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USGS2011

Climatic controls on the snowmelt hydrology of the northern Rocky Mountains

The northern Rocky Mountains (NRMs) are a critical headwaters region with the majority of water resources originating from mountain snowpack. Observations showing declines in western U.S. snowpack have implications for water resources and biophysical processes in high-mountain environments. This study investigates oceanic and atmospheric controls underlying changes in timing, variability, and trends documented across the entire hydroclimatic-monitoring system within critical NRM watersheds. Analyses were conducted using records from 25 snow telemetry (SNOTEL) stations, 148 1 April snow course records, stream gauge records from 14 relatively unimpaired rivers, and 37 valley meteorological stations. Over the past four decades, midelevation SNOTEL records show a tendency toward decreased snowpack with peak snow water equivalent (SWE) arriving and melting out earlier. Temperature records show significant seasonal and annual decreases in the number of frost days (days ≤0°C) and changes in spring minimum temperatures that correspond with atmospheric circulation changes and surface–albedo feedbacks in March and April. Warmer spring temperatures coupled with increases in mean and variance of spring precipitation correspond strongly to earlier snowmeltout, an increased number of snow-free days, and observed changes in streamflow timing and discharge. The majority of the variability in peak and total annual snowpack and streamflow, however, is explained by season-dependent interannual-to-interdecadal changes in atmospheric circulation associated with Pacific Ocean sea surface temperatures. Over recent decades, increased spring precipitation appears to be buffering NRM total annual streamflow from what would otherwise be greater snow-related declines in hydrologic yield. Results have important implications for ecosystems, water resources, and long-lead-forecasting capabilities.

Idaho, Montana↗

USGS2011

Observations of debris flows at Chalk Cliffs, Colorado, USA: Part 1, in-situ measurements of flow dynamics, tracer particle movement and video imagery from the summer of 2009

Debris flows initiated by surface-water runoff during short duration, moderate- to high-intensity rainfall are common in steep, rocky, and sparsely vegetated terrain. Yet large uncertainties remain about the potential for a flow to grow through entrainment of loose debris, which make formulation of accurate mechanical models of debris-flow routing difficult. Using a combination of in situ measurements of debris flow dynamics, video imagery, tracer rocks implanted with passive integrated transponders (PIT) and pre- and post-flow 2-cm resolution digital terrain models (terrain data presented in a companion paper by STALEY et alii, 2011), we investigated the entrainment and transport response of debris flows at Chalk Cliffs, CO, USA. Four monitored events during the summer of 2009 all initiated from surface-water runoff, generally less than an hour after the first measurable rain. Despite reach-scale morphology that remained relatively constant, the four flow events displayed a range of responses, from long-runout flows that entrained significant amounts of channel sediment and dammed the main-stem river, to smaller, short-runout flows that were primarily depositional in the upper basin. Tracer-rock travel-distance distributions for these events were bimodal; particles either remained immobile or they travelled the entire length of the catchment. The long-runout, large-entrainment flow differed from the other smaller flows by the following controlling factors: peak 10-minute rain intensity; duration of significant flow in the channel; and to a lesser extent, peak surge depth and velocity. Our growing database of natural debris-flow events can be used to develop linkages between observed debris-flow transport and entrainment responses and the controlling rainstorm characteristics and flow properties.

Colorado↗

USGS2005

Modeling tritium transport through a deep unsaturated zone in an arid environment

Understanding transport of tritium ( 3 H) in unsaturated zones is critical to evaluating options for waste isolation. Tritium typically is a large component of low-level radioactive waste (LLRW). Studies at the U.S. Geological Survey's Amargosa Desert Research Site (ADRS) in Nevada investigate 3 H transport from a closed LLRW facility. Two boreholes are 100 and 160 m from the nearest waste trench and extend to the water table at 110 m. Soil-water vapor samples from the deep boreholes show elevated levels of 3 H at all depths. The objectives of this study were to (i) test source thermal and gas-advection mechanisms driving 3 H transport and (ii) evaluate model sensitivity to these mechanisms and to selected physical and hydraulic properties including porosity, tortuosity, and anisotropy. A two-dimensional numerical model incorporated a non-isothermal, heterogeneous domain of the unsaturated zone and instantaneous isotopic equilibrium. The TOUGH2 code was used; however, it required modification to account for temperature dependence of both the Henry's law equilibrium constant and isotopic fractionation with respect to tritiated water. Increases in source temperature, pressure, and porosity enhanced 3 H migration, but failed to match measured 3 H distributions. All anisotropic simulations with a source pressure component resembled, in shape, the upper portion of the 3 H distribution of the nearest borehole. Isotopic equilibrium limited migration of 3 H, while effects of radioactive decay were negligible. A 500 Pa pressure increase above ambient pressure in conjunction with a high degree of anisotropy (1:100) was necessary for simulated 3 H transport to reach the nearest borehole.

Vadose Zone Journal↗

USGS2011

Biology, status, and management of the yellowstone cutthroat trout

Yellowstone cutthroat trout Oncorhynchus clarkii bouvieri were historically distributed in the Yellowstone River drainage (Montana and Wyoming) and the Snake River drainage (Wyoming, Idaho, Utah, Nevada, and probably Washington). Individual populations evolved distinct life history characteristics in response to the diverse environments in which they were isolated after the last glaciation. Anthropogenic activities have resulted in a substantial decline (42% of the historical range is currently occupied; 28% is occupied by core [genetically unaltered] populations), but the number of extant populations, especially in headwater streams, has precluded listing of this taxon under the Endangered Species Act. Primary threats to persistence of Yellowstone cutthroat trout include (1) invasive species, resulting in hybridization, predation, disease, and interspecific competition; (2) habitat degradation from human activities such as agricultural practices, water diversions, grazing, dam construction, mineral extraction, grazing, timber harvest, and road construction; and (3) climate change, including an escalating risk of drought, wildfire, winter flooding, and rising temperatures. Extirpation of individual populations or assemblages has led to increasing isolation and fragmentation of remaining groups, which in turn raises susceptibility to the demographic influences of disturbance (both human and stochastic) and genetic factors. Primary conservation strategies include (1) preventing risks associated with invasive species by isolating populations of Yellowstone cutthroat trout and (2) connecting occupied habitats (where possible) to preserve metapopulation function and the expression of multiple life histories. Because persistence of isolated populations may be greater in the short term, current management is focused on isolating individual populations and restoring habitats; however, this approach implies that humans will act as dispersal agents if a population is extirpated because of stochastic events.

Idaho, Montana, Utah, Wyoming↗

USGS2015

The influence of a severe reservoir drawdown on springtime zooplankton and larval fish assemblages in Red Willow Reservoir, Nebraska

Reservoirs can be dynamic systems, often prone to unpredictable and extreme water-level fluctuations, and can be environments where survival is difficult for zooplankton and larval fish. Although numerous studies have examined the effects of extreme reservoir drawdown on water quality, few have examined extreme drawdown on both abiotic and biotic characteristics. A fissure in the dam at Red Willow Reservoir in southwest Nebraska necessitated an extreme drawdown; the water level was lowered more than 6 m during a two-month period, reducing reservoir volume by 76%. During the subsequent low-water period (i.e., post-drawdown), spring sampling (April–June) showed dissolved oxygen concentration was lower, while turbidity and chlorophyll- a concentration were greater, relative to pre-drawdown conditions. Additionally, there was an overall increase in zooplankton density, although there were differences among taxa, and changes in mean size among taxa, relative to pre-drawdown conditions. Zooplankton assemblage composition had an average dissimilarity of 19.3% from pre-drawdown to post-drawdown. The ratio of zero to non-zero catches was greater post-drawdown for larval common carp and for all larval fishes combined, whereas we observed no difference for larval gizzard shad. Larval fish assemblage composition had an average dissimilarity of 39.7% from pre-drawdown to post-drawdown. Given the likelihood that other dams will need repair or replacement in the near future, it is imperative for effective reservoir management that we anticipate the likely abiotic and biotic responses of reservoir ecosystems as these management actions will continue to alter environmental conditions in reservoirs.

Nebraska↗

USGS2026

Network-wide assessment of soil water content calibration and sensitivity to biomass proxies using cosmic-ray neutron sensing in the Roaring Fork Basin, Colorado

Soil water content (SWC) is a key state variable of the climate system but is often uncertain in water balance monitoring, especially in alpine environments. SWC measurements can be challenging in alpine environments due to the topography and rocky soils. In 2022, the US Geological Survey's Next Generation Water Observing System Program began research to evaluate water balance monitoring technologies, including cosmic-ray neutron sensors (CRNS). This work evaluated the uncertainty resulting from network-wide calibration of CRNS for SWC monitoring in an alpine watershed and investigated the stability of the calibration parameters across space and time, focusing on potential influence of biomass dynamics. Fifteen stations with moderated and unmoderated (bare) CRNS were deployed and made operational within the Roaring Fork Basin in west-central Colorado. The root mean squared error of the network-wide calibration using the moderated CRNS was 0.042 or 0.047 cm 3 cm −3 , depending on the calibration equation used. Relative SWC dynamics from CRNS were correlated with the in situ probes with a correlation coefficient of 0.91 or 0.87 (depending on calibration equation). We did not find significant relationships between the calibration parameters and stationary site-specific variables. However, the calibration parameters derived from in situ probe SWC dynamics varied over time and were correlated with biomass proxies of cumulative growing degree-day, cumulative growing season index, and bare neutron counts. Future use of the CRNS network can leverage the reliable relative SWC data from network-wide calibration for watershed modeling and continue to research sensitivity of bare neutron measurements to biomass dynamics.

Colorado↗

USGS2022

Virtual special issue of recent advances on gas hydrates scientific drilling in Alaska

Gas hydrate refers to a non-stoichiometric clathrate that forms spontaneously in the natural environment whenever sufficient quantities of gases of appropriate size (most commonly methane) interact with abundant water under specific conditions of temperature and pressure. (1,2) Such conditions occur wherever the shallow geothermal gradient has been suppressed by either deepwater or thick permafrost, allowing for relatively low temperatures to coexist with elevated pressures. The volume of gas hydrate on Earth is difficult to constrain, (3) but it is sufficient that gas hydrate is a meaningful potential component of (1) the long-term natural cycling of carbon, (2) the nearer term environmental changes in response to warming climates, (4) and (3) future energy supply systems. Since the initial recognition of gas hydrate as an abundant component in nature in the late 1960s, a series of scientific drilling expeditions conducted by both the Integrated Ocean Discovery Program (and successors) and national research and development programs in Canada, Japan, China, the United States, South Korea, and others (5) have explored the occurrence and nature of gas hydrates. In particular, the desire for expanded energy supply options to support the economic development and energy security for nations around the globe is currently motivating a broad range of laboratory and numerical simulation studies in support of an ongoing series of field-based scientific tests of the potential commercial viability of gas extraction from natural gas hydrate deposits. (6)

Journal of Energy & Fuels↗

USGS2016

Theory and application of semiochemicals in nuisance fish control

Controlling unwanted, or nuisance, fishes is becoming an increasingly urgent issue with few obvious solutions. Because fish rely heavily on semiochemicals, or chemical compounds that convey information between and within species, to mediate aspects of their life histories, these compounds are increasingly being considered as an option to help control wild fish. Possible uses of semiochemicals include measuring their presence in water to estimate population size, adding them to traps to count or remove specific species of fish, adding them to waterways to manipulate large-scale movement patterns, and saturating the environment with synthesized semiochemicals to disrupt responses to the natural cue. These applications may be especially appropriate for pheromones, chemical signals that pass between members of same species and which also have extreme specificity and potency. Alarm cues, compounds released by injured fish, and cues released by potential predators also could function as repellents and be especially useful if paired with pheromonal attractants in “push-pull” configurations. Approximately half a dozen attractive pheromones now have been partially identified in fish, and those for the sea lamprey and the common carp have been tested in the field with modest success. Alarm and predator cues for sea lamprey also have been tested in the laboratory and field with some success. Success has been hampered by our incomplete understanding of chemical identity, a lack of synthesized compounds, the fact that laboratory bioassays do not always reflect natural environments, and the relative difficulty of conducting trials on wild fishes because of short field seasons and regulatory requirements. Nevertheless, workers continue efforts to identify pheromones because of the great potential elucidated by insect control and the fact that few tools are available to control nuisance fish. Approaches developed for nuisance fish also could be applied to valued fishes, which suffer from a lack of powerful management tools.

Journal of Chemical Ecology↗

USGS1978

Uranium in waters and aquifer rocks at the Nevada Test Site, Nye County, Nevada

Previous chemical, geological, and hydrological information describing the physical and chemical environment of the Nevada Test Site (a Federal reserve for the testing of nuclear explosive devices) has been combined with new radiochemical and isotope data for water and rock samples in order to explain the behavior of uranium during alteration of thick sequences of rhyolitic volcanic rocks and associated volcaniclastic sediments. A model is proposed in which uranium mobility is controlled by two competing processes. Uranium is liberated from the volcanic rocks through dissolution of the glassy constituents and is carried in solution as a uranyl carbonate complex. Uranium is subsequently removed from solution by adsorption on secondary oxides of iron, titanium, and manganese, as observed in fission-track maps of aquifer rocks. The model explains the poor correlation of dissolved uranium with depth within tuffaceous sequences in which percolation of ground water is predominantly downward. Good positive correlation of dissolved uranium with dissolved Na, total dissolved solids, and total carbonate supports the glass dissolution model, while inverse correlation of dissolved uranium with U 234 /U 238 ratios of waters implies uranium is being absorbed by a relatively insoluble, surficial phase. Alpha radioactivity of Test Site water is primarily caused by high U 234 contents, and beta activity is highly correlated with dissolved K (K 40 ). Small amounts of dissolved radium, Pb 210 , and Po 210 are present but no evidence was found for alpha activity sources related to nuclear testing (Pu, U 235 ). A filtered but unacidified carbonate solution of uranium was found to be stable (± 10 percent of original U concentration) for years when stored in acid-washed polyethylene bottles.

Nevada↗

USGS2021

The Mars Orbiter for Resources, Ices, and Environments (MORIE) science goals and instrument trades in radar, imaging, and spectroscopy

The Mars Orbiter for Resources, Ices, and Environments (MORIE) was selected as one of NASA's 2019 Planetary Mission Concept Studies. The mission builds upon recent discoveries and current knowledge gaps linked to two primary scientific questions: (1) when did elements of the cryosphere form and how are ice deposits linked to current, recent, and ancient climate, and (2) how does the crust record the evolution of surface environments and their transition through time? Addressing these questions has emerged in numerous recent reports as a high priority in investigating the evolution of Mars as a habitable world. A subsidiary goal of the mission concept is to provide information relevant to the eventual human exploration of Mars, specifically helping to locate and quantify near-surface water ice and hydrated mineral resources. The proposed instrument suite includes polarimetric synthetic aperture radar imaging, radar sounding, high-resolution visible and infrared imaging, both short-wave and thermal-infrared spectroscopy, and multichannel wide-angle imaging. MORIE would provide novel measurements of Mars expected to lead to significant new discoveries by the first radar imaging from orbit, radar sounding directly over the poles, and mineral mapping at spatial scales that will unravel geologic sequence stratigraphy through time. The final report of the mission concept provides details on the spacecraft, orbital design, technological maturity, results from systems-level integration studies, and costs. This article is intended to expand upon the science motivation for the mission, the measurement goals and objectives, and the instrument trade space that was examined in detail during the concept study.

The Planetary Science Journal↗

USGS2023

Assessing environmental oil spill based on fluorescence images of water samples and deep learning

Measuring oil concentration in the aquatic environment is essential for determining the potential exposure, risk, or injury for oil spill response and natural resource damage assessment. Conventional analytical chemistry methods require samples to be collected in the field, shipped, and processed in the laboratory, which is also rather time-consuming, laborious, and costly. For rapid field response immediately after a spill, there is a need to estimate oil concentration in near real time. To make the oil analysis more portable, fast, and cost effective, we developed a plug-and-play device and a deep learning model to assess oil levels in water using fluorescent images of water samples. We constructed a 3D-printed device to collect fluorescent images of solvent-extracted water samples using an iPhone. We prepared approximately 1,300 samples of oil at different concentrations to train and test the deep learning model. The model comprises a convolutional neural network and a novel module of histogram bottleneck block with an attention mechanism to exploit the spectral features found in low-contrast images. This model predicts the oil concentration in weight per volume based on fluorescence image. We devised a confidence interval estimator by combining gradient boosting and polymodal regressor to provide a confidence assessment of our results. Our model achieved sufficient accuracy to predict oil levels for most environmental applications. We plan to improve the device and iPhone application as a near-real-time tool for oil spill responders to measure oil in water.

Journal of Environmental Informatics↗

USGS2005

Estimating hydrodynamic roughness in a wave-dominated environment with a high-resolution acoustic Doppler profiler

Hydrodynamic roughness is a critical parameter for characterizing bottom drag in boundary layers, and it varies both spatially and temporally due to variation in grain size, bedforms, and saltating sediment. In this paper we investigate temporal variability in hydrodynamic roughness using velocity profiles in the bottom boundary layer measured with a high-resolution acoustic Doppler profiler (PCADP). The data were collected on the ebb-tidal delta off Grays Harbor, Washington, in a mean water depth of 9 m. Significant wave height ranged from 0.5 to 3 m. Bottom roughness has rarely been determined from hydrodynamic measurements under conditions such as these, where energetic waves and medium-to-fine sand produce small bedforms. Friction velocity due to current u*c and apparent bottom roughness z0a were determined from the PCADP burst mean velocity profiles using the law of the wall. Bottom roughness kB was estimated by applying the Grant-Madsen model for wave-current interaction iteratively until the model u*c converged with values determined from the data. The resulting kB values ranged over 3 orders of magnitude (10-1 to 10-4 m) and varied inversely with wave orbital diameter. This range of kB influences predicted bottom shear stress considerably, suggesting that the use of time-varying bottom roughness could significantly improve the accuracy of sediment transport models. Bedform height was estimated from kB and is consistent with both ripple heights predicted by empirical models and bedforms in sonar images collected during the experiment. Copyright 2005 by the American Geophysical Union.

Journal of Geophysical Research C: Oceans↗

USGS2018

Filtering of cyclic period infiltration in a layered vadose zone: 1. Approximation of damping and time lags

Core Ideas We describe an approximation for filtering of periodic infiltration in layered soil. Transitions in soil‐water properties between soil layers affect the filtering. Errors are smaller in soils where changes in soil‐water properties are small. Infiltration and downward percolation of water in the vadose zone are important processes that can define the availability of water resources. We present an approach that provides insight into how periodic infiltration forcings at the land surface filter in a layered vadose zone in terms of changes in the timing and magnitude of hydrologic responses. To represent geologically realistic systems, we used vertical sequences of one‐dimensional periodic solutions, where each solution represents a single soil in a layered profile. The overall approach is based on a linearized Richards equation and assumes that the effects on flow of continuous pressure head changes at soil interfaces are negligible. We evaluated the limit of these approximations by comparison with results from the numerical model HYDRUS‐1D, which uses the full Richards equation. We compared (i) the depth at which flux variations became steady, and (ii) the travel time of wetting fronts to reach a depth of 3 m. The solution was reasonably accurate (error less than a factor of 2) for infiltration cycles with periods from 30 to 365 d and for fluxes common in arid and semiarid environments (0–2 mm d −1 ). Lag times between a surface forcing and response at any depth were accurate (error less than a factor of 1.1). The approximation generally provided consistent estimates of the damping and time lag, such that it overestimated the depths where fluxes were steady and underestimated the time for a forcing to reach a specific depth.

Vadose Zone Journal↗

USGS2019

Measurement of sounds emitted by certain high-resolution geophysical survey systems

Scientific questions regarding the impact of anthropomorphic noise in the marine environment have resulted in an increasing number of regulatory requirements and precautionary mitigation strategies to reduce the risks associated with high-resolution marine geophysical surveys performed in waters subjected to government jurisdiction. An example of regulatory frameworks includes the Marine Mammal Protection Act in the United States and the Marine Strategy Framework Directive 2008/56/EC in the European Union. Regulatory compliance often requires an assessment of the potential ecological risks before initiating a marine geophysical survey. However, the acoustic source data needed to estimate the risk associated with the operation of a given high-resolution survey system are frequently lacking. A comprehensive measurement program was performed to quantify the characteristics of sounds radiated by a variety of commercial marine geophysical survey systems, including boomers, sparkers, airguns, chirp sub-bottom profilers, sidescan sonars, and swath-bathymetric sonars [Crocker and Fratantonio, “Characteristics of high-frequency sounds emitted during high-resolution marine geophysical surveys,” Naval Undersea Warfare Center, Newport, RI, USA, NUWC-NPT Tech. Rep. 12, 203, 2016]. Calibrated acoustic source data, including source levels, source spectra, and beam patterns, were acquired for a total of 18 different marine geophysical survey systems. The data support modeling to estimate the potential ecological impacts resulting from the operation of certain high-resolution marine geophysical survey systems.

IEEE Journal of Oceanic Engineering↗

USGS2023

Accounting for spatiotemporal sampling variation in joint species distribution models

Estimating relative abundance is critical for informing conservation and management efforts and for making inferences about the effects of environmental change on populations. Freshwater fisheries span large geographic regions, occupy diverse habitats and consist of varying species assemblages. Monitoring schemes used to sample these diverse populations often result in populations being sampled at different times and under different environmental conditions. Varying sampling conditions can bias estimates of abundance when compared across time, location and species, and properly accounting for these biases is critical for making inferences. We develop a joint species distribution model (JSDM) that accounts for varying sampling conditions due to the environment and time of sampling when estimating relative abundance. The novelty of our JSDM is that we explicitly model sampling effort as the product of known quantities based on time and gear type and an unknown functional relationship to capture seasonal variation in species life history. We use the model to study relative abundance of six freshwater fish species across the state of Minnesota, USA. Our model enables estimates of relative abundance to be compared both within and across species and lakes, and captures the inconsistent sampling present in the data. We discuss how gear type, water temperature and day of the year impact catchability for each species at the lake level and throughout a year. We compare our estimates of relative abundance to those obtained from a model that assumes constant catchability to highlight important differences within and across lakes and species. Synthesis and applications : Our method illustrates that assumptions relating indices of abundance to observed catch data can greatly impact model inferences derived from JSDMs. Specifically, not accounting for varying sampling conditions can bias inference of relative abundance, restricting our ability to detect responses to management interventions and environmental change. While our focus is on freshwater fisheries, this model architecture can be adopted to other systems where catchability may vary as a function of space, time and species.

Journal of Applied Ecology↗

USGS2014

Fathead minnow and bluegill sunfish life-stage responses to 17β-estradiol exposure in outdoor mesocosms

Developmental and reproductive effects of 17β-estradiol (E2) exposure on two generations of fathead minnows and one generation of bluegill sunfish were assessed. Fish were exposed to E2 for six continuous weeks in outdoor mesocosms simulating natural lake environments. First generation fish were exposed while sexually mature. Second generation fathead minnows were exposed either during early development, sexual maturity, or both stages. Multiple endpoints were measured to assess effects of E2 exposure on fecundity and fish health and development. Plasma vitellogenin concentrations were highly variable in all fish. Differences in egg production timing for both species indicate differences in fecundity between females exposed to E2 and controls. First generation fathead minnows exposed to E2 had lower body condition factors and reduced secondary sexual characteristic expression by males. Only a difference in relative liver weight was observed in second generation fathead minnows. First generation bluegill males exposed to E2 had significantly smaller testes compared to controls. Although fish response was highly variable, results indicate that exposure to E2 at environmentally relevant concentrations affect fathead minnow and bluegill sunfish health and development, which may have implications for the health and sustainability of fish populations. Furthermore, exposure timing and environmental factors affect fish response to E2 exposure.

Journal of the American Water Resources Associatio↗

USGS2017

Sediment transport in the presence of large reef bottom roughness

The presence of large bottom roughness, such as that formed by benthic organisms on coral reef flats, has important implications for the size, concentration, and transport of suspended sediment in coastal environments. A 3 week field study was conducted in approximately 1.5 m water depth on the reef flat at Ningaloo Reef, Western Australia, to quantify the cross-reef hydrodynamics and suspended sediment dynamics over the large bottom roughness (∼20–40 cm) at the site. A logarithmic mean current profile consistently developed above the height of the roughness; however, the flow was substantially reduced below the height of the roughness (canopy region). Shear velocities inferred from the logarithmic profile and Reynolds stresses measured at the top of the roughness, which are traditionally used in predictive sediment transport formulations, were similar but much larger than that required to suspend the relatively coarse sediment present at the bed. Importantly, these stresses did not represent the stresses imparted on the sediment measured in suspension and are therefore not relevant to the description of suspended sediment transport in systems with large bottom roughness. Estimates of the bed shear stresses that accounted for the reduced near-bed flow in the presence of large roughness vastly improved the relationship between the predicted and observed grain sizes that were in suspension. Thus, the impact of roughness, not only on the overlying flow but also on bed stresses, must be accounted for to accurately estimate suspended sediment transport in regions with large bottom roughness, a common feature of many shallow coastal ecosystems.

Journal of Geophysical Research C: Oceans↗

USGS2011

Limnogeology in Brazil's "forgotten wilderness": A synthesis from the large floodplain lakes of the Pantanal

Sediment records from floodplain lakes have a large and commonly untapped potential for inferring wetland response to global change. The Brazilian Pantanal is a vast, seasonally inundated savanna floodplain system controlled by the flood pulse of the Upper Paraguay River. Little is known, however, about how floodplain lakes within the Pantanal act as sedimentary basins, or what influence hydroclimatic variables exert on limnogeological processes. This knowledge gap was addressed through an actualistic analysis of three large, shallow (<5 m) floodplain lakes in the western Pantanal: Lagoa Gaíva, Lagoa Mandioré and Baia Vermelha. The lakes are dilute (CO3 2- > Si 4+ > Ca 2+ ), mildly alkaline, freshwater systems, the chemistries and morphometrics of which evolve with seasonal flooding. Lake sills are bathymetric shoals marked by siliciclastic fans and marsh vegetation. Flows at the sills likely undergo seasonal reversals with the changing stage of the Upper Paraguay River. Deposition in deeper waters, typically encountered in proximity to margin-coincident topography, is dominated by reduced silty-clays with abundant siliceous microfossils and organic matter. Stable isotopes of carbon and nitrogen, plus hydrogen index measured on bulk organic matter, suggest that contributions from algae (including cyanobacteria) and other C3-vegetation dominate in these environments. The presence of lotic sponge spicules, together with patterns of terrigenous sand deposition and geochemical indicators of productivity, points to the importance of the flood pulse for sediment and nutrient delivery to the lakes. Flood-pulse plumes, waves and bioturbation likewise affect the continuity of sedimentation. Short-lived radioisotopes indicate rates of 0.11-0.24 cm year -1 at sites of uninterrupted deposition. A conceptual facies model, developed from insights gained from modern seasonal processes, can be used to predict limnogeological change when the lakes become isolated on the floodplain or during intervals associated with a strengthened flood pulse. Amplification of the seasonal cycle over longer time scales suggests carbonate, sandy lowstand fan and terrestrial organic matter deposition during arid periods, whereas deposition of lotic sponges, mixed aquatic organic matter, and highstand deltas characterizes wet intervals. The results hold substantial value for interpreting paleolimnological records from floodplain lakes linked to large tropical rivers with annual flooding cycles.

Bahia Vermelha, Brazilian Pantanal, Lagoa Gaiva, L↗