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Monitoring for conservation

Human-mediated environmental changes have resulted in appropriate concern for the conservation of ecological systems and have led to the development of many ecological monitoring programs worldwide. Many programs that are identified with the purpose of `surveillance? represent an inefficient use of conservation funds and effort. Here, we revisit the 1964 paper by Platt and argue that his recommendations about the conduct of science are equally relevant to the conduct of ecological monitoring programs. In particular, we argue that monitoring should not be viewed as a stand-alone activity, but instead as a component of a larger process of either conservation-oriented science or management. Corresponding changes in monitoring focus and design would lead to substantial increases in the efficiency and usefulness of monitoring results in conservation.

Trends in Ecology and Evolution

Science to support conservation action in a large river system: The Willamette River, Oregon, USA

Management and conservation efforts that support the recovery and protection of large rivers are daunting, reflecting the complexity of the challenge and extent of effort (in terms of policy, economic investment, and spatial extent) needed to afford measurable change. These large systems have generally experienced intensive development and regulation, compromising their capacity to respond to disturbances such as climate change or wildfire. Functionally, large river and basin management require insights gained from social, ecological, geophysical, and hydrological sciences. This multi-disciplinary perspective can unveil the integrated relationship between a river network's biotic community and seasonally variable environmental conditions that are often influenced by human activities. Large rivers and their basins are constantly changing due to anthropogenic influences and as climate modifies patterns of temperature and precipitation. Because of these factors, the state of knowledge must advance to address changing conditions. The Willamette River, in western Oregon, USA, is a prime example of a basin that has experienced significant degradation and investment in rehabilitation in recent decades. Innovative science has facilitated development of fine-scale, spatially extensive datasets and models that can generate targeted conservation and rehabilitation actions that are prioritized across the entire river network. This prioritization allows investment decisions to be driven by site-specific conditions while simultaneously considering potentials for ecological improvement. Here, we review hydrologic, geomorphic, ecologic, and social conditions in the Willamette River basin through time—including pre-settlement, river development, and contemporary periods—and offer a future vision for consideration. Currently, detailed information about fish populations and habitat, hydrologic conditions, geomorphology, water quality, and land use can be leveraged to make informed decisions about protection, rehabilitation, and development. The time is ripe for strategic management and goal development for the entire Willamette River, and these efforts can be informed by comprehensive science realized through established institutions (e.g., public agencies, non-profit watershed groups, Tribes, and universities) focused on conservation and management. The approaches to science and social-network creation that were pioneered in the Willamette River basin offer insights into the development of comprehensive conservation-based planning that could be implemented in other large river systems globally.

Oregon

Control of a dominant predator influences the occurrence of a mesocarnivore of conservation concern

Context Interspecific interactions shape ecological communities, influence community dynamics, and drive co-evolution. Despite their ecological significance, predation and competition remain understudied in plains spotted skunks ( Spilogale interrupta ), a species of conservation concern. Clarifying how predator management influences their occurrence is crucial for effective conservation. Aims We investigated how coyote ( Canis latrans ) management affects the occupancy of plains spotted skunks and whether interspecific interactions with domestic cats ( Felis catus ) and striped skunks ( Mephitis mephitis ) influence plains spotted skunk occurrence. Methods We analysed live-trap data from east-central South Dakota collected in spring of 2021 and 2022. The study area encompassed portions of counties that implemented disparate predator management regimes, including one with systematic annual coyote removal and another without. We used single-species occupancy models to estimate detection and occupancy probabilities for plains spotted skunks, domestic cats, and striped skunks, incorporating environmental factors, including the site-specific predator control regime. We then applied conditional two-species occupancy models to test whether cats and striped skunks influenced plains spotted skunk occurrence. Key results Plains spotted skunks had the lowest occupancy, followed by domestic cats, and striped skunks. Our findings showed significant associations between coyote removal and occupancy probabilities for each mesocarnivore species. Plains spotted skunks had higher occupancy in areas where coyotes were annually removed. Spotted skunk occurrence was not conditional on either domestic cat or striped skunk occurrence. Conclusions In our study system, cats appear to pose less predation risk to spotted skunks than do other predators, reducing the likelihood that cats significantly influence spotted skunk occupancy. Defensive behaviours and use of spatial refugia by plains spotted skunks may further mitigate predation risk. In addition, co-evolutionary pressures may have led to trait adaptations that facilitate the independent co-occurrence of plains spotted skunks and striped skunks. Implications Our findings highlighted the ecological consequences of predator management and the importance of considering predator–prey dynamics in conservation and management planning. Strategies aimed at conserving plains spotted skunks should integrate predator control measures while considering broader mesocarnivore community interactions.

South Dakota

Conservation-form equations of unsteady open-channel flow

The unsteady open-channel flow equations are typically expressed in a variety of forms due to the imposition of differing assumptions, use of varied dependent variables, and inclusion of different source/sink terms. Questions often arise as to whether a particular equation set is expressed in a form consistent with the conservation-law definition. The concept of conservation form is developed to clarify the meaning mathematically. Six sets of unsteady-flow equations typically used in engineering practice are presented and their conservation properties are identified and discussed. Results of the theoretical development and analysis of the equations are substantiated in a set of numerical experiments conducted using alternate equation forms. Findings of these analytical and numerical efforts demonstrate that the choice of dependent variable is the fundamental factor determining the nature of the conservation properties of any particular equation form.

Journal of Hydraulic Research

Conservation and management of crayfishes: Lessons from Pennsylvania

North America's crayfish fauna is diverse, ecologically important, and highly threatened. Unfortunately, up‐to‐date information is scarce, hindering conservation and management efforts. In Pennsylvania and nearby states, recent efforts allowed us to determine the conservation status of several native crayfishes and develop management strategies for those species. Due to rarity and proximity to urban centers and introduced (exotic) crayfishes, Cambarus (Puncticambarus) sp., an undescribed member of the Cambarus acuminatus complex, is critically imperiled in Pennsylvania and possibly range‐wide. Orconectes limosus is more widespread; however, recent population losses have been substantial, especially in Pennsylvania, and northern Maryland, where its range has declined (retreated eastward) by greater than 200 km. Introduced congeners likely played a major role in those losses. Although extirpated from some areas, Cambarus bartonii bartonii remains widespread and is not an immediate conservation concern. In light of these findings, the role of barriers (e.g., dams), environmental protection, educational programs, and regulations in preventing crayfish invasions and conserving native crayfishes is discussed, and management initiatives centered on those factors are presented. The need for methods to eliminate exotics and monitor natives is highlighted. Although tailored to a specific regional fauna, these ideas have broad applicability and would benefit many North American crayfishes.

Pennsylvania

Book review: Black bass diversity: Multidisciplinary science for conservation

These proceedings are from the third symposium dedicated to management and conservation of black basses in the genus Micropterus . The first symposium was held in 1975 (R. H. Stroud and H. Clepper. Black Bass Biology and Management . Washington (DC): Sport Fishing Institute) followed 25 years later by Black Bass 2000 (D. P. Philipp and M. S. Ridgway. 2002. Black Bass: Ecology, Conservation, and Management . Bethesda (MD): American Fisheries Society). Although the previous books discussed conservation of genetic variation and distinct strains of basses, the bulk of the papers in those tomes emphasized management of largemouth and smallmouth bass. In contrast, this third symposium is focused on the rarer bass species and challenges for their successful management. Review info: Black bass diversity: Multidisciplinary science for conservation . Edited by Michael D. Tringali, James M. Long, Timothy W. Birdsong, and Michael S. Allen, 2015. ISBN: 978-1-934874-40-0, 685 pp.

The Quarterly Review of Biology

The challenges of success: Future wolf conservation and management in the United States

Gray wolf ( Canis lupus ) recovery and conservation has been a remarkable success over the last 30 years in the United States. Remarkable success yields remarkable challenges, however. As populations expand, wolves will colonize more human-dominated landscapes and face numerous challenges, such as fragmented habitats, barriers to dispersal, and increased encounters with humans, pets, and livestock. In such areas, conflicts between humans and wolves will increase. We summarize several major scientific and social challenges that wolf conservation, recovery, and management will face in the coming years. In addition, we suggest actions to help address each challenge. Future wolf conservation in the United States will be affected by the ability of managers to predict colonization and dispersal dynamics, to reduce hybridization and disease transmission, to mitigate and deter wolf–livestock conflicts, to harvest wolves sustainably while satisfying diverse stakeholders, to avert a reduction in tolerance for wolves due to a disinterest in nature, and to engage diverse stakeholders in wolf conservation to avoid management by ballot initiative or legislative and judicial decrees.

contiguous United States

Shorebird subsistence harvest and indigenous knowledge in Alaska: Informing harvest assessment and management, and engaging users in shorebird conservation

Limited data on harvest and population parameters are major impediments to assess shorebird harvest sustainability. Because of sharp declines in shorebird populations, timely conservation efforts require approaches that account for uncertainty in harvest sustainability. We combined harvest assessment and ethnographic research to better understand shorebird conservation concerns related to subsistence harvest in Alaska and to support culturally sensible conservation actions. Our objectives were to (1) estimate the Alaska-wide shorebird subsistence harvest and (2) document shorebird indigenous knowledge on the Yukon-Kuskokwim Delta. Harvest estimates were based on surveys conducted in 1990–2015 (n = 775 community-years). Key respondent interviews conducted in 2017 (n = 72) documented shorebird ethnotaxonomy and ethnography. The Alaska-wide shorebird harvest was 2,783 birds per year. Harvest of godwits was relatively low (1,115 birds per year) and likely included mostly Bar-tailed Godwits Limosa lapponica baueri, but this population has a low harvest potential. The egg harvest was 4,676 eggs per year, mostly small shorebird eggs. We documented 24 Yup’ik shorebird names and 10 main ethnotaxonomic categories. Children learning harvesting skills focused on small birds and adults also occasionally harvested shorebirds, but shorebirds were not primary food or cultural resources. Older generations associated shorebirds with a time when people were in closer contact with nature and their cultural roots. Shorebirds connected people with the environment as well as with Yup’ik traditions and language. Our results can inform improvements to harvest assessment and management, as well as outreach and communication efforts to engage subsistence users in shorebird conservation.

Alaska

On the importance and practical conservation of nongame fishes.

Fisheries management has historically focused conservation efforts on game or sport species. However, most species are nongame—those not traditionally captured for sport or harvest in countries where recreational fisheries predominate. Greater conservation of nongame species could help ensure that population declines do not go unnoticed. Unfortunately, fisheries managers already manage complex ecosystems with limited resources, and they frequently are directed to focus on game fishes. However, game fish populations can also be tightly coupled to nongame fishes, so nongame management can sometimes also benefit game species. We reviewed functional roles of freshwater nongame fishes and suggest categories that may be especially important for conservation. Of note, nongame fishes are more imperiled than game fishes and fill largely distinct functional roles. These roles include food-web impacts, ecosystem engineering, and mussel hosting. Management priorities could include nongame piscivores and species with high biomass, especially herbivores, nest builders, and imperiled mussel hosts. We provide practical options for including nongame fishes in current management, many of which require little additional funding. These include recognizing when sport fish funding and conservation can also benefit nongame species, whole-community sampling at some monitoring locations, collecting catch data for select species observed during game fish surveys, embracing environmental DNA sampling, and making presence–absence record keeping the default option.

Fisheries

Conserving habitat for migratory ungulates: How wide is a migration corridor?

Conserving migratory ungulates relies on the analysis of GPS collar data and associated maps of migration corridors to inform management and policy actions. Current methods for identifying migratory corridors use complex statistical models designed to account for movement uncertainty rather than estimating the amount of space required by animals to migrate. Furthermore, such methods can complicate conservation efforts by producing highly variable corridor widths and non-contiguous corridors that do not fully connect seasonal ranges. To remedy, we propose an intuitive line buffer approach for delineating individual migration corridors that is simple to implement and focuses on the functional corridor widths needed by migratory ungulates. By buffering a line that connects successive GPS locations, we can delineate individual migration corridors with consistent widths that are robust to variable parameters (GPS fix rate, travel speed, tortuosity) and provide contiguous connection between seasonal ranges. Using a combination of expert knowledge, simulation and 10-min GPS collar data collected from mule deer ( Odocoileus hemionus ) and pronghorn ( Antilocapra americana ), we suggest 400–600 m are reasonable estimates of functional migration corridor widths for individuals of those species. Synthesis and applications . Our line buffer approach is intended to simplify migration corridor delineation, improve transparency and encourage a broader discussion of functional corridor widths. These considerations help advance efforts to conserve habitat within migration corridors and prioritize conservation efforts within a single corridor or across multiple corridors.

Journal of Applied Ecology

Aggregating three sources of long-term trends of swallows and martins to identify priority conservation areas in the Great Lakes region

1. Long-term monitoring of bird populations across scales is important in evaluating conservation targets and creating effective conservation strategies. For nearly six decades, the Breeding Bird Survey (BBS) has served as the primary broad-scaled source of relative abundance trends of swallows and martins in North America. Recently, however, it has become possible to obtain breeding population trends using semi-structured eBird community science data. Moreover, weather surveil-lance radar data of swallow and martin roosting populations yield a third complementary source of trend information. 2. Using results from these three approaches, we propose a novel method of spatially combining estimates of percent change per year into a probability of directional agreement and/or disagreement that describes (1) the direction of the trend within a given region, (2) the amount of evidence associated with the estimate and (3) how much uncertainty surrounds it. We focus our efforts on an area of high Hirundinidae concentration in the North American Great Lakes region and predict trends from 2012 to 2022. 3. We found a high probability of agreement between all three sources about ob-served declines in swallow and martin trends in the region surrounding Lake Ontario and to the west of Lake Michigan. Focusing future research on these regions could improve our understanding of these declines and help build more targeted conservation initiatives. 4. Synthesis and applications. Our data integration methodology allows managers to identify regions that accumulate evidence of concerning trends across multiple wildlife monitoring schemes. These regions can thus be prioritized in conservation and management efforts. This approach can be generalized to other sources of long-term monitoring data of different species, at different stages of their annual cycle, in any geographic location.

Great Lakes region

Perspectives and challenges for the use of radar in biological conservation

Radar is at the forefront for the study of broad‐scale aerial movements of birds, bats and insects and related issues in biological conservation. Radar techniques are especially useful for investigating species which fly at high altitudes, in darkness, or which are too small for applying electronic tags. Here, we present an overview of radar applications in biological conservation and highlight its future possibilities. Depending on the type of radar, information can be gathered on local‐ to continental‐scale movements of airborne organisms and their behaviour. Such data can quantify flyway usage, biomass and nutrient transport (bioflow), population sizes, dynamics and distributions, times and dimensions of movements, areas and times of mass emergence and swarming, habitat use and activity ranges. Radar also captures behavioural responses to anthropogenic disturbances, artificial light and man‐made structures. Weather surveillance and other long‐range radar networks allow spatially broad overviews of important stopover areas, songbird mass roosts and emergences from bat caves. Mobile radars, including repurposed marine radars and commercially dedicated ‘bird radars’, offer the ability to track and monitor the local movements of individuals or groups of flying animals. Harmonic radar techniques have been used for tracking short‐range movements of insects and other small animals of conservation interest. However, a major challenge in aeroecology is determining the taxonomic identity of the targets, which often requires ancillary data obtained from other methods. Radar data have become a global source of information on ecosystem structure, composition, services and function and will play an increasing role in the monitoring and conservation of flying animals and threatened habitats worldwide.

Ecography

Signatures of adaptive divergence among populations of an avian species of conservation

Understanding the genetic underpinning of adaptive divergence among populations is a key goal of evolutionary biology and conservation. Gunnison sage‐grouse ( Centrocercus minimus ) is a sagebrush obligate species with a constricted range consisting of seven discrete populations, each with distinctly different habitat and climatic conditions. Though geographically close, populations have low levels of natural gene flow resulting in relatively high levels of differentiation. Here, we use 15,033 SNP loci in genomic outlier analyses, genotype–environment association analyses, and gene ontology enrichment tests to examine patterns of putatively adaptive genetic differentiation in an avian species of conservation concern. We found 411 loci within 5 kbp of 289 putative genes associated with biological functions or pathways that were overrepresented in the assemblage of outlier SNPs. The identified gene set was enriched for cytochrome P450 gene family members (CYP4V2, CYP2R1, CYP2C23B, CYP4B1) and could impact metabolism of plant secondary metabolites, a critical challenge for sagebrush obligates. Additionally, the gene set was also enriched with members potentially involved in antiviral response (DEAD box helicase gene family and SETX). Our results provide a first look at local adaption for isolated populations of a single species and suggest adaptive divergence in multiple metabolic and biochemical pathways may be occurring. This information can be useful in managing this species of conservation concern, for example, to identify unique populations to conserve, avoid translocation or release of individuals that may swamp locally adapted genetic diversity, or guide habitat restoration efforts.

Arizona, Colorado, New Mexico, Utah

A mosaic-based approach is needed to conserve biodiversity in disturbed freshwater ecosystems

Conserving native biodiversity in the face of human‐ and climate‐related impacts is a challenging and globally important ecological problem that requires an understanding of spatially connected, organismal‐habitat relationships. Globally, a suite of disturbances (e.g., agriculture, urbanization, climate change) degrades habitats and threatens biodiversity. A mosaic approach (in which connected, interacting collections of juxtaposed habitat patches are examined) provides a scientific foundation for addressing many disturbance‐related, ecologically based conservation problems. For example, if specific habitat types disproportionately increase biodiversity, these keystones should be incorporated into research and management plans. Our sampling of fish biodiversity and aquatic habitat along ten 3‐km sites within the Upper Neosho River subdrainage, KS, from June‐August 2013 yielded three generalizable ecological insights. First, specific types of mesohabitat patches (i.e., pool, riffle, run, and glide) were physically distinct and created unique mosaics of mesohabitats that varied across sites. Second, species richness was higher in riffle mesohabitats when mesohabitat size reflected field availability. Furthermore, habitat mosaics that included more riffles had greater habitat diversity and more fish species. Thus, riffles (<5% of sampled area) acted as keystone habitats. Third, additional conceptual development, which we initiate here, can broaden the identification of keystone habitats across ecosystems and further operationalize this concept for research and conservation. Thus, adopting a mosaic approach can increase scientific understanding of organismal‐habitat relationships, maintain natural biodiversity, advance spatial ecology, and facilitate effective conservation of native biodiversity in human‐altered ecosystems.

Kansas

Long-term population dynamics and conservation risk of migratory bull trout in the upper Columbia River basin

We used redd count data from 88 bull trout (Salvelinus confluentus) populations in the upper Columbia River basin to quantify local and regional patterns in population dynamics, including adult abundance, long-term trend, and population synchrony. We further used this information to assess conservation risk of metapopulations using eight population dynamic metrics associated with persistence. Local population abundances were generally low (<20 redds annually) and the majority of trends were either stable (85%) or declining (13%). Evidence of synchrony among populations was apparent but not related to fluvial distance between streams. Variability in annual abundances was 1.4–2.5 times lower in metapopulations than local populations, indicating moderate portfolio effects across the regional stock complex. Importantly, most metrics of conservation risk were uncorrelated with one another, emphasizing that multiple statistics describing population dynamics at various scales are needed for monitoring and assessing recovery. We provide a composite description of conservation risk based on local and regional population dynamics that can help inform conservation management decisions for bull trout and other freshwater fishes.

Idaho, Montana

The needs of salmon and steelhead in balancing their conservation and use

Over the past 100 years, Pacific salmon Oncorhynchus spp. and steelhead trout O. mykiss populations in the Pacific Northwest have experienced dramatic declines as a result of human population growth and associated development of the region's natural resources. Any strategy to reverse those declines will depend on achieving consensus among a diverse group of stakeholders willing to (1) restore damaged habitats and watersheds; (2) consider the biological needs of salmonid fishes; and (3) understand, conserve, and manage existing levels of biodiversity within an ecosystem context. The objective of this chapter is to review and summarize the needs of Pacific salmon and steelhead trout from perspectives that promote their sustainability and perpetuity, and, within that context, provide a framework, for the development of a sustainable fisheries strategy. Although volumes of information are available on the life histories and habitat requirements of Pacific salmonids, new concepts have begun to address the importance of habitat complexity, genetic diversity among locally adapted populations, and the need for appropriate units of conservation. Habitat variability and complexity are the templates that produce diverse, locally adapted populations of Pacific salmon and steelhead trout. Molded by conditions in the environments they colonized, salmon and steelhead have unique adaptations they may have taken hundred i?? perhaps thousands i?? of years to evolve. Any strategy to reverse the declines of salmon and steelhead must focus on conserving both current levels of genetic diversity as well as restoration and maintenance of habitats compatible with the specific needs of individual populations. An argument can be made that we know enough already about the needs of our salmon and steelhead to allow us to make appropriate decisions. There is strong need to integrate what we know about local salmonid adaptations and habitat needs with conservation and management strategies that address the problems we have created. It may be possible to have healthy, sustainable salmonid populations coastwide if we do not wait too long to make up our minds.

Book chapter

Indicators of the statuses of amphibian populations and their potential for exposure to atrazine in four midwestern U.S. conservation areas

Extensive corn production in the midwestern United States has physically eliminated or fragmented vast areas of historical amphibian habitat. Midwestern corn farmers also apply large quantities of fertilizers and herbicides, which can cause direct and indirect effects on amphibians. Limited field research regarding the statuses of midwestern amphibian populations near areas of corn production has left resource managers, conservation planners, and other stakeholders needing more information to improve conservation strategies and management plans. We repeatedly sampled amphibians in wetlands in four conservation areas along a gradient of proximity to corn production in Illinois, Iowa, Minnesota, and Wisconsin from 2002 to 2005 and estimated site occupancy. We measured frequencies of gross physical deformities in recent metamorphs and triazine concentrations in the water at breeding sites. We also measured trematode infection rates in kidneys of recently metamorphosed Lithobates pipiens collected from nine wetlands in 2003 and 2004. We detected all possible amphibian species in each study area. The amount of nearby row crops was limited in importance as a covariate for estimating site occupancy. We observed deformities in <5% of metamorphs sampled and proportions were not associated with triazine concentrations. Trematode infections were high in metamorphs from all sites we sampled, but not associated with site triazine concentrations, except perhaps for a subset of sites sampled in both years. We detected triazines more often and in higher concentrations in breeding wetlands closer to corn production. Triazine concentrations increased in floodplain wetlands as water levels rose after rainfall and were similar among lotic and lentic sites. Overall, our results suggest amphibian populations were not faring differently among these four conservation areas, regardless of their proximity to corn production, and that the ecological dynamics of atrazine exposure were complex.

Illinois;Iowa;Minnesota;Wisconsin

Invasive predator diet plasticity has implications for native fish conservation and invasive species suppression

Diet plasticity is a common behavior exhibited by piscivores to sustain predator biomass when preferred prey biomass is reduced. Invasive piscivore diet plasticity could complicate suppression success; thus, understanding invasive predator consumption is insightful to meeting conservation targets. Here, we determine if diet plasticity exists in an invasive apex piscivore and whether plasticity could influence native species recovery benchmarks and invasive species suppression goals. We compared diet and stable isotope signatures of invasive lake trout and native Yellowstone cutthroat trout (cutthroat trout) from Yellowstone Lake, Wyoming, U.S.A. as a function of no, low-, moderate-, and high-lake trout density states. Lake trout exhibited plasticity in relation to their density; consumption of cutthroat trout decreased 5-fold (diet proportion from 0.89 to 0.18) from low- to high-density state. During the high-density state, lake trout switched to amphipods, which were also consumed by cutthroat trout, resulting in high diet overlap (Schoener’s index value, D = 0.68) between the species. As suppression reduced lake trout densities (moderate-density state), more cutthroat trout were consumed (proportion of cutthroat trout = 0.42), and diet overlap was released between the species (D = 0.30). A shift in lake trout δ 13 C signatures from the high- to the moderate-density state also corroborated increased consumption of cutthroat trout and lake trout diet plasticity. Observed declines in lake trout are not commensurate with expected cutthroat trout recovery due to lake trout diet plasticity. The abundance of the native species in need of conservation may take longer to recover due to the diet plasticity of the invasive species. The changes observed in diet, diet overlap, and isotopes associated with predator suppression provides more insight into conservation and suppression dynamics than using predator and prey biomass alone. By understanding these dynamics, we can better prepare conservation programs for potential feedbacks caused by invasive species suppression.

PLoS ONE