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At least 325 records · Page 18Linked to original sources

Evaluating mixed samples as a source of error in non-invasive genetic studies using microsatellites

The use of noninvasive genetic sampling (NGS) for surveying wild populations is increasing rapidly. Currently, only a limited number of studies have evaluated potential biases associated with NGS. This paper evaluates the potential errors associated with analysing mixed samples drawn from multiple animals. Most NGS studies assume that mixed samples will be identified and removed during the genotyping process. We evaluated this assumption by creating 128 mixed samples of extracted DNA from brown bear (Ursus arctos) hair samples. These mixed samples were genotyped and screened for errors at six microsatellite loci according to protocols consistent with those used in other NGS studies. Five mixed samples produced acceptable genotypes after the first screening. However, all mixed samples produced multiple alleles at one or more loci, amplified as only one of the source samples, or yielded inconsistent electropherograms by the final stage of the error-checking process. These processes could potentially reduce the number of individuals observed in NGS studies, but errors should be conservative within demographic estimates. Researchers should be aware of the potential for mixed samples and carefully design gel analysis criteria and error checking protocols to detect mixed samples.

Molecular Ecology↗

Linking landscape characteristics to local grizzly bear abundance using multiple detection methods in a hierarchical model

Few studies link habitat to grizzly bear Ursus arctos abundance and these have not accounted for the variation in detection or spatial autocorrelation. We collected and genotyped bear hair in and around Glacier National Park in northwestern Montana during the summer of 2000. We developed a hierarchical Markov chain Monte Carlo model that extends the existing occupancy and count models by accounting for (1) spatially explicit variables that we hypothesized might influence abundance; (2) separate sub-models of detection probability for two distinct sampling methods (hair traps and rub trees) targeting different segments of the population; (3) covariates to explain variation in each sub-model of detection; (4) a conditional autoregressive term to account for spatial autocorrelation; (5) weights to identify most important variables. Road density and per cent mesic habitat best explained variation in female grizzly bear abundance; spatial autocorrelation was not supported. More female bears were predicted in places with lower road density and with more mesic habitat. Detection rates of females increased with rub tree sampling effort. Road density best explained variation in male grizzly bear abundance and spatial autocorrelation was supported. More male bears were predicted in areas of low road density. Detection rates of males increased with rub tree and hair trap sampling effort and decreased over the sampling period. We provide a new method to (1) incorporate multiple detection methods into hierarchical models of abundance; (2) determine whether spatial autocorrelation should be included in final models. Our results suggest that the influence of landscape variables is consistent between habitat selection and abundance in this system.

Animal Conservation↗

Body size and lean mass of brown bears across and within four diverse ecosystems

Variation in body size across populations of brown bears (Ursus arctos) is largely a function of the availability and quality of nutritional resources while plasticity within populations reflects utilized niche width with implications for population resiliency. We assessed skull size, body length, and lean mass of adult female and male brown bears in four Alaskan study areas that differed in climate, primary food resources, population density, and harvest regime. Full body-frame size, as evidenced by asymptotic skull size and body length, was achieved by 8 to 14 years of age across populations and sexes. Lean body mass of both sexes continued to increase throughout their life. Differences between populations existed for all morphological measures in both sexes, bears in ecosystems with abundant salmon were generally larger. Within all populations, broad variation was seen in body size measures of adults with females displaying roughly a 2-fold difference in lean mass and males showing a 3- to 4-fold difference. The high level of intraspecific variation seen across and within populations suggests the presence of multiple life-history strategies and niche variation relative to resource partitioning, risk tolerance or aversion, and competition. Further, this level of variation indicates broad potential to adapt to changes within a given ecosystem and across the species’ range.

Alaska↗

Bear diets and human-bear conflicts: Insights from isotopic ecology

Bears, Ursidae, are considered omnivores, except for giant pandas Ailuropoda melanoleuca and polar bears Ursus maritimus. However, omnivory includes a wide range of dietary variation and trophic positions, making bear dietary ecology unclear. We inferred bear trophic positions from δ 15 N (‰) values and examined their correlation with diets reported in the literature, including frequency of human–bear conflicts (livestock predation and crop damage incidents). Overall, 15N signatures were consistent with diet estimates. Bear species with higher 15 N signatures differed more from each other, including cases of large regional intraspecific variance, than bear species with lower 15 N signatures. Bear trophic position and frequency of reports of human–bear conflicts were uncorrelated, suggesting that livestock predation by bears is an opportunistic behaviour rather than a response to food availability dynamics.

Mammal Review↗

Multiple estimates of effective population size for monitoring a long-lived vertebrate: An application to Yellowstone grizzly bears

Effective population size ( N e ) is a key parameter for monitoring the genetic health of threatened populations because it reflects a population's evolutionary potential and risk of extinction due to genetic stochasticity. However, its application to wildlife monitoring has been limited because it is difficult to measure in natural populations. The isolated and well-studied population of grizzly bears ( Ursus arctos ) in the Greater Yellowstone Ecosystem provides a rare opportunity to examine the usefulness of different N e estimators for monitoring. We genotyped 729 Yellowstone grizzly bears using 20 microsatellites and applied three single-sample estimators to examine contemporary trends in generation interval (GI), effective number of breeders ( N b ) and N e during 1982–2007. We also used multisample methods to estimate variance ( N eV ) and inbreeding N e ( N eI ). Single-sample estimates revealed positive trajectories, with over a fourfold increase in N e (≈100 to 450) and near doubling of the GI (≈8 to 14) from the 1980s to 2000s. N eV (240–319) and N eI (256) were comparable with the harmonic mean single-sample N e (213) over the time period. Reanalysing historical data, we found N eV increased from ≈80 in the 1910s–1960s to ≈280 in the contemporary population. The estimated ratio of effective to total census size ( N e /N c ) was stable and high (0.42–0.66) compared to previous brown bear studies. These results support independent demographic evidence for Yellowstone grizzly bear population growth since the 1980s. They further demonstrate how genetic monitoring of N e can complement demographic-based monitoring of N c and vital rates, providing a valuable tool for wildlife managers.

Idaho, Montana, Wyoming↗

Ancient bears provide insights into Pleistocene ice age refugia in Southeast Alaska

During the Late Pleistocene, major parts of North America were periodically covered by ice sheets. However, there are still questions about whether ice-free refugia were present in the Alexander Archipelago along the Southeast (SE) Alaska coast during the last glacial maximum (LGM). Numerous subfossils have been recovered from caves in SE Alaska, including American black ( Ursus americanus ) and brown ( U. arctos ) bears, which today are found in the Alexander Archipelago but are genetically distinct from mainland bear populations. Hence, these bear species offer an ideal system to investigate long-term occupation, potential refugial survival and lineage turnover. Here, we present genetic analyses based on 99 new complete mitochondrial genomes from ancient and modern brown and black bears spanning the last ~45,000 years. Black bears form two SE Alaskan subclades, one preglacial and another postglacial, that diverged >100,000 years ago. All postglacial ancient brown bears are closely related to modern brown bears in the archipelago, while a single preglacial brown bear is found in a distantly related clade. A hiatus in the bear subfossil record around the LGM and the deep split of their pre- and postglacial subclades fail to support a hypothesis of continuous occupancy in SE Alaska throughout the LGM for either species. Our results are consistent with an absence of refugia along the SE Alaska coast, but indicate that vegetation quickly expanded after deglaciation, allowing bears to recolonize the area after a short-lived LGM peak.

Alaska↗

Remote biopsy darting and marking of polar bears

Remote biopsy darting of polar bears ( Ursus maritimus ) is less invasive and time intensive than physical capture and is therefore useful when capture is challenging or unsafe. We worked with two manufacturers to develop a combination biopsy and marking dart for use on polar bears. We had an 80% success rate of collecting a tissue sample with a single biopsy dart and collected tissue samples from 143 polar bears on land, in water, and on sea ice. Dye marks ensured that 96% of the bears were not resampled during the same sampling period, and we recovered 96% of the darts fired. Biopsy heads with 5 mm diameters collected an average of 0.12 g of fur, tissue, and subcutaneous adipose tissue, while biopsy heads with 7 mm diameters collected an average of 0.32 g. Tissue samples were 99.3% successful (142 of 143 samples) in providing a genetic and sex identification of individuals. We had a 64% success rate collecting adipose tissue and we successfully examined fatty acid signatures in all adipose samples. Adipose lipid content values were lower compared to values from immobilized or harvested polar bears, indicating that our method was not suitable for quantifying adipose lipid content.

Marine Mammal Science↗

Energetic costs of aquatic locomotion in a subadult polar bear

Most marine mammals rely on swimming as their primary form of locomotion. These animals have evolved specialized morphologies, physiologies, and behaviors that have enabled them to efficiently move through an aquatic environment (Williams 1999 ). Such adaptations include body streamlining, modified plantar surfaces for propulsion, and abilities to remain submerged for extended durations (Williams 1989 ). As a result of these adaptations, many marine mammal species exhibit minimal increases in metabolism at routine swim speeds relative to resting rates (Williams et al . 1992 , 2017 ; Yazdi et al . 1999 ). Contrary to most marine mammals, polar bears ( Ursus maritimus ) rely on walking as their primary form of locomotion. As a consequence, they exhibit little evidence of body streamlining or abilities to remain submerged for extended durations. The longest dive recorded for a polar bear is 3 min and 10 s (Stirling and van Meurs 2015 ), a relatively brief period compared to other marine mammals (Ponganis 2015 ). Nevertheless, polar bears do exhibit large forepaws (DeMaster and Stirling 1981 ), lower and flatter heads (Slater et al . 2010 ), and more dense forelimb bones (Wall 1983 ) relative to other bear species, potentially as adaptations for swimming. Polar bears further exhibit some distinct physiological and behavioral adaptations from other bear species likely as a consequence of their marine existence (Pagano et al . 2018 a ).

Marine Mammal Science↗

Summer declines in activity and body temperature offer polar bears limited energy savings

Polar bears ( Ursus maritimus ) summer on the sea ice or, where it melts, on shore. Although the physiology of “ice” bears in summer is unknown, “shore” bears purportedly minimize energy losses by entering a hibernation-like state when deprived of food. Such a strategy could partially compensate for the loss of on-ice foraging opportunities caused by climate change. However, here we report gradual, moderate declines in activity and body temperature of both shore and ice bears in summer, resembling energy expenditures typical of fasting, nonhibernating mammals. Also, we found that to avoid unsustainable heat loss while swimming, bears employed unusual heterothermy of the body core. Thus, although well adapted to seasonal ice melt, polar bears appear susceptible to deleterious declines in body condition during the lengthening period of summer food deprivation.

Science↗

High-energy, high-fat lifestyle challenges an Arctic apex predator, the polar bear

Regional declines in polar bear ( Ursus maritimus ) populations have been attributed to changing sea ice conditions, but with limited information on the causative mechanisms. By simultaneously measuring field metabolic rates, daily activity patterns, body condition, and foraging success of polar bears moving on the spring sea ice, we found that high metabolic rates (1.6 times greater than previously assumed) coupled with low intake of fat-rich marine mammal prey resulted in an energy deficit for more than half of the bears examined. Activity and movement on the sea ice strongly influenced metabolic demands. Consequently, increases in mobility resulting from ongoing and forecasted declines in and fragmentation of sea ice are likely to increase energy demands and may be an important factor explaining observed declines in body condition and survival.

Science↗

Variation in energetic balance among free-ranging polar bears during the spring mating and foraging season

Large carnivores are capable of consuming substantial biomasses that can significantly alter their body mass and condition over short periods. Here we examine the intra-seasonal variation of polar bear ( Ursus maritimus Phipps, 1774) body mass, energy intake, and condition in the spring from two subpopulations. We evaluate the biological and temporal factors that may have driven changes in body mass of 31 individuals captured and recaptured over 2–39 days and assess whether these changes influenced their estimated condition. Body mass changed by –61 to 33 kg ( = –2 kg) with bears exhibiting increases in mass with increasing age and decreases with greater initial mass. On average, estimated intake was 57 MJ/day. Estimated daily mass-specific body mass changes exhibited greater variation relative to previous measures in polar bears or brown bears ( U. arctos Linnaeus, 1758). Yet, across all bears, measures of condition remained similar between captures. The marked variation in mass gains or losses highlights the varying behavioral and physiological limitations that influence foraging success within this apex carnivore during a season when two key life history events converge wherein feeding is often reduced during mating activities despite the importance of the spring hyperphagia period to long-term energy balance.

Lancaster Sound, southern Beaufort Sea↗

Reply to the discussion by Pilfold “Polar bear mass change confirms hyperphagia follows ringed seal whelping”

The spring is a critical period when polar bears ( Ursus maritimus Phipps, 1774) are thought to have peak access to seals and acquire the majority of their annual energy requirements during a period of hyperphagia. Pagano et al. (Pagano A.M., Atkinson S.N., and Archer L.C. 2025. Arctic Science.11:1-14. doi:10.1139/as-2024-0051) examined the intra-seasonal changes in body mass of 31 polar bears on the spring sea ice and found polar bears exhibited a feast or famine lifestyle. A lack of a relationship between changes in body mass and recapture date suggested that many bears had not entered their primary period of hyperphagia. Pilfold extended our discussion to conclude that our data show polar bear hyperphagia begins after the period of ringed seal ( Pusa hispida Schreber, 1775) whelping, and discusses this in relation to previous work on the timing of polar bear seal kills. Here, we reassess whether our data provide information on the timing of polar bear hyperphagia. We find no relationships in our data to conclude when polar bear hyperphagia begins. Instead, our data highlight the conflicting pressures individuals face between the spring breeding season, when time spent foraging is often reduced to engage in mating behavior, and the spring hyperphagia period, when the bulk of annual energy requirements are met.

Arctic Science↗

Comparing movement patterns of satellite-tagged male and female polar bears

Satellite radiotelemetry has provided great insights into the movements and behaviors of polar bears ( Ursus maritimus ). The diameter of the neck of adult male polar bears exceeds that of their head, however, and radio collars slip off. This has limited collection of movement information to that from radio-collared females. To overcome this difficulty and gather information about their movements, we surgically implanted satellite radio transmitters into 7 male polar bears during 1996 and 1997. We compared movements of implanted males with those of 104 adult females radio-collared between 1985 and 1995. Transmitters were implanted under the skin on the midline of the top of the neck and were equipped with percutaneous antennae. Implanted transmitters operated for up to 161 days providing 3217 satellite relocations. While transmitting, radios implanted in males provided a larger proportion of the highest quality category of position fixes than was obtained from radio-collared females. However, all implanted radios ceased transmitting before reaching their projected life-span. The abrupt termination of transmission from implanted radios suggested mechanical rather than electronic failure. Mean rates of short-term movement for males (1.18 km/h) were lower than for solitary females, females with cubs, and females with yearlings (1.70, 1.84, and 1.95 km/h, respectively). Net geographic movements from the beginning to the end of each month were comparable for males (mean = 135 km) and females (mean = 114, 152, and 168 km). Mean azimuths of these net movements also appeared to be similar. Monthly activity-area sizes for males (mean = 8541 km 2 ) were comparable to those for females (mean = 3698, 9397, and 10 585 km 2 ) during the time period of comparison. In contrast to the other movement measures, males traveled longer mean distances (387 km) each month than did females (217, 289, and 302 km). Movements of males, it appears, were more directed than those of females, but males confined their travels to similar-sized areas.

Alaska, Northwest Territories↗

Use of sulfur and nitrogen stable isotopes to determine the importance of whitebark pine nuts to Yellowstone grizzly bears

Whitebark pine ( Pinus albicaulis ) is a masting species that produces relatively large, fat- and protein-rich nuts that are consumed by grizzly bears ( Ursus arctos horribilis ). Trees produce abundant nut crops in some years and poor crops in other years. Grizzly bear survival in the Greater Yellowstone Ecosystem is strongly linked to variation in pine-nut availability. Because whitebark pine trees are infected with blister rust ( Cronartium ribicola ), an exotic fungus that has killed the species throughout much of its range in the northern Rocky Mountains, we used stable isotopes to quantify the importance of this food resource to Yellowstone grizzly bears while healthy populations of the trees still exist. Whitebark pine nuts have a sulfur-isotope signature (9.2 ± 1.3‰ (mean ± 1 SD)) that is distinctly different from those of all other grizzly bear foods (ranging from 1.9 ± 1.7‰ for all other plants to 3.1 ± 2.6‰ for ungulates). Feeding trials with captive grizzly bears were used to develop relationships between dietary sulfur-, carbon-, and nitrogen-isotope signatures and those of bear plasma. The sulfur and nitrogen relationships were used to estimate the importance of pine nuts to free-ranging grizzly bears from blood and hair samples collected between 1994 and 2001. During years of poor pine-nut availability, 72% of the bears made minimal use of pine nuts. During years of abundant cone availability, 8 ± 10% of the bears made minimal use of pine nuts, while 67 ± 19% derived over 51% of their assimilated sulfur and nitrogen (i.e., protein) from pine nuts. Pine nuts and meat are two critically important food resources for Yellowstone grizzly bears.

Wyoming↗

Use of naturally occurring mercury to determine the importance of cutthroat trout to Yellowstone grizzly bears

Spawning cutthroat trout ( Oncorhynchus clarki (Richardson, 1836)) are a potentially important food resource for grizzly bears ( Ursus arctos horribilis Ord, 1815) in the Greater Yellowstone Ecosystem. We developed a method to estimate the amount of cutthroat trout ingested by grizzly bears living in the Yellowstone Lake area. The method utilized ( i ) the relatively high, naturally occurring concentration of mercury in Yellowstone Lake cutthroat trout (508 ± 93 ppb) and its virtual absence in all other bear foods ( 6 ppb), ( ii ) hair snares to remotely collect hair from bears visiting spawning cutthroat trout streams between 1997 and 2000, ( iii ) DNA analyses to identify the individual and sex of grizzly bears leaving a hair sample, ( iv ) feeding trials with captive bears to develop relationships between fish and mercury intake and hair mercury concentrations, and ( v ) mercury analyses of hair collected from wild bears to estimate the amount of trout consumed by each bear. Male grizzly bears consumed an average of 5 times more trout/kg bear than did female grizzly bears. Estimated cutthroat trout intake per year by the grizzly bear population was only a small fraction of that estimated by previous investigators, and males consumed 92% of all trout ingested by grizzly bears.

Wyoming, Montana, Idaho↗

Similarities in acute phase protein response during hibernation in black bears and major depression in humans: A response to underlying metabolic depression?

This study investigated the effects of hibernation with mild hypothermia and the stress of captivity on levels of six acute-phase proteins (APPs) in serial samples of serum from 11 wild and 6 captive black bears (Ursus americanus Pallas, 1780) during active and hibernating states. We hypothesize that during hibernation with mild hypothermia, bears would show an APP response similar to that observed in major depression. Enzyme-linked immunoabsorbent assay was used to measure alpha2-macroglobulin and C-reactive protein, and a nephelometer to measure alpha1-antitrypsin, haptoglobin, ceruloplasmin, and transferrin. Levels of all other proteins except ceruloplasmin were significantly elevated during hibernation in both wild and captive bears at the p < 0.05 to p < 0.001 level. Alpha 2-macroglobulin and C-reactive-protein levels were increased in captive versus wild bears in both active and hibernating states at the p < 0.01 to p < 0.0001 level. During hibernation with mild hypothermia, black bears do not show immunosuppression, but show an increased APP response similar to that in patients with major depression. This APP response is explained as an adaptive response to the underlying metabolic depression in both conditions. Metabolic depression in hibernating bears is suggested as a natural model for research to explain the neurobiology of depression.

Canadian Journal of Zoology↗

Demography and decline of the Mentasta caribou herd, Alaska

We evaluated population trends in the Mentasta caribou ( Rangifer tarandus (L., 1758)) herd in Wrangell – St. Elias National Park and Preserve, Alaska, from 1990 to 1997 and determined factors contributing to its decline. We postulated that predation-related mortality of adult females and juveniles was the proximate cause of the decline, and that survival of juvenile caribou reflected interactions with winter severity, calving distribution, timing of births, density of caribou, and physical condition of neonates at birth. The population declined at its greatest rate from 1990 to 1993 ( r = –0.32) and at a lower rate from 1994 to 1997 ( r = –0.09). Recruitment (number of calves/100 females during September) averaged 4/100 during the rapid population decline from 1990 to 1993 and 13/100 from 1994 to 1997. Parturition rate of adult females ranged from 65% to 97%. Survival of adult females and juveniles ranged from 0.77 to 0.86 and from 0.00 to 0.22, respectively. Approximately 43%, 59%, and 79% of all juvenile mortality occurred by 1, 2, and 4 weeks of age, respectively. We confirmed predation-related mortality as the primary proximate cause of population decline, with gray wolves ( Canis lupus L., 1758), bears (species of the genus Ursus L., 1758), and other predators accounting for 57%, 38%, and 5%, respectively, of all juvenile mortality, and bears causing disproportionate mortality among 0- to 1-week-old neonates. We supported the hypotheses that timing of birth and habitat conditions at the birth site, particularly mottled snow patterns, affected vulnerability and survival of neonates, and birth mass affected survival of juveniles through summer. We speculate that the population will continue to decline before reaching a low-density equilibrium that is sustained by density-dependent changes in the functional responses of predators.

Alaska↗

Variation in winter diet of southern Beaufort Sea polar bears inferred from stable isotope analysis

Ringed seals ( Phoca hispida Schreber, 1775 = Pusa hispida (Schreber, 1775)) and bearded seals ( Erignathus barbatus (Erxleben, 1777)) represent the majority of the polar bear ( Ursus maritimus Phipps, 1774) annual diet. However, remains of lower trophic level bowhead whales ( Balaena mysticetus L., 1758) are available in the southern Beaufort Sea and their dietary contribution to polar bears has been unknown. We used stable isotope ( 13 C/ 12 C, &delta; 13 C, 15 N/ 14 N, and &delta; 15 N) analysis to determine the diet composition of polar bears sampled along Alaska&rsquo;s Beaufort Sea coast in March and April 2003 and 2004. The mean &delta; 15 N values of polar bear blood cells were 19.5&permil; (SD = 0.7&permil;) in 2003 and 19.9&permil; (SD = 0.7&permil;) in 2004. Mixing models indicated bowhead whales composed 11%&ndash;26% (95% CI) of the diets of sampled polar bears in 2003, and 0%&ndash;14% (95% CI) in 2004. This suggests significant variability in the proportion of lower trophic level prey in polar bear diets among individuals and between years. Polar bears depend on sea ice for hunting seals, and the temporal and spatial availabilities of sea ice are projected to decline. Consumption of low trophic level foods documented here suggests bears may increasingly scavenge such foods in the future.

Canadian Journal of Zoology↗