of monitoring attributes that are linked explicitly to management needs. We used SDM to guide selection of variables for monitoring the ecological integrity of salt marshes within the National Wildlife Refuge System (NWRS). Our objectives were to identify indicators of salt marsh integrity that are effective across large geographic regions, responsive to a wide range of threats, and feasible to implement within funding and staffing constraints of the NWRS. In April, 2008, we engaged interdisciplinary experts in a week-long rapid prototyping SDM workshop to define the essential elements of salt marsh management decisions on refuges throughout the northeastern, southwestern, and northwestern US, corresponding to respective Regions 5, 2, and 1 of the US Fish and Wildlife Service (FWS). Through this process we identified measurable attributes for monitoring salt marsh ecosystems that are integrated into conservation practice and target management objectives. The following salt marsh attributes were identified through the SDM process either for describing state condition to determine management needs or for evaluating the achievement of management objectives: historical condition and geomorphic setting; ditch density; surrounding land use; ratio of open water area to vegetation area; rate of pesticide application; environmental contaminant concentration; change in marsh surface elevation relative to sea level rise; tidal range and groundwater level; surface topography; salinity; and species composition and abundance of vegetation, invasive species, invertebrates, nekton, and breeding and wintering birds. The identified attributes were too broadly defined to serve as operational monitoring variables. Therefore, we tested specific metrics for quantifying most of these attributes in summers of 2008 and 2009. The first four attributes in the above list can be characterized by office-based analysis of existing GIS data layers. The remaining attributes require field-based methods for assessment. We were forced to exclude a small number of attributes from field tests due to inconsistent data (pesticide application rate, environmental contaminant concentrations) or requirements that exceeded the scope of this project (change in marsh surface elevation; surface topography; benthic invertebrates; wintering birds). We evaluated potential metrics for evaluating all remaining field attributes. In partnership with NWRS biologists, we tested rapid versus intensive metrics for monitoring field attributes (tidal range and groundwater level; marsh surface elevation; salinity; and species composition and abundance of vegetation, invasive species, nekton, and breeding birds) at coastal refuges throughout FWS Region 5. Seven refuges participated in metric testing in 2008: Rachel Carson (ME), Parker River (MA), Wertheim (NY), E. B. Forsythe (NJ), Bombay Hook (DE), Prime Hook (DE), and Eastern Shore of Virginia Complex (VA). These seven and two additional refuges participated in metric testing in 2009: Rhode Island Complex (RI) and Stewart B. McKinney (CT). We based all field metrics on existing protocols for salt marsh assessment. Sampling locations were determined randomly within delineated marsh study units (MSUs) at each refuge. Detailed field methods are provided in appendices to this report. Measurements for individual metrics were averaged across samples within MSUs during each year of sampling. Each year, correlation or regression analysis was conducted on average measurements across MSUs within each attribute set to identify redundant metrics. Statistical redundancy between a pair of metrics within an attribute set (i.e., correlation or regression slopes with p-values < 0.05) was considered justification for eliminating one of the pair from the regional set of monitoring metrics. Decisions regarding metric elimination versus retention were based on feasibility of monitoring, considering such factors as sampling time, resources required, and potential for regional standardization in implementation. The result of these tests is a reduced suite of monitoring metrics that targets NWRS management decisions and is practicable for implementing on a regional scale. Based on these tests, we recommend the following list of metrics for monitoring integrity of NWRS salt marshes (marsh attribute category is in parentheses): (historical condition and geomorphic setting) position of marsh in the landscape, marsh shape, degree of fill and/or fragmentation, degree of tidal flushing, amount of aquatic edge; (ditch density) ranking of ditch density from none to severe; (surrounding land use) relative proportion of agricultural land in a 150-m buffer around the marsh, relative proportion of natural land in a 150-m buffer around the marsh, relative proportion of natural land in a 1-km buffer around the marsh; (ratio of open water area to vegetation area) ratio of open water to emergent herbaceous wetlands within the marsh; (marsh surface elevation) elevation referenced to NAVD88 in a representative area of the marsh; (tidal range and groundwater level) percent of time the marsh surface is flooded during deployment of a continuous water-level monitor at a representative marsh location, mean depth of surface flooding as measured by a continuous water-level monitor at a representative location; (salinity) salinity measured in surface water; (vegetation community) vegetation species richness using the point-intercept method in 100-m diameter survey plots, percent cover of various marsh community types within 100-m diameter survey plots; (invasive species abundance) percent cover of invasive plant species measured using the point-intercept method in 100-m diameter survey plots; (nekton community) nekton density, nekton species richness, length of Fundulus heteroclitus ; (breeding bird community) abundance of Willets counted per point during standard call-broadcast surveys, summed abundance of tidal marsh obligate species (Clapper Rail, Willet, Saltmarsh Sparrow, Seaside Sparrow) counted per point during standard call-broadcast surveys. Metrics describing the historical condition, geomorphic setting, and broad landscape features can be assessed using existing GIS databases. Our results support use of rapid methods to assess the majority of field metrics; only those used to describe the nekton community must be measured using intensive methods (throw traps or ditch nets, dependant on habitat configuration). Implementation of these metrics for quantitative assessment of NWRS salt marsh integrity in FWS Region 5 requires developing sampling designs for each refuge. Additionally, it is important to determine how the monitoring information will be used within a management context. SDM should be used to complete the analysis of salt marsh management decisions. The next steps would involve 1) prioritizing and weighting the management objectives; 2) predicting responses to individual management actions in terms of objectives and metrics; 3) using multiattribute utility theory to convert all measurable attributes to a common utility scale; 4) determining the total management benefit of each action by summing utilities across objectives; and 5) maximizing the total management benefits within cost constraints for each refuge. This process would allow the optimum management decisions for NWRS salt marshes to be selected and implemented based directly on monitoring data and current understanding of marsh responses to management actions. Monitoring the outcome of management actions would then allow new monitoring data to be incorporated into subsequent decisions.

Connecticut, Delaware, Maine, Massachusetts, New J↗

USGS2011

The development of an EDSS: Lessons learned and implications for DSS research

The Solar and Wind Energy Resource Assessment (SWERA) project is focused on providing renewable energy (RE) planning resources to the public. Examples include wind, solar, and hydro assessments. SWERA DSS consists of three major components. First, SWERA 'Product Archive' provides for a discovery DSS upon which users can find and access renewable energy data and supporting models. Second, the 'Renewable Resource EXplorer' (RREX) component serves as a web-based, GIS analysis tool for viewing RE resource data available through the SWERA Product Archive. Third, the SWERA web service provides computational access to the data available in the SWERA spatial database through a location based query, and is also utilized in the RREX component. We provide a discussion of various design decisions used in the construction of this EDSS, followed by project experiences and implications for EDSS and broader DSS research.

Conference Paper↗

USGS2008

Mobility statistics and automated hazard mapping for debris flows and rock avalanches

Power-law equations that are physically motivated and statistically tested and calibrated provide a basis for forecasting areas likely to be inundated by debris flows, rock avalanches, and lahars with diverse volumes. The equations A=α 1 V 2/3 and B=α 2 V 2/3 are based on the postulate that the maximum valley cross-sectional area (A) and total valley planimetric area (B) likely to be inundated by a flow depend only on its volume (V) and the topography of the flow path. Testing of these equations involves determining whether or not they fit data for documented flows satisfactorily, and calibration entails determining best-fit values of the coefficients α 1 and α 2 for debris flows, rock avalanches, and lahars. This report describes statistical testing and calibration of the equations by using field data compiled from many sources, and it describes application of the equations to delineation of debris-flow hazard zones. Statistical results show that for each type of flow (debris flows, rock avalanches, and lahars), the dependence of A and B on V is described well by power laws with exponents equal to 2/3. This value of the exponent produces fits that are effectively indistinguishable from the best fits obtained by using adjustable power-law exponents. Statistically calibrated values of the coefficients α 1 and α 2 provide scale-invariant indices of the relative mobilities of rock avalanches (α 1 = 0.2, α 2 = 20), nonvolcanic debris flows (α 1 = 0.1, α 2 = 20), and lahars (α 1 = 0.05, α 2 = 200). These values show, for example, that a lahar of specified volume can be expected to inundate a planimetric area ten times larger than that inundated by a rock avalanche or nonvolcanic debris flow of the same volume. The utility of the calibrated debris-flow inundation equations A=0.1V 2/3 and B=20V 2/3 is demonstrated by using them within the GIS program LAHARZ to delineate nested hazard zones for future debris flows in an area bordering the Umpqua River in the south-central Oregon Coast Range. This application requires use of high-resolution topographic data derived form LIDAR surveys, knowledge of local geology to specify a suitable range of prospective debris-flow volumes, and development and use of a new algorithm for identification of prospective debris-flow source areas in finely dissected terrain.

Oregon↗

USGS2023

Relating absolute abundance of an estuarine fish to habitat area in an urbanizing environment

Organisms that rely on salt marsh habitat are an important trophic link, helping to maintain estuarine ecosystem productivity. We used GIS to quantify intertidal (assumed salt marsh) area from aerial photographs taken in 1939 and from software-supplied satellite imagery taken in 2021 for tidal creeks in North Carolina (USA) that have experienced minor (<20%), moderate (20-60%), or substantial (>60%) losses of intertidal habitat over the 8 decades. The current (2022) absolute abundance of adult Fundulus heteroclitus , a trophically important resident fish in US Atlantic estuaries, was estimated over each season in each creek by fitting a Lincoln-Petersen model to tag-recapture data. Current abundances of F. heteroclitus were lowest in creeks with the lowest intertidal area. The median and 2.5/97.5 credible intervals of the posterior probability distribution for the slope of a regression model relating current fish abundance to current intertidal area were positive, demonstrating that intertidal area was a meaningful covariate of abundance. Loss of intertidal area in the creeks between 1939 and 2021 ranged from 8 to 93%. The correlation between current intertidal area and historical loss of this habitat was negative and significant (Pearson r = -0.91, p = 0.012). Parameters from the regression relating current abundance to intertidal area were used to estimate historic F. heteroclitus abundances in each creek using GIS-derived estimates of historic intertidal area. Historic abundances were predicted to have been on average (across study creeks) 7.5 times greater in 1939 than in 2022. Reduced abundances, and thus reduced trophic relay by F. heteroclitus to higher-order consumers, can be expected in estuaries that have lost salt marsh due to inter-decadal development.

Marine Ecologly Progressive Series↗

USGS2007

Surficial sediment character of the New York-New Jersey offshore continental shelf region: A GIS compilation

Broad continental shelf regions such as the New York Bight are the product of a complex geologic history and dynamic oceanographic processes, dominated by the Holocene marine transgression (>100 m sea-level rise) following the end of the last Pleistocene ice advance ~ 20,000 years ago. The area of the U.S. Exclusive Economic Zone (U.S. EEZ) territory, extending 200 nautical miles seaward from the coast, is larger than the continental U.S. and contains submerged landforms that provide a variety of natural functions and societal benefits, such as: critical habitats for fisheries, ship navigation and homeland security, and engineering activities (i.e. oil and gas platforms, pipeline and cable routes, potential wind-energy-generation sites). Some parts of the continental margins, particularly inner-continental shelf regions, also contain unconsolidated hard-mineral deposits such as sand and gravel that are regarded as potential aggregate resources to meet or augment needs not met by onshore deposits (Williams, 1992). The present distribution of surficial sediment off the northeastern United States is shaped from the deposits left by the last glaciation and reflects the cumulative effects of sediment erosion, transport, sorting, and deposition by storm and tidal processes during the Holocene rise in sea level. As a result, the sediments on the sea floor represent both an historical record of former conditions and a guide to possible future sedimentary environments. The U.S. Geological Survey (USGS) through the Coastal and Marine Geology Program, in cooperation with the University of Colorado and other partners, has compiled extant sediment character and textural data as well as other geologic information on the sea floor from all regions around the U.S. into the usSEABED data system (Reid and others, 2005; Buczkowski and others, 2006; Reid and others, 2006). The usSEABED system, which contains information on sediment grain size and lithology for more than 340,500 stations within the U.S. EEZ. has been developed and populated with data as part of the USGS Marine Aggregate Resources and Processes and the National Benthic Habitats projects in order to provide the base-line data needed to update the current maps of offshore surficial geologic character and sediment distribution. The maps are also used to characterize benthic sea floor environments important for marine ecosystems. U.S. Geological Survey, Data Series 118 (Reid and others, 2005), of the usSEABED data release series, represents the combined efforts of the USGS and several other government agencies to provide a unified resource for accessing and preserving records of U.S. east coast sea floor geologic information and sediment texture data. For this present report, we have chosen to focus on the New York-New Jersey region, an area that has been intensely studied by the USGS for many years to address many complex issues. This report illustrates the uses of the usSEABED database for GIS applications, while offering additional insight into the resources and data available from the USGS and its collaborative institutions. This report is based on data contained in U.S. Geological Survey Data Series 118 (Reid and others, 2005) and shows an assortment of example GIS products that are possible using usSEABED. All data are intended to be GIS-ready and should not require any additional cleanup, formatting, or renaming of fields in order to use the data in a Geographic Information System. This project employs the Environmental Systems Research Institute's (ESRI) ArcView™ software. Many of these maps were made as part of the ongoing USGS study to assess marine aggregate resources offshore New York and New Jersey, but these maps can serve many other purposes. The marine science community, educators, students and others are encouraged to use these data to generate GIS products for their own purposes. The objectives of the Marine Aggregate Resources and Processes project are to produce a series of new geologic maps and reports of the sea floor that will provide scientific insights into the character and geologic development of U.S. continental margins and to use these maps and information to assess the potential availability of offshore sand and gravel resources. The mapping and aggregate resource assessments are being conducted on a national scale using the usSEABED data base as described in Williams and others (2003). Potential uses for these data include: (1) defining the geological variability of the sea floor in relation to benthic habitat diversity; (2) improving our understanding of the processes that control the distribution and transport of bottom sediments and benthic habitats; (3) locating aggregate resources for beach nourishment and industrial applications; and (4) providing a detailed geospatial framework for future marine science research, monitoring, and management activities. The initial assessments are in progress for the New York Bight and Louisiana offshore areas.

New Jersey, New York↗

USGS2000

Using new video mapping technology in landscape ecology

Biological and ecological monitoring continues to play an important role in the conservation of species, natural communities, and landscapes ( Spellerberg 1991 ). Although resource-monitoring programs have advanced knowledge about natural ecosystems, weaknesses persist in our ability to rapidly transfer landscape-scale information to the public. Ecologists continue to search for new technologies to address this problem and to communicate natural resource information quickly and effectively. New video mapping technology may provide much-needed help. Ecologists realize that only a small portion of large nature reserves can be monitored because of cost and logistical constraints. However, plant and animal populations are usually patchily distributed in subpopulations scattered throughout heterogeneous landscapes, and they are often associated with rare habitats. These subpopulations and rare habitats may respond differently to climate change, land use, and management practices such as grazing, fire suppression, prescribed burning, or invasion of exotic species ( Stohlgren et al. 1997b ). In many national parks, monuments, and wildlife reserves, a few long-term monitoring plots are used to infer the status and trends of natural resources in much larger areas. To make defensible inferences about populations, habitats, and landscapes, it is necessary to extrapolate from a few monitoring plots (local scale) to the larger, unsampled landscape with known levels of accuracy and precision. Recent technological developments have given population biologists and landscape ecologists a unique tool for bridging the data gap between small, intensively sampled monitoring plots and the greater landscape and for transferring this information quickly to resource managers and the public. In this article, we briefly describe this tool, a hand-held video mapping system linked to a geographic information system (GIS). We provide examples of its use in quantifying patterns of native and exotic plant species and cryptobiotic crusts in the new Grand Staircase–Escalante National Monument, Utah, and in surveying aspen clones and regeneration in Rocky Mountain National Park, Colorado.

BioScience↗

USGS2008

Inventory of Data Sources Used for Watershed Condition Assessments of Fire Island National Seashore, Gateway National Recreation Area, and Sagamore Hill National Historic Site, New York and New Jersey

The natural resources and watershed conditions of National Park units in the New York-New Jersey area - Gateway National Recreation Area (GATE), Sagamore Hill National Historic Site (SAHI), and Fire Island National Seashore (FIIS) - are threatened by different degrees of urbanization and direct or indirect human use. Such threats as nutrient enrichment, sedimentation, exotic species invasion, water pollution, and development pose serious management concerns for these parks. Limited investigations of the status of different natural resources at or near each park have been conducted, but a comprehensive understanding of the natural resources and watershed conditions at FIIS, GATE, and SAHI is needed. This report details the sources of spatial data and metadata assembled into a Geographic Information System (GIS) for the purpose of assessing natural resources and watershed conditions at GATE, SAHI, and FIIS.

Open-File Report↗