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U.S. Geological Survey Toxic Substances Hydrology Program: Proceedings of the technical meeting, Charleston, South Carolina, March 8-12, 1999: Volume 2 (Part B)

This report contains papers presented at the seventh Technical Meeting of the U.S. Geological Survey (USGS), Toxic Substances Hydrology (Toxics) Program. The meeting was held March 8-12, 1999, in Charleston, South Carolina. Toxics Program Technical Meetings are held periodically to provide a forum for presentation and discussion of results of recent research activities. The objectives of these meetings are to: Present recent research results to essential stakeholders, Encourage synthesis and integrated interpretations among scientists with different expertise who are working on a contamination issue, and Promote exchange of ideas among scientists working on different projects and issues within the Toxics Program. The Proceedings is published in three volumes. Volume 1 contains papers that report on results of research on contamination from hard-rock mining. Results include research on contamination from hard rock mining in arid southwest alluvial basins, research on hard rock mining in mountainous terrain, and progress from the USGS Abandoned Mine Lands Initiative. This Initiative is designed to develop a watershed-based approach to characterize and remediate contamination from abandoned mine lands and transfer technologies to Federal land management agencies and stakeholders. Volume 2 contains papers on contamination of hydrologic systems and related ecosystems. The papers discuss research on the response of estuarine ecosystems to contamination from human activities. They include research on San Francisco Bay; mercury contamination of aquatic ecosystems; and investigation of the occurrence, distribution, and fate of agricultural chemicals in the Mississippi River Basin. This volume also contains results on development and reconnaissance testing of new methods to detect emerging contaminants in environmental samples. Volume 3 contains papers on subsurface contamination from point sources. The papers discuss research on: hydrocarbons and fuel oxygenates at gasoline release sites; ground-water contamination by crude oil; complex contaminant mixtures from treated wastewater discharges; waste disposal and subsurface transport of contaminants in arid environments; ground water and surface water affected by municipal landfill leachate; natural attenuation of chlorinated solvents; and characterizing flow and transport in fractured rock aquifers. In all, the more than 175 papers contained in this proceedings reflect the contributions of more than 350 scientists who are co-authors. These scientists are from across the USGS, as well as from universities, other Federal and State agencies, and industry.

Water-Resources Investigations Report

U.S. Geological Survey Toxic Substances Hydrology Program: Proceedings of the technical meeting, Charleston, South Carolina, March 8-12, 1999: Volume 3 (Part C)

This report contains papers presented at the seventh Technical Meeting of the U.S. Geological Survey (USGS), Toxic Substances Hydrology (Toxics) Program. The meeting was held March 8-12, 1999, in Charleston, South Carolina. Toxics Program Technical Meetings are held periodically to provide a forum for presentation and discussion of results of recent research activities. The objectives of these meetings are to: Present recent research results to essential stakeholders, Encourage synthesis and integrated interpretations among scientists with different expertise who are working on a contamination issue, and Promote exchange of ideas among scientists working on different projects and issues within the Toxics Program. The Proceedings is published in three volumes. Volume 1 contains papers that report on results of research on contamination from hard-rock mining. Results include research on contamination from hard rock mining in arid southwest alluvial basins, research on hard rock mining in mountainous terrain, and progress from the USGS Abandoned Mine Lands Initiative. This Initiative is designed to develop a watershed-based approach to characterize and remediate contamination from abandoned mine lands and transfer technologies to Federal land management agencies and stakeholders. Volume 2 contains papers on contamination of hydrologic systems and related ecosystems. The papers discuss research on the response of estuarine ecosystems to contamination from human activities. They include research on San Francisco Bay; mercury contamination of aquatic ecosystems; and investigation of the occurrence, distribution, and fate of agricultural chemicals in the Mississippi River Basin. This volume also contains results on development and reconnaissance testing of new methods to detect emerging contaminants in environmental samples. Volume 3 contains papers on subsurface contamination from point sources. The papers discuss research on: hydrocarbons and fuel oxygenates at gasoline release sites; ground-water contamination by crude oil; complex contaminant mixtures from treated wastewater discharges; waste disposal and subsurface transport of contaminants in arid environments; ground water and surface water affected by municipal landfill leachate; natural attenuation of chlorinated solvents; and characterizing flow and transport in fractured rock aquifers. In all, the more than 175 papers contained in this proceedings reflect the contributions of more than 350 scientists who are co-authors. These scientists are from across the USGS, as well as from universities, other Federal and State agencies, and industry.

Water-Resources Investigations Report

Void-Filled SRTM Digital Elevation Model of Afghanistan

EXPLANATION The purpose of this data set is to provide a single consistent elevation model to be used for national scale mapping, GIS, remote sensing applications, and natural resource assessments for Afghanistan's reconstruction. For 11 days in February of 2000, the National Aeronautics and Space Administration (NASA), the National Geospatial-Intelligence Agency ian Space Agency (ASI) flew X-band and C-band radar interferometry onboard the Space Shuttle Endeavor. The mission covered the Earth between 60?N and 57?S and will provide interferometric digital elevation models (DEMs) of approximately 80% of the Earth's land mass when processing is complete. The radar-pointing angle was approximately 55? at scene center. Ascending and descending orbital passes generated multiple interferometric data scenes for nearly all areas. Up to eight passes of data were merged to form the final processed Shuttle Radar Topography Mission (SRTM) DEMs. The effect of merging scenes averages elevation values recorded in coincident scenes and reduces, but does not completely eliminate, the amount of area with layover and terrain shadow effects. The most significant form of data processing for the Afghanistan DEM was gap-filling areas where the SRTM data contained a data void. These void areas are as a result of radar shadow, layover, standing water, and other effects of terrain as well as technical radar interferometry phase unwrapping issues. To fill these gaps, topographic contours were digitized from 1:200,000 - scale Soviet General Staff Topographic Maps which date from the middle to late 1980's. Digital contours were gridded to form elevation models for void areas and subsequently were merged with the SRTM data through GIS and image processing techniques. The data contained in this publication includes SRTM DEM quadrangles projected and clipped in geographic coordinates for the entire country. An index of all available SRTM DEM quadrangles is displayed here: Index_Geo_DD.pdf. Also included are quadrangles projected into their appropriate Universal Transverse Mercator (UTM) projection. The country of Afghanistan spans three UTM Zones: Zone 41, Zone 42, and Zone 43. Maps are stored in their respective UTM Zone projection. Indexes of all available SRTM DEM quadrangles in their respective UTM zone are displayed here: Index_UTM_Z41.pdf, Index_UTM_Z42.pdf, Index_UTM_Z43.pdf.

Data Series

Estimating freshwater productivity, overwinter survival, and migration patterns of Klamath River Coho Salmon

An area of great importance to resource management and conservation biology in the Klamath Basin is balancing water usage against the life history requirements of threatened Coho Salmon. One tool for addressing this topic is a freshwater dynamics model to forecast Coho Salmon productivity based on environmental inputs. Constructing such a forecasting tool requires local data to quantify the unique life history processes of Coho Salmon inhabiting this region. Here, we describe analytical methods for estimating a series of sub-models, each capturing a different life history process, which will eventually be synchronized as part of a freshwater dynamics model for Klamath River Coho Salmon. Specifically, we draw upon extensive population monitoring data collected in the basin to estimate models of freshwater productivity, overwinter survival, and migration patterns. Our models of freshwater productivity indicated that high summer temperatures and high winter flows can both adversely affect smolt production and that such relationships are more likely in tributaries with naturally regulated flows due to substantial intraannual environmental variation. Our models of overwinter survival demonstrated extensive variability in survival among years, but not among rearing locations, and demonstrated that a substantial proportion (~ 20%) of age-0+ fish emigrate from some rearing sites in the winter. Our models of migration patterns indicated that many age-0+ fish redistribute in the basin during the summer and winter. Further, we observed that these redistributions can entail long migrations in the mainstem where environmental stressors likely play a role in cueing refuge entry. Finally, our models of migration patterns indicated that changes in discharge are important in cueing the seaward migration of smolts, but that the nature of this behavioral response can differ dramatically between tributaries with naturally and artificially regulated flows. Collectively, these analyses demonstrate that environmental variation interacts with most phases of the freshwater life history of Klamath River Coho Salmon and that anthropogenic environmental variation can have a particularly large bearing on productivity.

Arcata Fisheries Technical Report

2010-2015 Juvenile fish ecology in the Nisqually River Delta and Nisqually Reach Aquatic Reserve

The return of tidal inundation to over 750 acres of the U. S. Fish and Wildlife Service Billy Frank Jr. Nisqually National Wildlife Refuge (NNWR) in fall of 2009 was the crowning moment in the effort to protect and restore the Nisqually Delta. The Nisqually NWR project complemented three earlier restoration projects completed by the Nisqually Indian Tribe (Tribe) on tribal property to restore over 900 acres of the estuary, representing the largest estuary restoration project in the Pacific Northwest and one of the most significant advances to date towards the recovery of Puget Sound (USFWS 2005). In 2011 the Washington Department of Natural Resources (WADNR established the over 14000 acre Nisqually Reach Aquatic Reserve (Reserve), complementing the protection and restoration successes in the Nisqually Delta. The Reserve includes all state-owned aquatic lands around Anderson, Ketron and Eagle islands and part of McNeil Island (Figure 1, WDNR 2011). The Reserve also includes a diverse assemblage of nearshore and offshore habitats important to resident and migratory fish including federal endangered species act listed fish like Chinook salmon (Oncorynchus tshawytscha) and steelhead (O. mykiss). Studies in the Nisqually Estuary (Ellings and Hodgson 2007, David et al. 2014, Ellings et al. 2016) and South Puget Sound (Duffy 2003) have summarized fish use of the area. However, the fish ecology of the reserve had not been systematically surveyed. The Tribe, U.S. Geological Survey (USGS), NNWR, Nisqually River Foundation (NRF), and others are currently conducting a multi-year, interdisciplinary, hypothesis-based research and monitoring study investigating the impact of delta restoration on estuarine processes, habitat structures, and functions. Our interdisciplinary monitoring framework enables us to link key estuarine processes with habitat development and biological response at multiple scales across the restored footprint, reference marshes, and throughout the Nisqually Reach. Key research components include hydrology and sediment regime, channel and marsh topography and development, vegetation colonization, and invertebrate, bird, and fish abundance, habitat use, and foraging ecology. After the Reserve was established, the WDNR and the research partnership led by the Tribe expanded the existing delta fish ecology assessment to include sampling stations throughout the Reserve. The results of the Reserve fish ecology assessment provide a unique regional analysis of fish ecology from the Nisqually River to McNeil Island.

Salmon Recovery Program Technical Report

Geology and assessment of undiscovered oil and gas resources of the East Greenland Rift Basins Province, 2008

In 2007 the U.S. Geological Survey (USGS) completed an assessment of undiscovered, technically recoverable oil and gas resources in the East Greenland Rift Basins Province of Northeast Greenland. The province was selected as the prototype for the U.S. Geological Survey Circum-Arctic Resource Appraisal (CARA). In collaboration with the Geological Survey of Denmark and Greenland (GEUS), the province was subdivided into nine geologically distinctive areas. Seven of these were defined as Assessment Units (AUs), of which five were quantitatively assessed. These are: North Danmarkshavn Salt Basin, South Danmarkshavn Basin, Thetis Basin, Northeast Greenland Volcanic Province, and Liverpool Land Basin. Jameson Land Basin and the Jameson Land Basin Subvolcanic Extension were defined as AUs but were not quantitatively assessed. Onshore studies by GEUS and other organizations suggest that at least four stratigraphic intervals may contain potential source rocks for petroleum. The geological history of related areas in western Norway and burial history modeling suggest that Upper Jurassic strata are most likely to contain petroleum source rocks. A wide variety of possible trapping mechanisms are expected within the province. Potential traps in the North Danmarkshavn Salt Basin AU are dominated by structures formed through salt tectonics; those in the South Danmarkshavn Basin and the Northeast Greenland Volcanic Province are characterized by extensional structures and by stratigraphic traps in submarine fan complexes. Prospective inversion structures of Tertiary age are present along the western margin of South Danmarkshavn Basin AU, and the large horst block structures that separate the Danmarkshavn and Thetis Basins may provide numerous opportunities for traps in fault blocks and along various facies-related permeability barriers. Possible reservoirs include shallow marine to nonmarine sandstones of Middle Jurassic age, sandstones in Upper Jurassic synrift deposits, Cretaceous sandstones in submarine fan complexes, sandstones in Paleogene progradational sequences, and in Upper Carboniferous to Lower Permian warm-water carbonate sequences, especially in northern Danmarkshavn Basin. Marine shales are expected to provide the main sealing lithologies in most AUs. Most of the undiscovered oil, gas, and natural gas liquids are likely to be in the offshore areas of the province and are inferred to belong to an Upper Jurassic Composite Total Petroleum System. The USGS estimated that the East Greenland Rift Basins Province contains approximately (mean) 31,400 million barrels oil equivalent (MMBOE) of oil, natural gas, and natural gas liquids. Of the five assessed AUs, North Danmarkshavn Salt Basin and the South Danmarkshavn Basin are estimated to contain most of the undiscovered petroleum.

Professional Paper

Information resources

During recent decades, natural resources agency personnel and others involved with the management and stewardship of wildlife have experienced an increasing need to access information and obtain technical assistance for addressing a diverse array of wildlife disease issues. This Chapter provides a broad overview of selected sources for obtaining supplemental information and technical assistance for addressing wildlife disease issues in North America. Specifically, examples of existing major wildlife disease programs focusing on free-ranging wildlife populations are highlighted; training opportunities for enhancing within-agency wildlife disease response are identified; a selected reading list of wildlife disease references is provided; and selected Web sites providing timely information on wildlife disease are highlighted. No attempt is made to detail all the North American programs and capabilities that address disease in free-ranging wildlife populations. Instead, this Chapter is focused on enhancing awareness of the types of capabilities that exist as potential sources for assistance and collaboration between wildlife conservation agency personnel and others in addressing wildlife disease issues. A wide variety of entities across North America are involved in wildlife disease investigations; however, the formal assembly of multidimensional programs that primarily address disease for the benefit of free-ranging wildlife is rather limited. The Southeastern Cooperative Wildlife Disease Study (SCWDS), the National Wildlife Health Center (NWHC), and the Canadian Wildlife Health Cooperative (CWHC) are selected examples. These programs are highlighted because of the scope of their capabilities and long-term involvement in assisting State and Federal natural resource agencies combat wildlife disease. A variety of other sources for possible assistance in addressing wildlife disease issues exists throughout North America and globally. It is prudent for wildlife conservation field biologists, managers, and administrators to be aware of such local resources. Ideally, awareness and knowledge of the types of assistance those programs can provide should be obtained prior to disease crisis events since appropriate, timely intervention often is required to minimize wildlife losses from disease and prevent the establishment of new infectious diseases within wildlife populations and geographic areas. Increasing recognition of the substantial number of infectious diseases being transferred between wildlife, domestic animals, and humans has led to increased collaborative investigations between wildlife, domestic, and human health programs. That collaboration has led to a heightened focus on wildlife disease within some public health and agriculture agencies. For purposes of this Chapter, wildlife disease is narrowly defined as those diseases (infectious and noninfectious) causing morbidity and mortality in free-ranging wildlife populations. Therefore, there is no focus on the numerous fish disease or environmental contaminant programs that exist on behalf of North American fauna.

Techniques and Methods

Numerical simulation of solute transport in southwestern Salt Lake Valley, Utah

Contaminated ground water characterized by high concentrations of dissolved solids and dissolved sulfate, and in areas, by low pH and elevated concentrations of metals, is present near public-supply wells in the southwestern Salt Lake Valley. To provide State officials and water users with information concerning the potential movement of contaminated ground water to points of withdrawal in the area, an analysis of solute transport using computer models was done by the U.S. Geological Survey in cooperation with the Utah Department of Natural Resources, Division of Water Rights, and local municipalities and water users. A three-dimensional solute-transport model was developed and couples with an existing ground-water flow model of Salt Lake Valley to simulate the movement of dissolved sulfate in ground water in southwestern Salt Lake Valley. Development and calibration of the transport model focused mainly on sulfate movement down-gradient from the Bingham Creek Reservoirs and the South Jordan evaporation ponds east of the mouth of Bingham Canyon. Estimates of transport parameters were adjusted during a calibration simulation representing conditions during 1965-93. After calibration, the transport model was used to simulate future sulfate movement for 1994-2043. Because of uncertainty in estimated transport-parameter values, three projection transport simulations incorporating a range of probable parameter values were done to evaluate future sulfate movement and changes in sulfate concentrations at selected public-supply wells. These projection simulations produced a possible range of computed transport rates and patterns. In general, the projection simulations indicated movement of the sulfate plume east of the Bingham Creek reservoir toward public-supply wells northeast of the reservoirs and then eastward toward the Jordan River. Ground water with high concentrations of sulfate east of the South Jordan evaporation ponds is simulated as moving west to east under the Jordan River towards public-supply wells during the final 25 years of the simulation period. An increase in sulfate concentration from 200 mg/l in 2006 to 4,100 mg/l in 2022 was the largest simulated increase at public-supply wells northeast of the reservoirs. An increase in sulfate concentration from 150 mg/l in 2024 to 340 mg/l in 2043 was the largest simulated increase at public-supply wells in the south-central Salt Lake Valley just east of the Jordan River.

Utah

Evolution of permeability and strength recovery of shear fracture under hydrothermal conditions

Geothermal energy is a clean and renewable resource that depends on the ability to move water through hot rock. In many locations, the ability to move water through rock requires the presence of extensive natural or human-made systems of fractures. However, these fracture systems are influenced by a variety of complex processes that occur at the temperature and pressure conditions found in geothermal reservoirs. To make geothermal systems more efficient, it is important to understand how these fractures evolve over time in response to these processes. This study explored how fractures in rock change under high-temperature and pressure conditions, like those found in geothermal reservoirs, through laboratory experiments and numerical simulations. In general fractures, tend to close due to pressure from the surrounding rock preventing the flow of water. One set of laboratory experiments revealed that fractures in granitic rock can weaken over time at elevated temperatures. These weak fractures can then slip slowly potentially keeping the fracture open for a longer period. This study also showed that at the highest temperature examined (250 °C) large differences between the chemical composition of the rock and the fluid moving through it could improve water flow temporarily likely due to the water dissolving parts of the rock. Flow rate predicted by models shows overall good agreement with the flow rate measured in our experiments but with some long time-scale variations that may be due to mechanical wear of the fracture surface. A second set of experiments found that, over the temperature range examined, the closure of fractures was caused by brittle failure driven by high stresses at points where fracture surfaces were in contact. This result suggests that fracture closure in geothermal reservoirs could be counteracted by maintaining high pore pressures. Additionally, we also tested a new method using electrical resistance to measure fracture closure in controlled systems with high precision.

Final Technical Report

Hydrology of Central Florida Lakes - A Primer

INTRODUCTION Lakes are among the most valued natural resources of central Florida. The landscape of central Florida is riddled with lakeswhen viewed from the air, it almost seems there is more water than land. Florida has more naturally formed lakes than other southeastern States, where many lakes are created by building dams across streams. The abundance of lakes on the Florida peninsula is a result of the geology and geologic history of the State. An estimated 7,800 lakes in Florida are greater than 1 acre in surface area. Of these, 35 percent are located in just four counties (fig. 1): Lake, Orange, Osceola, and Polk (Hughes, 1974b). Lakes add to the aesthetic and commercial value of the area and are used by many residents and visitors for fishing, boating, swimming, and other types of outdoor recreation. Lakes also are used for other purposes such as irrigation, flood control, water supply, and navigation. Residents and visitors commonly ask questions such as Whyare there so many lakes here?, Why is my lake drying up (or flooding)?, or Is my lake spring-fed? These questions indicate that the basic hydrology of lakes and the interaction of lakes with ground water and surface water are not well understood by the general population. Because of the importance of lakes to residents of central Florida and the many questions and misconceptions about lakes, this primer was prepared by the U.S. Geological Survey (USGS) in cooperation with the St. Johns River Water Management District and the South Florida Water Management District. The USGS has been collecting hydrologic data in central Florida since the 1920s, obtaining valuable information that has been used to better understand the hydrology of the water resources of central Florida, including lakes. In addition to data collection, as of 1994, the USGS had published 66 reports and maps on central Florida lakes (Garcia and Hoy, 1995). The main purpose of this primer is to describe the hydrology of lakes in central Florida, the interactions between lakes and ground- and surface-waters, and to describe how these interactions affect lake water levels. Included are descriptions of the basic geology and geomorphology of central Florida, origins of central Florida lakes, factors that affect lake water levels, lake water quality, and common methods of improving water quality. The geographic area discussed in this primer is approximate (fig. 1) and includes west and east-central Florida, extending from the Gulf of Mexico to the Atlantic Ocean coastlines, northward into Marion, Putnam, and Flagler Counties, and southward to Lake Okeechobee. The information presented here was obtained from the many publications available on lakes in central Florida, as well as from publications on Florida geology, hydrology, and primers on ground water, surface water, and water quality. Many publications are available that provide more detailed information on lake water quality, and this primer is not intended as an extensive treatise on that subject. The reader is referred to the reference section of this primer for sources of more detailed information on lake water quality. Lakes discussed in this report are identified in figure 2. Technical terms used in the report are shown in bold italics and are defined in the glossary. The classification of some water bodies as lakes is highly subjective. What one individual considers a lake another might consider a pond. Generally, any water- filled depression or group of depressions in the land surface could be considered a lake. Lakes differ from swamps or wetlands in the type and amount of vegetation, water depth, and some water-quality characteristics. Lakes typically have emergent vegetation along the shoreline with a large expanse of open water in the center. Swamps or wetlands, on the other hand, are characterized by a water surface interrupted by the emergence of many varieties of plant life, from saw grasses to cypress trees. Lakes may be na

Circular

Brookian structural plays in the National Petroleum Reserve, Alaska

As part of the U.S. Geological Survey assessment of undiscovered oil and gas resources in the National Petroleum Reserve-Alaska (NPRA), two structural plays were assessed in thrust-faulted and folded Upper Cretaceous rocks of the Brookian megasequence. These are the Brookian Topset Structural Play and the Torok Structural Play, located in the Brooks Range foothills and the southern part of the coastal plain, within the Tertiary-age frontal part of the Jurassic to Tertiary Brooks Range orogenic belt. A new regional structural interpretation, developed through regional seismic analyses, reconnaissance field investigations, and new thermal constraints, guided the geologic evaluation and risking of these plays. Volumetric parameters were derived from seismic reflection data, well data and oil and gas field analogs. The fundamental elements of the Brookian Topset Structural Play, exemplified by the undeveloped Umiat oil field, include: (1) reservoirs in Nanushuk Group and uppermost Torok Formation shallow-marine to nonmarine sandstones draped over anticlines caused by structural thickening in underlying Torok mudstones; (2) seals provided by overlying shale drapes in the Nanushuk, and locally by thrust faults; (3) Torok, gamma-ray-zone (GRZ) or pebble shale source rocks; (4) remigration of hydrocarbons from early formed (Late Cretaceous) stratigraphic traps disrupted by 60 Ma thrusting, into newly formed structural traps. The 60 Ma thrusting was probably accompanied by new generation and migration of natural gas resulting from late structural thickening and tectonic loading. Subsurface data from the Umiat field and other seismic reflection data within the play area indicate that the structural traps are commonly compartmentalized by thrust faults. The fundamental elements of the Torok Structural Play, exemplified by the undeveloped East Kurupa gas accumulation just south of NPRA, include: (1) reservoirs in lower Torok Formation basin-floor sandstones, and perhaps in small sandstone bodies intercalated with middle to upper Torok mudstones; (2) structural traps provided by folded sandstone bodies above thrust faults within a pervasively deformed passive-roof duplex beneath the foothills and a less-strongly deformed domain to the north; (3) seals provided by Torok mudstone, both stratigraphically above the sandstone bodies and smeared along bounding thrust faults; (4) Torok, GRZ, pebble shale, or Kingak Shale source rocks; (5) a migration and charging scenario similar to that of the Brookian Topset Structural Play. According to our estimates, the Brookian Topset Structural Play contains 137 million barrels of technically recoverable oil and 10.6 trillion cubic feet (TCF) of technically recoverable, non-associated natural gas, with both values representing the mean estimate (expected value). The Torok Structural Play contains about 35 million barrels of technically recoverable oil and 17.9 TCF of technically recoverable, nonassociated natural gas.

Open-File Report

Prefabricated Zero Ascend Omnispecies (ZAO) modular fish passage modules using advanced manufacturing techniques

The Zero Ascend Omnispecies (ZAO) fish passage attraction module “ZAO Attractor” is a novel system designed to facilitate upstream passage for a broad spectrum of fish species, with a particular focus on American shad and river herring (alewife and/or blueback herring). Combining the use of prefabricated, modular components with advanced manufacturing, the ZAO aims to provide a cost-effective and scalable solution for fish passage attractions across various hydropower sites. The system features a surface level entry, so fish do not need to climb. In addition, it is designed to be adjusted and repositioned to create the most effective attraction flows by managing the outflows from hydropower turbines. Budget Period 1 (BP1) focused on the design and modeling of the ZAO Attractor and demonstrated the engineering feasibility of a modular, prefabricated, hydrodynamically efficient structure with surface level entry and passage. During BP1, the hypothesis was that certain structural adaptations, such as the addition of long fins, could direct turbine outflows to create a desirable downstream flow. Simulations, however, were inconclusive, revealing the complex nature of fish preferences for hydraulic conditions. It was discovered that there were limited published studies on the direct correlation between quantified flow patterns and fish attraction, emphasizing the need for controlled studies to observe and measure these effects. In Budget Period 2 (BP2), controlled studies with live fish were prioritized to address these complexities. A partially scaled ZAO Attractor was evaluated in laboratory conditions using native river water to assess its capability to attract and guide fish. Despite challenges with flume flow conditions and the impact of flume dimensions on flow directionality and velocity, the studies provided insights into fish behavior and preferences, particularly the requirement for a consistent flow stream for migration cues. Adjustments to the fin structure demonstrated potential effectiveness in guiding fish toward the module. However, the hydraulic conditions within the flume environment did not accurately reflect typical in-river scenarios, therefore the results were inconclusive with respect to the optimal system configuration for in-river use. In the future, conducting comprehensive field studies can enhance understanding of the interactions between fish behavior and flow conditions created by the ZAO Attractor. Additionally, a design review is advised, particularly regarding the load scenarios throughout the seasons and positioning of the ZAO Attractor. These studies should continue to refine the design to achieve its intended benefits: economical and effective fish attraction and passage that can be adapted to specific site conditions while allowing for continued energy generation at sites up for re-licensure and adding hydropower generation to previously untapped resources in non-powered dams and new stream reaches. In conclusion, the ZAO fish passage attraction module presents a promising approach to fish passage at hydropower stations, with the potential to balance environmental concerns with renewable energy development. However, further field validation and optimization are necessary to ensure its effectiveness and practicality in real-world applications.

Final Technical Report

Surface-water-quality assessment of the upper Illinois River basin in Illinois, Indiana, and Wisconsin; project description

In 1986, the U.S. Geological Survey began a National Water-Quality Assessment program to (1) provide nationally consistent descriptions of the current status of water quality for a large, diverse, and geographically distributed part of the Nation's surface- and ground-water resources; (2) define, where possible, trends in water quality; and (3) identify and describe the relations of both status and trends in water quality to natural factors and the history of land use and land- and waste-management activities. The program is presently in a pilot phase that will test and modify, as necessary, concepts and approaches in preparation for possible full implementation of the program in the future. The upper Illinois River basin is one of four basins selected to test the concepts and approaches of the surface-water-quality element of the national program. The basin drains 10,949 square miles of Illinois, Indiana, and Wisconsin. Three principal tributaries are the Kankakee and Des Plaines Rivers that join to form the Illinois River and the Fox River. Land use is predominantly agricultural; about 75 percent of the basin is cultivated primarily for production of corn and soybeans. About 13 percent of the basin is urban area, most of which is located in the Chicago metropolitan area. The population of the basin is about 7 million. About 6 million people live in the Des Plaines River basin. Many water-quality issues in the upper Illinois River basin are related to sediment, nutrients, potentially toxic inorganic and organic constituents, and to water-management practices. Occurrence of sediment and the chemical constituents in the rivers and lakes within the basin has the potential to adversely affect the water's suitability for aquatic life, recreation, or, through the consumption of fish, human health. The upper Illinois River basin project consists of five major activities. The first activity--analysis of existing information and preparation of a report that describes recent water-quality conditions and trends--is currently underway. The second activity--fixed-station water-quality sampling at eight stations--began in April 1987 and will last at least 3 years. Water-quality data collected at these stations will be used to determine the frequency of occurrence of constituent concentrations, their annual and seasonal loads, and time trends in concentrations for a selected number of constituents. The third activity will be synoptic water-quality studies. Each study will involve sampling many sites at specific flow conditions and for selected water-quality constituents. Information gained from these studies will supplement informa tion gained from fixed-station sampling. A synoptic study of streambed sediments is tentatively planned for the summer of 1987 to describe the occurrence and distribution of trace elements in the basin. The fourth activity will consist of one or more topical subbasin or river-reach studies. The purpose of such studies is to better define certain water-quality conditions in specific areas and gain an understanding of the processes affecting the observed conditions. The fifth activity is the preparation of reports that will describe results from each of the first four activities. Quality assurance and coordination are being provided at both the national and pilot-project levels. A technical quality-assurance plan that addresses all aspects of sample collection, analysis, and reporting is being prepared at the national level. This plan will be appended as needed at the pilot-project level. A National Coordinating Work Group that functions under the auspices of the Interagency Advisory Committee on Water Data and the Advisory Committee on Water Data for Public Use has been established at the national level. A local liaison committee consisting of representatives from Federal, State, and local agencies has been established to enhance communication and to ensure that the scientific information produced by the

Open-File Report

Proceedings of the Fourth Glacier Bay Science Symposium

Foreword Glacier Bay was established as a National Monument in 1925, in part to protect its unique character and natural beauty, but also to create a natural laboratory to examine evolution of the glacial landscape. Today, Glacier Bay National Park and Preserve is still a place of profound natural beauty and dynamic landscapes. It also remains a focal point for scientific research and includes continuing observations begun decades ago of glacial processes and terrestrial ecosystems. In recent years, research has focused on glacial-marine interactions and ecosystem processes that occur below the surface of the bay. In October 2004, Glacier Bay National Park convened the fourth in a series of science symposiums to provide an opportunity for researchers, managers, interpreters, educators, students and the general public to share knowledge about Glacier Bay. The Fourth Glacier Bay Science Symposium was held in Juneau, Alaska, rather than at the Park, reflecting a desire to maximize attendance and communication among a growing and diverse number of stakeholders interested in science in the park. More than 400 people attended the symposium. Participants provided 46 oral presentations and 41 posters covering a wide array of disciplines including geology, glaciology, oceanography, wildlife and fisheries biology, terrestrial and marine ecology, socio-cultural research and management issues. A panel discussion focused on the importance of connectivity in Glacier Bay research, and keynote speakers (Gary Davis and Terry Chapin) spoke of long-term monitoring and ecological processes. These proceedings include 56 papers from the symposium. A summary of the Glacier Bay Science Plan-itself a subject of a meeting during the symposium and the result of ongoing discussions between scientists and resource managers-also is provided. We hope these proceedings illustrate the diversity of completed and ongoing scientific studies, conducted within the Park. To this end, we invited all presenters to submit brief technical summaries of their work, to capture the gist of their study and its main findings without an overload of details and methodology. We also asked authors to include a few words on the management implications of their work to help bridge the gap between scientists and managers in understanding how specific research questions may translate to management practice. Papers in this volume are laid out by subject matter, from terrestrial and freshwater subjects to glacial-marine geology, to the ecology of marine animals and ending with risk assessment, human impacts and science-management considerations. In summary, we hope the proceedings will serve as a useful reference to completed and ongoing studies in Glacier Bay National Park, and thereby provide park enthusiasts, scientists, and managers with a road map of scientific progress.

Scientific Investigations Report

Detection of underground voids in Ohio by use of geophysical methods

Geophysical methods are generally classified as electrical, potential field, and seismic methods. Each method type relies on contrasts of physical properties in the subsurface. Forward models based on the physical properties of air- and water-filled voids within common geologic materials indicate that several geophysical methods are technically feasible for detection of subsurface voids in Ohio, but ease of use and interpretation varies widely between the methods. Ground-penetrating radar is the most rapid and cost-effective method for collection of subsurface data in areas associated with voids under roadways. Electrical resistivity, gravity, or seismic reflection methods have applications for direct delineation of voids, but data-collection and analytical procedures are more time consuming. Electrical resistivity, electromagnetic, or magnetic methods may be useful in locating areas where conductive material, such as rail lines, are present in abandoned underground coal mines. Other electrical methods include spontaneous potential and very low frequency (VLF); these latter two methods are considered unlikely candidates for locating underground voids in Ohio. Results of ground-penetrating radar surveys at three highway sites indicate that subsurface penetration varies widely with geologic material type and amount of cultural interference. Two highway sites were chosen over abandoned underground coal mines in eastern Ohio. A third site in western Ohio was chosen in an area known to be underlain by naturally occurring voids in lime stone. Ground-penetrating radar surveys at Interstate 470, in Belmont County, Ohio, indicate subsurface penetration of less than 15 feet over a mined coal seam that was known to vary in depth from 0 to 40 feet. Although no direct observations of voids were made, anomalous areas that may be related to collapse structures above voids were indicated. Cultural interference dominated the radar records at Interstate 70, Guernsey County, Ohio, where coal was mined under the site at a depth of about 50 feet. Interference from overhead powerlines, the field vehicle, and guardrails complicated an interpretation of the radar records where the depth of penetration was estimated to be less than 5 feet. Along State Route 33, in Logan County, Ohio, bedding planes and structures possibly associated with dissolution of limestone were profiled with ground-penetrating radar. Depth of penetration was estimated to be greater than 50 feet.

Water-Resources Investigations Report

Seventy-five years of science—The U.S. Geological Survey’s Western Fisheries Research Center

As of January 2010, 75 years have elapsed since Dr. Frederic Fish initiated the pioneering research program that would evolve into today’s Western Fisheries Research Center (WFRC). Fish began his research working alone in the basement of the recently opened Fisheries Biological Laboratory on Lake Union in Seattle, Washington. WFRC’s research began under the aegis of the U.S. Fish and Wildlife Service and ends its first 75 years as part of the U.S. Geological Survey with a staff of more than 150 biologists and support personnel and a heritage of fundamental research that has made important contributions to our understanding of the biology and ecology of the economically important fish and fish populations of the Nation. Although the current staff may rarely stop to think about it, WFRC’s antecedents extend many years into the past and are intimately involved with the history of fisheries conservation in the Western United States. Thus, WFRC Director Lyman Thorsteinson asked me to write the story of this laboratory “while there are still a few of you around who were here for some of the earlier years” to document the rich history and culture of WFRC by recognizing its many famous scientists and their achievements. This historyalso would help document WFRC’s research ‘footprint’ in the Western United States and its strategic directions. Center Director Thorsteinson concluded that WFRC’s heritage told by an emeritus scientist also would add a texture of legitimacy based on personal knowledge that will all-to-soon be lost to the WFRC and to the USGS. The WFRC story is important for the future as well as for historical reasons. It describes how we got to the place we are today by documenting the origin, original mission, and our evolving role in response to the constantly changing technical information requirements of new environmental legislation and organizational decision-making. The WFRC research program owes its existence to the policy requirements of Federal conservation legislation originating with the construction of Grand Coulee Dam in 1933. The research program was shaped by laws enacted in subsequent years such as the Federal Water Pollution Control Act (1972), National Environmental Policy Act (1973), Endangered Species Act (1974), and Northwest Power Planning Act (1980), to name only a few. The WFRC has not been constrained by direct management or regulatory responsibility for a particular fishery (such as providing sustainable catch limits data to a resource management structure). Thus, WFRC has been able to concentrate on scientific pursuits and information needs required by contemporary environmental legislation. Over the years, we have pioneered in several important areas of fisheries research including the diagnoses and control of diseases in economically important fish, effects of environmental alterations on the physiological quality and survival of Pacific salmon released from federal mitigation hatcheries, applications in biotelemetry, and the bioenergetics of predator-prey interactions in the Columbia River. The WFRC of today is a widely distributed organization in the Western United States. Knowledge of the historical connections and accomplishments of our predecessors is important beyond the sense of pride and unity it instills in the WFRC family of today. For example, a discerning reader will note the evolution of WFRC’s research from a single disciplinary focus (early era—hatchery disease problems), to multiple disciplines (middle to late era—species, populations, habitats; threatened and endangered species), to the present era (multidisciplinary and with increasing process focus). For the benefit of the current WFRC staff, more emphasis has been placed on the early years rather than on the present day because people are quite naturally more familiar with the recent past than with the research done during the first decades of WFRC’s existence. By every rational measure, the WFRC has evolved into a fisheries research organization well positioned to provide the biological information needed to support the continued conservation and management of our Nation’s living aquatic natural resources. The high standard of excellence that connects WFRC’s past to our present research program provides a firm foundation on which to base the work yet to be done. In another 75 years, WFRC will undoubtedly be a very different place than it is today, but its evolution will be forever rooted in the story of the research and of the people related here. More about the diverse fisheries research projects WFRC scientists are conducting today is available at WFRC’s website: http://wfrc.usgs.gov/.

Washington

Beaufortian stratigraphic plays in the National Petroleum Reserve - Alaska (NPRA)

The Beaufortian megasequence in the National Petroleum Reserve in Alaska (NPRA) includes Jurassic through lower Cretaceous (Neocomian) strata of the Kingak Shale and the overlying pebble shale unit. These strata are part of a composite total petroleum system involving hydrocarbons expelled from source rocks in three stratigraphic intervals, the Lower Jurassic part of the Kingak Shale, the Triassic Shublik Formation, and the Lower Cretaceous gamma-ray zone (GRZ) and associated strata. The potential for undiscovered oil and gas resources in the Beaufortian megasequence in NPRA was assessed by defining eight plays (assessment units), two in lower Cretaceous (Neocomian) topset seismic facies, four in Upper Jurassic topset seismic facies, one in Lower Jurassic topset seismic facies, and one in Jurassic through lower Cretaceous (Neocomian) clinoform seismic facies. The Beaufortian Cretaceous Topset North Play is estimated to contain between 0 (95-percent probability) and 239 (5-percent probability) million barrels of technically recoverable oil, with a mean (expected value) of 103 million barrels. The Beaufortian Cretaceous Topset North Play is estimated to contain between 0 (95-percent probability) and 1,162 (5-percent probability) billion cubic feet of technically recoverable, nonassociated natural gas, with a mean (expected value) of 405 billion cubic feet. The Beaufortian Cretaceous Topset South Play is estimated to contain between 635 (95-percent probability) and 4,004 (5-percent probability) billion cubic feet of technically recoverable, nonassociated natural gas, with a mean (expected value) of 2,130 billion cubic feet. No technically recoverable oil is assessed in the Beaufortian Cretaceous Topset South Play, as it lies at depths that are entirely in the gas window. The Beaufortian Upper Jurassic Topset Northeast Play is estimated to contain between 2,744 (95-percent probability) and 8,086 (5-percent probability) million barrels of technically recoverable oil, with a mean (expected value) of 5,176 million barrels. No technically recoverable gas is assessed in the Beaufortian Upper Jurassic Topset Northeast Play. The Beaufortian Upper Jurassic Topset Northwest Play is estimated to contain between 733 (95-percent probability) and 3,312 (5-percent probability) million barrels of technically recoverable oil, with a mean (expected value) of 1,859 million barrels. No technically recoverable gas is assessed in the Beaufortian Upper Jurassic Topset Northwest Play. The Beaufortian Upper Jurassic Topset Southeast Play is estimated to contain between 2,053 (95-percent probability) and 9,030 (5-percent probability) billion cubic feet of technically recoverable, nonassociated natural gas, with a mean (expected value) of 5,137 billion cubic feet. No technically recoverable oil is assessed in the Beaufortian Upper Jurassic Topset Southeast Play, as it lies at depths that are entirely in the gas window. The Beaufortian Upper Jurassic Topset Southwest Play is estimated to contain between 2,008 (95-percent probability) and 9,265 (5-percent probability) billion cubic feet of technically recoverable, nonassociated natural gas, with a mean (expected value) of 5,220 billion cubic feet. No technically recoverable oil is assessed in the Beaufortian Upper Jurassic Topset Southwest Play, as it lies at depths that are entirely in the gas window. The Beaufortian Lower Jurassic Topset Play is estimated to contain between 0 (95-percent probability) and 210 (5-percent probability) million barrels of technically recoverable oil, with a mean (expected value) of 83 million barrels. The Beaufortian Lower Jurassic Topset Play is estimated to contain between 0 (95-percent probability) and 1,915 (5-percent probability) billion cubic feet of technically recoverable, nonassociated natural gas, with a mean (expected value) of 793 billion cubic feet. The Beaufortian Clinoform Play is estimated to contain between 0 (95-percent probability)

Open-File Report

Brookian stratigraphic plays in the National Petroleum Reserve - Alaska (NPRA)

The Brookian megasequence in the National Petroleum Reserve in Alaska (NPRA) includes bottomset and clinoform seismic facies of the Torok Formation (mostly Albian age) and generally coeval, topset seismic facies of the uppermost Torok Formation and the Nanushuk Group. These strata are part of a composite total petroleum system involving hydrocarbons expelled from three stratigraphic intervals of source rocks, the Lower Cretaceous gamma-ray zone (GRZ), the Lower Jurassic Kingak Shale, and the Triassic Shublik Formation. The potential for undiscovered oil and gas resources in the Brookian megasequence in NPRA was assessed by defining five plays (assessment units), one in the topset seismic facies and four in the bottomset-clinoform seismic facies. The Brookian Topset Play is estimated to contain between 60 (95-percent probability) and 465 (5-percent probability) million barrels of technically recoverable oil, with a mean (expected value) of 239 million barrels. The Brookian Topset Play is estimated to contain between 0 (95-percent probability) and 679 (5-percent probability) billion cubic feet of technically recoverable, nonassociated natural gas, with a mean (expected value) of 192 billion cubic feet. The Brookian Clinoform North Play, which extends across northern NPRA, is estimated to contain between 538 (95-percent probability) and 2,257 (5-percent probability) million barrels of technically recoverable oil, with a mean (expected value) of 1,306 million barrels. The Brookian Clinoform North Play is estimated to contain between 0 (95-percent probability) and 1,969 (5-percent probability) billion cubic feet of technically recoverable, nonassociated natural gas, with a mean (expected value) of 674 billion cubic feet. The Brookian Clinoform Central Play, which extends across central NPRA, is estimated to contain between 299 (95-percent probability) and 1,849 (5-percent probability) million barrels of technically recoverable oil, with a mean (expected value) of 973 million barrels. The Brookian Clinoform Central Play is estimated to contain between 1,806 (95-percent probability) and 10,076 (5-percent probability) billion cubic feet of technically recoverable, nonassociated natural gas, with a mean (expected value) of 5,405 billion cubic feet. The Brookian Clinoform South-Shallow Play is estimated to contain between 0 (95-percent probability) and 1,254 (5-percent probability) million barrels of technically recoverable oil, with a mean (expected value) of 508 million barrels. The Brookian Clinoform South-Shallow Play is estimated to contain between 0 (95-percent probability) and 5,809 (5-percent probability) billion cubic feet of technically recoverable, nonassociated natural gas, with a mean (expected value) of 2,405 billion cubic feet. The Brookian Clinoform South-Deep Play is estimated to contain between 0 (95-percent probability) and 8,796 (5-percent probability) billion cubic feet of technically recoverable, nonassociated natural gas, with a mean (expected value) of 3,788 billion cubic feet. No technically recoverable oil is assessed in the Brookian Clinoform South-Deep Play, as it lies at depths that are entirely in the gas window. Among the Brookian stratigraphic plays in NPRA, the Brookian Clinoform North Play and the Brookian Clinoform Central Play are most likely to be objectives of exploration activity in the near-term future because they are estimated to contain multiple oil accumulations larger than 128 million barrels technically recoverable oil, and because some of those accumulations may occur near existing infrastructure in the eastern parts of the plays. The other Brookian stratigraphic plays are not likely to be the focus of exploration activity because they are estimated to contain maximum accumulation sizes that are smaller, but they may be an objective of satellite exploration if infrastructure is extended into the play areas. The total volumes of natural gas estimated to occur in B

Open-File Report